Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921180 | XP_013452629.1 | 85.479 | 365 | 18 | 2 | 1 | 330 | 1 | 365 | 0.0 | 625 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921180 | sp|Q9SZ83|Y4967_ARATH | 48.619 | 362 | 148 | 4 | 1 | 327 | 1 | 359 | 3.05e-125 | 366 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0921180 | 0.863534 | 2.325202e-64 | -8.615850e-47 |
| Msa0014590 | Msa0921180 | 0.802148 | 6.438080e-49 | -8.615850e-47 |
| Msa0027860 | Msa0921180 | 0.813522 | 2.452587e-51 | -8.615850e-47 |
| Msa0059880 | Msa0921180 | 0.815701 | 8.077536e-52 | -8.615850e-47 |
| Msa0063540 | Msa0921180 | 0.816908 | 4.338539e-52 | -8.615850e-47 |
| Msa0108350 | Msa0921180 | 0.802206 | 6.261324e-49 | -8.615850e-47 |
| Msa0609460 | Msa0921180 | 0.815887 | 7.342096e-52 | -8.615850e-47 |
| Msa0616300 | Msa0921180 | 0.808327 | 3.269846e-50 | -8.615850e-47 |
| Msa0631700 | Msa0921180 | 0.811445 | 6.975976e-51 | -8.615850e-47 |
| Msa0632980 | Msa0921180 | 0.841893 | 3.604244e-58 | -8.615850e-47 |
| Msa0643840 | Msa0921180 | 0.809417 | 1.911787e-50 | -8.615850e-47 |
| Msa0650100 | Msa0921180 | 0.815372 | 9.564452e-52 | -8.615850e-47 |
| Msa0670360 | Msa0921180 | 0.842956 | 1.884000e-58 | -8.615850e-47 |
| Msa0671640 | Msa0921180 | 0.815403 | 9.410130e-52 | -8.615850e-47 |
| Msa0692090 | Msa0921180 | 0.825527 | 4.465039e-54 | -8.615850e-47 |
| Msa0715220 | Msa0921180 | 0.820199 | 7.780460e-53 | -8.615850e-47 |
| Msa0735140 | Msa0921180 | 0.801270 | 9.746142e-49 | -8.615850e-47 |
| Msa0777070 | Msa0921180 | 0.804449 | 2.149117e-49 | -8.615850e-47 |
| Msa0786940 | Msa0921180 | 0.827217 | 1.767713e-54 | -8.615850e-47 |
| Msa0806930 | Msa0921180 | 0.809760 | 1.613685e-50 | -8.615850e-47 |
| Msa0814160 | Msa0921180 | 0.847159 | 1.379757e-59 | -8.615850e-47 |
| Msa0814230 | Msa0921180 | 0.800013 | 1.758486e-48 | -8.615850e-47 |
| Msa0822410 | Msa0921180 | 0.827277 | 1.709478e-54 | -8.615850e-47 |
| Msa0831890 | Msa0921180 | 0.805607 | 1.230253e-49 | -8.615850e-47 |
| Msa0123530 | Msa0921180 | 0.803905 | 2.789261e-49 | -8.615850e-47 |
| Msa0142560 | Msa0921180 | 0.806126 | 9.568024e-50 | -8.615850e-47 |
| Msa0150910 | Msa0921180 | 0.840946 | 6.398390e-58 | -8.615850e-47 |
| Msa0150920 | Msa0921180 | 0.854221 | 1.421785e-61 | -8.615850e-47 |
| Msa0168010 | Msa0921180 | 0.804730 | 1.877142e-49 | -8.615850e-47 |
| Msa0195580 | Msa0921180 | 0.807946 | 3.942491e-50 | -8.615850e-47 |
| Msa0207640 | Msa0921180 | 0.808049 | 3.747628e-50 | -8.615850e-47 |
| Msa0209060 | Msa0921180 | 0.860431 | 2.075223e-63 | -8.615850e-47 |
| Msa0220090 | Msa0921180 | 0.809196 | 2.132115e-50 | -8.615850e-47 |
| Msa0366510 | Msa0921180 | 0.828632 | 8.071748e-55 | -8.615850e-47 |
| Msa0374040 | Msa0921180 | 0.825683 | 4.100606e-54 | -8.615850e-47 |
| Msa0380680 | Msa0921180 | 0.810289 | 1.241432e-50 | -8.615850e-47 |
| Msa0391270 | Msa0921180 | 0.823332 | 1.466324e-53 | -8.615850e-47 |
| Msa0396790 | Msa0921180 | 0.811225 | 7.787888e-51 | -8.615850e-47 |
| Msa0414480 | Msa0921180 | 0.804743 | 1.865761e-49 | -8.615850e-47 |
| Msa0464310 | Msa0921180 | 0.815122 | 1.086627e-51 | -8.615850e-47 |
| Msa0469450 | Msa0921180 | 0.806837 | 6.776403e-50 | -8.615850e-47 |
| Msa0242830 | Msa0921180 | 0.811200 | 7.884979e-51 | -8.615850e-47 |
| Msa0261400 | Msa0921180 | 0.809024 | 2.321270e-50 | -8.615850e-47 |
| Msa0272210 | Msa0921180 | 0.810482 | 1.127437e-50 | -8.615850e-47 |
| Msa0274250 | Msa0921180 | 0.802762 | 4.809357e-49 | -8.615850e-47 |
| Msa0274260 | Msa0921180 | 0.802935 | 4.429431e-49 | -8.615850e-47 |
| Msa0281190 | Msa0921180 | 0.843003 | 1.830268e-58 | -8.615850e-47 |
| Msa0287630 | Msa0921180 | 0.805622 | 1.221210e-49 | -8.615850e-47 |
| Msa0288540 | Msa0921180 | 0.867448 | 1.358924e-65 | -8.615850e-47 |
| Msa0299030 | Msa0921180 | 0.804902 | 1.728339e-49 | -8.615850e-47 |
| Msa0326770 | Msa0921180 | 0.873813 | 1.098799e-67 | -8.615850e-47 |
| Msa0349910 | Msa0921180 | 0.808846 | 2.533811e-50 | -8.615850e-47 |
| Msa0490060 | Msa0921180 | 0.802056 | 6.722589e-49 | -8.615850e-47 |
| Msa0491950 | Msa0921180 | 0.807476 | 4.962177e-50 | -8.615850e-47 |
| Msa0515130 | Msa0921180 | 0.820161 | 7.940063e-53 | -8.615850e-47 |
| Msa0515150 | Msa0921180 | 0.815457 | 9.155787e-52 | -8.615850e-47 |
| Msa0535570 | Msa0921180 | 0.840654 | 7.632095e-58 | -8.615850e-47 |
| Msa0536770 | Msa0921180 | 0.821007 | 5.075929e-53 | -8.615850e-47 |
| Msa0555920 | Msa0921180 | 0.828782 | 7.425902e-55 | -8.615850e-47 |
| Msa0591490 | Msa0921180 | 0.842919 | 1.926729e-58 | -8.615850e-47 |
| Msa0594630 | Msa0921180 | 0.829495 | 4.984890e-55 | -8.615850e-47 |
| Msa0854840 | Msa0921180 | 0.820406 | 6.975294e-53 | -8.615850e-47 |
| Msa0856740 | Msa0921180 | 0.805564 | 1.255849e-49 | -8.615850e-47 |
| Msa0861730 | Msa0921180 | 0.861237 | 1.181550e-63 | -8.615850e-47 |
| Msa0896920 | Msa0921180 | 0.825970 | 3.505229e-54 | -8.615850e-47 |
| Msa0913550 | Msa0921180 | 0.842465 | 2.543306e-58 | -8.615850e-47 |
| Msa0921180 | Msa0946010 | 0.862218 | 5.921309e-64 | -8.615850e-47 |
| Msa0921180 | Msa0951150 | 0.837679 | 4.508104e-57 | -8.615850e-47 |
| Msa0921180 | Msa0956450 | 0.823330 | 1.468290e-53 | -8.615850e-47 |
| Msa0921180 | Msa0959700 | 0.877633 | 5.372974e-69 | -8.615850e-47 |
| Msa0921180 | Msa0964510 | 0.803654 | 3.144943e-49 | -8.615850e-47 |
| Msa0921180 | Msa0987640 | 0.845268 | 4.515900e-59 | -8.615850e-47 |
| Msa0921180 | Msa0995110 | 0.861527 | 9.634322e-64 | -8.615850e-47 |
| Msa0921180 | Msa0996980 | 0.816277 | 6.007609e-52 | -8.615850e-47 |
| Msa0921180 | Msa1006170 | 0.840147 | 1.036053e-57 | -8.615850e-47 |
| Msa0921180 | Msa1018590 | 0.831485 | 1.625705e-55 | -8.615850e-47 |
| Msa0921180 | Msa1022490 | 0.818321 | 2.084020e-52 | -8.615850e-47 |
| Msa0921180 | Msa1022510 | 0.829109 | 6.186186e-55 | -8.615850e-47 |
| Msa0921180 | Msa1030320 | 0.815690 | 8.124449e-52 | -8.615850e-47 |
| Msa0921180 | Msa1048350 | 0.815990 | 6.965743e-52 | -8.615850e-47 |
| Msa0921180 | Msa1061670 | 0.807360 | 5.250256e-50 | -8.615850e-47 |
| Msa0921180 | Msa1068080 | 0.820046 | 8.433315e-53 | -8.615850e-47 |
| Msa0921180 | Msa1069010 | 0.803538 | 3.323396e-49 | -8.615850e-47 |
| Msa0921180 | Msa1069350 | 0.825397 | 4.794700e-54 | -8.615850e-47 |
| Msa0921180 | Msa1087380 | 0.819151 | 1.349915e-52 | -8.615850e-47 |
| Msa0921180 | Msa1100030 | 0.828029 | 1.127870e-54 | -8.615850e-47 |
| Msa0921180 | Msa1106680 | 0.835429 | 1.686639e-56 | -8.615850e-47 |
| Msa0921180 | Msa1106960 | 0.802657 | 5.056422e-49 | -8.615850e-47 |
| Msa0921180 | Msa1108560 | 0.803799 | 2.933910e-49 | -8.615850e-47 |
| Msa0921180 | Msa1120680 | 0.808655 | 2.783375e-50 | -8.615850e-47 |
| Msa0921180 | Msa1148210 | 0.833440 | 5.328349e-56 | -8.615850e-47 |
| Msa0921180 | Msa1156240 | 0.823005 | 1.748546e-53 | -8.615850e-47 |
| Msa0921180 | Msa1157210 | 0.821702 | 3.509302e-53 | -8.615850e-47 |
| Msa0921180 | Msa1170340 | 0.809777 | 1.600412e-50 | -8.615850e-47 |
| Msa0921180 | Msa1181090 | 0.843501 | 1.348295e-58 | -8.615850e-47 |
| Msa0921180 | Msa1188080 | 0.801444 | 8.979585e-49 | -8.615850e-47 |
| Msa0921180 | Msa1205910 | 0.811511 | 6.748722e-51 | -8.615850e-47 |
| Msa0921180 | Msa1225850 | 0.809751 | 1.620815e-50 | -8.615850e-47 |
| Msa0921180 | Msa1231720 | 0.808477 | 3.038798e-50 | -8.615850e-47 |
| Msa0921180 | Msa1253750 | 0.807957 | 3.920618e-50 | -8.615850e-47 |
| Msa0921180 | Msa1294020 | 0.809870 | 1.527952e-50 | -8.615850e-47 |
| Msa0921180 | Msa1323080 | 0.800964 | 1.125689e-48 | -8.615850e-47 |
| Msa0921180 | Msa1350870 | 0.815935 | 7.163390e-52 | -8.615850e-47 |
| Msa0921180 | Msa1355340 | 0.810076 | 1.379935e-50 | -8.615850e-47 |
| Msa0921180 | Msa1411550 | 0.812228 | 4.710775e-51 | -8.615850e-47 |
| Msa0921180 | Msa1445890 | 0.844918 | 5.614868e-59 | -8.615850e-47 |
| Msa0921180 | Msa1453650 | 0.805987 | 1.023617e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921180 | MtrunA17_Chr6g0477771 | 85.479 | 365 | 18 | 2 | 1 | 330 | 1 | 365 | 0.0 | 625 |
| Msa0921180 | MtrunA17_Chr6g0464971 | 49.438 | 356 | 142 | 4 | 7 | 327 | 9 | 361 | 1.44e-120 | 351 |
| Msa0921180 | MtrunA17_Chr6g0465111 | 47.383 | 363 | 151 | 4 | 1 | 327 | 1 | 359 | 4.45e-118 | 345 |
| Msa0921180 | MtrunA17_Chr6g0465121 | 46.133 | 362 | 152 | 4 | 1 | 327 | 14 | 367 | 1.01e-114 | 337 |
| Msa0921180 | MtrunA17_Chr6g0464961 | 48.876 | 356 | 144 | 4 | 7 | 327 | 31 | 383 | 2.05e-114 | 338 |
| Msa0921180 | MtrunA17_Chr1g0200981 | 48.066 | 362 | 144 | 5 | 4 | 327 | 3 | 358 | 1.03e-113 | 333 |
| Msa0921180 | MtrunA17_Chr3g0110001 | 44.809 | 366 | 160 | 5 | 1 | 327 | 1 | 363 | 3.72e-104 | 309 |
| Msa0921180 | MtrunA17_Chr6g0464931 | 59.804 | 102 | 35 | 1 | 7 | 102 | 9 | 110 | 2.50e-34 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921180 | AT4G09670.1 | 48.619 | 362 | 148 | 4 | 1 | 327 | 1 | 359 | 3.10e-126 | 366 |
| Msa0921180 | AT1G34200.1 | 43.490 | 361 | 154 | 5 | 1 | 325 | 1 | 347 | 3.25e-99 | 296 |
| Msa0921180 | AT1G66130.1 | 38.187 | 364 | 188 | 6 | 1 | 327 | 1 | 364 | 6.02e-84 | 258 |
Find 77 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTTTGATGTAACAATTT+TGG | 0.095575 | 6_2:+58086025 | Msa0921180:CDS |
| TACATTGTCTTCATTGAATA+TGG | 0.198345 | 6_2:-58085925 | None:intergenic |
| CCGGAGGCGGTTAGGGTTTA+CGG | 0.230120 | 6_2:+58079763 | Msa0921180:CDS |
| TCAAGATGTTTGGATGATTA+AGG | 0.243300 | 6_2:+58086208 | Msa0921180:CDS |
| AAGGGTTGCCGGAGGCGGTT+AGG | 0.253932 | 6_2:+58079755 | Msa0921180:CDS |
| TCTTCATTGAATATGGCTTT+TGG | 0.265245 | 6_2:-58085918 | None:intergenic |
| AGCATTTGGTGCTTTGCTTA+TGG | 0.271308 | 6_2:-58079674 | None:intergenic |
| GGCTAATGGAGTGCAGTTTA+TGG | 0.275677 | 6_2:+58079960 | Msa0921180:CDS |
| GATTAAGGAGTTTGCTGATT+TGG | 0.308124 | 6_2:+58086223 | Msa0921180:CDS |
| GTTGTGCGGTTTGGTATTCT+TGG | 0.331462 | 6_2:+58079619 | Msa0921180:CDS |
| AGCCATTGGAAGCCGTTCTT+TGG | 0.342794 | 6_2:+58079705 | Msa0921180:CDS |
| CGGAGGCGGTTAGGGTTTAC+GGG | 0.357369 | 6_2:+58079764 | Msa0921180:CDS |
| GGAAATGCAAGAACTGATTT+CGG | 0.358649 | 6_2:-58085897 | None:intergenic |
| CTTGAAGCTTGTGAGGCTAA+TGG | 0.375758 | 6_2:+58079946 | Msa0921180:CDS |
| TTAGATGGTCTTGGTGCTCT+TGG | 0.386813 | 6_2:+58085819 | Msa0921180:CDS |
| TGCGGCGGAGCAAGGGTTGC+CGG | 0.387440 | 6_2:+58079744 | Msa0921180:CDS |
| CTTGGTGCTCTTGGTGACAT+AGG | 0.392156 | 6_2:+58085828 | Msa0921180:CDS |
| AGGGTTGCCGGAGGCGGTTA+GGG | 0.405420 | 6_2:+58079756 | Msa0921180:CDS |
| TCTTCATTACATTGGGAAGA+TGG | 0.417291 | 6_2:+58085963 | Msa0921180:CDS |
| TTGTGGTTCTTCATTACATT+GGG | 0.418527 | 6_2:+58085956 | Msa0921180:CDS |
| ATTTGGTTGGTAAAATTAAG+AGG | 0.430604 | 6_2:+58086240 | Msa0921180:CDS |
| TTTGAAGAGAGTTTAGGGTT+TGG | 0.434400 | 6_2:+58086089 | Msa0921180:CDS |
| GGAGCAAGGGTTGCCGGAGG+CGG | 0.434934 | 6_2:+58079750 | Msa0921180:CDS |
| GCATATGATGTGGGCTATCA+AGG | 0.436010 | 6_2:+58079852 | Msa0921180:CDS |
| AACAAGGTAGGTGGTGTCCT+AGG | 0.439450 | 6_2:+58086153 | Msa0921180:CDS |
| GGTTGGTAAAATTAAGAGGT+TGG | 0.443098 | 6_2:+58086244 | Msa0921180:CDS |
| AAACCAGATTTAGATGGTCT+TGG | 0.445743 | 6_2:+58085810 | Msa0921180:intron |
| CTTGTGGTTCTTCATTACAT+TGG | 0.452582 | 6_2:+58085955 | Msa0921180:CDS |
| GGCTATCAAGGCCGCCGAGA+GGG | 0.457750 | 6_2:+58079864 | Msa0921180:CDS |
| TTCAAAGATGGCTGATGAAA+CGG | 0.458307 | 6_2:+58079597 | None:intergenic |
| TTACAGACCATAAAATTGCT+TGG | 0.459459 | 6_2:-58085863 | None:intergenic |
| ATGGCTATTAGTGTAGCATT+TGG | 0.461888 | 6_2:-58079688 | None:intergenic |
| AACCCTAAACTCTCTTCAAA+AGG | 0.467354 | 6_2:-58086086 | None:intergenic |
| ACAACTGACCATGTCTTCTC+AGG | 0.472529 | 6_2:-58086275 | None:intergenic |
| GATGAAACGGTTGTGCGGTT+TGG | 0.487330 | 6_2:+58079610 | Msa0921180:CDS |
| GCATATGTTGTTGGAGAAGC+CGG | 0.487369 | 6_2:+58079891 | Msa0921180:CDS |
| ATATGCAAGGCCGTCGGAAG+AGG | 0.487744 | 6_2:-58079835 | None:intergenic |
| AAGGAGTTTGCTGATTTGGT+TGG | 0.495544 | 6_2:+58086227 | Msa0921180:CDS |
| CCCTAGAACTGCTAAAATGA+AGG | 0.500926 | 6_2:+58080005 | Msa0921180:CDS |
| CCGTAAACCCTAACCGCCTC+CGG | 0.508968 | 6_2:-58079763 | None:intergenic |
| TGTTACATCAAAGTTTACAT+AGG | 0.513604 | 6_2:-58086018 | None:intergenic |
| CGCATGAAACCAGATTTAGA+TGG | 0.513892 | 6_2:+58085804 | Msa0921180:intron |
| TAGAAAGACTCAACTTGTGT+TGG | 0.515492 | 6_2:+58086301 | Msa0921180:CDS |
| ACTTGTGTTGGATGCTGTGA+AGG | 0.517058 | 6_2:+58086313 | Msa0921180:CDS |
| CGACGGCCTTGCATATGATG+TGG | 0.519545 | 6_2:+58079842 | Msa0921180:CDS |
| CAGTTGCTTTCTCCAAAGAA+CGG | 0.523848 | 6_2:-58079717 | None:intergenic |
| TCCGACACATTCATTGCGAC+CGG | 0.525549 | 6_2:-58079910 | None:intergenic |
| GTGCTCTTGGTGACATAGGT+TGG | 0.537363 | 6_2:+58085832 | Msa0921180:CDS |
| CTCCAAAGAACGGCTTCCAA+TGG | 0.540003 | 6_2:-58079707 | None:intergenic |
| CTATCAAGGCCGCCGAGAGG+GGG | 0.543151 | 6_2:+58079866 | Msa0921180:CDS |
| TGAATGTGTCGGAGCTTGAT+CGG | 0.557128 | 6_2:+58079920 | Msa0921180:CDS |
| AATGCTACACTAATAGCCAT+TGG | 0.561382 | 6_2:+58079691 | Msa0921180:CDS |
| GACGGCCTTGCATATGATGT+GGG | 0.577653 | 6_2:+58079843 | Msa0921180:CDS |
| ACAAGGTAGGTGGTGTCCTA+GGG | 0.579829 | 6_2:+58086154 | Msa0921180:CDS |
| ACAACATGTTCATTTGCCCT+AGG | 0.581428 | 6_2:-58086170 | None:intergenic |
| AATGGAGTGCAGTTTATGGA+TGG | 0.581921 | 6_2:+58079964 | Msa0921180:CDS |
| TCGGATTCTTGAAGCTTGTG+AGG | 0.587102 | 6_2:+58079939 | Msa0921180:CDS |
| TATGCAAGGCCGTCGGAAGA+GGG | 0.590936 | 6_2:-58079834 | None:intergenic |
| AAATGAAACCTGAGAAGACA+TGG | 0.592269 | 6_2:+58086267 | Msa0921180:CDS |
| CATAGGTTAAGAAAGAGCAA+TGG | 0.600728 | 6_2:-58086001 | None:intergenic |
| GACAATGTAATCATATCTTG+TGG | 0.608516 | 6_2:+58085939 | Msa0921180:CDS |
| GGCGGAGCAAGGGTTGCCGG+AGG | 0.618738 | 6_2:+58079747 | Msa0921180:CDS |
| GATAGCCCACATCATATGCA+AGG | 0.623480 | 6_2:-58079848 | None:intergenic |
| ATGCAAAGATTGAACAAGGT+AGG | 0.623818 | 6_2:+58086141 | Msa0921180:CDS |
| GATTATGCAAAGATTGAACA+AGG | 0.629151 | 6_2:+58086137 | Msa0921180:CDS |
| GCCGGTCGCAATGAATGTGT+CGG | 0.630254 | 6_2:+58079909 | Msa0921180:CDS |
| GGGCTATCAAGGCCGCCGAG+AGG | 0.631420 | 6_2:+58079863 | Msa0921180:CDS |
| TAAGAAAGAGCAATGGAATG+TGG | 0.643558 | 6_2:-58085994 | None:intergenic |
| CACATCATATGCAAGGCCGT+CGG | 0.646189 | 6_2:-58079841 | None:intergenic |
| GTGAAGGAGTCTATTCAAAG+AGG | 0.649981 | 6_2:+58086329 | Msa0921180:CDS |
| CAAAGATTGAACAAGGTAGG+TGG | 0.653085 | 6_2:+58086144 | Msa0921180:CDS |
| TAGAACTGCTAAAATGAAGG+AGG | 0.654511 | 6_2:+58080008 | Msa0921180:CDS |
| GGTCTACATCCCTCTTCCGA+CGG | 0.671950 | 6_2:+58079825 | Msa0921180:CDS |
| TGGCTGATGAAACGGTTGTG+CGG | 0.695663 | 6_2:+58079605 | Msa0921180:CDS |
| GGAAGATAATGAGGTAGACG+CGG | 0.696415 | 6_2:+58079804 | Msa0921180:intron |
| AGTTTATGGATGGTTCAATG+TGG | 0.704562 | 6_2:+58079974 | Msa0921180:CDS |
| TAGGGTTTACGGGAGCTACG+AGG | 0.754292 | 6_2:+58079774 | Msa0921180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAGAAAAATTTTATTTG+GGG | + | chr6_2:58080175-58080194 | Msa0921180:intron | 10.0% |
| !!! | AAATCATTTATTTTAACAAA+TGG | - | chr6_2:58080213-58080232 | None:intergenic | 10.0% |
| !!! | ATAATTTTTTTTTTCTTGAT+TGG | - | chr6_2:58080310-58080329 | None:intergenic | 10.0% |
| !!! | TTTTATAAATAGAATTAAAG+AGG | + | chr6_2:58081450-58081469 | Msa0921180:intron | 10.0% |
| !! | TTTATAAATAGAATTAAAGA+GGG | + | chr6_2:58081451-58081470 | Msa0921180:intron | 10.0% |
| !!! | GACATTTAATATATATTTTA+TGG | - | chr6_2:58082063-58082082 | None:intergenic | 10.0% |
| !! | TATTATCATTAAACAAATTT+AGG | - | chr6_2:58082630-58082649 | None:intergenic | 10.0% |
| !!! | GAAAAATAATTAATTTTTGT+AGG | + | chr6_2:58082905-58082924 | Msa0921180:intron | 10.0% |
| !!! | ATTTTTTAAACAATATCTTA+AGG | - | chr6_2:58083511-58083530 | None:intergenic | 10.0% |
| !!! | ATATATGTTTCTATATAATA+TGG | + | chr6_2:58084080-58084099 | Msa0921180:intron | 10.0% |
| !!! | ATTTATTTTAACAAATGGAA+AGG | - | chr6_2:58080208-58080227 | None:intergenic | 15.0% |
| !! | AATGATTTATTTGAATACAA+AGG | + | chr6_2:58080225-58080244 | Msa0921180:intron | 15.0% |
| !! | ATGATTTATTTGAATACAAA+GGG | + | chr6_2:58080226-58080245 | Msa0921180:intron | 15.0% |
| !!! | AACCAATTAAATTTGTTATT+TGG | - | chr6_2:58080501-58080520 | None:intergenic | 15.0% |
| !! | CTTAATAATATTCCTTAAAT+AGG | - | chr6_2:58081006-58081025 | None:intergenic | 15.0% |
| !!! | TTTGGGTTTAATTAATTTTA+AGG | + | chr6_2:58081088-58081107 | Msa0921180:intron | 15.0% |
| !! | ATTAAAAAAGGTTTAAATTG+TGG | + | chr6_2:58081129-58081148 | Msa0921180:intron | 15.0% |
| !!! | TCAAAAAAAAAAAGTTCTTT+TGG | - | chr6_2:58081632-58081651 | None:intergenic | 15.0% |
| !!! | TGAAACATTTTGTAATTTTT+TGG | + | chr6_2:58081804-58081823 | Msa0921180:intron | 15.0% |
| !!! | TTTTGTAATTTTTTGGATAA+TGG | + | chr6_2:58081811-58081830 | Msa0921180:intron | 15.0% |
| !! | TAATTGAATAATAAACAAGT+TGG | + | chr6_2:58081899-58081918 | Msa0921180:intron | 15.0% |
| !!! | AAATTGTGTATTTGTAATTT+TGG | - | chr6_2:58082752-58082771 | None:intergenic | 15.0% |
| !!! | TAAGATTTTATTTTCACTTT+TGG | + | chr6_2:58082773-58082792 | Msa0921180:intron | 15.0% |
| !!! | ATTTATTTGATATTTTTTGG+TGG | - | chr6_2:58082838-58082857 | None:intergenic | 15.0% |
| !! | TAGTATAATAAAAATGTTGT+CGG | - | chr6_2:58083165-58083184 | None:intergenic | 15.0% |
| !! | TTCTATTCTCAATTTATTTA+GGG | + | chr6_2:58083864-58083883 | Msa0921180:intron | 15.0% |
| !! | TTTAGTAGTAGAATAAATAT+TGG | + | chr6_2:58084006-58084025 | Msa0921180:intron | 15.0% |
| !!! | ATCTTCTTTTTTTTTTTTGA+AGG | - | chr6_2:58084161-58084180 | None:intergenic | 15.0% |
| !!! | ATTTATATGTTTTATCTCTT+TGG | + | chr6_2:58084375-58084394 | Msa0921180:intron | 15.0% |
| !! | TACATATTAAAATAAGAAAG+AGG | - | chr6_2:58084552-58084571 | None:intergenic | 15.0% |
| !!! | ATAATTTTTTTTGTTGTTGA+AGG | - | chr6_2:58084850-58084869 | None:intergenic | 15.0% |
| !! | AGAAACAAAAATACTAAAAT+TGG | - | chr6_2:58085678-58085697 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCTTGATTGGTT+GGG | - | chr6_2:58080305-58080324 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCTTGATTGGT+TGG | - | chr6_2:58080306-58080325 | None:intergenic | 20.0% |
| !! | AGCCAAATAACAAATTTAAT+TGG | + | chr6_2:58080496-58080515 | Msa0921180:intron | 20.0% |
| !! | ATCAAGAATTTATCAAGAAA+AGG | - | chr6_2:58080528-58080547 | None:intergenic | 20.0% |
| !! | CTATTAAATCATCATAAATG+AGG | - | chr6_2:58080671-58080690 | None:intergenic | 20.0% |
| !!! | TTTTTCATGGCAAATAAATA+AGG | - | chr6_2:58080747-58080766 | None:intergenic | 20.0% |
| !! | TATTTGCCATGAAAAAATAA+AGG | + | chr6_2:58080751-58080770 | Msa0921180:intron | 20.0% |
| !! | ATTTGCCATGAAAAAATAAA+GGG | + | chr6_2:58080752-58080771 | Msa0921180:intron | 20.0% |
| !!! | TTTTACCCTTTATTTTTTCA+TGG | - | chr6_2:58080760-58080779 | None:intergenic | 20.0% |
| !! | TAGTTAAACAAAAGTTAGAT+TGG | + | chr6_2:58081064-58081083 | Msa0921180:intron | 20.0% |
| !! | ACTGTGCTTATTATTAAAAA+AGG | + | chr6_2:58081117-58081136 | Msa0921180:intron | 20.0% |
| !! | TATCACTCAAAGAAAAAAAA+AGG | - | chr6_2:58082085-58082104 | None:intergenic | 20.0% |
| !!! | TTTTTTATTTTGTGCTCTTA+GGG | + | chr6_2:58082796-58082815 | Msa0921180:intron | 20.0% |
| !! | AACATCTTAAAAAAAAGCTA+AGG | - | chr6_2:58082945-58082964 | None:intergenic | 20.0% |
| !! | AGTATAATAAAAATGTTGTC+GGG | - | chr6_2:58083164-58083183 | None:intergenic | 20.0% |
| !!! | TAATTTATGTAGCTTTTTCT+TGG | + | chr6_2:58083203-58083222 | Msa0921180:intron | 20.0% |
| !! | TTCGTCTTAAATAATTAGTA+CGG | + | chr6_2:58083358-58083377 | Msa0921180:intron | 20.0% |
| !! | TTCTTGAAAAAATTGTGAAT+TGG | + | chr6_2:58083530-58083549 | Msa0921180:intron | 20.0% |
| !! | AAAAAATTGTGAATTGGAAA+TGG | + | chr6_2:58083536-58083555 | Msa0921180:intron | 20.0% |
| !! | CTAAATAAATTGAGAATAGA+AGG | - | chr6_2:58083865-58083884 | None:intergenic | 20.0% |
| !! | CTTCTATTCTCAATTTATTT+AGG | + | chr6_2:58083863-58083882 | Msa0921180:intron | 20.0% |
| !! | TCTATTCTCAATTTATTTAG+GGG | + | chr6_2:58083865-58083884 | Msa0921180:intron | 20.0% |
| !!! | ACTTTTTTTTGAGGTAATTT+TGG | + | chr6_2:58083952-58083971 | Msa0921180:intron | 20.0% |
| !! | TTCTACTACTAAATTAAGTT+TGG | - | chr6_2:58083999-58084018 | None:intergenic | 20.0% |
| !! | AACAAATTATTTGCTTAAGT+CGG | + | chr6_2:58084289-58084308 | Msa0921180:intron | 20.0% |
| !! | AGAGATAAAACATATAAATC+AGG | - | chr6_2:58084374-58084393 | None:intergenic | 20.0% |
| !!! | TCATGTTCGTTTTTTTTTTA+AGG | + | chr6_2:58084721-58084740 | Msa0921180:intron | 20.0% |
| !!! | CATGTTCGTTTTTTTTTTAA+GGG | + | chr6_2:58084722-58084741 | Msa0921180:intron | 20.0% |
| !!! | TTTATGATCTTTTATCAAGT+TGG | - | chr6_2:58085001-58085020 | None:intergenic | 20.0% |
| !! | CTTTACTAATAATTTACAAG+AGG | + | chr6_2:58085132-58085151 | Msa0921180:intron | 20.0% |
| !!! | AATTGGTTGGTTTAATATTT+AGG | - | chr6_2:58085245-58085264 | None:intergenic | 20.0% |
| !! | AATATTAAACCAACCAATTT+AGG | + | chr6_2:58085246-58085265 | Msa0921180:intron | 20.0% |
| !! | TTTAACGATAGAATTAAACA+CGG | - | chr6_2:58085436-58085455 | None:intergenic | 20.0% |
| !!! | AAACTTTGATGTAACAATTT+TGG | + | chr6_2:58086025-58086044 | Msa0921180:CDS | 20.0% |
| !!! | AACTTTGATGTAACAATTTT+GGG | + | chr6_2:58086026-58086045 | Msa0921180:CDS | 20.0% |
| ! | GAAAGTAGAGAATAATTTGA+AGG | - | chr6_2:58080984-58081003 | None:intergenic | 25.0% |
| ! | ATTCTCTACTTTCCTATTTA+AGG | + | chr6_2:58080991-58081010 | Msa0921180:intron | 25.0% |
| !!! | AACAAAAGTTAGATTGGTTT+TGG | + | chr6_2:58081070-58081089 | Msa0921180:intron | 25.0% |
| !!! | ACAAAAGTTAGATTGGTTTT+GGG | + | chr6_2:58081071-58081090 | Msa0921180:intron | 25.0% |
| ! | GTTAATATATAGGATCTCTA+AGG | + | chr6_2:58081189-58081208 | Msa0921180:intron | 25.0% |
| ! | AGATTGAATAAGAGAGATTA+AGG | + | chr6_2:58081233-58081252 | Msa0921180:intron | 25.0% |
| ! | GATTGAATAAGAGAGATTAA+GGG | + | chr6_2:58081234-58081253 | Msa0921180:intron | 25.0% |
| !!! | CCTATCACATCTTTTTTTTT+CGG | + | chr6_2:58081343-58081362 | Msa0921180:intron | 25.0% |
| ! | AATCGCACAAAGATTAATAT+TGG | + | chr6_2:58081935-58081954 | Msa0921180:intron | 25.0% |
| !! | ATAAACGTTCTTTGAAGATT+GGG | + | chr6_2:58082565-58082584 | Msa0921180:intron | 25.0% |
| ! | TAAACAAATTTAGGTGAGTA+GGG | - | chr6_2:58082621-58082640 | None:intergenic | 25.0% |
| ! | TTAAACAAATTTAGGTGAGT+AGG | - | chr6_2:58082622-58082641 | None:intergenic | 25.0% |
| ! | TTATGTTAACTTATGCTCAT+AGG | + | chr6_2:58082655-58082674 | Msa0921180:intron | 25.0% |
| ! | TATGTTAACTTATGCTCATA+GGG | + | chr6_2:58082656-58082675 | Msa0921180:intron | 25.0% |
| !!! | GTTTTTTATTTTGTGCTCTT+AGG | + | chr6_2:58082795-58082814 | Msa0921180:intron | 25.0% |
| ! | AATACTTTACTAGACATGAT+AGG | + | chr6_2:58083099-58083118 | Msa0921180:intron | 25.0% |
| ! | TAAGAATATGTGATGAGAAA+AGG | + | chr6_2:58083256-58083275 | Msa0921180:intron | 25.0% |
| ! | AAGAATATGTGATGAGAAAA+GGG | + | chr6_2:58083257-58083276 | Msa0921180:intron | 25.0% |
| ! | AAATCCGAAAGTTAAAAGAT+AGG | + | chr6_2:58083382-58083401 | Msa0921180:intron | 25.0% |
| ! | AAATTGCAAAACAGAGAAAT+CGG | + | chr6_2:58083698-58083717 | Msa0921180:intron | 25.0% |
| !!! | TAGTGAGATACTTTTTTTTG+AGG | + | chr6_2:58083943-58083962 | Msa0921180:intron | 25.0% |
| ! | TTACGTGGATAATGATAATA+TGG | + | chr6_2:58084044-58084063 | Msa0921180:intron | 25.0% |
| ! | AGAAGATATGATATGAAGTT+TGG | + | chr6_2:58084174-58084193 | Msa0921180:intron | 25.0% |
| ! | ATGAAATATATGTGAGCAAT+TGG | - | chr6_2:58084705-58084724 | None:intergenic | 25.0% |
| !!! | TTTTAAGGGATATTTCATGT+TGG | + | chr6_2:58084736-58084755 | Msa0921180:intron | 25.0% |
| ! | ATACCAACTATAACATTCTA+CGG | + | chr6_2:58084876-58084895 | Msa0921180:intron | 25.0% |
| !!! | TCCAACTTGATTTTTTTGAA+GGG | + | chr6_2:58084970-58084989 | Msa0921180:intron | 25.0% |
| ! | ATTGCTTGATTACTCATTAT+CGG | + | chr6_2:58085043-58085062 | Msa0921180:intron | 25.0% |
| ! | TAGTAATGATGAATTGTTGT+TGG | + | chr6_2:58085205-58085224 | Msa0921180:intron | 25.0% |
| !! | GTTGGTTTAATATTTAGGAA+GGG | - | chr6_2:58085240-58085259 | None:intergenic | 25.0% |
| !!! | TCGCTATTTCAACTTTTTTA+TGG | - | chr6_2:58085578-58085597 | None:intergenic | 25.0% |
| ! | TACATTGTCTTCATTGAATA+TGG | - | chr6_2:58085928-58085947 | None:intergenic | 25.0% |
| ! | TGTTACATCAAAGTTTACAT+AGG | - | chr6_2:58086021-58086040 | None:intergenic | 25.0% |
| !!! | TAACAATTTTGGGAACAAAA+GGG | + | chr6_2:58086036-58086055 | Msa0921180:CDS | 25.0% |
| !!! | ATTTGGTTGGTAAAATTAAG+AGG | + | chr6_2:58086240-58086259 | Msa0921180:CDS | 25.0% |
| ATTGGTTGGGAAGATTTATT+TGG | - | chr6_2:58080292-58080311 | None:intergenic | 30.0% | |
| ! | ATTTTCAAAGTTCAACACAC+TGG | - | chr6_2:58080376-58080395 | None:intergenic | 30.0% |
| ! | TGTTATTTGGCTGAAATCAA+GGG | - | chr6_2:58080488-58080507 | None:intergenic | 30.0% |
| !! | TTGTTATTTGGCTGAAATCA+AGG | - | chr6_2:58080489-58080508 | None:intergenic | 30.0% |
| !!! | AATGCAACTTTTTGAGTCAA+AGG | - | chr6_2:58080628-58080647 | None:intergenic | 30.0% |
| !! | TTCTGGTTGGTTTATTTGTA+GGG | - | chr6_2:58080938-58080957 | None:intergenic | 30.0% |
| AGTAGAGAATAATTTGAAGG+TGG | - | chr6_2:58080981-58081000 | None:intergenic | 30.0% | |
| ! | TAAGCAGGTAGTATATTTTG+TGG | + | chr6_2:58081277-58081296 | Msa0921180:intron | 30.0% |
| ! | TAGTATATTTTGTGGAGAGT+TGG | + | chr6_2:58081285-58081304 | Msa0921180:intron | 30.0% |
| CCGAAAAAAAAAGATGTGAT+AGG | - | chr6_2:58081346-58081365 | None:intergenic | 30.0% | |
| AGACAGCTACATATAATATG+TGG | + | chr6_2:58081747-58081766 | Msa0921180:intron | 30.0% | |
| !!! | TAGTCCATTTTTTCCTGAAA+AGG | - | chr6_2:58081982-58082001 | None:intergenic | 30.0% |
| GAAAAAAAGGAAGAAGTAAG+TGG | + | chr6_2:58082207-58082226 | Msa0921180:intron | 30.0% | |
| TGGAAGAAATAGAGAACATT+GGG | + | chr6_2:58082227-58082246 | Msa0921180:intron | 30.0% | |
| TATAAAACTCTCCTCATTTG+AGG | + | chr6_2:58082286-58082305 | Msa0921180:intron | 30.0% | |
| ATAAAACTCTCCTCATTTGA+GGG | + | chr6_2:58082287-58082306 | Msa0921180:intron | 30.0% | |
| AGGGAACTCAAAAATTGTAT+TGG | + | chr6_2:58082306-58082325 | Msa0921180:intron | 30.0% | |
| GAACTCAAAAATTGTATTGG+AGG | + | chr6_2:58082309-58082328 | Msa0921180:intron | 30.0% | |
| TCAAAAATTGTATTGGAGGA+GGG | + | chr6_2:58082313-58082332 | Msa0921180:intron | 30.0% | |
| ! | GATAAACGTTCTTTGAAGAT+TGG | + | chr6_2:58082564-58082583 | Msa0921180:intron | 30.0% |
| ! | TAAACGTTCTTTGAAGATTG+GGG | + | chr6_2:58082566-58082585 | Msa0921180:intron | 30.0% |
| ! | AAAGTGTAGATACCCAATTT+TGG | + | chr6_2:58083009-58083028 | Msa0921180:intron | 30.0% |
| ! | AAGTGTAGATACCCAATTTT+GGG | + | chr6_2:58083010-58083029 | Msa0921180:intron | 30.0% |
| CAAACATTTGACATCAAAAG+AGG | - | chr6_2:58083077-58083096 | None:intergenic | 30.0% | |
| ! | CTCTTTTGATGTCAAATGTT+TGG | + | chr6_2:58083075-58083094 | Msa0921180:intron | 30.0% |
| !! | TTTTTCTTGGTAACTAAGTC+AGG | + | chr6_2:58083216-58083235 | Msa0921180:intron | 30.0% |
| !!! | GCAACCTATCTTTTAACTTT+CGG | - | chr6_2:58083389-58083408 | None:intergenic | 30.0% |
| TTGCATTCTTATCGATCTAT+GGG | + | chr6_2:58083405-58083424 | Msa0921180:intron | 30.0% | |
| !! | TAGAATGATTGGTTCGTATA+TGG | - | chr6_2:58083480-58083499 | None:intergenic | 30.0% |
| AGTTCTTTAAACAATGCATG+AGG | + | chr6_2:58083618-58083637 | Msa0921180:intron | 30.0% | |
| GTTCTTTAAACAATGCATGA+GGG | + | chr6_2:58083619-58083638 | Msa0921180:intron | 30.0% | |
| ATTCTCAATTTATTTAGGGG+AGG | + | chr6_2:58083868-58083887 | Msa0921180:intron | 30.0% | |
| ! | TGAAACTTTGTTTCATTACG+TGG | + | chr6_2:58084029-58084048 | Msa0921180:intron | 30.0% |
| TGGAGAACACAAAATAGTTA+CGG | - | chr6_2:58084205-58084224 | None:intergenic | 30.0% | |
| ! | CTTTGGTTTAGTTCATTAGT+TGG | + | chr6_2:58084392-58084411 | Msa0921180:intron | 30.0% |
| GACTCATACCAAAAACAAAA+TGG | - | chr6_2:58084424-58084443 | None:intergenic | 30.0% | |
| !!! | TGTTTTTGGTATGAGTCATT+AGG | + | chr6_2:58084427-58084446 | Msa0921180:intron | 30.0% |
| !!! | GAGGGATTTTGTTTTTTTGT+TGG | + | chr6_2:58084452-58084471 | Msa0921180:intron | 30.0% |
| ! | TTTTGTTGGTATTTGTGTGT+TGG | + | chr6_2:58084466-58084485 | Msa0921180:intron | 30.0% |
| ! | TATTTCATGTTGGTTGTAGA+AGG | + | chr6_2:58084746-58084765 | Msa0921180:intron | 30.0% |
| ! | ATTTCATGTTGGTTGTAGAA+GGG | + | chr6_2:58084747-58084766 | Msa0921180:intron | 30.0% |
| AGTGTCTTAGAATGTTAACA+CGG | + | chr6_2:58084947-58084966 | Msa0921180:intron | 30.0% | |
| !!! | GTCCAACTTGATTTTTTTGA+AGG | + | chr6_2:58084969-58084988 | Msa0921180:intron | 30.0% |
| TCCCTTCAAAAAAATCAAGT+TGG | - | chr6_2:58084974-58084993 | None:intergenic | 30.0% | |
| !!! | ACTTGATTTTTTTGAAGGGA+CGG | + | chr6_2:58084974-58084993 | Msa0921180:intron | 30.0% |
| TTGTTCTTGAAAGACAACAA+TGG | + | chr6_2:58085181-58085200 | Msa0921180:intron | 30.0% | |
| ! | ATGAATTGTTGTTGGTAAAC+AGG | + | chr6_2:58085213-58085232 | Msa0921180:intron | 30.0% |
| !! | GGTTGGTTTAATATTTAGGA+AGG | - | chr6_2:58085241-58085260 | None:intergenic | 30.0% |
| !! | AATGATTTTTGTTTCACGAC+TGG | + | chr6_2:58085363-58085382 | Msa0921180:intron | 30.0% |
| AATGTTAGTGATGCATAACT+TGG | + | chr6_2:58085454-58085473 | Msa0921180:intron | 30.0% | |
| ATTGTTAGTGATGCATAACT+TGG | + | chr6_2:58085649-58085668 | Msa0921180:intron | 30.0% | |
| TTACAGACCATAAAATTGCT+TGG | - | chr6_2:58085866-58085885 | None:intergenic | 30.0% | |
| ! | TCTTCATTGAATATGGCTTT+TGG | - | chr6_2:58085921-58085940 | None:intergenic | 30.0% |
| GACAATGTAATCATATCTTG+TGG | + | chr6_2:58085939-58085958 | Msa0921180:CDS | 30.0% | |
| TTGTGGTTCTTCATTACATT+GGG | + | chr6_2:58085956-58085975 | Msa0921180:CDS | 30.0% | |
| !! | GTAACAATTTTGGGAACAAA+AGG | + | chr6_2:58086035-58086054 | Msa0921180:CDS | 30.0% |
| !! | TTCCTTTTGAAGAGAGTTTA+GGG | + | chr6_2:58086084-58086103 | Msa0921180:CDS | 30.0% |
| !! | TTTAGGGTTTGGAACATTTT+CGG | + | chr6_2:58086100-58086119 | Msa0921180:CDS | 30.0% |
| GATTATGCAAAGATTGAACA+AGG | + | chr6_2:58086137-58086156 | Msa0921180:CDS | 30.0% | |
| ! | CAAAGTTTTCTCAAGATGTT+TGG | + | chr6_2:58086198-58086217 | Msa0921180:CDS | 30.0% |
| TCAAGATGTTTGGATGATTA+AGG | + | chr6_2:58086208-58086227 | Msa0921180:CDS | 30.0% | |
| ATGGCTATTAGTGTAGCATT+TGG | - | chr6_2:58079691-58079710 | None:intergenic | 35.0% | |
| AATGCTACACTAATAGCCAT+TGG | + | chr6_2:58079691-58079710 | Msa0921180:CDS | 35.0% | |
| AGTTTATGGATGGTTCAATG+TGG | + | chr6_2:58079974-58079993 | Msa0921180:CDS | 35.0% | |
| !! | CCTTCATTTTAGCAGTTCTA+GGG | - | chr6_2:58080008-58080027 | None:intergenic | 35.0% |
| !! | TCCTTCATTTTAGCAGTTCT+AGG | - | chr6_2:58080009-58080028 | None:intergenic | 35.0% |
| TAGAACTGCTAAAATGAAGG+AGG | + | chr6_2:58080008-58080027 | Msa0921180:CDS | 35.0% | |
| !! | AACGTTTTGGTCAACTCAAA+TGG | + | chr6_2:58080046-58080065 | Msa0921180:intron | 35.0% |
| !! | ACGTTTTGGTCAACTCAAAT+GGG | + | chr6_2:58080047-58080066 | Msa0921180:intron | 35.0% |
| TAGCAAATACACTGTCTTCA+AGG | - | chr6_2:58080435-58080454 | None:intergenic | 35.0% | |
| ! | GAGGTAATGGTGTGTAATTA+AGG | - | chr6_2:58080466-58080485 | None:intergenic | 35.0% |
| ACGTTTGACGTAAAAATGTG+AGG | - | chr6_2:58080722-58080741 | None:intergenic | 35.0% | |
| !! | GTTCTGGTTGGTTTATTTGT+AGG | - | chr6_2:58080939-58080958 | None:intergenic | 35.0% |
| AGAGAATAATTTGAAGGTGG+TGG | - | chr6_2:58080978-58080997 | None:intergenic | 35.0% | |
| GAGATTAAGGGTTCAACAAT+TGG | + | chr6_2:58081246-58081265 | Msa0921180:intron | 35.0% | |
| ! | TATAAGCTTTGTGAGCTTCT+TGG | + | chr6_2:58081541-58081560 | Msa0921180:intron | 35.0% |
| AACCAAAACAACTTGAGAAG+AGG | + | chr6_2:58081659-58081678 | Msa0921180:intron | 35.0% | |
| !! | TTCCTCTTCTCAAGTTGTTT+TGG | - | chr6_2:58081664-58081683 | None:intergenic | 35.0% |
| ! | TGTATGAGCTGGATTTGTTT+GGG | - | chr6_2:58081719-58081738 | None:intergenic | 35.0% |
| TTCCTATACACATGCATGAA+AGG | + | chr6_2:58081836-58081855 | Msa0921180:intron | 35.0% | |
| TTCCTTTCATGCATGTGTAT+AGG | - | chr6_2:58081841-58081860 | None:intergenic | 35.0% | |
| ! | TCAATATCTCTCTCCTTTTC+AGG | + | chr6_2:58081966-58081985 | Msa0921180:intron | 35.0% |
| !! | CTCTCCTTTTCAGGAAAAAA+TGG | + | chr6_2:58081975-58081994 | Msa0921180:intron | 35.0% |
| GTGGAAGAAATAGAGAACAT+TGG | + | chr6_2:58082226-58082245 | Msa0921180:intron | 35.0% | |
| AAGAAATAGAGAACATTGGG+AGG | + | chr6_2:58082230-58082249 | Msa0921180:intron | 35.0% | |
| !!! | TTTTTGAGTTCCCTCAAATG+AGG | - | chr6_2:58082300-58082319 | None:intergenic | 35.0% |
| CTCAAAAATTGTATTGGAGG+AGG | + | chr6_2:58082312-58082331 | Msa0921180:intron | 35.0% | |
| ! | AGTGTAGATACCCAATTTTG+GGG | + | chr6_2:58083011-58083030 | Msa0921180:intron | 35.0% |
| ! | GGAGCTTTGATCAAAAGAAA+TGG | + | chr6_2:58083032-58083051 | Msa0921180:intron | 35.0% |
| ATGGATAAATCCTAGTGAGT+AGG | + | chr6_2:58083051-58083070 | Msa0921180:intron | 35.0% | |
| AATATGTGATGAGAAAAGGG+TGG | + | chr6_2:58083260-58083279 | Msa0921180:intron | 35.0% | |
| GTTGCATTCTTATCGATCTA+TGG | + | chr6_2:58083404-58083423 | Msa0921180:intron | 35.0% | |
| AGGCACTTTGTTAGAATGAT+TGG | - | chr6_2:58083491-58083510 | None:intergenic | 35.0% | |
| AATCGGTAGTAACTAGATTC+AGG | + | chr6_2:58083715-58083734 | Msa0921180:intron | 35.0% | |
| ! | TATTGTTGTTGTGGTCAATG+AGG | + | chr6_2:58083902-58083921 | Msa0921180:intron | 35.0% |
| GGAGAACACAAAATAGTTAC+GGG | - | chr6_2:58084204-58084223 | None:intergenic | 35.0% | |
| AGGAATTAATCCAGAAGTTC+CGG | + | chr6_2:58084243-58084262 | Msa0921180:intron | 35.0% | |
| !! | TTGTTTGGATGTTTTTGAGC+AGG | + | chr6_2:58084332-58084351 | Msa0921180:intron | 35.0% |
| !! | TGTTTGGATGTTTTTGAGCA+GGG | + | chr6_2:58084333-58084352 | Msa0921180:intron | 35.0% |
| !! | ATGTTTTTGAGCAGGGTTTT+TGG | + | chr6_2:58084340-58084359 | Msa0921180:intron | 35.0% |
| !! | TGTTTTTGAGCAGGGTTTTT+GGG | + | chr6_2:58084341-58084360 | Msa0921180:intron | 35.0% |
| ! | GTTTAGTTCATTAGTTGGCT+TGG | + | chr6_2:58084397-58084416 | Msa0921180:intron | 35.0% |
| ! | TTTTGGTATGAGTCATTAGG+AGG | + | chr6_2:58084430-58084449 | Msa0921180:intron | 35.0% |
| !! | ATTTGTGTGTTGGTTTCCTT+TGG | + | chr6_2:58084476-58084495 | Msa0921180:intron | 35.0% |
| AATGTATAACGTGTGTTCGA+AGG | - | chr6_2:58084524-58084543 | None:intergenic | 35.0% | |
| TAGAGACTAGTGTGAATCAA+AGG | - | chr6_2:58084793-58084812 | None:intergenic | 35.0% | |
| AAGCCGTAGAATGTTATAGT+TGG | - | chr6_2:58084882-58084901 | None:intergenic | 35.0% | |
| TAGCGACGATAATTTAGAGA+TGG | + | chr6_2:58085399-58085418 | Msa0921180:intron | 35.0% | |
| AAACCAGATTTAGATGGTCT+TGG | + | chr6_2:58085810-58085829 | Msa0921180:intron | 35.0% | |
| ! | ACAGCATCCAAGCAATTTTA+TGG | + | chr6_2:58085856-58085875 | Msa0921180:CDS | 35.0% |
| ! | GGAAATGCAAGAACTGATTT+CGG | - | chr6_2:58085900-58085919 | None:intergenic | 35.0% |
| CTTGTGGTTCTTCATTACAT+TGG | + | chr6_2:58085955-58085974 | Msa0921180:CDS | 35.0% | |
| TCTTCATTACATTGGGAAGA+TGG | + | chr6_2:58085963-58085982 | Msa0921180:CDS | 35.0% | |
| TAAGAAAGAGCAATGGAATG+TGG | - | chr6_2:58085997-58086016 | None:intergenic | 35.0% | |
| CATAGGTTAAGAAAGAGCAA+TGG | - | chr6_2:58086004-58086023 | None:intergenic | 35.0% | |
| !! | CTTCCTTTTGAAGAGAGTTT+AGG | + | chr6_2:58086083-58086102 | Msa0921180:CDS | 35.0% |
| AACCCTAAACTCTCTTCAAA+AGG | - | chr6_2:58086089-58086108 | None:intergenic | 35.0% | |
| ! | TTTGAAGAGAGTTTAGGGTT+TGG | + | chr6_2:58086089-58086108 | Msa0921180:CDS | 35.0% |
| ATGCAAAGATTGAACAAGGT+AGG | + | chr6_2:58086141-58086160 | Msa0921180:CDS | 35.0% | |
| !! | GATTAAGGAGTTTGCTGATT+TGG | + | chr6_2:58086223-58086242 | Msa0921180:CDS | 35.0% |
| !! | GGTTGGTAAAATTAAGAGGT+TGG | + | chr6_2:58086244-58086263 | Msa0921180:CDS | 35.0% |
| AAATGAAACCTGAGAAGACA+TGG | + | chr6_2:58086267-58086286 | Msa0921180:CDS | 35.0% | |
| TAGAAAGACTCAACTTGTGT+TGG | + | chr6_2:58086301-58086320 | Msa0921180:CDS | 35.0% | |
| !! | AGCATTTGGTGCTTTGCTTA+TGG | - | chr6_2:58079677-58079696 | None:intergenic | 40.0% |
| ! | CAGTTGCTTTCTCCAAAGAA+CGG | - | chr6_2:58079720-58079739 | None:intergenic | 40.0% |
| !!! | GGCTGTTTTGGAAGATAATG+AGG | + | chr6_2:58079795-58079814 | Msa0921180:intron | 40.0% |
| AATGGAGTGCAGTTTATGGA+TGG | + | chr6_2:58079964-58079983 | Msa0921180:CDS | 40.0% | |
| CCCTAGAACTGCTAAAATGA+AGG | + | chr6_2:58080005-58080024 | Msa0921180:CDS | 40.0% | |
| CAAATACACTGTCTTCAAGG+TGG | - | chr6_2:58080432-58080451 | None:intergenic | 40.0% | |
| TATTTGGCTGAAATCAAGGG+AGG | - | chr6_2:58080485-58080504 | None:intergenic | 40.0% | |
| CATCTACTAGTCAAGAGTCT+TGG | + | chr6_2:58080896-58080915 | Msa0921180:intron | 40.0% | |
| ! | GTTGGTTTATTTGTAGGGAG+GGG | - | chr6_2:58080933-58080952 | None:intergenic | 40.0% |
| !! | GGTTGGTTTATTTGTAGGGA+GGG | - | chr6_2:58080934-58080953 | None:intergenic | 40.0% |
| !! | TGGTTGGTTTATTTGTAGGG+AGG | - | chr6_2:58080935-58080954 | None:intergenic | 40.0% |
| CGTTAAACGTATGTTCTGGT+TGG | - | chr6_2:58080951-58080970 | None:intergenic | 40.0% | |
| ATCGCGTTAAACGTATGTTC+TGG | - | chr6_2:58080955-58080974 | None:intergenic | 40.0% | |
| GGCGTCAAAATAACGTATTG+AGG | + | chr6_2:58081210-58081229 | Msa0921180:intron | 40.0% | |
| CAATTGGAGTAGAAGTAAGC+AGG | + | chr6_2:58081262-58081281 | Msa0921180:intron | 40.0% | |
| GGAGTGATTAGAAAGTCAAG+TGG | + | chr6_2:58081306-58081325 | Msa0921180:intron | 40.0% | |
| ! | GTGTATGAGCTGGATTTGTT+TGG | - | chr6_2:58081720-58081739 | None:intergenic | 40.0% |
| !! | TCTATTTGCTGTGTATGAGC+TGG | - | chr6_2:58081730-58081749 | None:intergenic | 40.0% |
| AGAGATCTTCACATTGGCAT+AGG | - | chr6_2:58082128-58082147 | None:intergenic | 40.0% | |
| TGCCAATGTGAAGATCTCTT+AGG | + | chr6_2:58082129-58082148 | Msa0921180:intron | 40.0% | |
| AGCCTAAGAGATCTTCACAT+TGG | - | chr6_2:58082134-58082153 | None:intergenic | 40.0% | |
| !! | AGCTTTGTTTGCGAGTTTCA+AGG | + | chr6_2:58082156-58082175 | Msa0921180:intron | 40.0% |
| !! | GCTTTGTTTGCGAGTTTCAA+GGG | + | chr6_2:58082157-58082176 | Msa0921180:intron | 40.0% |
| ! | CTTTGTTTGCGAGTTTCAAG+GGG | + | chr6_2:58082158-58082177 | Msa0921180:intron | 40.0% |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | + | chr6_2:58082319-58082338 | Msa0921180:intron | 40.0% |
| ! | TTGTATTGGAGGAGGGTTTT+GGG | + | chr6_2:58082320-58082339 | Msa0921180:intron | 40.0% |
| !! | CTTTTGGGGGTGAGAAATAT+AGG | - | chr6_2:58082491-58082510 | None:intergenic | 40.0% |
| !! | TAAGGCTTTGTTTGGGAGTT+TGG | - | chr6_2:58082533-58082552 | None:intergenic | 40.0% |
| AAACTCCCAAACAAAGCCTT+AGG | + | chr6_2:58082532-58082551 | Msa0921180:intron | 40.0% | |
| !! | ACACACCTAAGGCTTTGTTT+GGG | - | chr6_2:58082540-58082559 | None:intergenic | 40.0% |
| GTTTATCGATCACACACCTA+AGG | - | chr6_2:58082551-58082570 | None:intergenic | 40.0% | |
| AGGGTTTGAAGAGCTCATTA+GGG | - | chr6_2:58082602-58082621 | None:intergenic | 40.0% | |
| TAGGGTTTGAAGAGCTCATT+AGG | - | chr6_2:58082603-58082622 | None:intergenic | 40.0% | |
| GGGTATCTACACTTTGCTTT+GGG | - | chr6_2:58083004-58083023 | None:intergenic | 40.0% | |
| TGGGTATCTACACTTTGCTT+TGG | - | chr6_2:58083005-58083024 | None:intergenic | 40.0% | |
| GATCAAAGCTCCCCAAAATT+GGG | - | chr6_2:58083024-58083043 | None:intergenic | 40.0% | |
| TGATCAAAGCTCCCCAAAAT+TGG | - | chr6_2:58083025-58083044 | None:intergenic | 40.0% | |
| ! | GTTGCTAGGTATTGTTGTTG+TGG | + | chr6_2:58083893-58083912 | Msa0921180:intron | 40.0% |
| CTCCAGTGTAATTCTAGATG+TGG | + | chr6_2:58084220-58084239 | Msa0921180:intron | 40.0% | |
| ! | CTCCACATCTAGAATTACAC+TGG | - | chr6_2:58084225-58084244 | None:intergenic | 40.0% |
| CAGTGTAATTCTAGATGTGG+AGG | + | chr6_2:58084223-58084242 | Msa0921180:intron | 40.0% | |
| TTCCGGTTCTCACTATAAGT+AGG | + | chr6_2:58084260-58084279 | Msa0921180:intron | 40.0% | |
| CACCTACTTATAGTGAGAAC+CGG | - | chr6_2:58084265-58084284 | None:intergenic | 40.0% | |
| TTCTCACTATAAGTAGGTGG+TGG | + | chr6_2:58084266-58084285 | Msa0921180:intron | 40.0% | |
| ! | TTAAGTCGGTAGTTGATGTG+TGG | + | chr6_2:58084303-58084322 | Msa0921180:intron | 40.0% |
| ! | TAAGTCGGTAGTTGATGTGT+GGG | + | chr6_2:58084304-58084323 | Msa0921180:intron | 40.0% |
| !!! | GGCTTGGTCCATTTTGTTTT+TGG | + | chr6_2:58084413-58084432 | Msa0921180:intron | 40.0% |
| ACGTAGTGTCCTAAATTGGT+TGG | - | chr6_2:58085258-58085277 | None:intergenic | 40.0% | |
| GTACACGTAGTGTCCTAAAT+TGG | - | chr6_2:58085262-58085281 | None:intergenic | 40.0% | |
| AGTTGCATGACATACAATCC+TGG | + | chr6_2:58085756-58085775 | Msa0921180:intron | 40.0% | |
| !!! | ATGCTGTTTTTGAGGAACTC+AGG | - | chr6_2:58085783-58085802 | None:intergenic | 40.0% |
| !!! | TCATGCGAATGCTGTTTTTG+AGG | - | chr6_2:58085791-58085810 | None:intergenic | 40.0% |
| CGCATGAAACCAGATTTAGA+TGG | + | chr6_2:58085804-58085823 | Msa0921180:intron | 40.0% | |
| ! | TGGAACATTTTCGGAGTCTT+CGG | + | chr6_2:58086109-58086128 | Msa0921180:CDS | 40.0% |
| CAAAGATTGAACAAGGTAGG+TGG | + | chr6_2:58086144-58086163 | Msa0921180:CDS | 40.0% | |
| ACAACATGTTCATTTGCCCT+AGG | - | chr6_2:58086173-58086192 | None:intergenic | 40.0% | |
| !! | AAGGAGTTTGCTGATTTGGT+TGG | + | chr6_2:58086227-58086246 | Msa0921180:CDS | 40.0% |
| GTGAAGGAGTCTATTCAAAG+AGG | + | chr6_2:58086329-58086348 | Msa0921180:CDS | 40.0% | |
| !! | GTTGTGCGGTTTGGTATTCT+TGG | + | chr6_2:58079619-58079638 | Msa0921180:CDS | 45.0% |
| !! | GGAGAAAGCAACTGCTTTTG+CGG | + | chr6_2:58079726-58079745 | Msa0921180:CDS | 45.0% |
| GGAAGATAATGAGGTAGACG+CGG | + | chr6_2:58079804-58079823 | Msa0921180:intron | 45.0% | |
| GATAGCCCACATCATATGCA+AGG | - | chr6_2:58079851-58079870 | None:intergenic | 45.0% | |
| ! | GCATATGATGTGGGCTATCA+AGG | + | chr6_2:58079852-58079871 | Msa0921180:CDS | 45.0% |
| GCATATGTTGTTGGAGAAGC+CGG | + | chr6_2:58079891-58079910 | Msa0921180:CDS | 45.0% | |
| TGAATGTGTCGGAGCTTGAT+CGG | + | chr6_2:58079920-58079939 | Msa0921180:CDS | 45.0% | |
| TCGGATTCTTGAAGCTTGTG+AGG | + | chr6_2:58079939-58079958 | Msa0921180:CDS | 45.0% | |
| CTTGAAGCTTGTGAGGCTAA+TGG | + | chr6_2:58079946-58079965 | Msa0921180:CDS | 45.0% | |
| GGCTAATGGAGTGCAGTTTA+TGG | + | chr6_2:58079960-58079979 | Msa0921180:CDS | 45.0% | |
| ! | TTGCGTGATGAGCAACGTTT+TGG | + | chr6_2:58080033-58080052 | Msa0921180:intron | 45.0% |
| GCTGAAATCAAGGGAGGTAA+TGG | - | chr6_2:58080479-58080498 | None:intergenic | 45.0% | |
| TACACATGCGCGCGTTAAAA+AGG | + | chr6_2:58080869-58080888 | Msa0921180:intron | 45.0% | |
| AAGGAGAGAGATATTGAGCG+TGG | - | chr6_2:58081963-58081982 | None:intergenic | 45.0% | |
| TTTGCGAGTTTCAAGGGGAA+GGG | + | chr6_2:58082163-58082182 | Msa0921180:intron | 45.0% | |
| ! | GGGGATGGTTTGGGAAAAAA+AGG | + | chr6_2:58082194-58082213 | Msa0921180:intron | 45.0% |
| ! | TGTATTGGAGGAGGGTTTTG+GGG | + | chr6_2:58082321-58082340 | Msa0921180:intron | 45.0% |
| TTGGGGGTGAGAAATATAGG+AGG | - | chr6_2:58082488-58082507 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGGGAGTTTGGAG+AGG | - | chr6_2:58082528-58082547 | None:intergenic | 45.0% |
| !! | CACACACCTAAGGCTTTGTT+TGG | - | chr6_2:58082541-58082560 | None:intergenic | 45.0% |
| TCAAAAGAGGCCTACTCACT+AGG | - | chr6_2:58083064-58083083 | None:intergenic | 45.0% | |
| ATGTGATGAGAAAAGGGTGG+TGG | + | chr6_2:58083263-58083282 | Msa0921180:intron | 45.0% | |
| !! | CCTGGTGGGTCATTTTCTAT+GGG | + | chr6_2:58083286-58083305 | Msa0921180:intron | 45.0% |
| ATAGTGAGAACCGGAACTTC+TGG | - | chr6_2:58084256-58084275 | None:intergenic | 45.0% | |
| CGGTTCTCACTATAAGTAGG+TGG | + | chr6_2:58084263-58084282 | Msa0921180:intron | 45.0% | |
| ! | AAGTCGGTAGTTGATGTGTG+GGG | + | chr6_2:58084305-58084324 | Msa0921180:intron | 45.0% |
| TGGTATGAGTCATTAGGAGG+AGG | + | chr6_2:58084433-58084452 | Msa0921180:intron | 45.0% | |
| GGTATGAGTCATTAGGAGGA+GGG | + | chr6_2:58084434-58084453 | Msa0921180:intron | 45.0% | |
| !! | TGTGTGTTGGTTTCCTTTGG+TGG | + | chr6_2:58084479-58084498 | Msa0921180:intron | 45.0% |
| !! | TTTTTGAGGAACTCAGGACC+AGG | - | chr6_2:58085777-58085796 | None:intergenic | 45.0% |
| GCACCAAGACCATCTAAATC+TGG | - | chr6_2:58085816-58085835 | None:intergenic | 45.0% | |
| !! | TTAGATGGTCTTGGTGCTCT+TGG | + | chr6_2:58085819-58085838 | Msa0921180:CDS | 45.0% |
| ACAACTGACCATGTCTTCTC+AGG | - | chr6_2:58086278-58086297 | None:intergenic | 45.0% | |
| ACTTGTGTTGGATGCTGTGA+AGG | + | chr6_2:58086313-58086332 | Msa0921180:CDS | 45.0% | |
| !!! | TTAATAAGAAAAATTTTATT+TGG | + | chr6_2:58080173-58080192 | Msa0921180:intron | 5.0% |
| !!! | TAATAAGAAAAATTTTATTT+GGG | + | chr6_2:58080174-58080193 | Msa0921180:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTGA+AGG | + | chr6_2:58080577-58080596 | Msa0921180:intron | 5.0% |
| !! | TATTATAAAAGTTAATATAT+AGG | + | chr6_2:58081179-58081198 | Msa0921180:intron | 5.0% |
| !!! | ATAATTTATTTGATATTTTT+TGG | - | chr6_2:58082841-58082860 | None:intergenic | 5.0% |
| TGGCTGATGAAACGGTTGTG+CGG | + | chr6_2:58079605-58079624 | Msa0921180:CDS | 50.0% | |
| GATGAAACGGTTGTGCGGTT+TGG | + | chr6_2:58079610-58079629 | Msa0921180:CDS | 50.0% | |
| AGCCATTGGAAGCCGTTCTT+TGG | + | chr6_2:58079705-58079724 | Msa0921180:CDS | 50.0% | |
| CTCCAAAGAACGGCTTCCAA+TGG | - | chr6_2:58079710-58079729 | None:intergenic | 50.0% | |
| !! | GAAAGCAACTGCTTTTGCGG+CGG | + | chr6_2:58079729-58079748 | Msa0921180:CDS | 50.0% |
| CACATCATATGCAAGGCCGT+CGG | - | chr6_2:58079844-58079863 | None:intergenic | 50.0% | |
| GACGGCCTTGCATATGATGT+GGG | + | chr6_2:58079843-58079862 | Msa0921180:CDS | 50.0% | |
| CAACATATGCTTCCCCCTCT+CGG | - | chr6_2:58079881-58079900 | None:intergenic | 50.0% | |
| ! | GAGGGGGAAGCATATGTTGT+TGG | + | chr6_2:58079882-58079901 | Msa0921180:CDS | 50.0% |
| TCCGACACATTCATTGCGAC+CGG | - | chr6_2:58079913-58079932 | None:intergenic | 50.0% | |
| AAATTATCTCTCCCCTCCCC+AGG | + | chr6_2:58080323-58080342 | Msa0921180:intron | 50.0% | |
| TGGAGAGGATCCTAACTCCT+GGG | - | chr6_2:58080343-58080362 | None:intergenic | 50.0% | |
| AGGAGTTAGGATCCTCTCCA+GGG | + | chr6_2:58080343-58080362 | Msa0921180:intron | 50.0% | |
| CAAGAGTCTTGGATACGCCA+CGG | + | chr6_2:58080907-58080926 | Msa0921180:intron | 50.0% | |
| GTTTGCGAGTTTCAAGGGGA+AGG | + | chr6_2:58082162-58082181 | Msa0921180:intron | 50.0% | |
| AGTTTCAAGGGGAAGGGACT+AGG | + | chr6_2:58082169-58082188 | Msa0921180:intron | 50.0% | |
| GTTTCAAGGGGAAGGGACTA+GGG | + | chr6_2:58082170-58082189 | Msa0921180:intron | 50.0% | |
| ACATTGGGAGGAGAGAGCTT+TGG | + | chr6_2:58082242-58082261 | Msa0921180:intron | 50.0% | |
| !!! | AGGGTTTTGGGGAGTTTGGA+AGG | + | chr6_2:58082332-58082351 | Msa0921180:intron | 50.0% |
| !!! | GGGTTTTGGGGAGTTTGGAA+GGG | + | chr6_2:58082333-58082352 | Msa0921180:intron | 50.0% |
| ! | AGGGGAAGGAAGAGCTTTTG+GGG | - | chr6_2:58082505-58082524 | None:intergenic | 50.0% |
| ! | GAGGGGAAGGAAGAGCTTTT+GGG | - | chr6_2:58082506-58082525 | None:intergenic | 50.0% |
| TTTGGGAGTTTGGAGAGGAG+GGG | - | chr6_2:58082523-58082542 | None:intergenic | 50.0% | |
| GTTTGGGAGTTTGGAGAGGA+GGG | - | chr6_2:58082524-58082543 | None:intergenic | 50.0% | |
| TGTTTGGGAGTTTGGAGAGG+AGG | - | chr6_2:58082525-58082544 | None:intergenic | 50.0% | |
| !! | GCCTGGTGGGTCATTTTCTA+TGG | + | chr6_2:58083285-58083304 | Msa0921180:intron | 50.0% |
| CCCATAGAAAATGACCCACC+AGG | - | chr6_2:58083289-58083308 | None:intergenic | 50.0% | |
| ATTTAGGGGAGGCAGTTGCT+AGG | + | chr6_2:58083879-58083898 | Msa0921180:intron | 50.0% | |
| ! | GATGTGTGGGGAGACTTGTT+TGG | + | chr6_2:58084317-58084336 | Msa0921180:intron | 50.0% |
| !! | GTGTTGGTTTCCTTTGGTGG+TGG | + | chr6_2:58084482-58084501 | Msa0921180:intron | 50.0% |
| !! | GTTTCCTTTGGTGGTGGTGT+CGG | + | chr6_2:58084488-58084507 | Msa0921180:intron | 50.0% |
| !! | CTTGGTGCTCTTGGTGACAT+AGG | + | chr6_2:58085828-58085847 | Msa0921180:CDS | 50.0% |
| ! | GTGCTCTTGGTGACATAGGT+TGG | + | chr6_2:58085832-58085851 | Msa0921180:CDS | 50.0% |
| AACAAGGTAGGTGGTGTCCT+AGG | + | chr6_2:58086153-58086172 | Msa0921180:CDS | 50.0% | |
| ACAAGGTAGGTGGTGTCCTA+GGG | + | chr6_2:58086154-58086173 | Msa0921180:CDS | 50.0% | |
| TAGGGTTTACGGGAGCTACG+AGG | + | chr6_2:58079774-58079793 | Msa0921180:CDS | 55.0% | |
| GGTCTACATCCCTCTTCCGA+CGG | + | chr6_2:58079825-58079844 | Msa0921180:CDS | 55.0% | |
| TATGCAAGGCCGTCGGAAGA+GGG | - | chr6_2:58079837-58079856 | None:intergenic | 55.0% | |
| ATATGCAAGGCCGTCGGAAG+AGG | - | chr6_2:58079838-58079857 | None:intergenic | 55.0% | |
| CGACGGCCTTGCATATGATG+TGG | + | chr6_2:58079842-58079861 | Msa0921180:CDS | 55.0% | |
| GCCGGTCGCAATGAATGTGT+CGG | + | chr6_2:58079909-58079928 | Msa0921180:CDS | 55.0% | |
| AGGATCCTAACTCCTGGGGA+GGG | - | chr6_2:58080338-58080357 | None:intergenic | 55.0% | |
| GGAGAGGATCCTAACTCCTG+GGG | - | chr6_2:58080342-58080361 | None:intergenic | 55.0% | |
| CTGGAGAGGATCCTAACTCC+TGG | - | chr6_2:58080344-58080363 | None:intergenic | 55.0% | |
| CAGGAGTTAGGATCCTCTCC+AGG | + | chr6_2:58080342-58080361 | Msa0921180:intron | 55.0% | |
| TTAGGATCCTCTCCAGGGAG+CGG | + | chr6_2:58080348-58080367 | Msa0921180:intron | 55.0% | |
| TTATTTGTAGGGAGGGGCCG+TGG | - | chr6_2:58080927-58080946 | None:intergenic | 55.0% | |
| GACTAGGGAGGGGATGGTTT+GGG | + | chr6_2:58082185-58082204 | Msa0921180:intron | 55.0% | |
| ! | TTGGGAGGAGAGAGCTTTGG+AGG | + | chr6_2:58082245-58082264 | Msa0921180:intron | 55.0% |
| !! | TGGGAGGAGAGAGCTTTGGA+GGG | + | chr6_2:58082246-58082265 | Msa0921180:intron | 55.0% |
| !!! | GAGGAGGGTTTTGGGGAGTT+TGG | + | chr6_2:58082328-58082347 | Msa0921180:intron | 55.0% |
| ! | GGGGAAGGAAGAGCTTTTGG+GGG | - | chr6_2:58082504-58082523 | None:intergenic | 55.0% |
| ! | GGAGGGGAAGGAAGAGCTTT+TGG | - | chr6_2:58082507-58082526 | None:intergenic | 55.0% |
| ! | ATGAGAAAAGGGTGGTGGCC+TGG | + | chr6_2:58083268-58083287 | Msa0921180:intron | 55.0% |
| !! | ACTGCTTTTGCGGCGGAGCA+AGG | + | chr6_2:58079736-58079755 | Msa0921180:CDS | 60.0% |
| !! | CTGCTTTTGCGGCGGAGCAA+GGG | + | chr6_2:58079737-58079756 | Msa0921180:CDS | 60.0% |
| CCGTAAACCCTAACCGCCTC+CGG | - | chr6_2:58079766-58079785 | None:intergenic | 60.0% | |
| CCGGAGGCGGTTAGGGTTTA+CGG | + | chr6_2:58079763-58079782 | Msa0921180:CDS | 60.0% | |
| CGGAGGCGGTTAGGGTTTAC+GGG | + | chr6_2:58079764-58079783 | Msa0921180:CDS | 60.0% | |
| ! | CGGGAGCTACGAGGCTGTTT+TGG | + | chr6_2:58079783-58079802 | Msa0921180:intron | 60.0% |
| CATATGCTTCCCCCTCTCGG+CGG | - | chr6_2:58079878-58079897 | None:intergenic | 60.0% | |
| GGATCCTAACTCCTGGGGAG+GGG | - | chr6_2:58080337-58080356 | None:intergenic | 60.0% | |
| GAGGATCCTAACTCCTGGGG+AGG | - | chr6_2:58080339-58080358 | None:intergenic | 60.0% | |
| AACACACTGGATCCGCTCCC+TGG | - | chr6_2:58080363-58080382 | None:intergenic | 60.0% | |
| TCAAGGGGAAGGGACTAGGG+AGG | + | chr6_2:58082173-58082192 | Msa0921180:intron | 60.0% | |
| CAAGGGGAAGGGACTAGGGA+GGG | + | chr6_2:58082174-58082193 | Msa0921180:intron | 60.0% | |
| AAGGGGAAGGGACTAGGGAG+GGG | + | chr6_2:58082175-58082194 | Msa0921180:intron | 60.0% | |
| GGACTAGGGAGGGGATGGTT+TGG | + | chr6_2:58082184-58082203 | Msa0921180:intron | 60.0% | |
| GGAGTTTGGAGAGGAGGGGA+AGG | - | chr6_2:58082519-58082538 | None:intergenic | 60.0% | |
| ! | AGAAAAGGGTGGTGGCCTGG+TGG | + | chr6_2:58083271-58083290 | Msa0921180:intron | 60.0% |
| ! | GAAAAGGGTGGTGGCCTGGT+GGG | + | chr6_2:58083272-58083291 | Msa0921180:intron | 60.0% |
| ACGACCGACACCACCACCAA+AGG | - | chr6_2:58084495-58084514 | None:intergenic | 60.0% | |
| AAGGGTTGCCGGAGGCGGTT+AGG | + | chr6_2:58079755-58079774 | Msa0921180:CDS | 65.0% | |
| AGGGTTGCCGGAGGCGGTTA+GGG | + | chr6_2:58079756-58079775 | Msa0921180:CDS | 65.0% | |
| GGCTATCAAGGCCGCCGAGA+GGG | + | chr6_2:58079864-58079883 | Msa0921180:CDS | 65.0% | |
| GCTATCAAGGCCGCCGAGAG+GGG | + | chr6_2:58079865-58079884 | Msa0921180:CDS | 65.0% | |
| CTATCAAGGCCGCCGAGAGG+GGG | + | chr6_2:58079866-58079885 | Msa0921180:CDS | 65.0% | |
| CTCTCCCCTCCCCAGGAGTT+AGG | + | chr6_2:58080330-58080349 | Msa0921180:intron | 65.0% | |
| ACTGGATCCGCTCCCTGGAG+AGG | - | chr6_2:58080358-58080377 | None:intergenic | 65.0% | |
| GGAAGGGACTAGGGAGGGGA+TGG | + | chr6_2:58082179-58082198 | Msa0921180:intron | 65.0% | |
| TGCGGCGGAGCAAGGGTTGC+CGG | + | chr6_2:58079744-58079763 | Msa0921180:CDS | 70.0% | |
| GGAGCAAGGGTTGCCGGAGG+CGG | + | chr6_2:58079750-58079769 | Msa0921180:CDS | 70.0% | |
| GGGCTATCAAGGCCGCCGAG+AGG | + | chr6_2:58079863-58079882 | Msa0921180:CDS | 70.0% | |
| GGCGGAGCAAGGGTTGCCGG+AGG | + | chr6_2:58079747-58079766 | Msa0921180:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 58079604 | 58086382 | 58079604 | ID=Msa0921180;Name=Msa0921180 |
| chr6_2 | mRNA | 58079604 | 58086382 | 58079604 | ID=Msa0921180-mRNA-1;Parent=Msa0921180;Name=Msa0921180-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|0|0|3|0|330 |
| chr6_2 | exon | 58079604 | 58079798 | 58079604 | ID=Msa0921180-mRNA-1:exon:8645;Parent=Msa0921180-mRNA-1 |
| chr6_2 | exon | 58079817 | 58080048 | 58079817 | ID=Msa0921180-mRNA-1:exon:8646;Parent=Msa0921180-mRNA-1 |
| chr6_2 | exon | 58085817 | 58086382 | 58085817 | ID=Msa0921180-mRNA-1:exon:8647;Parent=Msa0921180-mRNA-1 |
| chr6_2 | CDS | 58079604 | 58079798 | 58079604 | ID=Msa0921180-mRNA-1:cds;Parent=Msa0921180-mRNA-1 |
| chr6_2 | CDS | 58079817 | 58080048 | 58079817 | ID=Msa0921180-mRNA-1:cds;Parent=Msa0921180-mRNA-1 |
| chr6_2 | CDS | 58085817 | 58086382 | 58085817 | ID=Msa0921180-mRNA-1:cds;Parent=Msa0921180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
