Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0956450 | XP_013443336.1 | 98.837 | 172 | 2 | 0 | 1 | 172 | 1 | 172 | 1.66e-121 | 350 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0956450 | sp|Q9XH44|CET1_TOBAC | 74.419 | 172 | 43 | 1 | 2 | 172 | 3 | 174 | 1.46e-93 | 272 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0956450 | 0.810208 | 1.292220e-50 | -8.615850e-47 |
| Msa0108350 | Msa0956450 | 0.805033 | 1.622469e-49 | -8.615850e-47 |
| Msa0616300 | Msa0956450 | 0.810807 | 9.595019e-51 | -8.615850e-47 |
| Msa0631700 | Msa0956450 | 0.800321 | 1.522592e-48 | -8.615850e-47 |
| Msa0786940 | Msa0956450 | 0.801020 | 1.096649e-48 | -8.615850e-47 |
| Msa0814160 | Msa0956450 | 0.814768 | 1.301891e-51 | -8.615850e-47 |
| Msa0822410 | Msa0956450 | 0.812256 | 4.645168e-51 | -8.615850e-47 |
| Msa0150920 | Msa0956450 | 0.805690 | 1.182153e-49 | -8.615850e-47 |
| Msa0366510 | Msa0956450 | 0.807689 | 4.471584e-50 | -8.615850e-47 |
| Msa0374040 | Msa0956450 | 0.806266 | 8.940517e-50 | -8.615850e-47 |
| Msa0408860 | Msa0956450 | 0.822898 | 1.851681e-53 | -8.615850e-47 |
| Msa0273610 | Msa0956450 | 0.802961 | 4.375734e-49 | -8.615850e-47 |
| Msa0307040 | Msa0956450 | 0.815921 | 7.215814e-52 | -8.615850e-47 |
| Msa0313830 | Msa0956450 | 0.803599 | 3.227714e-49 | -8.615850e-47 |
| Msa0326770 | Msa0956450 | 0.806686 | 7.290707e-50 | -8.615850e-47 |
| Msa0535570 | Msa0956450 | 0.807051 | 6.106090e-50 | -8.615850e-47 |
| Msa0861730 | Msa0956450 | 0.823468 | 1.363128e-53 | -8.615850e-47 |
| Msa0910890 | Msa0956450 | 0.874611 | 5.897453e-68 | -8.615850e-47 |
| Msa0913550 | Msa0956450 | 0.812986 | 3.217262e-51 | -8.615850e-47 |
| Msa0921180 | Msa0956450 | 0.823330 | 1.468290e-53 | -8.615850e-47 |
| Msa0946010 | Msa0956450 | 0.817327 | 3.492379e-52 | -8.615850e-47 |
| Msa0956450 | Msa0959700 | 0.805838 | 1.099991e-49 | -8.615850e-47 |
| Msa0956450 | Msa0987640 | 0.812439 | 4.236322e-51 | -8.615850e-47 |
| Msa0956450 | Msa0991710 | 0.840913 | 6.530818e-58 | -8.615850e-47 |
| Msa0956450 | Msa0995110 | 0.815711 | 8.038896e-52 | -8.615850e-47 |
| Msa0956450 | Msa1022510 | 0.807703 | 4.439565e-50 | -8.615850e-47 |
| Msa0956450 | Msa1048400 | 0.816636 | 4.993715e-52 | -8.615850e-47 |
| Msa0956450 | Msa1181090 | 0.828336 | 9.511746e-55 | -8.615850e-47 |
| Msa0956450 | Msa1343590 | 0.818191 | 2.229100e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0956450 | MtrunA17_Chr6g0472451 | 98.837 | 172 | 2 | 0 | 1 | 172 | 1 | 172 | 1.53e-125 | 350 |
| Msa0956450 | MtrunA17_Chr7g0266201 | 70.833 | 168 | 48 | 1 | 6 | 172 | 7 | 174 | 7.86e-88 | 254 |
| Msa0956450 | MtrunA17_Chr2g0321301 | 66.474 | 173 | 57 | 1 | 1 | 172 | 1 | 173 | 1.13e-86 | 251 |
| Msa0956450 | MtrunA17_Chr1g0178751 | 62.264 | 159 | 58 | 1 | 6 | 162 | 7 | 165 | 4.76e-75 | 222 |
| Msa0956450 | MtrunA17_Chr7g0252784 | 59.036 | 166 | 68 | 0 | 7 | 172 | 8 | 173 | 1.07e-73 | 219 |
| Msa0956450 | MtrunA17_Chr6g0461711 | 58.084 | 167 | 70 | 0 | 6 | 172 | 7 | 173 | 2.51e-69 | 207 |
| Msa0956450 | MtrunA17_Chr7g0214771 | 57.485 | 167 | 70 | 1 | 7 | 172 | 8 | 174 | 3.12e-67 | 202 |
| Msa0956450 | MtrunA17_Chr7g0252800 | 57.895 | 171 | 71 | 1 | 2 | 172 | 5 | 174 | 3.56e-67 | 202 |
| Msa0956450 | MtrunA17_Chr7g0214761 | 55.556 | 171 | 75 | 1 | 3 | 172 | 4 | 174 | 1.51e-66 | 201 |
| Msa0956450 | MtrunA17_Chr8g0392741 | 53.757 | 173 | 78 | 2 | 1 | 172 | 2 | 173 | 1.82e-63 | 192 |
| Msa0956450 | MtrunA17_Chr7g0252811 | 53.750 | 160 | 73 | 1 | 13 | 172 | 36 | 194 | 4.45e-59 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0956450 | AT5G62040.1 | 68.391 | 174 | 53 | 2 | 1 | 172 | 1 | 174 | 1.96e-84 | 246 |
| Msa0956450 | AT2G27550.1 | 69.822 | 169 | 49 | 2 | 6 | 172 | 7 | 175 | 7.58e-83 | 242 |
| Msa0956450 | AT5G03840.1 | 62.791 | 172 | 63 | 1 | 2 | 172 | 6 | 177 | 2.95e-81 | 238 |
| Msa0956450 | AT1G65480.1 | 62.275 | 167 | 63 | 0 | 6 | 172 | 7 | 173 | 8.11e-76 | 224 |
| Msa0956450 | AT1G65480.2 | 62.275 | 167 | 63 | 0 | 6 | 172 | 51 | 217 | 1.37e-75 | 225 |
| Msa0956450 | AT4G20370.1 | 58.683 | 167 | 69 | 0 | 6 | 172 | 7 | 173 | 9.27e-69 | 206 |
| Msa0956450 | AT1G18100.1 | 52.299 | 174 | 80 | 2 | 1 | 172 | 1 | 173 | 2.86e-61 | 187 |
Find 44 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCTAGTGATCCACATTTA+AGG | 0.192828 | 6_3:+63755593 | Msa0956450:CDS |
| TGGATTCCAATCACTGGCTT+TGG | 0.338572 | 6_3:-63756413 | None:intergenic |
| GGTACCACAGATGTCTCTTT+TGG | 0.356770 | 6_3:+63755747 | Msa0956450:CDS |
| GGTTTGTTCATAACAATAGA+AGG | 0.359149 | 6_3:-63754765 | None:intergenic |
| TCACTAGGACTAGGAGCATC+TGG | 0.365823 | 6_3:-63755580 | None:intergenic |
| CATGAGATCTGCTTATACTT+TGG | 0.379247 | 6_3:+63754812 | Msa0956450:CDS |
| AACAAACCAAGGGTTGATAT+TGG | 0.388670 | 6_3:+63754780 | Msa0956450:CDS |
| ATAAGATGAAGACATATCTA+TGG | 0.405122 | 6_3:-63756433 | None:intergenic |
| TCCTAGTGATCCACATTTAA+GGG | 0.415346 | 6_3:+63755594 | Msa0956450:CDS |
| GAGAATCCAAAGCCAGTGAT+TGG | 0.439509 | 6_3:+63756407 | Msa0956450:CDS |
| TTGAAGTAAACTGCAGCAAC+AGG | 0.458327 | 6_3:-63756548 | None:intergenic |
| ATGACCATTTGCAACTTGCT+TGG | 0.464272 | 6_3:-63754733 | None:intergenic |
| CTTTCTGTAGGAAGAGTGAT+AGG | 0.465009 | 6_3:+63754657 | Msa0956450:CDS |
| GTCACATTCATTCTTACACT+TGG | 0.469107 | 6_3:-63754702 | None:intergenic |
| AGTTATCATGTCTAGGCCAT+TGG | 0.492357 | 6_3:+63754629 | None:intergenic |
| ACCATTTGCAACTTGCTTGG+TGG | 0.494743 | 6_3:-63754730 | None:intergenic |
| GAGAAACTGCAGCAAGAAGA+AGG | 0.495118 | 6_3:+63756579 | Msa0956450:CDS |
| ATCACTCTTCCTACAGAAAG+TGG | 0.502508 | 6_3:-63754654 | None:intergenic |
| TTGAAATTGTCTCTAGAAGA+TGG | 0.510509 | 6_3:-63756488 | None:intergenic |
| TTCTCACAGGAGAATAACCT+TGG | 0.519597 | 6_3:+63756521 | Msa0956450:CDS |
| TCCACCAAGCAAGTTGCAAA+TGG | 0.526204 | 6_3:+63754729 | Msa0956450:CDS |
| TGAAATTGTCTCTAGAAGAT+GGG | 0.541509 | 6_3:-63756487 | None:intergenic |
| AAATGTGGATCACTAGGACT+AGG | 0.546629 | 6_3:-63755589 | None:intergenic |
| TCATCTTATTCAAGCAGAGA+AGG | 0.551452 | 6_3:+63756447 | Msa0956450:CDS |
| CACTAGGACTAGGAGCATCT+GGG | 0.555253 | 6_3:-63755579 | None:intergenic |
| AGGATGGTTACAGATATTCC+AGG | 0.555677 | 6_3:+63755726 | Msa0956450:intron |
| TCACCACCAATATCAACCCT+TGG | 0.557340 | 6_3:-63754786 | None:intergenic |
| AAAGAGACATCTGTGGTACC+TGG | 0.563172 | 6_3:-63755744 | None:intergenic |
| CAACACAAGGAGATTCTCAC+AGG | 0.564893 | 6_3:+63756508 | Msa0956450:CDS |
| TATCTATGGATTCCAATCAC+TGG | 0.569156 | 6_3:-63756419 | None:intergenic |
| AAACCAAGGGTTGATATTGG+TGG | 0.571568 | 6_3:+63754783 | Msa0956450:CDS |
| ATTTAAGGGAACATCTCCAC+TGG | 0.572031 | 6_3:+63755608 | Msa0956450:CDS |
| CTATTGTTATGAACAAACCA+AGG | 0.572203 | 6_3:+63754769 | Msa0956450:CDS |
| CATTGTGAGTTATCATGTCT+AGG | 0.573768 | 6_3:+63754622 | None:intergenic |
| TATTGTTATGAACAAACCAA+GGG | 0.577645 | 6_3:+63754770 | Msa0956450:CDS |
| CCATTGGAACCACTTTCTGT+AGG | 0.584120 | 6_3:+63754645 | Msa0956450:CDS |
| CTAGAGACAATTTCAACACA+AGG | 0.589107 | 6_3:+63756495 | Msa0956450:CDS |
| TCCCTTAAATGTGGATCACT+AGG | 0.597152 | 6_3:-63755595 | None:intergenic |
| CCTACAGAAAGTGGTTCCAA+TGG | 0.603095 | 6_3:-63754645 | None:intergenic |
| TGGAGATGTTCCCTTAAATG+TGG | 0.614063 | 6_3:-63755604 | None:intergenic |
| GAAATTGTCTCTAGAAGATG+GGG | 0.619592 | 6_3:-63756486 | None:intergenic |
| TGATGCAGGAAATGAGATTG+TGG | 0.645531 | 6_3:+63756379 | Msa0956450:intron |
| CTGCAGCAACAGGTAAACCA+AGG | 0.708296 | 6_3:-63756538 | None:intergenic |
| CTAACCAAAAGAGACATCTG+TGG | 0.754543 | 6_3:-63755751 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | chr6_3:63755291-63755310 | Msa0956450:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr6_3:63755292-63755311 | Msa0956450:intron | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr6_3:63755291-63755310 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr6_3:63755291-63755310 | Msa0956450:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr6_3:63755292-63755311 | Msa0956450:intron | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr6_3:63755291-63755310 | None:intergenic | 0.0% |
| !! | AAACATAAACATATTAATAA+AGG | - | chr6_3:63754958-63754977 | None:intergenic | 10.0% |
| !! | AGTAAAAAAAATATAACAAA+AGG | + | chr6_3:63755084-63755103 | Msa0956450:intron | 10.0% |
| !! | ATATAGAGAATAATTAATTA+AGG | - | chr6_3:63755806-63755825 | None:intergenic | 10.0% |
| !! | TAAATAAGATTAAAATCTAA+GGG | - | chr6_3:63756178-63756197 | None:intergenic | 10.0% |
| !! | ATAAATAAGATTAAAATCTA+AGG | - | chr6_3:63756179-63756198 | None:intergenic | 10.0% |
| !! | AAACATAAACATATTAATAA+AGG | - | chr6_3:63754958-63754977 | None:intergenic | 10.0% |
| !! | AGTAAAAAAAATATAACAAA+AGG | + | chr6_3:63755084-63755103 | Msa0956450:intron | 10.0% |
| !! | ATATAGAGAATAATTAATTA+AGG | - | chr6_3:63755806-63755825 | None:intergenic | 10.0% |
| !! | TAAATAAGATTAAAATCTAA+GGG | - | chr6_3:63756178-63756197 | None:intergenic | 10.0% |
| !! | ATAAATAAGATTAAAATCTA+AGG | - | chr6_3:63756179-63756198 | None:intergenic | 10.0% |
| !! | TTCATATGTTTCAAAATATA+AGG | + | chr6_3:63754852-63754871 | Msa0956450:intron | 15.0% |
| !! | AAAAAATATAACAAAAGGTA+AGG | + | chr6_3:63755089-63755108 | Msa0956450:intron | 15.0% |
| !!! | ATAACCAATGTTTTAAAAAT+CGG | - | chr6_3:63755248-63755267 | None:intergenic | 15.0% |
| !! | AATGTAACTTAATTAAAAGA+AGG | + | chr6_3:63756088-63756107 | Msa0956450:intron | 15.0% |
| !! | TTCATATGTTTCAAAATATA+AGG | + | chr6_3:63754852-63754871 | Msa0956450:intron | 15.0% |
| !! | AAAAAATATAACAAAAGGTA+AGG | + | chr6_3:63755089-63755108 | Msa0956450:intron | 15.0% |
| !!! | ATAACCAATGTTTTAAAAAT+CGG | - | chr6_3:63755248-63755267 | None:intergenic | 15.0% |
| !! | AATGTAACTTAATTAAAAGA+AGG | + | chr6_3:63756088-63756107 | Msa0956450:intron | 15.0% |
| !! | ATTAATAAAGGTTGTTAGTT+AGG | - | chr6_3:63754946-63754965 | None:intergenic | 20.0% |
| !!! | ATTACGATTGTAACTTATTT+TGG | - | chr6_3:63755166-63755185 | None:intergenic | 20.0% |
| !!! | TTTTAAAACATTGGTTATAG+TGG | + | chr6_3:63755250-63755269 | Msa0956450:intron | 20.0% |
| !! | TATATATATATTCATGTCTC+AGG | - | chr6_3:63755282-63755301 | None:intergenic | 20.0% |
| !! | ATGATTAATATACCAAATGA+TGG | + | chr6_3:63755536-63755555 | Msa0956450:intron | 20.0% |
| !!! | TCTCTATATTTGTTAATCTA+AGG | + | chr6_3:63755817-63755836 | Msa0956450:intron | 20.0% |
| !! | TAATTTATTACATATGTGCA+TGG | + | chr6_3:63755938-63755957 | Msa0956450:intron | 20.0% |
| !! | ATTAATAAAGGTTGTTAGTT+AGG | - | chr6_3:63754946-63754965 | None:intergenic | 20.0% |
| !!! | ATTACGATTGTAACTTATTT+TGG | - | chr6_3:63755166-63755185 | None:intergenic | 20.0% |
| !!! | TTTTAAAACATTGGTTATAG+TGG | + | chr6_3:63755250-63755269 | Msa0956450:intron | 20.0% |
| !! | TATATATATATTCATGTCTC+AGG | - | chr6_3:63755282-63755301 | None:intergenic | 20.0% |
| !! | ATGATTAATATACCAAATGA+TGG | + | chr6_3:63755536-63755555 | Msa0956450:intron | 20.0% |
| !!! | TCTCTATATTTGTTAATCTA+AGG | + | chr6_3:63755817-63755836 | Msa0956450:intron | 20.0% |
| !! | TAATTTATTACATATGTGCA+TGG | + | chr6_3:63755938-63755957 | Msa0956450:intron | 20.0% |
| ! | TATTGTTATGAACAAACCAA+GGG | + | chr6_3:63754770-63754789 | Msa0956450:CDS | 25.0% |
| !!! | TCATTTTTTTTCTCACTAGA+AGG | - | chr6_3:63755045-63755064 | None:intergenic | 25.0% |
| ! | GCAAAGTTATTACTAAAAAG+TGG | - | chr6_3:63755420-63755439 | None:intergenic | 25.0% |
| !!! | AGTTTTATTATACAAACCAG+TGG | - | chr6_3:63755627-63755646 | None:intergenic | 25.0% |
| ! | ATTAAGGTTATATTGATCCT+AGG | - | chr6_3:63755790-63755809 | None:intergenic | 25.0% |
| ! | TTAAACAACTTGAGTTCAAT+TGG | + | chr6_3:63755884-63755903 | Msa0956450:intron | 25.0% |
| ! | TGAAAATGTTAAAATCCTCA+TGG | - | chr6_3:63755918-63755937 | None:intergenic | 25.0% |
| ! | TTACATGTATGGTTGTAAAA+AGG | - | chr6_3:63756054-63756073 | None:intergenic | 25.0% |
| ! | AAAATGCTAGATATCAAGAA+TGG | + | chr6_3:63756111-63756130 | Msa0956450:intron | 25.0% |
| ! | TTATTGGCCAACATTAATTT+CGG | + | chr6_3:63756263-63756282 | Msa0956450:intron | 25.0% |
| ! | ATAAGATGAAGACATATCTA+TGG | - | chr6_3:63756436-63756455 | None:intergenic | 25.0% |
| ! | TATTGTTATGAACAAACCAA+GGG | + | chr6_3:63754770-63754789 | Msa0956450:CDS | 25.0% |
| !!! | TCATTTTTTTTCTCACTAGA+AGG | - | chr6_3:63755045-63755064 | None:intergenic | 25.0% |
| ! | GCAAAGTTATTACTAAAAAG+TGG | - | chr6_3:63755420-63755439 | None:intergenic | 25.0% |
| !!! | AGTTTTATTATACAAACCAG+TGG | - | chr6_3:63755627-63755646 | None:intergenic | 25.0% |
| ! | ATTAAGGTTATATTGATCCT+AGG | - | chr6_3:63755790-63755809 | None:intergenic | 25.0% |
| ! | TTAAACAACTTGAGTTCAAT+TGG | + | chr6_3:63755884-63755903 | Msa0956450:intron | 25.0% |
| ! | TGAAAATGTTAAAATCCTCA+TGG | - | chr6_3:63755918-63755937 | None:intergenic | 25.0% |
| ! | TTACATGTATGGTTGTAAAA+AGG | - | chr6_3:63756054-63756073 | None:intergenic | 25.0% |
| ! | AAAATGCTAGATATCAAGAA+TGG | + | chr6_3:63756111-63756130 | Msa0956450:intron | 25.0% |
| ! | TTATTGGCCAACATTAATTT+CGG | + | chr6_3:63756263-63756282 | Msa0956450:intron | 25.0% |
| ! | ATAAGATGAAGACATATCTA+TGG | - | chr6_3:63756436-63756455 | None:intergenic | 25.0% |
| ! | GGTTTGTTCATAACAATAGA+AGG | - | chr6_3:63754768-63754787 | None:intergenic | 30.0% |
| CTATTGTTATGAACAAACCA+AGG | + | chr6_3:63754769-63754788 | Msa0956450:CDS | 30.0% | |
| TACATTAGTGACGTATCTAT+CGG | + | chr6_3:63754902-63754921 | Msa0956450:intron | 30.0% | |
| !!! | CCAAATCACGTTTTTTATCA+CGG | + | chr6_3:63754982-63755001 | Msa0956450:intron | 30.0% |
| !!! | GTAACTTATTTTGGTTGAAG+TGG | - | chr6_3:63755157-63755176 | None:intergenic | 30.0% |
| ATTGTTTGAACTAACTGGTT+CGG | + | chr6_3:63755221-63755240 | Msa0956450:intron | 30.0% | |
| CTAAAAGACACCTTCATAAA+AGG | + | chr6_3:63755439-63755458 | Msa0956450:intron | 30.0% | |
| GATCTACAAATTCCATCATT+TGG | - | chr6_3:63755551-63755570 | None:intergenic | 30.0% | |
| TTAAATCCTCAAGTTCTTAG+TGG | - | chr6_3:63755868-63755887 | None:intergenic | 30.0% | |
| CAATTGGAAAATAAACCATG+AGG | + | chr6_3:63755900-63755919 | Msa0956450:intron | 30.0% | |
| TGTGATGCAATTTACATGTA+TGG | - | chr6_3:63756065-63756084 | None:intergenic | 30.0% | |
| TGATGAATTCAAGAATGACA+TGG | + | chr6_3:63756141-63756160 | Msa0956450:intron | 30.0% | |
| TATTGGCCAACATTAATTTC+GGG | + | chr6_3:63756264-63756283 | Msa0956450:intron | 30.0% | |
| AATTGTCCCGAAATTAATGT+TGG | - | chr6_3:63756273-63756292 | None:intergenic | 30.0% | |
| TAGCATTGCTCTTAAAAGAA+TGG | + | chr6_3:63756318-63756337 | Msa0956450:intron | 30.0% | |
| ! | TGAAATTGTCTCTAGAAGAT+GGG | - | chr6_3:63756490-63756509 | None:intergenic | 30.0% |
| ! | TTGAAATTGTCTCTAGAAGA+TGG | - | chr6_3:63756491-63756510 | None:intergenic | 30.0% |
| ! | GGTTTGTTCATAACAATAGA+AGG | - | chr6_3:63754768-63754787 | None:intergenic | 30.0% |
| CTATTGTTATGAACAAACCA+AGG | + | chr6_3:63754769-63754788 | Msa0956450:CDS | 30.0% | |
| TACATTAGTGACGTATCTAT+CGG | + | chr6_3:63754902-63754921 | Msa0956450:intron | 30.0% | |
| !!! | CCAAATCACGTTTTTTATCA+CGG | + | chr6_3:63754982-63755001 | Msa0956450:intron | 30.0% |
| !!! | GTAACTTATTTTGGTTGAAG+TGG | - | chr6_3:63755157-63755176 | None:intergenic | 30.0% |
| ATTGTTTGAACTAACTGGTT+CGG | + | chr6_3:63755221-63755240 | Msa0956450:intron | 30.0% | |
| CTAAAAGACACCTTCATAAA+AGG | + | chr6_3:63755439-63755458 | Msa0956450:intron | 30.0% | |
| GATCTACAAATTCCATCATT+TGG | - | chr6_3:63755551-63755570 | None:intergenic | 30.0% | |
| TTAAATCCTCAAGTTCTTAG+TGG | - | chr6_3:63755868-63755887 | None:intergenic | 30.0% | |
| CAATTGGAAAATAAACCATG+AGG | + | chr6_3:63755900-63755919 | Msa0956450:intron | 30.0% | |
| TGTGATGCAATTTACATGTA+TGG | - | chr6_3:63756065-63756084 | None:intergenic | 30.0% | |
| TGATGAATTCAAGAATGACA+TGG | + | chr6_3:63756141-63756160 | Msa0956450:intron | 30.0% | |
| TATTGGCCAACATTAATTTC+GGG | + | chr6_3:63756264-63756283 | Msa0956450:intron | 30.0% | |
| AATTGTCCCGAAATTAATGT+TGG | - | chr6_3:63756273-63756292 | None:intergenic | 30.0% | |
| TAGCATTGCTCTTAAAAGAA+TGG | + | chr6_3:63756318-63756337 | Msa0956450:intron | 30.0% | |
| ! | TGAAATTGTCTCTAGAAGAT+GGG | - | chr6_3:63756490-63756509 | None:intergenic | 30.0% |
| ! | TTGAAATTGTCTCTAGAAGA+TGG | - | chr6_3:63756491-63756510 | None:intergenic | 30.0% |
| GTCACATTCATTCTTACACT+TGG | - | chr6_3:63754705-63754724 | None:intergenic | 35.0% | |
| !! | AACAAACCAAGGGTTGATAT+TGG | + | chr6_3:63754780-63754799 | Msa0956450:CDS | 35.0% |
| CATGAGATCTGCTTATACTT+TGG | + | chr6_3:63754812-63754831 | Msa0956450:CDS | 35.0% | |
| CCGTGATAAAAAACGTGATT+TGG | - | chr6_3:63754985-63755004 | None:intergenic | 35.0% | |
| GTTAGTTCAAACAATTACCC+AGG | - | chr6_3:63755216-63755235 | None:intergenic | 35.0% | |
| GGGTAATTGTTTGAACTAAC+TGG | + | chr6_3:63755216-63755235 | Msa0956450:intron | 35.0% | |
| !!! | CGGTCCGATTTTTAAAACAT+TGG | + | chr6_3:63755241-63755260 | Msa0956450:intron | 35.0% |
| TTGCTAAAAGACACCTTCAT+GGG | - | chr6_3:63755436-63755455 | None:intergenic | 35.0% | |
| ! | CTAGAAGACACCTTTTATGA+AGG | - | chr6_3:63755452-63755471 | None:intergenic | 35.0% |
| TCCTAGTGATCCACATTTAA+GGG | + | chr6_3:63755594-63755613 | Msa0956450:CDS | 35.0% | |
| TTTATTCCCTCTTACCAACT+TGG | + | chr6_3:63755688-63755707 | Msa0956450:intron | 35.0% | |
| !! | ATGATACCAAGTTGGTAAGA+GGG | - | chr6_3:63755697-63755716 | None:intergenic | 35.0% |
| ! | GCAAATTGATGATACCAAGT+TGG | - | chr6_3:63755705-63755724 | None:intergenic | 35.0% |
| ! | CTTTTACCACTAAGAACTTG+AGG | + | chr6_3:63755859-63755878 | Msa0956450:intron | 35.0% |
| AAGGGAATTAACTTTGATGC+AGG | + | chr6_3:63756365-63756384 | Msa0956450:intron | 35.0% | |
| TATCTATGGATTCCAATCAC+TGG | - | chr6_3:63756422-63756441 | None:intergenic | 35.0% | |
| TCATCTTATTCAAGCAGAGA+AGG | + | chr6_3:63756447-63756466 | Msa0956450:CDS | 35.0% | |
| ! | GAAATTGTCTCTAGAAGATG+GGG | - | chr6_3:63756489-63756508 | None:intergenic | 35.0% |
| CTAGAGACAATTTCAACACA+AGG | + | chr6_3:63756495-63756514 | Msa0956450:CDS | 35.0% | |
| GTCACATTCATTCTTACACT+TGG | - | chr6_3:63754705-63754724 | None:intergenic | 35.0% | |
| !! | AACAAACCAAGGGTTGATAT+TGG | + | chr6_3:63754780-63754799 | Msa0956450:CDS | 35.0% |
| CATGAGATCTGCTTATACTT+TGG | + | chr6_3:63754812-63754831 | Msa0956450:CDS | 35.0% | |
| CCGTGATAAAAAACGTGATT+TGG | - | chr6_3:63754985-63755004 | None:intergenic | 35.0% | |
| GTTAGTTCAAACAATTACCC+AGG | - | chr6_3:63755216-63755235 | None:intergenic | 35.0% | |
| GGGTAATTGTTTGAACTAAC+TGG | + | chr6_3:63755216-63755235 | Msa0956450:intron | 35.0% | |
| !!! | CGGTCCGATTTTTAAAACAT+TGG | + | chr6_3:63755241-63755260 | Msa0956450:intron | 35.0% |
| TTGCTAAAAGACACCTTCAT+GGG | - | chr6_3:63755436-63755455 | None:intergenic | 35.0% | |
| ! | CTAGAAGACACCTTTTATGA+AGG | - | chr6_3:63755452-63755471 | None:intergenic | 35.0% |
| TCCTAGTGATCCACATTTAA+GGG | + | chr6_3:63755594-63755613 | Msa0956450:CDS | 35.0% | |
| TTTATTCCCTCTTACCAACT+TGG | + | chr6_3:63755688-63755707 | Msa0956450:intron | 35.0% | |
| !! | ATGATACCAAGTTGGTAAGA+GGG | - | chr6_3:63755697-63755716 | None:intergenic | 35.0% |
| ! | GCAAATTGATGATACCAAGT+TGG | - | chr6_3:63755705-63755724 | None:intergenic | 35.0% |
| ! | CTTTTACCACTAAGAACTTG+AGG | + | chr6_3:63755859-63755878 | Msa0956450:intron | 35.0% |
| AAGGGAATTAACTTTGATGC+AGG | + | chr6_3:63756365-63756384 | Msa0956450:intron | 35.0% | |
| TATCTATGGATTCCAATCAC+TGG | - | chr6_3:63756422-63756441 | None:intergenic | 35.0% | |
| TCATCTTATTCAAGCAGAGA+AGG | + | chr6_3:63756447-63756466 | Msa0956450:CDS | 35.0% | |
| ! | GAAATTGTCTCTAGAAGATG+GGG | - | chr6_3:63756489-63756508 | None:intergenic | 35.0% |
| CTAGAGACAATTTCAACACA+AGG | + | chr6_3:63756495-63756514 | Msa0956450:CDS | 35.0% | |
| ATCACTCTTCCTACAGAAAG+TGG | - | chr6_3:63754657-63754676 | None:intergenic | 40.0% | |
| CTTTCTGTAGGAAGAGTGAT+AGG | + | chr6_3:63754657-63754676 | Msa0956450:CDS | 40.0% | |
| ! | ATGACCATTTGCAACTTGCT+TGG | - | chr6_3:63754736-63754755 | None:intergenic | 40.0% |
| !! | AAACCAAGGGTTGATATTGG+TGG | + | chr6_3:63754783-63754802 | Msa0956450:CDS | 40.0% |
| !! | ATCTATCGGCTTTGACGATT+TGG | + | chr6_3:63754916-63754935 | Msa0956450:intron | 40.0% |
| CAAAAGGTAAGGATGAGAAC+CGG | + | chr6_3:63755100-63755119 | Msa0956450:intron | 40.0% | |
| ! | TGGTTGAAGTGGATTTAACC+AGG | - | chr6_3:63755146-63755165 | None:intergenic | 40.0% |
| CAATGAACTTACTGCTTCCT+GGG | + | chr6_3:63755196-63755215 | Msa0956450:intron | 40.0% | |
| CTTGCTAAAAGACACCTTCA+TGG | - | chr6_3:63755376-63755395 | None:intergenic | 40.0% | |
| AAAGTGGAAATCACACCTTG+AGG | - | chr6_3:63755404-63755423 | None:intergenic | 40.0% | |
| AAATGTGGATCACTAGGACT+AGG | - | chr6_3:63755592-63755611 | None:intergenic | 40.0% | |
| GTCCTAGTGATCCACATTTA+AGG | + | chr6_3:63755593-63755612 | Msa0956450:CDS | 40.0% | |
| TCCCTTAAATGTGGATCACT+AGG | - | chr6_3:63755598-63755617 | None:intergenic | 40.0% | |
| TGGAGATGTTCCCTTAAATG+TGG | - | chr6_3:63755607-63755626 | None:intergenic | 40.0% | |
| ATTTAAGGGAACATCTCCAC+TGG | + | chr6_3:63755608-63755627 | Msa0956450:CDS | 40.0% | |
| !! | GATGATACCAAGTTGGTAAG+AGG | - | chr6_3:63755698-63755717 | None:intergenic | 40.0% |
| CTTGGTATCATCAATTTGCC+AGG | + | chr6_3:63755706-63755725 | Msa0956450:intron | 40.0% | |
| GTATCATCAATTTGCCAGGA+TGG | + | chr6_3:63755710-63755729 | Msa0956450:intron | 40.0% | |
| TGGAATATCTGTAACCATCC+TGG | - | chr6_3:63755727-63755746 | None:intergenic | 40.0% | |
| AGGATGGTTACAGATATTCC+AGG | + | chr6_3:63755726-63755745 | Msa0956450:intron | 40.0% | |
| CTAACCAAAAGAGACATCTG+TGG | - | chr6_3:63755754-63755773 | None:intergenic | 40.0% | |
| TTGATCCTAGGATAGAGAGA+GGG | - | chr6_3:63755778-63755797 | None:intergenic | 40.0% | |
| ATTGATCCTAGGATAGAGAG+AGG | - | chr6_3:63755779-63755798 | None:intergenic | 40.0% | |
| TGATGCAGGAAATGAGATTG+TGG | + | chr6_3:63756379-63756398 | Msa0956450:intron | 40.0% | |
| TTCTCACAGGAGAATAACCT+TGG | + | chr6_3:63756521-63756540 | Msa0956450:CDS | 40.0% | |
| TTGAAGTAAACTGCAGCAAC+AGG | - | chr6_3:63756551-63756570 | None:intergenic | 40.0% | |
| ATCACTCTTCCTACAGAAAG+TGG | - | chr6_3:63754657-63754676 | None:intergenic | 40.0% | |
| CTTTCTGTAGGAAGAGTGAT+AGG | + | chr6_3:63754657-63754676 | Msa0956450:CDS | 40.0% | |
| ! | ATGACCATTTGCAACTTGCT+TGG | - | chr6_3:63754736-63754755 | None:intergenic | 40.0% |
| !! | AAACCAAGGGTTGATATTGG+TGG | + | chr6_3:63754783-63754802 | Msa0956450:CDS | 40.0% |
| !! | ATCTATCGGCTTTGACGATT+TGG | + | chr6_3:63754916-63754935 | Msa0956450:intron | 40.0% |
| CAAAAGGTAAGGATGAGAAC+CGG | + | chr6_3:63755100-63755119 | Msa0956450:intron | 40.0% | |
| ! | TGGTTGAAGTGGATTTAACC+AGG | - | chr6_3:63755146-63755165 | None:intergenic | 40.0% |
| CAATGAACTTACTGCTTCCT+GGG | + | chr6_3:63755196-63755215 | Msa0956450:intron | 40.0% | |
| CTTGCTAAAAGACACCTTCA+TGG | - | chr6_3:63755376-63755395 | None:intergenic | 40.0% | |
| AAAGTGGAAATCACACCTTG+AGG | - | chr6_3:63755404-63755423 | None:intergenic | 40.0% | |
| AAATGTGGATCACTAGGACT+AGG | - | chr6_3:63755592-63755611 | None:intergenic | 40.0% | |
| GTCCTAGTGATCCACATTTA+AGG | + | chr6_3:63755593-63755612 | Msa0956450:CDS | 40.0% | |
| TCCCTTAAATGTGGATCACT+AGG | - | chr6_3:63755598-63755617 | None:intergenic | 40.0% | |
| TGGAGATGTTCCCTTAAATG+TGG | - | chr6_3:63755607-63755626 | None:intergenic | 40.0% | |
| ATTTAAGGGAACATCTCCAC+TGG | + | chr6_3:63755608-63755627 | Msa0956450:CDS | 40.0% | |
| !! | GATGATACCAAGTTGGTAAG+AGG | - | chr6_3:63755698-63755717 | None:intergenic | 40.0% |
| CTTGGTATCATCAATTTGCC+AGG | + | chr6_3:63755706-63755725 | Msa0956450:intron | 40.0% | |
| GTATCATCAATTTGCCAGGA+TGG | + | chr6_3:63755710-63755729 | Msa0956450:intron | 40.0% | |
| TGGAATATCTGTAACCATCC+TGG | - | chr6_3:63755727-63755746 | None:intergenic | 40.0% | |
| AGGATGGTTACAGATATTCC+AGG | + | chr6_3:63755726-63755745 | Msa0956450:intron | 40.0% | |
| CTAACCAAAAGAGACATCTG+TGG | - | chr6_3:63755754-63755773 | None:intergenic | 40.0% | |
| TTGATCCTAGGATAGAGAGA+GGG | - | chr6_3:63755778-63755797 | None:intergenic | 40.0% | |
| ATTGATCCTAGGATAGAGAG+AGG | - | chr6_3:63755779-63755798 | None:intergenic | 40.0% | |
| TGATGCAGGAAATGAGATTG+TGG | + | chr6_3:63756379-63756398 | Msa0956450:intron | 40.0% | |
| TTCTCACAGGAGAATAACCT+TGG | + | chr6_3:63756521-63756540 | Msa0956450:CDS | 40.0% | |
| TTGAAGTAAACTGCAGCAAC+AGG | - | chr6_3:63756551-63756570 | None:intergenic | 40.0% | |
| CCTACAGAAAGTGGTTCCAA+TGG | - | chr6_3:63754648-63754667 | None:intergenic | 45.0% | |
| CCATTGGAACCACTTTCTGT+AGG | + | chr6_3:63754645-63754664 | Msa0956450:CDS | 45.0% | |
| TCCACCAAGCAAGTTGCAAA+TGG | + | chr6_3:63754729-63754748 | Msa0956450:CDS | 45.0% | |
| ! | ACCATTTGCAACTTGCTTGG+TGG | - | chr6_3:63754733-63754752 | None:intergenic | 45.0% |
| TCACCACCAATATCAACCCT+TGG | - | chr6_3:63754789-63754808 | None:intergenic | 45.0% | |
| ! | TAAACCGCAGTTGGTTCAAC+CGG | - | chr6_3:63755122-63755141 | None:intergenic | 45.0% |
| TAACCAGGTTAAACCGCAGT+TGG | - | chr6_3:63755131-63755150 | None:intergenic | 45.0% | |
| CCAGGAAGCAGTAAGTTCAT+TGG | - | chr6_3:63755198-63755217 | None:intergenic | 45.0% | |
| CCAATGAACTTACTGCTTCC+TGG | + | chr6_3:63755195-63755214 | Msa0956450:intron | 45.0% | |
| CTAAAAGACACCTTCATGGG+TGG | - | chr6_3:63755372-63755391 | None:intergenic | 45.0% | |
| ! | TTTTAGCAAGCCCTACCTCA+AGG | + | chr6_3:63755386-63755405 | Msa0956450:intron | 45.0% |
| GGAAATCACACCTTGAGGTA+GGG | - | chr6_3:63755399-63755418 | None:intergenic | 45.0% | |
| TGGAAATCACACCTTGAGGT+AGG | - | chr6_3:63755400-63755419 | None:intergenic | 45.0% | |
| AAAGAGACATCTGTGGTACC+TGG | - | chr6_3:63755747-63755766 | None:intergenic | 45.0% | |
| ! | GGTACCACAGATGTCTCTTT+TGG | + | chr6_3:63755747-63755766 | Msa0956450:CDS | 45.0% |
| TTAGTCCCTCTCTCTATCCT+AGG | + | chr6_3:63755770-63755789 | Msa0956450:intron | 45.0% | |
| CAATAAAATCTCAGCCTGGC+CGG | - | chr6_3:63756249-63756268 | None:intergenic | 45.0% | |
| TGGCCAATAAAATCTCAGCC+TGG | - | chr6_3:63756253-63756272 | None:intergenic | 45.0% | |
| GAGAATCCAAAGCCAGTGAT+TGG | + | chr6_3:63756407-63756426 | Msa0956450:CDS | 45.0% | |
| !! | TGGATTCCAATCACTGGCTT+TGG | - | chr6_3:63756416-63756435 | None:intergenic | 45.0% |
| CAACACAAGGAGATTCTCAC+AGG | + | chr6_3:63756508-63756527 | Msa0956450:CDS | 45.0% | |
| GAGAAACTGCAGCAAGAAGA+AGG | + | chr6_3:63756579-63756598 | Msa0956450:CDS | 45.0% | |
| CCTACAGAAAGTGGTTCCAA+TGG | - | chr6_3:63754648-63754667 | None:intergenic | 45.0% | |
| CCATTGGAACCACTTTCTGT+AGG | + | chr6_3:63754645-63754664 | Msa0956450:CDS | 45.0% | |
| TCCACCAAGCAAGTTGCAAA+TGG | + | chr6_3:63754729-63754748 | Msa0956450:CDS | 45.0% | |
| ! | ACCATTTGCAACTTGCTTGG+TGG | - | chr6_3:63754733-63754752 | None:intergenic | 45.0% |
| TCACCACCAATATCAACCCT+TGG | - | chr6_3:63754789-63754808 | None:intergenic | 45.0% | |
| ! | TAAACCGCAGTTGGTTCAAC+CGG | - | chr6_3:63755122-63755141 | None:intergenic | 45.0% |
| TAACCAGGTTAAACCGCAGT+TGG | - | chr6_3:63755131-63755150 | None:intergenic | 45.0% | |
| CCAGGAAGCAGTAAGTTCAT+TGG | - | chr6_3:63755198-63755217 | None:intergenic | 45.0% | |
| CCAATGAACTTACTGCTTCC+TGG | + | chr6_3:63755195-63755214 | Msa0956450:intron | 45.0% | |
| CTAAAAGACACCTTCATGGG+TGG | - | chr6_3:63755372-63755391 | None:intergenic | 45.0% | |
| ! | TTTTAGCAAGCCCTACCTCA+AGG | + | chr6_3:63755386-63755405 | Msa0956450:intron | 45.0% |
| GGAAATCACACCTTGAGGTA+GGG | - | chr6_3:63755399-63755418 | None:intergenic | 45.0% | |
| TGGAAATCACACCTTGAGGT+AGG | - | chr6_3:63755400-63755419 | None:intergenic | 45.0% | |
| AAAGAGACATCTGTGGTACC+TGG | - | chr6_3:63755747-63755766 | None:intergenic | 45.0% | |
| ! | GGTACCACAGATGTCTCTTT+TGG | + | chr6_3:63755747-63755766 | Msa0956450:CDS | 45.0% |
| TTAGTCCCTCTCTCTATCCT+AGG | + | chr6_3:63755770-63755789 | Msa0956450:intron | 45.0% | |
| CAATAAAATCTCAGCCTGGC+CGG | - | chr6_3:63756249-63756268 | None:intergenic | 45.0% | |
| TGGCCAATAAAATCTCAGCC+TGG | - | chr6_3:63756253-63756272 | None:intergenic | 45.0% | |
| GAGAATCCAAAGCCAGTGAT+TGG | + | chr6_3:63756407-63756426 | Msa0956450:CDS | 45.0% | |
| !! | TGGATTCCAATCACTGGCTT+TGG | - | chr6_3:63756416-63756435 | None:intergenic | 45.0% |
| CAACACAAGGAGATTCTCAC+AGG | + | chr6_3:63756508-63756527 | Msa0956450:CDS | 45.0% | |
| GAGAAACTGCAGCAAGAAGA+AGG | + | chr6_3:63756579-63756598 | Msa0956450:CDS | 45.0% | |
| !!! | ATAATTTAATTTTTTAACAA+AGG | + | chr6_3:63756346-63756365 | Msa0956450:intron | 5.0% |
| !!! | TAATTTAATTTTTTAACAAA+GGG | + | chr6_3:63756347-63756366 | Msa0956450:intron | 5.0% |
| !!! | ATAATTTAATTTTTTAACAA+AGG | + | chr6_3:63756346-63756365 | Msa0956450:intron | 5.0% |
| !!! | TAATTTAATTTTTTAACAAA+GGG | + | chr6_3:63756347-63756366 | Msa0956450:intron | 5.0% |
| AGAACCGGTTGAACCAACTG+CGG | + | chr6_3:63755115-63755134 | Msa0956450:intron | 50.0% | |
| GAACCAACTGCGGTTTAACC+TGG | + | chr6_3:63755125-63755144 | Msa0956450:intron | 50.0% | |
| TTGCTAGAAGCCACCCATGA+AGG | + | chr6_3:63755359-63755378 | Msa0956450:intron | 50.0% | |
| !! | CACTAGGACTAGGAGCATCT+GGG | - | chr6_3:63755582-63755601 | None:intergenic | 50.0% |
| !! | TCACTAGGACTAGGAGCATC+TGG | - | chr6_3:63755583-63755602 | None:intergenic | 50.0% |
| ! | CGGCCAGGCTGAGATTTTAT+TGG | + | chr6_3:63756247-63756266 | Msa0956450:intron | 50.0% |
| CTGCAGCAACAGGTAAACCA+AGG | - | chr6_3:63756541-63756560 | None:intergenic | 50.0% | |
| AGAACCGGTTGAACCAACTG+CGG | + | chr6_3:63755115-63755134 | Msa0956450:intron | 50.0% | |
| GAACCAACTGCGGTTTAACC+TGG | + | chr6_3:63755125-63755144 | Msa0956450:intron | 50.0% | |
| TTGCTAGAAGCCACCCATGA+AGG | + | chr6_3:63755359-63755378 | Msa0956450:intron | 50.0% | |
| !! | CACTAGGACTAGGAGCATCT+GGG | - | chr6_3:63755582-63755601 | None:intergenic | 50.0% |
| !! | TCACTAGGACTAGGAGCATC+TGG | - | chr6_3:63755583-63755602 | None:intergenic | 50.0% |
| ! | CGGCCAGGCTGAGATTTTAT+TGG | + | chr6_3:63756247-63756266 | Msa0956450:intron | 50.0% |
| CTGCAGCAACAGGTAAACCA+AGG | - | chr6_3:63756541-63756560 | None:intergenic | 50.0% | |
| ACCCACCACCCCATGATTTC+CGG | + | chr6_3:63756227-63756246 | Msa0956450:intron | 55.0% | |
| TCAGCCTGGCCGGAAATCAT+GGG | - | chr6_3:63756239-63756258 | None:intergenic | 55.0% | |
| ACCCACCACCCCATGATTTC+CGG | + | chr6_3:63756227-63756246 | Msa0956450:intron | 55.0% | |
| TCAGCCTGGCCGGAAATCAT+GGG | - | chr6_3:63756239-63756258 | None:intergenic | 55.0% | |
| GCCGGAAATCATGGGGTGGT+GGG | - | chr6_3:63756231-63756250 | None:intergenic | 60.0% | |
| CAGCCTGGCCGGAAATCATG+GGG | - | chr6_3:63756238-63756257 | None:intergenic | 60.0% | |
| CTCAGCCTGGCCGGAAATCA+TGG | - | chr6_3:63756240-63756259 | None:intergenic | 60.0% | |
| GCCGGAAATCATGGGGTGGT+GGG | - | chr6_3:63756231-63756250 | None:intergenic | 60.0% | |
| CAGCCTGGCCGGAAATCATG+GGG | - | chr6_3:63756238-63756257 | None:intergenic | 60.0% | |
| CTCAGCCTGGCCGGAAATCA+TGG | - | chr6_3:63756240-63756259 | None:intergenic | 60.0% | |
| GGCCGGAAATCATGGGGTGG+TGG | - | chr6_3:63756232-63756251 | None:intergenic | 65.0% | |
| CCTGGCCGGAAATCATGGGG+TGG | - | chr6_3:63756235-63756254 | None:intergenic | 65.0% | |
| CCACCCCATGATTTCCGGCC+AGG | + | chr6_3:63756232-63756251 | Msa0956450:intron | 65.0% | |
| GGCCGGAAATCATGGGGTGG+TGG | - | chr6_3:63756232-63756251 | None:intergenic | 65.0% | |
| CCTGGCCGGAAATCATGGGG+TGG | - | chr6_3:63756235-63756254 | None:intergenic | 65.0% | |
| CCACCCCATGATTTCCGGCC+AGG | + | chr6_3:63756232-63756251 | Msa0956450:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 63754636 | 63756604 | 63754636 | ID=Msa0956450;Name=Msa0956450 |
| chr6_3 | mRNA | 63754636 | 63756604 | 63754636 | ID=Msa0956450-mRNA-1;Parent=Msa0956450;Name=Msa0956450-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|4|0|172 |
| chr6_3 | exon | 63754636 | 63754833 | 63754636 | ID=Msa0956450-mRNA-1:exon:12153;Parent=Msa0956450-mRNA-1 |
| chr6_3 | exon | 63755568 | 63755629 | 63755568 | ID=Msa0956450-mRNA-1:exon:12154;Parent=Msa0956450-mRNA-1 |
| chr6_3 | exon | 63755728 | 63755768 | 63755728 | ID=Msa0956450-mRNA-1:exon:12155;Parent=Msa0956450-mRNA-1 |
| chr6_3 | exon | 63756387 | 63756604 | 63756387 | ID=Msa0956450-mRNA-1:exon:12156;Parent=Msa0956450-mRNA-1 |
| chr6_3 | CDS | 63754636 | 63754833 | 63754636 | ID=Msa0956450-mRNA-1:cds;Parent=Msa0956450-mRNA-1 |
| chr6_3 | CDS | 63755568 | 63755629 | 63755568 | ID=Msa0956450-mRNA-1:cds;Parent=Msa0956450-mRNA-1 |
| chr6_3 | CDS | 63755728 | 63755768 | 63755728 | ID=Msa0956450-mRNA-1:cds;Parent=Msa0956450-mRNA-1 |
| chr6_3 | CDS | 63756387 | 63756604 | 63756387 | ID=Msa0956450-mRNA-1:cds;Parent=Msa0956450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
