AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0573970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0573970 MtrunA17_Chr8g0390251 85.000 320 10 2 1 283 1 319 0.0 536
Msa0573970 MtrunA17_Chr8g0390251 34.746 118 40 1 87 167 216 333 3.32e-13 68.9
Msa0573970 MtrunA17_Chr6g0486631 59.091 308 86 2 13 283 16 320 8.92e-130 372
Msa0573970 MtrunA17_Chr6g0486631 38.136 118 36 1 87 167 217 334 5.23e-15 74.3
Msa0573970 MtrunA17_Chr3g0140091 54.882 297 91 3 24 283 32 322 1.27e-106 313
Msa0573970 MtrunA17_Chr3g0140091 28.191 188 89 4 27 172 158 341 3.90e-14 71.6
Msa0573970 MtrunA17_Chr2g0288571 60.392 255 60 2 70 283 5 259 9.60e-104 304
Msa0573970 MtrunA17_Chr2g0288571 32.283 127 45 2 87 172 152 278 2.00e-11 63.2
Msa0573970 MtrunA17_Chr4g0075021 57.661 248 64 2 77 283 7 254 1.10e-95 283
Msa0573970 MtrunA17_Chr4g0019621 64.216 204 67 2 80 283 23 220 2.65e-85 255
Msa0573970 MtrunA17_Chr4g0019621 50.575 87 43 0 196 282 8 94 6.42e-23 94.7
Msa0573970 MtrunA17_Chr4g0019621 29.670 182 89 4 27 172 61 239 4.97e-15 73.2
Msa0573970 MtrunA17_Chr4g0075001 65.000 180 59 1 108 283 58 237 3.37e-81 246
Msa0573970 MtrunA17_Chr4g0075001 51.724 87 42 0 196 282 16 102 4.68e-23 95.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0573970 AT1G67280.1 65.231 325 68 3 1 283 1 322 3.68e-147 417
Msa0573970 AT1G67280.1 38.136 118 36 1 87 167 219 336 1.15e-14 73.6
Msa0573970 AT1G67280.2 74.678 233 22 1 87 282 1 233 3.98e-121 347
Msa0573970 AT1G67280.2 38.983 118 35 2 87 167 131 248 3.13e-14 71.2
Msa0573970 AT1G11840.6 55.789 285 82 3 43 283 10 294 4.32e-103 304
Msa0573970 AT1G11840.4 59.449 254 62 2 71 283 2 255 6.72e-102 299
Msa0573970 AT1G11840.1 59.449 254 62 2 71 283 2 255 6.72e-102 299
Msa0573970 AT1G11840.3 59.449 254 62 2 71 283 2 255 6.72e-102 299
Msa0573970 AT1G11840.2 59.449 254 62 2 71 283 2 255 6.72e-102 299
Msa0573970 AT1G11840.5 58.716 218 53 1 71 251 2 219 1.19e-86 259
Msa0573970 AT1G11840.5 53.398 103 48 0 180 282 18 120 9.00e-32 118

Find 73 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGGAGTAGAAGAGTATTT+AGG 0.260004 4_1:+77306267 Msa0573970:three_prime_UTR
TTGCCTGCCATTTAGGCTTT+TGG 0.265110 4_1:+77303573 Msa0573970:intron
CTGGAGTTGACTTACAATTA+TGG 0.281726 4_1:+77303886 Msa0573970:CDS
TGTAGATTATTCAGACAAAA+TGG 0.283756 4_1:+77301962 Msa0573970:CDS
TGGTTACAAATTTGAACTTT+TGG 0.294255 4_1:+77303387 Msa0573970:CDS
AAAATGAGAGAAAGAGATTC+GGG 0.301627 4_1:-77301764 None:intergenic
GGAACTGCATTTGGCCATTT+CGG 0.315598 4_1:+77303033 Msa0573970:CDS
AAGCTTTCAAGCCAAAACTA+TGG 0.324658 4_1:-77301940 None:intergenic
TATGATATTGGAACTGCATT+TGG 0.333699 4_1:+77303024 Msa0573970:CDS
GGAGTTGATAAATATGATAT+TGG 0.334496 4_1:+77303012 Msa0573970:CDS
CTATAGACATACCAATTCTT+TGG 0.335138 4_1:-77306336 None:intergenic
TTATTCAATATATTGTTTGA+TGG 0.343878 4_1:+77306512 Msa0573970:three_prime_UTR
TCTCTGAAAGTGATGTCATC+TGG 0.362649 4_1:+77301989 Msa0573970:CDS
GTTTCACAAACCCATAGTTT+TGG 0.387946 4_1:+77301929 Msa0573970:CDS
CCCACTTTACAGATTGCAAT+AGG 0.402860 4_1:+77304168 Msa0573970:intron
GGAAATAGTACCTTGTTGTC+TGG 0.415086 4_1:-77303624 None:intergenic
GGAGTCACTGAATATGATAA+AGG 0.416787 4_1:+77303907 Msa0573970:CDS
ATCAGAAAATGTACTGGAAT+GGG 0.426693 4_1:+77302042 Msa0573970:CDS
TTGCCTCCTTTGACAGGACC+AGG 0.434438 4_1:-77303334 None:intergenic
ACCATAGCAATGCTTGGTTA+TGG 0.437587 4_1:+77303841 Msa0573970:CDS
TATCCACGGGAAAGCTTACT+CGG 0.440866 4_1:+77304229 Msa0573970:CDS
CGTGGATAGTTTAATCGCTT+CGG 0.444321 4_1:-77304214 None:intergenic
CGGGAACCTGGACCATTGCC+TGG 0.446245 4_1:+77304249 Msa0573970:CDS
TCAAACGTCTGCCAAAGAAT+TGG 0.446519 4_1:+77306325 Msa0573970:three_prime_UTR
AGTTCAAATTTGTAACCATC+AGG 0.449931 4_1:-77303382 None:intergenic
GCGATTAAAGAGAGAAAGAG+TGG 0.456588 4_1:-77301737 None:intergenic
GGAAAGCTTACTCGGGAACC+TGG 0.467387 4_1:+77304237 Msa0573970:CDS
TGTTTATCGTGTTGGTGACT+TGG 0.472187 4_1:+77302096 Msa0573970:CDS
CTCTGAAAGTGATGTCATCT+GGG 0.476068 4_1:+77301990 Msa0573970:CDS
ATCACTTGGCACAATGGCTC+GGG 0.479897 4_1:-77303424 None:intergenic
CTTCATGTTGTTTATCGTGT+TGG 0.480854 4_1:+77302088 Msa0573970:CDS
GAGCACAAGAAAAGAAAGAA+AGG 0.481462 4_1:-77301601 None:intergenic
CATCAGAAAATGTACTGGAA+TGG 0.481686 4_1:+77302041 Msa0573970:CDS
AGAAGATAAAACGACTGTTC+TGG 0.483579 4_1:+77303867 Msa0573970:CDS
CATCAACAGCAATACCGAAA+TGG 0.487202 4_1:-77303047 None:intergenic
TTGGCACAATGGCTCGGGAG+TGG 0.498981 4_1:-77303419 None:intergenic
AGCTTTCAAGCCAAAACTAT+GGG 0.500650 4_1:-77301939 None:intergenic
CATCACTTGGCACAATGGCT+CGG 0.503234 4_1:-77303425 None:intergenic
TGGCACAATGGCTCGGGAGT+GGG 0.512754 4_1:-77303418 None:intergenic
TTGATACCAGGCAATGGTCC+AGG 0.512839 4_1:-77304255 None:intergenic
GTGGAACTAATAAGAGCTAA+AGG 0.527668 4_1:+77303292 Msa0573970:CDS
CACCCACTCGAAGCATCACT+TGG 0.531180 4_1:-77303438 None:intergenic
TCTCATAAAATTCAATTGAA+CGG 0.539116 4_1:-77303468 None:intergenic
GAGTAGAAGAGTATTTAGGT+AGG 0.545659 4_1:+77306271 Msa0573970:three_prime_UTR
TAAAGGAAATGCTTATGCTC+AGG 0.546983 4_1:+77303924 Msa0573970:CDS
CGATTAAAGAGAGAAAGAGT+GGG 0.553443 4_1:-77301736 None:intergenic
TGCTTCATCAGAAAATGTAC+TGG 0.554972 4_1:+77302036 Msa0573970:CDS
CAAGAAAAGAAAGAAAGGAA+TGG 0.559898 4_1:-77301596 None:intergenic
AGAGAGCCTGGTCCTGTCAA+AGG 0.574783 4_1:+77303328 Msa0573970:CDS
CGAAGCATCACTTGGCACAA+TGG 0.575077 4_1:-77303430 None:intergenic
CTCTCACCATAGCTTTGAGT+CGG 0.577829 4_1:-77301684 None:intergenic
GTATGGAGCTGCTTCGTACG+CGG 0.578040 4_1:+77303595 Msa0573970:CDS
CAGTATACCATAGCAATGCT+TGG 0.579257 4_1:+77303835 Msa0573970:intron
ACCATAACCAAGCATTGCTA+TGG 0.580026 4_1:-77303842 None:intergenic
ACAAATGCTAGAACAGCGTA+GGG 0.590643 4_1:+77306432 Msa0573970:three_prime_UTR
TTCCCGAGTAAGCTTTCCCG+TGG 0.591304 4_1:-77304232 None:intergenic
AACAAATGCTAGAACAGCGT+AGG 0.602642 4_1:+77306431 Msa0573970:three_prime_UTR
GCATTTGTTGAAGATCCTGA+TGG 0.602821 4_1:+77303367 Msa0573970:CDS
TGTGAAGTGTGAGTGAGTGA+AGG 0.603837 4_1:-77301654 None:intergenic
TTTGTGTTGATACCAGGCAA+TGG 0.616817 4_1:-77304261 None:intergenic
TCATCACCGACTCAAAGCTA+TGG 0.618570 4_1:+77301678 Msa0573970:exon
GAAGCGATTAAACTATCCAC+GGG 0.618591 4_1:+77304216 Msa0573970:CDS
TATGGAGCTGCTTCGTACGC+GGG 0.624392 4_1:+77303596 Msa0573970:CDS
CGAAGCGATTAAACTATCCA+CGG 0.624980 4_1:+77304215 Msa0573970:CDS
GTGCCAAGTGATGCTTCGAG+TGG 0.647147 4_1:+77303435 Msa0573970:CDS
GAGCCTGGTCCTGTCAAAGG+AGG 0.647264 4_1:+77303331 Msa0573970:CDS
ATCCACGGGAAAGCTTACTC+GGG 0.647863 4_1:+77304230 Msa0573970:CDS
GAACTAATAAGAGCTAAAGG+TGG 0.648075 4_1:+77303295 Msa0573970:CDS
AGTGAGTGAAGGAAGTGTTG+TGG 0.653197 4_1:-77301643 None:intergenic
TGGATGATGAACTATGTATG+AGG 0.653626 4_1:-77301623 None:intergenic
TGCCAAGTGATGCTTCGAGT+GGG 0.680292 4_1:+77303436 Msa0573970:CDS
GCGGGATAATCCAGACAACA+AGG 0.682899 4_1:+77303614 Msa0573970:CDS
AAATGAGAGAAAGAGATTCG+GGG 0.711378 4_1:-77301763 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAATTAGTTC+AGG - chr4_1:77301887-77301906 None:intergenic 10.0%
!!! TCATATTCAATTTATTATTT+TGG + chr4_1:77302150-77302169 Msa0573970:intron 10.0%
!! TCTTTATTATTTATCAAAAT+AGG - chr4_1:77302440-77302459 None:intergenic 10.0%
!! AAGTAATATTATGTATAAAT+AGG - chr4_1:77305439-77305458 None:intergenic 10.0%
!!! TTTTTGTATATAAAAGAATG+AGG + chr4_1:77304490-77304509 Msa0573970:intron 15.0%
!!! CTTTTACTTCATATTTTATT+TGG + chr4_1:77305009-77305028 Msa0573970:intron 15.0%
!!! TTTACTTTGAAATCTTATTT+TGG + chr4_1:77305606-77305625 Msa0573970:intron 15.0%
!!! AGATAATATTGATTTTCTAA+AGG + chr4_1:77306243-77306262 Msa0573970:exon 15.0%
!! TTATTCAATATATTGTTTGA+TGG + chr4_1:77306512-77306531 Msa0573970:three_prime_UTR 15.0%
!! TAAGCATTTCTATAGAAATA+AGG + chr4_1:77302373-77302392 Msa0573970:intron 20.0%
!!! CTTATTTTCATAAACTCTTT+AGG - chr4_1:77302517-77302536 None:intergenic 20.0%
!! TGAAGAACTATAAACTTAAT+TGG + chr4_1:77302807-77302826 Msa0573970:intron 20.0%
!! AATAATTCTAACATCTTAAG+AGG - chr4_1:77302900-77302919 None:intergenic 20.0%
!! CATTTAACAATATCAGATTA+CGG + chr4_1:77302991-77303010 Msa0573970:intron 20.0%
!!! TTCTGTTTTTGTCATTATTT+AGG + chr4_1:77303189-77303208 Msa0573970:intron 20.0%
!! TTATTAGATTACAAAAACAG+TGG + chr4_1:77303273-77303292 Msa0573970:intron 20.0%
!! TCTCATAAAATTCAATTGAA+CGG - chr4_1:77303471-77303490 None:intergenic 20.0%
!!! TTCAATTGAATTTTATGAGA+AGG + chr4_1:77303471-77303490 Msa0573970:CDS 20.0%
!! AAAACATTAAATCAATTACG+TGG + chr4_1:77303550-77303569 Msa0573970:intron 20.0%
!! TAAAATATGAAGTAAAAGCA+AGG - chr4_1:77305007-77305026 None:intergenic 20.0%
!!! TTTAATCTTCATTTTAGCAT+TGG - chr4_1:77305572-77305591 None:intergenic 20.0%
!!! CCAATTTATGGATTTTAAAA+AGG - chr4_1:77305745-77305764 None:intergenic 20.0%
!!! CCTTTTTAAAATCCATAAAT+TGG + chr4_1:77305742-77305761 Msa0573970:intron 20.0%
!!! CACTAGTTAAAAAATTTGTT+CGG + chr4_1:77305790-77305809 Msa0573970:intron 20.0%
!!! ATCCATTTTAGACAAATTTA+AGG + chr4_1:77306049-77306068 Msa0573970:intron 20.0%
!! AACCTTAAATTTGTCTAAAA+TGG - chr4_1:77306054-77306073 None:intergenic 20.0%
!!! ATTTTCTACAAAATCGAATT+TGG - chr4_1:77306382-77306401 None:intergenic 20.0%
!! TACAATGCTTATAAAAAAAG+TGG + chr4_1:77306468-77306487 Msa0573970:three_prime_UTR 20.0%
! AAAAATGAGAGAAAGAGATT+CGG - chr4_1:77301768-77301787 None:intergenic 25.0%
! TGTAGATTATTCAGACAAAA+TGG + chr4_1:77301962-77301981 Msa0573970:CDS 25.0%
! ATAACAAAATGTGAATCTTC+AGG - chr4_1:77302322-77302341 None:intergenic 25.0%
! ACTTAATCGTTTACTCAAAT+AGG - chr4_1:77302400-77302419 None:intergenic 25.0%
! TAAACTTAATTGGATTGAGA+AGG + chr4_1:77302817-77302836 Msa0573970:intron 25.0%
! GAATTTAGACTTTATGAAGT+AGG + chr4_1:77302922-77302941 Msa0573970:intron 25.0%
!!! GGAGTTGATAAATATGATAT+TGG + chr4_1:77303012-77303031 Msa0573970:CDS 25.0%
! ATACTAGTGATACTAAAGTT+TGG - chr4_1:77303084-77303103 None:intergenic 25.0%
!!! ATTTAGGATTTTCTTTCCAT+TGG + chr4_1:77303205-77303224 Msa0573970:intron 25.0%
!! TGGTTACAAATTTGAACTTT+TGG + chr4_1:77303387-77303406 Msa0573970:CDS 25.0%
!!! AAATTTGAACTTTTGGAAAG+AGG + chr4_1:77303394-77303413 Msa0573970:CDS 25.0%
! GAAAAATACATAAAGTAGGT+GGG - chr4_1:77303648-77303667 None:intergenic 25.0%
! TGAAAAATACATAAAGTAGG+TGG - chr4_1:77303649-77303668 None:intergenic 25.0%
! CAGTGAAAAATACATAAAGT+AGG - chr4_1:77303652-77303671 None:intergenic 25.0%
!!! GTATACCTGTTTTGAAATAT+TGG + chr4_1:77303704-77303723 Msa0573970:intron 25.0%
!! AAATATCTTTTGCAAGTCTT+AGG + chr4_1:77303733-77303752 Msa0573970:intron 25.0%
! AAAAGCCATAATATGAAAGA+AGG - chr4_1:77303810-77303829 None:intergenic 25.0%
! AACTACGGAAATAAATATTC+GGG - chr4_1:77304099-77304118 None:intergenic 25.0%
! GAACTACGGAAATAAATATT+CGG - chr4_1:77304100-77304119 None:intergenic 25.0%
! TACAAAAACTTTCAACATAC+AGG - chr4_1:77304478-77304497 None:intergenic 25.0%
! ATAAAAGAATGAGGATAACA+AGG + chr4_1:77304499-77304518 Msa0573970:intron 25.0%
! ATATGGTATCAGAAACTTTA+TGG - chr4_1:77304546-77304565 None:intergenic 25.0%
! AAAGCATATAAGGACAAAAT+CGG - chr4_1:77304870-77304889 None:intergenic 25.0%
!! TTTTGTCCTTATATGCTTTT+CGG + chr4_1:77304871-77304890 Msa0573970:intron 25.0%
!!! GAGTCACTTTAAAGTAATTA+TGG - chr4_1:77304969-77304988 None:intergenic 25.0%
! AAGAAAACACATAGATGAAA+GGG - chr4_1:77305119-77305138 None:intergenic 25.0%
! AAAGAAAACACATAGATGAA+AGG - chr4_1:77305120-77305139 None:intergenic 25.0%
! TAGTTGTATTTGTATATGAC+AGG - chr4_1:77305379-77305398 None:intergenic 25.0%
! GGAAACATGAAAATAGATTA+AGG - chr4_1:77305418-77305437 None:intergenic 25.0%
!!! AATCTTATTTTGGTACCTTA+TGG + chr4_1:77305616-77305635 Msa0573970:intron 25.0%
! TGATTATTGTGAATACCATA+AGG - chr4_1:77305634-77305653 None:intergenic 25.0%
!!! TTTTAAAAAGGAAGCGATAA+TGG - chr4_1:77305733-77305752 None:intergenic 25.0%
! AACACTCAAAATCCAATTTA+TGG - chr4_1:77305757-77305776 None:intergenic 25.0%
!! TTGTCTAAAATGGATCAATA+TGG - chr4_1:77306044-77306063 None:intergenic 25.0%
! TAGTACTTCTATTTGTCAAT+TGG + chr4_1:77306127-77306146 Msa0573970:intron 25.0%
! AAAATGAACAAACAACAGAA+GGG - chr4_1:77306163-77306182 None:intergenic 25.0%
! AAAAATGAACAAACAACAGA+AGG - chr4_1:77306164-77306183 None:intergenic 25.0%
!!! TATTGATTTTCTAAAGGAGT+TGG + chr4_1:77306249-77306268 Msa0573970:three_prime_UTR 25.0%
AGAATTGAAAAACTAGCGAT+GGG - chr4_1:77301715-77301734 None:intergenic 30.0%
TAGAATTGAAAAACTAGCGA+TGG - chr4_1:77301716-77301735 None:intergenic 30.0%
AAAATGAGAGAAAGAGATTC+GGG - chr4_1:77301767-77301786 None:intergenic 30.0%
! ATCATGAATAAGTTGAGAGA+GGG - chr4_1:77301806-77301825 None:intergenic 30.0%
! AATCATGAATAAGTTGAGAG+AGG - chr4_1:77301807-77301826 None:intergenic 30.0%
TCATCATGAGAAGTAAAGAA+AGG - chr4_1:77301834-77301853 None:intergenic 30.0%
ATCAGAAAATGTACTGGAAT+GGG + chr4_1:77302042-77302061 Msa0573970:CDS 30.0%
! AGATATACCAATGCTTTTCT+TGG + chr4_1:77302289-77302308 Msa0573970:intron 30.0%
TATTGAACTCACATACAGTA+AGG + chr4_1:77302339-77302358 Msa0573970:intron 30.0%
TCAAATAAGTCAATCCAAAC+AGG + chr4_1:77302622-77302641 Msa0573970:intron 30.0%
TTTAGCATTTAGTACCTGTT+TGG - chr4_1:77302639-77302658 None:intergenic 30.0%
TCAAAGTTATATACCAAACC+TGG - chr4_1:77302662-77302681 None:intergenic 30.0%
TATGATATTGGAACTGCATT+TGG + chr4_1:77303024-77303043 Msa0573970:CDS 30.0%
AGTTCAAATTTGTAACCATC+AGG - chr4_1:77303385-77303404 None:intergenic 30.0%
! TTGAATTTTATGAGAAGGTG+AGG + chr4_1:77303476-77303495 Msa0573970:intron 30.0%
CAAAAGAACACAAAAGCAAA+AGG - chr4_1:77303682-77303701 None:intergenic 30.0%
GTGTACCAATATTTCAAAAC+AGG - chr4_1:77303712-77303731 None:intergenic 30.0%
AAAGAAGAACAAGAGAAAAG+AGG - chr4_1:77303962-77303981 None:intergenic 30.0%
ACTACGGAAATAAATATTCG+GGG - chr4_1:77304098-77304117 None:intergenic 30.0%
AAGAAACCATCTTCAAATAG+AGG - chr4_1:77304127-77304146 None:intergenic 30.0%
!! GTAATTTTTGTGTTGATACC+AGG - chr4_1:77304270-77304289 None:intergenic 30.0%
ATTCACTCAAACGTTTAACA+TGG + chr4_1:77304362-77304381 Msa0573970:intron 30.0%
TCAAACGTTTAACATGGAAA+GGG + chr4_1:77304368-77304387 Msa0573970:intron 30.0%
GGATCAAACTGTTAACTATT+TGG + chr4_1:77304520-77304539 Msa0573970:intron 30.0%
!! GATTAGGAGTGTCTTTAATA+TGG - chr4_1:77304563-77304582 None:intergenic 30.0%
!!! TTAGCTTTTGAGGTTGATTT+AGG + chr4_1:77304616-77304635 Msa0573970:intron 30.0%
GATCTTAGAATTTGGACTTT+AGG - chr4_1:77304642-77304661 None:intergenic 30.0%
TCAGATACGATCTTAGAATT+TGG - chr4_1:77304650-77304669 None:intergenic 30.0%
TACATATAGTCGTTTAGTGT+GGG + chr4_1:77304802-77304821 Msa0573970:intron 30.0%
AAATCGGTATTCCACAAAAT+GGG - chr4_1:77304854-77304873 None:intergenic 30.0%
AAAATCGGTATTCCACAAAA+TGG - chr4_1:77304855-77304874 None:intergenic 30.0%
TAATTATGGAGAGACAGTTT+AGG - chr4_1:77304955-77304974 None:intergenic 30.0%
GAAATGATAAAGAAAGAGAC+TGG - chr4_1:77305355-77305374 None:intergenic 30.0%
TAACAAGACCAATATGGATA+CGG - chr4_1:77305698-77305717 None:intergenic 30.0%
TGTATGTAACAAGACCAATA+TGG - chr4_1:77305704-77305723 None:intergenic 30.0%
!!! AATTTTTTAACTAGTGCGCT+TGG - chr4_1:77305786-77305805 None:intergenic 30.0%
TGGCGACTTGTAAAAAAATT+GGG - chr4_1:77305830-77305849 None:intergenic 30.0%
ATGGCGACTTGTAAAAAAAT+TGG - chr4_1:77305831-77305850 None:intergenic 30.0%
CGTACAAAACAAACGAATAA+TGG - chr4_1:77305850-77305869 None:intergenic 30.0%
! TTTTCCAATCTCAAATGTTC+AGG + chr4_1:77306213-77306232 Msa0573970:intron 30.0%
! AAAACCTGAACATTTGAGAT+TGG - chr4_1:77306220-77306239 None:intergenic 30.0%
CTATAGACATACCAATTCTT+TGG - chr4_1:77306339-77306358 None:intergenic 30.0%
GAGCACAAGAAAAGAAAGAA+AGG - chr4_1:77301604-77301623 None:intergenic 35.0%
TGGATGATGAACTATGTATG+AGG - chr4_1:77301626-77301645 None:intergenic 35.0%
CGATTAAAGAGAGAAAGAGT+GGG - chr4_1:77301739-77301758 None:intergenic 35.0%
AAATGAGAGAAAGAGATTCG+GGG - chr4_1:77301766-77301785 None:intergenic 35.0%
!! TCTTTCTCTCATTTTTCCAC+CGG + chr4_1:77301772-77301791 Msa0573970:CDS 35.0%
! GTTTCACAAACCCATAGTTT+TGG + chr4_1:77301929-77301948 Msa0573970:CDS 35.0%
AGCTTTCAAGCCAAAACTAT+GGG - chr4_1:77301942-77301961 None:intergenic 35.0%
AAGCTTTCAAGCCAAAACTA+TGG - chr4_1:77301943-77301962 None:intergenic 35.0%
TGCTTCATCAGAAAATGTAC+TGG + chr4_1:77302036-77302055 Msa0573970:CDS 35.0%
CATCAGAAAATGTACTGGAA+TGG + chr4_1:77302041-77302060 Msa0573970:CDS 35.0%
! CTTCATGTTGTTTATCGTGT+TGG + chr4_1:77302088-77302107 Msa0573970:CDS 35.0%
! AGATTTTATACCGAGTGTCT+GGG + chr4_1:77302229-77302248 Msa0573970:intron 35.0%
! GCATTGGTATATCTTTCTTC+CGG - chr4_1:77302283-77302302 None:intergenic 35.0%
! ACCAATGCTTTTCTTGGATA+TGG + chr4_1:77302295-77302314 Msa0573970:intron 35.0%
! TCCATATCCAAGAAAAGCAT+TGG - chr4_1:77302299-77302318 None:intergenic 35.0%
AACATAAGCACTTGTGAGAA+TGG - chr4_1:77302591-77302610 None:intergenic 35.0%
ACTAAATGCTAAACCAGGTT+TGG + chr4_1:77302646-77302665 Msa0573970:intron 35.0%
TCAAAACCCATAGGTCAATT+TGG - chr4_1:77302864-77302883 None:intergenic 35.0%
TCAACATAGTCAAAACCCAT+AGG - chr4_1:77302873-77302892 None:intergenic 35.0%
GTGGAACTAATAAGAGCTAA+AGG + chr4_1:77303292-77303311 Msa0573970:CDS 35.0%
GAACTAATAAGAGCTAAAGG+TGG + chr4_1:77303295-77303314 Msa0573970:CDS 35.0%
! TCTTTTGCCTTTTGACACTT+TGG + chr4_1:77303769-77303788 Msa0573970:intron 35.0%
ATATGAAAGAAGGTAGGCAA+AGG - chr4_1:77303800-77303819 None:intergenic 35.0%
GCCTACCTTCTTTCATATTA+TGG + chr4_1:77303802-77303821 Msa0573970:intron 35.0%
GCCATAATATGAAAGAAGGT+AGG - chr4_1:77303806-77303825 None:intergenic 35.0%
!! AGAACAGTCGTTTTATCTTC+TGG - chr4_1:77303868-77303887 None:intergenic 35.0%
AGAAGATAAAACGACTGTTC+TGG + chr4_1:77303867-77303886 Msa0573970:CDS 35.0%
! CTGGAGTTGACTTACAATTA+TGG + chr4_1:77303886-77303905 Msa0573970:CDS 35.0%
GGAGTCACTGAATATGATAA+AGG + chr4_1:77303907-77303926 Msa0573970:CDS 35.0%
TAAAGGAAATGCTTATGCTC+AGG + chr4_1:77303924-77303943 Msa0573970:CDS 35.0%
TTCGATTGAATCTTGTGAAG+AGG + chr4_1:77303982-77304001 Msa0573970:intron 35.0%
CTATTGCAATCTGTAAAGTG+GGG - chr4_1:77304170-77304189 None:intergenic 35.0%
CCTATTGCAATCTGTAAAGT+GGG - chr4_1:77304171-77304190 None:intergenic 35.0%
ACCTATTGCAATCTGTAAAG+TGG - chr4_1:77304172-77304191 None:intergenic 35.0%
CTCAAACGTTTAACATGGAA+AGG + chr4_1:77304367-77304386 Msa0573970:intron 35.0%
AAAAGCTAACTCAAAAGACG+AGG - chr4_1:77304605-77304624 None:intergenic 35.0%
!!! GTCTTTTGAGTTAGCTTTTG+AGG + chr4_1:77304606-77304625 Msa0573970:intron 35.0%
AACGACTATATGTACCTAGA+AGG - chr4_1:77304796-77304815 None:intergenic 35.0%
GTACATATAGTCGTTTAGTG+TGG + chr4_1:77304801-77304820 Msa0573970:intron 35.0%
GGTATGCTTCTAGACTTAAT+TGG - chr4_1:77304833-77304852 None:intergenic 35.0%
! GAGGAGTTGTCTGATTTTAA+TGG - chr4_1:77305057-77305076 None:intergenic 35.0%
TTAAAACAAGTCTCGCTCTT+GGG - chr4_1:77305088-77305107 None:intergenic 35.0%
ATTAAAACAAGTCTCGCTCT+TGG - chr4_1:77305089-77305108 None:intergenic 35.0%
GGGAATTGATATCAATGAAG+AGG - chr4_1:77305185-77305204 None:intergenic 35.0%
CATGAGTTGTTGAAGAGTTA+GGG - chr4_1:77305205-77305224 None:intergenic 35.0%
GGGGAATAATTTCCTTCATT+GGG - chr4_1:77305327-77305346 None:intergenic 35.0%
AGGGGAATAATTTCCTTCAT+TGG - chr4_1:77305328-77305347 None:intergenic 35.0%
TCCCTAACTGTTTAAGTAAC+TGG + chr4_1:77305473-77305492 Msa0573970:intron 35.0%
GCCAGTTACTTAAACAGTTA+GGG - chr4_1:77305477-77305496 None:intergenic 35.0%
TGCGATAGTGTCAGTATAAA+GGG - chr4_1:77305519-77305538 None:intergenic 35.0%
TTGCGATAGTGTCAGTATAA+AGG - chr4_1:77305520-77305539 None:intergenic 35.0%
ACACACCAAAGTAAACAGAA+GGG - chr4_1:77305894-77305913 None:intergenic 35.0%
GTGTGTGTTCTTATGTAAGA+TGG - chr4_1:77305922-77305941 None:intergenic 35.0%
!! GTTGGAGTAGAAGAGTATTT+AGG + chr4_1:77306267-77306286 Msa0573970:three_prime_UTR 35.0%
!! GAGTAGAAGAGTATTTAGGT+AGG + chr4_1:77306271-77306290 Msa0573970:three_prime_UTR 35.0%
GCGATTAAAGAGAGAAAGAG+TGG - chr4_1:77301740-77301759 None:intergenic 40.0%
TTGAGAGAGGGAGAAATTAC+CGG - chr4_1:77301794-77301813 None:intergenic 40.0%
! TCTCTGAAAGTGATGTCATC+TGG + chr4_1:77301989-77302008 Msa0573970:CDS 40.0%
! CTCTGAAAGTGATGTCATCT+GGG + chr4_1:77301990-77302009 Msa0573970:CDS 40.0%
!! TGTTTATCGTGTTGGTGACT+TGG + chr4_1:77302096-77302115 Msa0573970:CDS 40.0%
! CAGATTTTATACCGAGTGTC+TGG + chr4_1:77302228-77302247 Msa0573970:intron 40.0%
CAGGTACTAAATGCTAAACC+AGG + chr4_1:77302641-77302660 Msa0573970:intron 40.0%
AGCCAATCCAAATTGACCTA+TGG + chr4_1:77302854-77302873 Msa0573970:intron 40.0%
GCCAATCCAAATTGACCTAT+GGG + chr4_1:77302855-77302874 Msa0573970:intron 40.0%
ACCCATAGGTCAATTTGGAT+TGG - chr4_1:77302859-77302878 None:intergenic 40.0%
CATCAACAGCAATACCGAAA+TGG - chr4_1:77303050-77303069 None:intergenic 40.0%
TGTGTTCATTCCTGTTGAGT+TGG + chr4_1:77303132-77303151 Msa0573970:intron 40.0%
CATGTTTGTCAAAAGGCCAA+TGG - chr4_1:77303224-77303243 None:intergenic 40.0%
!!! CATTGGCCTTTTGACAAACA+TGG + chr4_1:77303222-77303241 Msa0573970:intron 40.0%
CAGCATCCATGTTTGTCAAA+AGG - chr4_1:77303231-77303250 None:intergenic 40.0%
! CTTTTGACAAACATGGATGC+TGG + chr4_1:77303229-77303248 Msa0573970:intron 40.0%
GGAAAAATAACTAGAGAGCC+TGG + chr4_1:77303316-77303335 Msa0573970:CDS 40.0%
! GCATTTGTTGAAGATCCTGA+TGG + chr4_1:77303367-77303386 Msa0573970:CDS 40.0%
ATACCAAAAGCCTAAATGGC+AGG - chr4_1:77303579-77303598 None:intergenic 40.0%
!! TGCCATTTAGGCTTTTGGTA+TGG + chr4_1:77303578-77303597 Msa0573970:intron 40.0%
CTCCATACCAAAAGCCTAAA+TGG - chr4_1:77303583-77303602 None:intergenic 40.0%
! GGAAATAGTACCTTGTTGTC+TGG - chr4_1:77303627-77303646 None:intergenic 40.0%
CAGTATACCATAGCAATGCT+TGG + chr4_1:77303835-77303854 Msa0573970:intron 40.0%
ACCATAGCAATGCTTGGTTA+TGG + chr4_1:77303841-77303860 Msa0573970:CDS 40.0%
! ACCATAACCAAGCATTGCTA+TGG - chr4_1:77303845-77303864 None:intergenic 40.0%
! TGAAGAGGTTTTCATTGCTG+TGG + chr4_1:77303997-77304016 Msa0573970:intron 40.0%
CAAATAGAGGCAAGGAACTA+CGG - chr4_1:77304114-77304133 None:intergenic 40.0%
TCCTTGCCTCTATTTGAAGA+TGG + chr4_1:77304118-77304137 Msa0573970:intron 40.0%
ACCATCTTCAAATAGAGGCA+AGG - chr4_1:77304122-77304141 None:intergenic 40.0%
CCCACTTTACAGATTGCAAT+AGG + chr4_1:77304168-77304187 Msa0573970:intron 40.0%
CGTGGATAGTTTAATCGCTT+CGG - chr4_1:77304217-77304236 None:intergenic 40.0%
CGAAGCGATTAAACTATCCA+CGG + chr4_1:77304215-77304234 Msa0573970:CDS 40.0%
GAAGCGATTAAACTATCCAC+GGG + chr4_1:77304216-77304235 Msa0573970:CDS 40.0%
! TTTGTGTTGATACCAGGCAA+TGG - chr4_1:77304264-77304283 None:intergenic 40.0%
CACAAAAATTACTGCATGCC+TGG + chr4_1:77304278-77304297 Msa0573970:intron 40.0%
ACGTTTAACATGGAAAGGGA+AGG + chr4_1:77304372-77304391 Msa0573970:intron 40.0%
AGACACTCCTAATCCTTGTT+AGG + chr4_1:77304569-77304588 Msa0573970:intron 40.0%
TCCATTCTAGATCTGCTCTT+AGG + chr4_1:77304671-77304690 Msa0573970:intron 40.0%
CTTGGAGCATGGACAAATAA+GGG - chr4_1:77304700-77304719 None:intergenic 40.0%
ACTTGGAGCATGGACAAATA+AGG - chr4_1:77304701-77304720 None:intergenic 40.0%
!! CTAGAAGCATACCCATTTTG+TGG + chr4_1:77304840-77304859 Msa0573970:intron 40.0%
! GAGTAGCCGAAAAGCATATA+AGG - chr4_1:77304880-77304899 None:intergenic 40.0%
TAGAATGAAGTGGAGCTTAC+AGG - chr4_1:77304925-77304944 None:intergenic 40.0%
AGGAGAGAACTAGAATGAAG+TGG - chr4_1:77304935-77304954 None:intergenic 40.0%
ATGGAAGACACATGTTGAGT+TGG - chr4_1:77305038-77305057 None:intergenic 40.0%
! GGAGACAGAAGCACATAATT+GGG - chr4_1:77305164-77305183 None:intergenic 40.0%
! AGGAGACAGAAGCACATAAT+TGG - chr4_1:77305165-77305184 None:intergenic 40.0%
GCATGAGTTGTTGAAGAGTT+AGG - chr4_1:77305206-77305225 None:intergenic 40.0%
CAAGTTTGACCTCAGAATAG+CGG + chr4_1:77305299-77305318 Msa0573970:intron 40.0%
AAAGAAAGAGACTGGTGACA+GGG - chr4_1:77305347-77305366 None:intergenic 40.0%
TAAAGAAAGAGACTGGTGAC+AGG - chr4_1:77305348-77305367 None:intergenic 40.0%
GGCCAGTTACTTAAACAGTT+AGG - chr4_1:77305478-77305497 None:intergenic 40.0%
CCAATATGGATACGGTGATA+TGG - chr4_1:77305690-77305709 None:intergenic 40.0%
CCATATCACCGTATCCATAT+TGG + chr4_1:77305687-77305706 Msa0573970:intron 40.0%
CACACACCAAAGTAAACAGA+AGG - chr4_1:77305895-77305914 None:intergenic 40.0%
TCAAACGTCTGCCAAAGAAT+TGG + chr4_1:77306325-77306344 Msa0573970:three_prime_UTR 40.0%
AACAAATGCTAGAACAGCGT+AGG + chr4_1:77306431-77306450 Msa0573970:three_prime_UTR 40.0%
ACAAATGCTAGAACAGCGTA+GGG + chr4_1:77306432-77306451 Msa0573970:three_prime_UTR 40.0%
!! AGTGAGTGAAGGAAGTGTTG+TGG - chr4_1:77301646-77301665 None:intergenic 45.0%
TGTGAAGTGTGAGTGAGTGA+AGG - chr4_1:77301657-77301676 None:intergenic 45.0%
!! TCATCACCGACTCAAAGCTA+TGG + chr4_1:77301678-77301697 Msa0573970:exon 45.0%
!! CTCTCACCATAGCTTTGAGT+CGG - chr4_1:77301687-77301706 None:intergenic 45.0%
GGAACTGCATTTGGCCATTT+CGG + chr4_1:77303033-77303052 Msa0573970:CDS 45.0%
AGGAATGAACACAGCATGAG+AGG - chr4_1:77303125-77303144 None:intergenic 45.0%
!! GTTCATTCCTGTTGAGTTGG+TGG + chr4_1:77303135-77303154 Msa0573970:intron 45.0%
CCATGTGAGATTGAGGATCA+AGG - chr4_1:77303161-77303180 None:intergenic 45.0%
CCTTGATCCTCAATCTCACA+TGG + chr4_1:77303158-77303177 Msa0573970:intron 45.0%
ATCCTCAATCTCACATGGTG+TGG + chr4_1:77303163-77303182 Msa0573970:intron 45.0%
! ACTGTTTTGCCTCCTTTGAC+AGG - chr4_1:77303343-77303362 None:intergenic 45.0%
AGCATGAGCTGACACAGAAT+AGG - chr4_1:77303508-77303527 None:intergenic 45.0%
!! TTGCCTGCCATTTAGGCTTT+TGG + chr4_1:77303573-77303592 Msa0573970:intron 45.0%
! GGACATGCCAAAGTGTCAAA+AGG - chr4_1:77303779-77303798 None:intergenic 45.0%
TATCCACGGGAAAGCTTACT+CGG + chr4_1:77304229-77304248 Msa0573970:CDS 45.0%
CTTGCATGTGGTGATCTGTT+AGG - chr4_1:77304416-77304435 None:intergenic 45.0%
AACAGATCACCACATGCAAG+AGG + chr4_1:77304416-77304435 Msa0573970:intron 45.0%
GCTCAAGCCTAACAAGGATT+AGG - chr4_1:77304579-77304598 None:intergenic 45.0%
GCCTAAGAGCAGATCTAGAA+TGG - chr4_1:77304675-77304694 None:intergenic 45.0%
ATTTGTCCATGCTCCAAGTG+TGG + chr4_1:77304702-77304721 Msa0573970:intron 45.0%
TTTGTCCATGCTCCAAGTGT+GGG + chr4_1:77304703-77304722 Msa0573970:intron 45.0%
TGCCAAGCTGCTTGCTTAAA+GGG - chr4_1:77304733-77304752 None:intergenic 45.0%
ATGCCAAGCTGCTTGCTTAA+AGG - chr4_1:77304734-77304753 None:intergenic 45.0%
!! TAACCTGACGAGTCTTGTTG+AGG + chr4_1:77304757-77304776 Msa0573970:intron 45.0%
GAACTCTATACGAGCCTTCT+AGG + chr4_1:77304779-77304798 Msa0573970:intron 45.0%
ATAGTCGTTTAGTGTGGGCT+TGG + chr4_1:77304807-77304826 Msa0573970:intron 45.0%
! ATGCTTTTCGGCTACTCCAT+TGG + chr4_1:77304883-77304902 Msa0573970:intron 45.0%
TTAAAGTGACTCCTCCTCTC+AGG + chr4_1:77304977-77304996 Msa0573970:intron 45.0%
AAAAGCAAGGACAACCTGAG+AGG - chr4_1:77304994-77305013 None:intergenic 45.0%
! GAGATCATGAAGCAGGTTGA+TGG - chr4_1:77305254-77305273 None:intergenic 45.0%
TCAACCTGCTTCATGATCTC+AGG + chr4_1:77305254-77305273 Msa0573970:intron 45.0%
CAACCTGCTTCATGATCTCA+GGG + chr4_1:77305255-77305274 Msa0573970:intron 45.0%
TTACCCTGAGATCATGAAGC+AGG - chr4_1:77305261-77305280 None:intergenic 45.0%
! AGAATAGCGGAACCCAATGA+AGG + chr4_1:77305312-77305331 Msa0573970:intron 45.0%
AAGAAAGAGACTGGTGACAG+GGG - chr4_1:77305346-77305365 None:intergenic 45.0%
CACCAAAGTAAACAGAAGGG+AGG - chr4_1:77305891-77305910 None:intergenic 45.0%
AGAGAGGGAGAAATTACCGG+TGG - chr4_1:77301791-77301810 None:intergenic 50.0%
CAGCTTCATTCCCAGACACT+CGG - chr4_1:77302242-77302261 None:intergenic 50.0%
! GCTTAGAAAGCGCGACATAC+CGG + chr4_1:77302261-77302280 Msa0573970:intron 50.0%
ATCAAGGCCACCAACTCAAC+AGG - chr4_1:77303145-77303164 None:intergenic 50.0%
CTCCACACCATGTGAGATTG+AGG - chr4_1:77303168-77303187 None:intergenic 50.0%
CTCAATCTCACATGGTGTGG+AGG + chr4_1:77303166-77303185 Msa0573970:intron 50.0%
ATCACTTGGCACAATGGCTC+GGG - chr4_1:77303427-77303446 None:intergenic 50.0%
CATCACTTGGCACAATGGCT+CGG - chr4_1:77303428-77303447 None:intergenic 50.0%
! CGAAGCATCACTTGGCACAA+TGG - chr4_1:77303433-77303452 None:intergenic 50.0%
TGCCAAGTGATGCTTCGAGT+GGG + chr4_1:77303436-77303455 Msa0573970:CDS 50.0%
! TACGTGGTTGCCTGCCATTT+AGG + chr4_1:77303566-77303585 Msa0573970:intron 50.0%
GCGGGATAATCCAGACAACA+AGG + chr4_1:77303614-77303633 Msa0573970:CDS 50.0%
ATCCACGGGAAAGCTTACTC+GGG + chr4_1:77304230-77304249 Msa0573970:CDS 50.0%
TTGATACCAGGCAATGGTCC+AGG - chr4_1:77304258-77304277 None:intergenic 50.0%
TCTTCCATCCATCAGGATCC+AGG - chr4_1:77304299-77304318 None:intergenic 50.0%
! GGATCCTGATGGATGGAAGA+CGG + chr4_1:77304299-77304318 Msa0573970:intron 50.0%
CATACCGTCTTCCATCCATC+AGG - chr4_1:77304306-77304325 None:intergenic 50.0%
GGAAAGGGAAGGCTTGTGAA+TGG + chr4_1:77304383-77304402 Msa0573970:intron 50.0%
CCTCAACAACCTCTTGCATG+TGG - chr4_1:77304428-77304447 None:intergenic 50.0%
CCACATGCAAGAGGTTGTTG+AGG + chr4_1:77304425-77304444 Msa0573970:intron 50.0%
AGGACTGCTCAAGCCTAACA+AGG - chr4_1:77304585-77304604 None:intergenic 50.0%
TTAAAGGGCAAGCCCACACT+TGG - chr4_1:77304718-77304737 None:intergenic 50.0%
TGCCCTTTAAGCAAGCAGCT+TGG + chr4_1:77304728-77304747 Msa0573970:intron 50.0%
GTTCCTCAACAAGACTCGTC+AGG - chr4_1:77304763-77304782 None:intergenic 50.0%
TAGAAGCAACGTGGAGCCAA+TGG - chr4_1:77304902-77304921 None:intergenic 50.0%
GCTTACAGGTAGAAGCAACG+TGG - chr4_1:77304911-77304930 None:intergenic 50.0%
CTCAGGGTAACTGTAGTTCC+AGG + chr4_1:77305271-77305290 Msa0573970:intron 50.0%
GAGGTCAAACTTGTGACTCC+TGG - chr4_1:77305292-77305311 None:intergenic 50.0%
CATTGGGTTCCGCTATTCTG+AGG - chr4_1:77305311-77305330 None:intergenic 50.0%
CGCCTCCCTTCTGTTTACTT+TGG + chr4_1:77305886-77305905 Msa0573970:intron 50.0%
AGAGAGCCTGGTCCTGTCAA+AGG + chr4_1:77303328-77303347 Msa0573970:CDS 55.0%
TTGCCTCCTTTGACAGGACC+AGG - chr4_1:77303337-77303356 None:intergenic 55.0%
GTGCCAAGTGATGCTTCGAG+TGG + chr4_1:77303435-77303454 Msa0573970:CDS 55.0%
! CACCCACTCGAAGCATCACT+TGG - chr4_1:77303441-77303460 None:intergenic 55.0%
GTATGGAGCTGCTTCGTACG+CGG + chr4_1:77303595-77303614 Msa0573970:CDS 55.0%
TATGGAGCTGCTTCGTACGC+GGG + chr4_1:77303596-77303615 Msa0573970:CDS 55.0%
TTCCCGAGTAAGCTTTCCCG+TGG - chr4_1:77304235-77304254 None:intergenic 55.0%
GGAAAGCTTACTCGGGAACC+TGG + chr4_1:77304237-77304256 Msa0573970:CDS 55.0%
ACTGCATGCCTGGATCCTGA+TGG + chr4_1:77304288-77304307 Msa0573970:intron 55.0%
CATGCCTGGATCCTGATGGA+TGG + chr4_1:77304292-77304311 Msa0573970:intron 55.0%
AGCAAGGACAACCTGAGAGG+AGG - chr4_1:77304991-77305010 None:intergenic 55.0%
GGGAAGAGCGACAGATAGAG+AGG - chr4_1:77305499-77305518 None:intergenic 55.0%
GAGCCTGGTCCTGTCAAAGG+AGG + chr4_1:77303331-77303350 Msa0573970:CDS 60.0%
! TGGCACAATGGCTCGGGAGT+GGG - chr4_1:77303421-77303440 None:intergenic 60.0%
! TTGGCACAATGGCTCGGGAG+TGG - chr4_1:77303422-77303441 None:intergenic 60.0%
GCAAGCCCACACTTGGAGCA+TGG - chr4_1:77304711-77304730 None:intergenic 60.0%
TCGCTCTTGGGTGACGATGG+AGG - chr4_1:77305076-77305095 None:intergenic 60.0%
GTCTCGCTCTTGGGTGACGA+TGG - chr4_1:77305079-77305098 None:intergenic 60.0%
CGGGAACCTGGACCATTGCC+TGG + chr4_1:77304249-77304268 Msa0573970:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 77301597 77306546 77301597 ID=Msa0573970;Name=Msa0573970
chr4_1 mRNA 77301597 77306546 77301597 ID=Msa0573970-mRNA-1;Parent=Msa0573970;Name=Msa0573970-mRNA-1;_AED=0.13;_eAED=0.13;_QI=100|0.75|0.77|1|0.75|0.77|9|298|285
chr4_1 exon 77301597 77301793 77301597 ID=Msa0573970-mRNA-1:exon:27204;Parent=Msa0573970-mRNA-1
chr4_1 exon 77301924 77302131 77301924 ID=Msa0573970-mRNA-1:exon:27205;Parent=Msa0573970-mRNA-1
chr4_1 exon 77302231 77302244 77302231 ID=Msa0573970-mRNA-1:exon:27206;Parent=Msa0573970-mRNA-1
chr4_1 exon 77303007 77303071 77303007 ID=Msa0573970-mRNA-1:exon:27207;Parent=Msa0573970-mRNA-1
chr4_1 exon 77303280 77303492 77303280 ID=Msa0573970-mRNA-1:exon:27208;Parent=Msa0573970-mRNA-1
chr4_1 exon 77303588 77303635 77303588 ID=Msa0573970-mRNA-1:exon:27209;Parent=Msa0573970-mRNA-1
chr4_1 exon 77303838 77303945 77303838 ID=Msa0573970-mRNA-1:exon:27210;Parent=Msa0573970-mRNA-1
chr4_1 exon 77304180 77304270 77304180 ID=Msa0573970-mRNA-1:exon:27211;Parent=Msa0573970-mRNA-1
chr4_1 exon 77306235 77306546 77306235 ID=Msa0573970-mRNA-1:exon:27212;Parent=Msa0573970-mRNA-1
chr4_1 five_prime_UTR 77301597 77301696 77301597 ID=Msa0573970-mRNA-1:five_prime_utr;Parent=Msa0573970-mRNA-1
chr4_1 CDS 77301697 77301793 77301697 ID=Msa0573970-mRNA-1:cds;Parent=Msa0573970-mRNA-1
chr4_1 CDS 77301924 77302131 77301924 ID=Msa0573970-mRNA-1:cds;Parent=Msa0573970-mRNA-1
chr4_1 CDS 77302231 77302244 77302231 ID=Msa0573970-mRNA-1:cds;Parent=Msa0573970-mRNA-1
chr4_1 CDS 77303007 77303071 77303007 ID=Msa0573970-mRNA-1:cds;Parent=Msa0573970-mRNA-1
chr4_1 CDS 77303280 77303492 77303280 ID=Msa0573970-mRNA-1:cds;Parent=Msa0573970-mRNA-1
chr4_1 CDS 77303588 77303635 77303588 ID=Msa0573970-mRNA-1:cds;Parent=Msa0573970-mRNA-1
chr4_1 CDS 77303838 77303945 77303838 ID=Msa0573970-mRNA-1:cds;Parent=Msa0573970-mRNA-1
chr4_1 CDS 77304180 77304270 77304180 ID=Msa0573970-mRNA-1:cds;Parent=Msa0573970-mRNA-1
chr4_1 CDS 77306235 77306248 77306235 ID=Msa0573970-mRNA-1:cds;Parent=Msa0573970-mRNA-1
chr4_1 three_prime_UTR 77306249 77306546 77306249 ID=Msa0573970-mRNA-1:three_prime_utr;Parent=Msa0573970-mRNA-1
Gene Sequence

>Msa0573970

ATGGTGAGAGTAATTCCCATCGCTAGTTTTTCAATTCTACCCACTCTTTCTCTCTTTAATCGCTCTCCCCGAATCTCTTTCTCTCATTTTTCCACCGCTGCAGTTTCACAAACCCATAGTTTTGGCTTGAAAGCTTGTAGATTATTCAGACAAAATGGAAACTCTCTGAAAGTGATGTCATCTGGGAACGTGTCATCATCAGTCACTGCTGCTTCATCAGAAAATGTACTGGAATGGGTCAAACAAGATAAAAGAAGAATGCTTCATGTTGTTTATCGTGTTGGTGACTTGGATAGAACTATTAAATTTTATACCGAGTATTACGGAGTTGATAAATATGATATTGGAACTGCATTTGGCCATTTCGGTATTGCTGTTGATGATATTACAAAAACAGTGGAACTAATAAGAGCTAAAGGTGGAAAAATAACTAGAGAGCCTGGTCCTGTCAAAGGAGGCAAAACAGTAATCGCATTTGTTGAAGATCCTGATGGTTACAAATTTGAACTTTTGGAAAGAGGTCCCACTCCCGAGCCATTGTGCCAAGTGATGCTTCGAGTGGGTGATCTTAACCGTTCAATTGAATTTTATGAGAAGGCTTTTGGTATGGAGCTGCTTCGTACGCGGGATAATCCAGACAACAAGTATACCATAGCAATGCTTGGTTATGGTCCAGAAGATAAAACGACTGTTCTGGAGTTGACTTACAATTATGGAGTCACTGAATATGATAAAGGAAATGCTTATGCTCAGATTGCAATAGGTACAGATGATGTGTACAAAACTGCCGAAGCGATTAAACTATCCACGGGAAAGCTTACTCGGGAACCTGGACCATTGCCTGGTTTTTGTAGATAA

Protein sequence

>Msa0573970

MVRVIPIASFSILPTLSLFNRSPRISFSHFSTAAVSQTHSFGLKACRLFRQNGNSLKVMSSGNVSSSVTAASSENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTEYYGVDKYDIGTAFGHFGIAVDDITKTVELIRAKGGKITREPGPVKGGKTVIAFVEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPDNKYTIAMLGYGPEDKTTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLSTGKLTREPGPLPGFCR*