Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0968150 | KEH40022.1 | 96.250 | 320 | 12 | 0 | 1 | 320 | 1 | 320 | 0.0 | 640 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018120 | Msa0968150 | 0.868180 | 7.906345e-66 | -8.615850e-47 |
| Msa0076700 | Msa0968150 | 0.822244 | 2.627633e-53 | -8.615850e-47 |
| Msa0097230 | Msa0968150 | 0.867097 | 1.758840e-65 | -8.615850e-47 |
| Msa0097320 | Msa0968150 | 0.879940 | 8.266078e-70 | -8.615850e-47 |
| Msa0603370 | Msa0968150 | 0.801745 | 7.788604e-49 | -8.615850e-47 |
| Msa0622600 | Msa0968150 | 0.809372 | 1.954525e-50 | -8.615850e-47 |
| Msa0750950 | Msa0968150 | 0.810748 | 9.880344e-51 | -8.615850e-47 |
| Msa0773310 | Msa0968150 | 0.812025 | 5.217124e-51 | -8.615850e-47 |
| Msa0810760 | Msa0968150 | 0.808412 | 3.137399e-50 | -8.615850e-47 |
| Msa0169820 | Msa0968150 | 0.809503 | 1.832015e-50 | -8.615850e-47 |
| Msa0175050 | Msa0968150 | 0.807106 | 5.942782e-50 | -8.615850e-47 |
| Msa0269560 | Msa0968150 | 0.800314 | 1.527229e-48 | -8.615850e-47 |
| Msa0278900 | Msa0968150 | 0.802060 | 6.710886e-49 | -8.615850e-47 |
| Msa0525610 | Msa0968150 | 0.806155 | 9.434470e-50 | -8.615850e-47 |
| Msa0881160 | Msa0968150 | 0.809682 | 1.676910e-50 | -8.615850e-47 |
| Msa0968150 | Msa1205390 | 0.817312 | 3.520175e-52 | -8.615850e-47 |
| Msa0968150 | Msa1288450 | 0.813978 | 1.946398e-51 | -8.615850e-47 |
| Msa0968150 | Msa1297310 | 0.817075 | 3.979337e-52 | -8.615850e-47 |
| Msa0968150 | Msa1335710 | 0.813365 | 2.656085e-51 | -8.615850e-47 |
| Msa0968150 | Msa1385020 | 0.817726 | 2.839205e-52 | -8.615850e-47 |
| Msa0968150 | Msa1458510 | 0.802821 | 4.677688e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0968150 | MtrunA17_Chr1g0152781 | 96.262 | 321 | 12 | 0 | 1 | 321 | 1 | 321 | 0.0 | 610 |
| Msa0968150 | MtrunA17_Chr3g0134601 | 58.824 | 340 | 115 | 6 | 1 | 324 | 1 | 331 | 7.94e-127 | 369 |
| Msa0968150 | MtrunA17_Chr4g0072471 | 57.971 | 138 | 56 | 2 | 1 | 137 | 3 | 139 | 7.05e-40 | 145 |
| Msa0968150 | MtrunA17_Chr1g0152821 | 66.327 | 98 | 25 | 4 | 317 | 408 | 8 | 103 | 2.14e-31 | 115 |
| Msa0968150 | MtrunA17_Chr8g0340221 | 52.113 | 71 | 27 | 2 | 318 | 388 | 9 | 72 | 1.85e-15 | 72.8 |
| Msa0968150 | MtrunA17_Chr8g0376941 | 43.137 | 102 | 38 | 3 | 317 | 403 | 8 | 104 | 4.16e-13 | 65.5 |
| Msa0968150 | MtrunA17_Chr8g0340241 | 43.210 | 81 | 41 | 4 | 318 | 394 | 10 | 89 | 1.27e-11 | 60.5 |
| Msa0968150 | MtrunA17_Chr8g0339001 | 56.897 | 58 | 21 | 2 | 317 | 373 | 8 | 62 | 2.02e-11 | 60.1 |
| Msa0968150 | MtrunA17_Chr8g0339771 | 47.945 | 73 | 31 | 4 | 317 | 384 | 9 | 79 | 7.70e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0968150 | AT1G27700.1 | 44.237 | 321 | 152 | 4 | 1 | 321 | 1 | 294 | 1.02e-87 | 268 |
| Msa0968150 | AT2G18860.3 | 50.000 | 138 | 60 | 2 | 1 | 137 | 3 | 132 | 2.03e-34 | 129 |
| Msa0968150 | AT2G18860.1 | 50.000 | 138 | 60 | 2 | 1 | 137 | 3 | 132 | 5.05e-34 | 129 |
| Msa0968150 | AT4G30240.1 | 40.090 | 222 | 119 | 6 | 1 | 214 | 3 | 218 | 9.51e-34 | 128 |
| Msa0968150 | AT2G18860.2 | 48.673 | 113 | 49 | 2 | 26 | 137 | 9 | 113 | 8.37e-24 | 100 |
Find 111 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAAAATTGATGAAAATT+TGG | 0.141221 | 6_3:+98330633 | None:intergenic |
| CTTGACGCCATGAATTAAAA+TGG | 0.192881 | 6_3:+98330598 | None:intergenic |
| TCACGGAAGGATTTCAATAT+TGG | 0.201564 | 6_3:+98326402 | None:intergenic |
| GAGCTTGCTTTGTTTCTTTC+GGG | 0.219757 | 6_3:-98329814 | Msa0968150:CDS |
| CGAGCTTGCTTTGTTTCTTT+CGG | 0.245739 | 6_3:-98329815 | Msa0968150:CDS |
| AAATCTCTTCTAAGTTCATT+AGG | 0.250806 | 6_3:+98330166 | None:intergenic |
| CATAAGGTGCCAAGTTTATC+AGG | 0.253350 | 6_3:-98329586 | Msa0968150:CDS |
| GAGAATGAAGCGGGTATAAT+AGG | 0.277243 | 6_3:+98330841 | None:intergenic |
| ATTTACTGCTTCAGTTGTTT+TGG | 0.278796 | 6_3:-98326671 | Msa0968150:intron |
| ATCTCAGACATGGGTGGTTT+TGG | 0.291220 | 6_3:-98329854 | Msa0968150:CDS |
| CTACCCTTGGCACTGCTAAA+TGG | 0.295554 | 6_3:-98330138 | Msa0968150:CDS |
| CTGTCCTCCTCAACCTAATA+AGG | 0.302107 | 6_3:-98326458 | Msa0968150:CDS |
| GGCACCTTATGCATTGGATT+TGG | 0.302310 | 6_3:+98329598 | None:intergenic |
| CACGGAAGGATTTCAATATT+GGG | 0.315267 | 6_3:+98326403 | None:intergenic |
| TGCTATGACAAGCATCTCTA+TGG | 0.338103 | 6_3:-98329262 | Msa0968150:CDS |
| AGTTCCTCCAGCGGTTCTTC+TGG | 0.341641 | 6_3:-98329622 | Msa0968150:CDS |
| AATCTCTTCTAAGTTCATTA+GGG | 0.345075 | 6_3:+98330167 | None:intergenic |
| CCAAGTTTATCAGGATTTCT+TGG | 0.347997 | 6_3:-98329577 | Msa0968150:CDS |
| ATTCAGTTGCATCTGGTGTT+GGG | 0.352535 | 6_3:-98329747 | Msa0968150:CDS |
| TAATGCTGCCGAAGAAGTTC+AGG | 0.352747 | 6_3:-98330545 | Msa0968150:CDS |
| GCGGCGGCGAGAACACCTTT+TGG | 0.356785 | 6_3:+98326557 | None:intergenic |
| GTGGATTGGAGATCCTTATT+AGG | 0.363498 | 6_3:+98326445 | None:intergenic |
| TTCCAATGGCTGAATTGAAC+AGG | 0.368336 | 6_3:-98329459 | Msa0968150:CDS |
| AGGAATTTGAACGCGAAGTT+AGG | 0.368679 | 6_3:-98330005 | Msa0968150:CDS |
| AAGCGGGTATAATAGGATTA+AGG | 0.371922 | 6_3:+98330848 | None:intergenic |
| AAGAGTTCTGGTTAGTTTGT+TGG | 0.378142 | 6_3:+98330814 | None:intergenic |
| TTCTCGCCGCCGCCGATGCC+AGG | 0.396969 | 6_3:-98326547 | Msa0968150:CDS |
| GGGTTGTTGCTTTCAGCTGC+CGG | 0.409203 | 6_3:+98329787 | None:intergenic |
| TTTCCTGACGATTGTCCTCC+AGG | 0.412015 | 6_3:-98326493 | Msa0968150:CDS |
| TTCATTAGGGTTCCACATGC+TGG | 0.412123 | 6_3:+98330180 | None:intergenic |
| TAGATCCGAAAGAAGAGTTC+TGG | 0.417811 | 6_3:+98330802 | None:intergenic |
| GTCTGAGATGCCTTTCTACC+TGG | 0.425960 | 6_3:+98329868 | None:intergenic |
| AAAATTGAATAACATTAAGT+TGG | 0.426618 | 6_3:+98330733 | None:intergenic |
| ATTGAAACAATTATTCGAAC+AGG | 0.428378 | 6_3:+98329178 | None:intergenic |
| GCTAGCGCTAGTGCTGATAT+TGG | 0.431805 | 6_3:-98329685 | Msa0968150:CDS |
| TGGAGATCCTTATTAGGTTG+AGG | 0.434955 | 6_3:+98326451 | None:intergenic |
| ACTAACCAGAACTCTTCTTT+CGG | 0.435173 | 6_3:-98330807 | Msa0968150:five_prime_UTR |
| CAGGCCGACTGTATTGCATT+TGG | 0.439081 | 6_3:+98329197 | None:intergenic |
| TGCAGATTCCTGAACTTCTT+CGG | 0.440150 | 6_3:+98330537 | None:intergenic |
| AATTCAGTTGCATCTGGTGT+TGG | 0.446579 | 6_3:-98329748 | Msa0968150:CDS |
| AAACTTGGCACCTTATGCAT+TGG | 0.454157 | 6_3:+98329592 | None:intergenic |
| ATCTGGTGTTGGGGAAGAAA+AGG | 0.470868 | 6_3:-98329737 | Msa0968150:CDS |
| GGCTATAGTGCTGAGGGTGC+AGG | 0.475463 | 6_3:-98326622 | Msa0968150:CDS |
| ATTGAATAACATTAAGTTGG+TGG | 0.479527 | 6_3:+98330736 | None:intergenic |
| CCAAGAAATCCTGATAAACT+TGG | 0.487329 | 6_3:+98329577 | None:intergenic |
| AGGTATCACGTGGGCATCGT+AGG | 0.488724 | 6_3:-98329711 | Msa0968150:CDS |
| GAAGGATGGAATCTACATAT+AGG | 0.489714 | 6_3:-98330231 | Msa0968150:intron |
| ACCCTGTTCAATTCAGCCAT+TGG | 0.493805 | 6_3:+98329457 | None:intergenic |
| TTTGTTTCTTTCGGGAATGC+CGG | 0.494226 | 6_3:-98329806 | Msa0968150:CDS |
| TTGAATAACATTAAGTTGGT+GGG | 0.502002 | 6_3:+98330737 | None:intergenic |
| AGAGATTTACTTACTACCCT+TGG | 0.502779 | 6_3:-98330151 | Msa0968150:CDS |
| TGGTCCAAATCCAATGCATA+AGG | 0.505191 | 6_3:-98329602 | Msa0968150:CDS |
| CAATTTCGAAATTGATTCCA+CGG | 0.510644 | 6_3:+98329552 | None:intergenic |
| AACGAACCCTCCAGGTAGAA+AGG | 0.511463 | 6_3:-98329878 | Msa0968150:CDS |
| AGTGCTGAGGGTGCAGGAAG+AGG | 0.514309 | 6_3:-98326616 | Msa0968150:CDS |
| GAACAACCTGGCATCGGCGG+CGG | 0.521643 | 6_3:+98326541 | None:intergenic |
| GGACAGTGCTGATGGTAGCC+TGG | 0.521791 | 6_3:+98326475 | None:intergenic |
| AACGAACAACCTGGCATCGG+CGG | 0.525310 | 6_3:+98326538 | None:intergenic |
| GTTAAGTTATAACAGAGACT+TGG | 0.526567 | 6_3:-98329983 | Msa0968150:CDS |
| AAGTTCAGGAATCTGCAGAT+AGG | 0.528981 | 6_3:-98330531 | Msa0968150:intron |
| TTGACGCCATGAATTAAAAT+GGG | 0.533105 | 6_3:+98330599 | None:intergenic |
| TAGCCTGGAGGACAATCGTC+AGG | 0.534529 | 6_3:+98326490 | None:intergenic |
| TAGAAAGGCATCTCAGACAT+GGG | 0.536615 | 6_3:-98329863 | Msa0968150:CDS |
| GGCGTCAAGTCTTGATCGGT+GGG | 0.538666 | 6_3:-98330584 | Msa0968150:CDS |
| CCATGTTTATGAATCCCAAA+AGG | 0.538987 | 6_3:-98326572 | Msa0968150:CDS |
| ATCAGGATTTCTTGGTTCCG+TGG | 0.541306 | 6_3:-98329569 | Msa0968150:CDS |
| CGATGCCAGGTTGTTCGTTG+TGG | 0.545533 | 6_3:-98326534 | Msa0968150:CDS |
| TTCAGTTGCATCTGGTGTTG+GGG | 0.546134 | 6_3:-98329746 | Msa0968150:CDS |
| CAATCCACCACAGCTAAAAG+TGG | 0.547338 | 6_3:-98326430 | Msa0968150:CDS |
| TTTCGAAATTGAAGTGGCCG+AGG | 0.547944 | 6_3:-98329540 | Msa0968150:CDS |
| TTAGATGAAACGAACCCTCC+AGG | 0.548770 | 6_3:-98329886 | Msa0968150:CDS |
| TGGGCGATGATGCAAGAACT+AGG | 0.548917 | 6_3:-98329963 | Msa0968150:CDS |
| AAATTGAAGTGGCCGAGGAA+TGG | 0.551739 | 6_3:-98329535 | Msa0968150:CDS |
| CCTTGGCACTGCTAAATGGC+AGG | 0.552190 | 6_3:-98330134 | Msa0968150:intron |
| TTAAGTTATAACAGAGACTT+GGG | 0.559421 | 6_3:-98329982 | Msa0968150:CDS |
| CACAACGAACAACCTGGCAT+CGG | 0.560505 | 6_3:+98326535 | None:intergenic |
| ATTTGGACCAGAAGAACCGC+TGG | 0.562407 | 6_3:+98329615 | None:intergenic |
| GAGATGCCTTTCTACCTGGA+GGG | 0.562553 | 6_3:+98329872 | None:intergenic |
| GGTATCACGTGGGCATCGTA+GGG | 0.569652 | 6_3:-98329710 | Msa0968150:CDS |
| CTGCCATTTAGCAGTGCCAA+GGG | 0.578353 | 6_3:+98330135 | None:intergenic |
| TGAGATGCCTTTCTACCTGG+AGG | 0.581106 | 6_3:+98329871 | None:intergenic |
| GTTGAGGAGGACAGTGCTGA+TGG | 0.584018 | 6_3:+98326467 | None:intergenic |
| GTAGAAAGGCATCTCAGACA+TGG | 0.584968 | 6_3:-98329864 | Msa0968150:CDS |
| CCTGCCATTTAGCAGTGCCA+AGG | 0.595735 | 6_3:+98330134 | None:intergenic |
| AATCAATTTCGAAATTGAAG+TGG | 0.596466 | 6_3:-98329546 | Msa0968150:CDS |
| TGGCGTCAAGTCTTGATCGG+TGG | 0.597897 | 6_3:-98330585 | Msa0968150:CDS |
| TTATGCCACAACGAACAACC+TGG | 0.598298 | 6_3:+98326529 | None:intergenic |
| AGATCCTTATTAGGTTGAGG+AGG | 0.599142 | 6_3:+98326454 | None:intergenic |
| TCATGGCGTCAAGTCTTGAT+CGG | 0.599437 | 6_3:-98330588 | Msa0968150:CDS |
| TGGTGTTGGGGAAGAAAAGG+AGG | 0.605467 | 6_3:-98329734 | Msa0968150:CDS |
| GATCATCATAAAGAAACTGA+TGG | 0.606309 | 6_3:-98329490 | Msa0968150:CDS |
| TTGAATGGCTATAGTGCTGA+GGG | 0.623017 | 6_3:-98326628 | Msa0968150:CDS |
| CCACAATCTCTCATCACGGA+AGG | 0.627674 | 6_3:+98326389 | None:intergenic |
| TGGAATCTACATATAGGACA+TGG | 0.629104 | 6_3:-98330225 | Msa0968150:CDS |
| ATGACAAGCATCTCTATGGA+TGG | 0.634464 | 6_3:-98329258 | Msa0968150:CDS |
| TGATGGTGCACTAATTCCAA+TGG | 0.646457 | 6_3:-98329473 | Msa0968150:CDS |
| AAGCATCTCTATGGATGGTG+TGG | 0.646497 | 6_3:-98329253 | Msa0968150:CDS |
| CCGACTTACCAATCAAGCAA+AGG | 0.648466 | 6_3:+98329146 | None:intergenic |
| TGTTGGGGAAGAAAAGGAGG+AGG | 0.649476 | 6_3:-98329731 | Msa0968150:CDS |
| AATACCAAATGCAATACAGT+CGG | 0.650211 | 6_3:-98329201 | Msa0968150:CDS |
| TCCAATGGCTGAATTGAACA+GGG | 0.653838 | 6_3:-98329458 | Msa0968150:intron |
| AGCATTCATCAGAACTATCG+AGG | 0.656054 | 6_3:+98329281 | None:intergenic |
| TTTGAATGGCTATAGTGCTG+AGG | 0.658441 | 6_3:-98326629 | Msa0968150:CDS |
| CAGCAGTCTAGTTCCTCCAG+CGG | 0.660392 | 6_3:-98329631 | Msa0968150:CDS |
| GAAAAGGAGGAGGTATCACG+TGG | 0.667131 | 6_3:-98329721 | Msa0968150:CDS |
| CTGGAGGAACTAGACTGCTG+CGG | 0.671536 | 6_3:+98329634 | None:intergenic |
| TGGACCAGAAGAACCGCTGG+AGG | 0.681587 | 6_3:+98329618 | None:intergenic |
| TTATAGAAAACTGAAAACAG+TGG | 0.699925 | 6_3:-98329512 | Msa0968150:CDS |
| AAAGGCATCTCAGACATGGG+TGG | 0.701972 | 6_3:-98329860 | Msa0968150:CDS |
| CAGTGCTGATGGTAGCCTGG+AGG | 0.733652 | 6_3:+98326478 | None:intergenic |
| AAAAGGAGGAGGTATCACGT+GGG | 0.768512 | 6_3:-98329720 | Msa0968150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGAAAACAAAAATAAAA+TGG | + | chr6_3:98326522-98326541 | None:intergenic | 10.0% |
| !!! | TTTATATTTTTTTACTTTGT+TGG | - | chr6_3:98326903-98326922 | Msa0968150:intron | 10.0% |
| !!! | AATTTTTATTATATAATCGT+GGG | + | chr6_3:98327520-98327539 | None:intergenic | 10.0% |
| !! | AAAATTGAATAACATTAAGT+TGG | + | chr6_3:98326554-98326573 | None:intergenic | 15.0% |
| !!! | TATTCAATTTTATCATTCAT+TGG | - | chr6_3:98326563-98326582 | Msa0968150:CDS | 15.0% |
| !! | TTTGAAAATTGATGAAAATT+TGG | + | chr6_3:98326654-98326673 | None:intergenic | 15.0% |
| !! | CTAATAATAAGAATGAAAAT+TGG | + | chr6_3:98326781-98326800 | None:intergenic | 15.0% |
| !!! | TGATATAGAAATTGAATTTT+TGG | - | chr6_3:98326867-98326886 | Msa0968150:intron | 15.0% |
| !!! | GAATTTTTATTATATAATCG+TGG | + | chr6_3:98327521-98327540 | None:intergenic | 15.0% |
| !!! | ATTTTTAGTTCTTAGAATTA+TGG | - | chr6_3:98329174-98329193 | Msa0968150:CDS | 15.0% |
| !!! | TTTAGTTTTAAAAAGAAAGT+TGG | + | chr6_3:98329867-98329886 | None:intergenic | 15.0% |
| !!! | TATTTAATACTTTTTTCAGA+TGG | + | chr6_3:98330166-98330185 | None:intergenic | 15.0% |
| !! | ATTAATTATTCCTTCTATAA+TGG | - | chr6_3:98330375-98330394 | Msa0968150:intron | 15.0% |
| !! | AAAAGTGAATGAATTAAATT+TGG | + | chr6_3:98330464-98330483 | None:intergenic | 15.0% |
| !! | AAATCAATAGTTAGATAAAT+TGG | - | chr6_3:98330493-98330512 | Msa0968150:intron | 15.0% |
| !!! | ATATGGTTTGATTGTTTTTT+TGG | - | chr6_3:98327240-98327259 | Msa0968150:intron | 20.0% |
| !! | AAAAAATGATGTGATAAAAG+AGG | - | chr6_3:98328969-98328988 | Msa0968150:intron | 20.0% |
| !! | AAAAATGATGTGATAAAAGA+GGG | - | chr6_3:98328970-98328989 | Msa0968150:intron | 20.0% |
| !! | ATACCAAATAACTAATAGAA+GGG | - | chr6_3:98329113-98329132 | Msa0968150:intron | 20.0% |
| !!! | AATTCTGTTTTTGAAATTGT+TGG | - | chr6_3:98329144-98329163 | Msa0968150:intron | 20.0% |
| !!! | ATTCTGTTTTTGAAATTGTT+GGG | - | chr6_3:98329145-98329164 | Msa0968150:intron | 20.0% |
| !! | CTAACATAGTTGAAATAAAT+TGG | + | chr6_3:98329918-98329937 | None:intergenic | 20.0% |
| !!! | ATTCATTCACTTTTCATTTA+AGG | - | chr6_3:98330470-98330489 | Msa0968150:intron | 20.0% |
| !!! | TTGAATAACATTAAGTTGGT+GGG | + | chr6_3:98326550-98326569 | None:intergenic | 25.0% |
| !!! | ATTGAATAACATTAAGTTGG+TGG | + | chr6_3:98326551-98326570 | None:intergenic | 25.0% |
| !! | AACAGAGATTTTCTCAATTA+GGG | - | chr6_3:98326593-98326612 | Msa0968150:CDS | 25.0% |
| ! | TTGAATTCATGAAAATCTTG+AGG | - | chr6_3:98326929-98326948 | Msa0968150:intron | 25.0% |
| ! | TCACTAATGCTTGAAATTTA+TGG | - | chr6_3:98327000-98327019 | Msa0968150:intron | 25.0% |
| ! | TGTGTTTATTGTATTGTTGA+AGG | - | chr6_3:98327035-98327054 | Msa0968150:intron | 25.0% |
| ! | TTTATTGTATTGTTGAAGGA+TGG | - | chr6_3:98327039-98327058 | Msa0968150:intron | 25.0% |
| ! | AATCTCTTCTAAGTTCATTA+GGG | + | chr6_3:98327120-98327139 | None:intergenic | 25.0% |
| ! | AAATCTCTTCTAAGTTCATT+AGG | + | chr6_3:98327121-98327140 | None:intergenic | 25.0% |
| ! | AACTACATACATATTTAGCA+AGG | + | chr6_3:98327199-98327218 | None:intergenic | 25.0% |
| !! | TTTGTTTGAGATATTTGATG+AGG | - | chr6_3:98327217-98327236 | Msa0968150:intron | 25.0% |
| ! | TTAAGTTATAACAGAGACTT+GGG | - | chr6_3:98327302-98327321 | Msa0968150:intron | 25.0% |
| ! | AATAAAAATTCAGTTGCATC+TGG | - | chr6_3:98327530-98327549 | Msa0968150:intron | 25.0% |
| ! | AATCAATTTCGAAATTGAAG+TGG | - | chr6_3:98327738-98327757 | Msa0968150:intron | 25.0% |
| ! | TTATAGAAAACTGAAAACAG+TGG | - | chr6_3:98327772-98327791 | Msa0968150:intron | 25.0% |
| ! | AAAACAACAAAAGCAGAATA+AGG | + | chr6_3:98327857-98327876 | None:intergenic | 25.0% |
| ! | ATTGAAACAATTATTCGAAC+AGG | + | chr6_3:98328109-98328128 | None:intergenic | 25.0% |
| !! | ACTTACTACTTTAGAAATTG+AGG | - | chr6_3:98328230-98328249 | Msa0968150:intron | 25.0% |
| !! | CTTACTACTTTAGAAATTGA+GGG | - | chr6_3:98328231-98328250 | Msa0968150:intron | 25.0% |
| ! | ACAAAAACTTAGAAAAAGCA+TGG | + | chr6_3:98328348-98328367 | None:intergenic | 25.0% |
| !! | TATTCAAGTTCATAAAACCT+AGG | - | chr6_3:98328524-98328543 | Msa0968150:intron | 25.0% |
| ! | TATCACATAGGTTAAGAAAT+AGG | + | chr6_3:98328557-98328576 | None:intergenic | 25.0% |
| ! | GAAAAAATGAGGAAATTCTA+TGG | + | chr6_3:98328595-98328614 | None:intergenic | 25.0% |
| ! | CATACCAAATAACTAATAGA+AGG | - | chr6_3:98329112-98329131 | Msa0968150:intron | 25.0% |
| ! | ATTCCCTTCTATTAGTTATT+TGG | + | chr6_3:98329119-98329138 | None:intergenic | 25.0% |
| ! | GTTGAAATTAAAGTCAACTA+AGG | + | chr6_3:98329333-98329352 | None:intergenic | 25.0% |
| !!! | CTTGATCGATTTATTTTCAA+AGG | - | chr6_3:98329558-98329577 | Msa0968150:CDS | 25.0% |
| !! | AACTACTTTAAGAACTCAAA+TGG | + | chr6_3:98329640-98329659 | None:intergenic | 25.0% |
| ! | ATTATGATCTACTGAAAATG+AGG | - | chr6_3:98329707-98329726 | Msa0968150:CDS | 25.0% |
| !!! | TCCAATGTCAATTTTAACAT+TGG | - | chr6_3:98329736-98329755 | Msa0968150:CDS | 25.0% |
| !!! | CCAATGTCAATTTTAACATT+GGG | - | chr6_3:98329737-98329756 | Msa0968150:CDS | 25.0% |
| !!! | CTAAAATATTGATTTACTCC+TGG | - | chr6_3:98329780-98329799 | Msa0968150:CDS | 25.0% |
| ! | AGTCTAATCTAAGTATATCT+TGG | - | chr6_3:98330237-98330256 | Msa0968150:intron | 25.0% |
| ! | AAAGTCAAATGCATAATCAA+TGG | - | chr6_3:98330275-98330294 | Msa0968150:intron | 25.0% |
| ! | ATAATCAATGGCTCAATAAA+AGG | - | chr6_3:98330287-98330306 | Msa0968150:intron | 25.0% |
| ! | GGCAAACAAATGAAAATTAA+GGG | + | chr6_3:98330318-98330337 | None:intergenic | 25.0% |
| ! | TGGCAAACAAATGAAAATTA+AGG | + | chr6_3:98330319-98330338 | None:intergenic | 25.0% |
| ! | GTTAAATGATATAGCAAAAC+TGG | + | chr6_3:98330339-98330358 | None:intergenic | 25.0% |
| ! | AATAGTTAGATAAATTGGAG+TGG | - | chr6_3:98330498-98330517 | Msa0968150:intron | 25.0% |
| ! | CAACAGAGATTTTCTCAATT+AGG | - | chr6_3:98326592-98326611 | Msa0968150:CDS | 30.0% |
| TTGACGCCATGAATTAAAAT+GGG | + | chr6_3:98326688-98326707 | None:intergenic | 30.0% | |
| TGAGATATTTGATGAGGATA+TGG | - | chr6_3:98327223-98327242 | Msa0968150:intron | 30.0% | |
| !!! | TGGTTTGATTGTTTTTTTGG+TGG | - | chr6_3:98327243-98327262 | Msa0968150:intron | 30.0% |
| !!! | GGTTTGATTGTTTTTTTGGT+GGG | - | chr6_3:98327244-98327263 | Msa0968150:intron | 30.0% |
| GTTAAGTTATAACAGAGACT+TGG | - | chr6_3:98327301-98327320 | Msa0968150:intron | 30.0% | |
| ! | AGATTTTATCACTGCTATTG+AGG | - | chr6_3:98327349-98327368 | Msa0968150:intron | 30.0% |
| ! | CAATTTCGAAATTGATTCCA+CGG | + | chr6_3:98327735-98327754 | None:intergenic | 30.0% |
| ! | AGTTTTCTATAACCATTCCT+CGG | + | chr6_3:98327764-98327783 | None:intergenic | 30.0% |
| GATCATCATAAAGAAACTGA+TGG | - | chr6_3:98327794-98327813 | Msa0968150:intron | 30.0% | |
| AATACCAAATGCAATACAGT+CGG | - | chr6_3:98328083-98328102 | Msa0968150:intron | 30.0% | |
| !! | AAACAAGACCTTTGAGATAA+CGG | + | chr6_3:98328285-98328304 | None:intergenic | 30.0% |
| AACTTTGCAGTAATGTATTG+TGG | - | chr6_3:98328375-98328394 | Msa0968150:intron | 30.0% | |
| GTATTGTGGCTTATACTTAT+TGG | - | chr6_3:98328389-98328408 | Msa0968150:intron | 30.0% | |
| ACTTTCTATGGTTATCACAT+AGG | + | chr6_3:98328569-98328588 | None:intergenic | 30.0% | |
| ATTCTATGGTACACTTTCTA+TGG | + | chr6_3:98328581-98328600 | None:intergenic | 30.0% | |
| TAGCAAACAACGAAAAAATG+AGG | + | chr6_3:98328606-98328625 | None:intergenic | 30.0% | |
| ! | CTTTGTTGTACTACATAGTA+AGG | - | chr6_3:98328646-98328665 | Msa0968150:intron | 30.0% |
| !! | TAGTAAGGTGAAGTTGATAA+AGG | - | chr6_3:98328661-98328680 | Msa0968150:intron | 30.0% |
| !! | AGTAAGGTGAAGTTGATAAA+GGG | - | chr6_3:98328662-98328681 | Msa0968150:intron | 30.0% |
| !! | TAAACTAACAGCTTTGGAAT+CGG | + | chr6_3:98328762-98328781 | None:intergenic | 30.0% |
| TTATGCAAGATGAACACTAA+TGG | - | chr6_3:98328845-98328864 | Msa0968150:intron | 30.0% | |
| TATGCAAGATGAACACTAAT+GGG | - | chr6_3:98328846-98328865 | Msa0968150:intron | 30.0% | |
| TCTACCATCTAATCAACTTA+TGG | - | chr6_3:98328881-98328900 | Msa0968150:intron | 30.0% | |
| !! | TCTCACACCTTATCATTTTT+GGG | + | chr6_3:98328920-98328939 | None:intergenic | 30.0% |
| ! | TTCTCACACCTTATCATTTT+TGG | + | chr6_3:98328921-98328940 | None:intergenic | 30.0% |
| TAAAAGAGGGATAAAGAGAA+AGG | - | chr6_3:98328983-98329002 | Msa0968150:intron | 30.0% | |
| ATTATGTTATGTGCTCTTGT+AGG | + | chr6_3:98329087-98329106 | None:intergenic | 30.0% | |
| ! | TCTCGTTACTCTTTTTGAAT+AGG | + | chr6_3:98329272-98329291 | None:intergenic | 30.0% |
| CAAATATGTGTAGAAGAAAG+AGG | - | chr6_3:98329404-98329423 | Msa0968150:intron | 30.0% | |
| CTCCTATCACACTAATTTAT+CGG | - | chr6_3:98329494-98329513 | Msa0968150:CDS | 30.0% | |
| ! | TGTGATAAATTTTGCTGCAA+CGG | + | chr6_3:98329665-98329684 | None:intergenic | 30.0% |
| CCCAATGTTAAAATTGACAT+TGG | + | chr6_3:98329740-98329759 | None:intergenic | 30.0% | |
| ! | TTGTGATGATGTATCATGTA+TGG | + | chr6_3:98329814-98329833 | None:intergenic | 30.0% |
| !!! | GGTATTTTGACCATTATAGA+AGG | + | chr6_3:98330388-98330407 | None:intergenic | 30.0% |
| CTATAATGGTCAAAATACCA+TGG | - | chr6_3:98330389-98330408 | Msa0968150:intron | 30.0% | |
| TTAGATAAATTGGAGTGGTT+TGG | - | chr6_3:98330503-98330522 | Msa0968150:intron | 30.0% | |
| !!! | TTTTATTTTCCTCTTGTCGA+TGG | + | chr6_3:98330558-98330577 | None:intergenic | 30.0% |
| ! | ATTTACTGCTTCAGTTGTTT+TGG | - | chr6_3:98330613-98330632 | Msa0968150:five_prime_UTR | 30.0% |
| AAGCGGGTATAATAGGATTA+AGG | + | chr6_3:98326439-98326458 | None:intergenic | 35.0% | |
| !!! | TGTTGGTTTTGAGAATGAAG+CGG | + | chr6_3:98326456-98326475 | None:intergenic | 35.0% |
| !! | AAGAGTTCTGGTTAGTTTGT+TGG | + | chr6_3:98326473-98326492 | None:intergenic | 35.0% |
| ACTAACCAGAACTCTTCTTT+CGG | - | chr6_3:98326477-98326496 | Msa0968150:CDS | 35.0% | |
| !!! | AAGCGACCCATTTTAATTCA+TGG | - | chr6_3:98326679-98326698 | Msa0968150:intron | 35.0% |
| CTTGACGCCATGAATTAAAA+TGG | + | chr6_3:98326689-98326708 | None:intergenic | 35.0% | |
| TCTTCGGCAGCATTAAAAAA+TGG | + | chr6_3:98326734-98326753 | None:intergenic | 35.0% | |
| GAAGGATGGAATCTACATAT+AGG | - | chr6_3:98327053-98327072 | Msa0968150:intron | 35.0% | |
| TGGAATCTACATATAGGACA+TGG | - | chr6_3:98327059-98327078 | Msa0968150:intron | 35.0% | |
| AGAGATTTACTTACTACCCT+TGG | - | chr6_3:98327133-98327152 | Msa0968150:intron | 35.0% | |
| !!! | CTAGTGCTGATATTGGTTTT+TGG | - | chr6_3:98327606-98327625 | Msa0968150:intron | 35.0% |
| CCAAGAAATCCTGATAAACT+TGG | + | chr6_3:98327710-98327729 | None:intergenic | 35.0% | |
| CCAAGTTTATCAGGATTTCT+TGG | - | chr6_3:98327707-98327726 | Msa0968150:intron | 35.0% | |
| ! | GTTTTTCTCCTTTGCTTGAT+TGG | - | chr6_3:98328130-98328149 | Msa0968150:intron | 35.0% |
| !! | TTTTAATTACACGTCACACG+AGG | - | chr6_3:98328423-98328442 | Msa0968150:intron | 35.0% |
| AAGAAATAGGACACTAACCT+AGG | + | chr6_3:98328544-98328563 | None:intergenic | 35.0% | |
| !! | GTAAGGTGAAGTTGATAAAG+GGG | - | chr6_3:98328663-98328682 | Msa0968150:intron | 35.0% |
| ACATGCTAAACTAACAGCTT+TGG | + | chr6_3:98328768-98328787 | None:intergenic | 35.0% | |
| TTCTGCTCAGCTCTTATTAA+CGG | - | chr6_3:98328817-98328836 | Msa0968150:intron | 35.0% | |
| ATGCAAGATGAACACTAATG+GGG | - | chr6_3:98328847-98328866 | Msa0968150:intron | 35.0% | |
| !! | GTGTCCATAAGTTGATTAGA+TGG | + | chr6_3:98328888-98328907 | None:intergenic | 35.0% |
| TAACTCGCCCAAAAATGATA+AGG | - | chr6_3:98328910-98328929 | Msa0968150:intron | 35.0% | |
| CTCTTACACTGTTACACATT+TGG | - | chr6_3:98329372-98329391 | Msa0968150:intron | 35.0% | |
| TAAGAACTCATAAACCTGAG+AGG | + | chr6_3:98329474-98329493 | None:intergenic | 35.0% | |
| CTCCGATAAATTAGTGTGAT+AGG | + | chr6_3:98329499-98329518 | None:intergenic | 35.0% | |
| CTATCACACTAATTTATCGG+AGG | - | chr6_3:98329497-98329516 | Msa0968150:CDS | 35.0% | |
| GGTAGTTATGATGAAAGTAG+AGG | + | chr6_3:98330044-98330063 | None:intergenic | 35.0% | |
| CAGATGGAAAGATAATGTGA+AGG | + | chr6_3:98330150-98330169 | None:intergenic | 35.0% | |
| GTAAGTACATTAACACACTC+AGG | - | chr6_3:98330194-98330213 | Msa0968150:CDS | 35.0% | |
| ACAAAATAAGGTAACCGTGT+GGG | + | chr6_3:98330417-98330436 | None:intergenic | 35.0% | |
| AACAAAATAAGGTAACCGTG+TGG | + | chr6_3:98330418-98330437 | None:intergenic | 35.0% | |
| !!! | TCGATGGATATTGTTTTGGA+TGG | + | chr6_3:98330542-98330561 | None:intergenic | 35.0% |
| ! | CTTGTCGATGGATATTGTTT+TGG | + | chr6_3:98330546-98330565 | None:intergenic | 35.0% |
| AAACAATATCCATCGACAAG+AGG | - | chr6_3:98330546-98330565 | Msa0968150:CDS | 35.0% | |
| !!! | TGTTTTGGTTCTTCTTGTTG+TGG | - | chr6_3:98330628-98330647 | Msa0968150:five_prime_UTR | 35.0% |
| !!! | CCTTTTGGGATTCATAAACA+TGG | + | chr6_3:98330715-98330734 | None:intergenic | 35.0% |
| CCATGTTTATGAATCCCAAA+AGG | - | chr6_3:98330712-98330731 | Msa0968150:five_prime_UTR | 35.0% | |
| CACGGAAGGATTTCAATATT+GGG | + | chr6_3:98330884-98330903 | None:intergenic | 35.0% | |
| TCACGGAAGGATTTCAATAT+TGG | + | chr6_3:98330885-98330904 | None:intergenic | 35.0% | |
| GAGAATGAAGCGGGTATAAT+AGG | + | chr6_3:98326446-98326465 | None:intergenic | 40.0% | |
| !!! | GTTGGTTTTGAGAATGAAGC+GGG | + | chr6_3:98326455-98326474 | None:intergenic | 40.0% |
| TAGATCCGAAAGAAGAGTTC+TGG | + | chr6_3:98326485-98326504 | None:intergenic | 40.0% | |
| TGCAGATTCCTGAACTTCTT+CGG | + | chr6_3:98326750-98326769 | None:intergenic | 40.0% | |
| AAGTTCAGGAATCTGCAGAT+AGG | - | chr6_3:98326753-98326772 | Msa0968150:intron | 40.0% | |
| !!! | CATGCTGGAAGTATTTTTGG+TGG | + | chr6_3:98327092-98327111 | None:intergenic | 40.0% |
| !!! | CCACATGCTGGAAGTATTTT+TGG | + | chr6_3:98327095-98327114 | None:intergenic | 40.0% |
| CCAAAAATACTTCCAGCATG+TGG | - | chr6_3:98327092-98327111 | Msa0968150:intron | 40.0% | |
| AGGAATTTGAACGCGAAGTT+AGG | - | chr6_3:98327279-98327298 | Msa0968150:intron | 40.0% | |
| !! | TAGAAAGGCATCTCAGACAT+GGG | - | chr6_3:98327421-98327440 | Msa0968150:intron | 40.0% |
| !! | CGAGCTTGCTTTGTTTCTTT+CGG | - | chr6_3:98327469-98327488 | Msa0968150:intron | 40.0% |
| !! | GAGCTTGCTTTGTTTCTTTC+GGG | - | chr6_3:98327470-98327489 | Msa0968150:intron | 40.0% |
| ! | TTTGTTTCTTTCGGGAATGC+CGG | - | chr6_3:98327478-98327497 | Msa0968150:intron | 40.0% |
| AATTCAGTTGCATCTGGTGT+TGG | - | chr6_3:98327536-98327555 | Msa0968150:intron | 40.0% | |
| ATTCAGTTGCATCTGGTGTT+GGG | - | chr6_3:98327537-98327556 | Msa0968150:intron | 40.0% | |
| TGGTCCAAATCCAATGCATA+AGG | - | chr6_3:98327682-98327701 | Msa0968150:intron | 40.0% | |
| AAACTTGGCACCTTATGCAT+TGG | + | chr6_3:98327695-98327714 | None:intergenic | 40.0% | |
| ! | CATAAGGTGCCAAGTTTATC+AGG | - | chr6_3:98327698-98327717 | Msa0968150:intron | 40.0% |
| ! | TGATGGTGCACTAATTCCAA+TGG | - | chr6_3:98327811-98327830 | Msa0968150:intron | 40.0% |
| TTCCAATGGCTGAATTGAAC+AGG | - | chr6_3:98327825-98327844 | Msa0968150:intron | 40.0% | |
| TCCAATGGCTGAATTGAACA+GGG | - | chr6_3:98327826-98327845 | Msa0968150:intron | 40.0% | |
| ATCGTTGAAACTTCGTTGTG+TGG | - | chr6_3:98327881-98327900 | Msa0968150:intron | 40.0% | |
| AGCATTCATCAGAACTATCG+AGG | + | chr6_3:98328006-98328025 | None:intergenic | 40.0% | |
| TGCTATGACAAGCATCTCTA+TGG | - | chr6_3:98328022-98328041 | Msa0968150:intron | 40.0% | |
| ATGACAAGCATCTCTATGGA+TGG | - | chr6_3:98328026-98328045 | Msa0968150:intron | 40.0% | |
| CCTTTGCTTGATTGGTAAGT+CGG | - | chr6_3:98328138-98328157 | Msa0968150:intron | 40.0% | |
| GCAAGTAAATGCAAGTGTGT+CGG | + | chr6_3:98328186-98328205 | None:intergenic | 40.0% | |
| GCGACACTGCTAATGTAATA+AGG | + | chr6_3:98328263-98328282 | None:intergenic | 40.0% | |
| AGCATGGATGAATAGTGAGT+GGG | + | chr6_3:98328332-98328351 | None:intergenic | 40.0% | |
| AAGCATGGATGAATAGTGAG+TGG | + | chr6_3:98328333-98328352 | None:intergenic | 40.0% | |
| CAGAGAAGAGAAGACAGAAA+CGG | - | chr6_3:98329054-98329073 | Msa0968150:intron | 40.0% | |
| ! | CTTTTGAGCAACTTGAGAGA+CGG | + | chr6_3:98329451-98329470 | None:intergenic | 40.0% |
| CCGATCTAAAAACAACGATC+GGG | + | chr6_3:98329529-98329548 | None:intergenic | 40.0% | |
| !!! | CCCGATCGTTGTTTTTAGAT+CGG | - | chr6_3:98329526-98329545 | Msa0968150:CDS | 40.0% |
| CCCGATCTAAAAACAACGAT+CGG | + | chr6_3:98329530-98329549 | None:intergenic | 40.0% | |
| !!! | CCGATCGTTGTTTTTAGATC+GGG | - | chr6_3:98329527-98329546 | Msa0968150:CDS | 40.0% |
| TCAAAGGCTTAGTAACTTCG+AGG | - | chr6_3:98329574-98329593 | Msa0968150:CDS | 40.0% | |
| CAAAGGCTTAGTAACTTCGA+GGG | - | chr6_3:98329575-98329594 | Msa0968150:CDS | 40.0% | |
| CACAATTCGCAGTAGTGATA+TGG | - | chr6_3:98329681-98329700 | Msa0968150:CDS | 40.0% | |
| !! | TGGGATGCTCTAAGATTTCA+AGG | - | chr6_3:98329756-98329775 | Msa0968150:CDS | 40.0% |
| AACATGGGTTCTTGGAACTT+AGG | + | chr6_3:98329991-98330010 | None:intergenic | 40.0% | |
| TGAACAGAACCAAGGAACAT+GGG | + | chr6_3:98330006-98330025 | None:intergenic | 40.0% | |
| ATGAACAGAACCAAGGAACA+TGG | + | chr6_3:98330007-98330026 | None:intergenic | 40.0% | |
| GGATAGTATGAACAGAACCA+AGG | + | chr6_3:98330014-98330033 | None:intergenic | 40.0% | |
| ! | TGTTAGCAACTGGTTAGTTG+TGG | + | chr6_3:98330065-98330084 | None:intergenic | 40.0% |
| AGCTTGAAGATGTTAGCAAC+TGG | + | chr6_3:98330075-98330094 | None:intergenic | 40.0% | |
| GCTAACATCTTCAAGCTTAG+TGG | - | chr6_3:98330078-98330097 | Msa0968150:intron | 40.0% | |
| AAAATACCATGGTTCCCACA+CGG | - | chr6_3:98330400-98330419 | Msa0968150:intron | 40.0% | |
| !! | CTTGTTGTGGCGATTTTGAA+TGG | - | chr6_3:98330641-98330660 | Msa0968150:five_prime_UTR | 40.0% |
| TTTGAATGGCTATAGTGCTG+AGG | - | chr6_3:98330655-98330674 | Msa0968150:five_prime_UTR | 40.0% | |
| ! | TTGAATGGCTATAGTGCTGA+GGG | - | chr6_3:98330656-98330675 | Msa0968150:five_prime_UTR | 40.0% |
| !! | AGATCCTTATTAGGTTGAGG+AGG | + | chr6_3:98330833-98330852 | None:intergenic | 40.0% |
| ! | TGGAGATCCTTATTAGGTTG+AGG | + | chr6_3:98330836-98330855 | None:intergenic | 40.0% |
| !! | GTGGATTGGAGATCCTTATT+AGG | + | chr6_3:98330842-98330861 | None:intergenic | 40.0% |
| !! | ATTACCACTTTTAGCTGTGG+TGG | + | chr6_3:98330861-98330880 | None:intergenic | 40.0% |
| TCATGGCGTCAAGTCTTGAT+CGG | - | chr6_3:98326696-98326715 | Msa0968150:intron | 45.0% | |
| TAATGCTGCCGAAGAAGTTC+AGG | - | chr6_3:98326739-98326758 | Msa0968150:intron | 45.0% | |
| TTCATTAGGGTTCCACATGC+TGG | + | chr6_3:98327107-98327126 | None:intergenic | 45.0% | |
| TTGGTGGGATATGCAGTTAG+AGG | - | chr6_3:98327259-98327278 | Msa0968150:intron | 45.0% | |
| TTAGATGAAACGAACCCTCC+AGG | - | chr6_3:98327398-98327417 | Msa0968150:intron | 45.0% | |
| !! | GTAGAAAGGCATCTCAGACA+TGG | - | chr6_3:98327420-98327439 | Msa0968150:intron | 45.0% |
| ! | ATCTCAGACATGGGTGGTTT+TGG | - | chr6_3:98327430-98327449 | Msa0968150:intron | 45.0% |
| ! | TTCAGTTGCATCTGGTGTTG+GGG | - | chr6_3:98327538-98327557 | Msa0968150:intron | 45.0% |
| ! | ATCTGGTGTTGGGGAAGAAA+AGG | - | chr6_3:98327547-98327566 | Msa0968150:intron | 45.0% |
| !! | AAAAGGAGGAGGTATCACGT+GGG | - | chr6_3:98327564-98327583 | Msa0968150:intron | 45.0% |
| GGCACCTTATGCATTGGATT+TGG | + | chr6_3:98327689-98327708 | None:intergenic | 45.0% | |
| ATCAGGATTTCTTGGTTCCG+TGG | - | chr6_3:98327715-98327734 | Msa0968150:intron | 45.0% | |
| TTTCGAAATTGAAGTGGCCG+AGG | - | chr6_3:98327744-98327763 | Msa0968150:intron | 45.0% | |
| AAATTGAAGTGGCCGAGGAA+TGG | - | chr6_3:98327749-98327768 | Msa0968150:intron | 45.0% | |
| ACCCTGTTCAATTCAGCCAT+TGG | + | chr6_3:98327830-98327849 | None:intergenic | 45.0% | |
| AAGCATCTCTATGGATGGTG+TGG | - | chr6_3:98328031-98328050 | Msa0968150:intron | 45.0% | |
| CCGACTTACCAATCAAGCAA+AGG | + | chr6_3:98328141-98328160 | None:intergenic | 45.0% | |
| !! | TTGTAGCTTGCTGCAGCATT+AGG | - | chr6_3:98328486-98328505 | Msa0968150:intron | 45.0% |
| AAGTTGCTCAAAAGCCTCTC+AGG | - | chr6_3:98329457-98329476 | Msa0968150:intron | 45.0% | |
| GAGGGCGGAAAATATGAAGT+GGG | - | chr6_3:98329593-98329612 | Msa0968150:CDS | 45.0% | |
| TCATGTATGGACTCTGAACC+AGG | + | chr6_3:98329801-98329820 | None:intergenic | 45.0% | |
| TTCCAAGAACCCATGTTCCT+TGG | - | chr6_3:98329994-98330013 | Msa0968150:CDS | 45.0% | |
| AACCAAGGAACATGGGTTCT+TGG | + | chr6_3:98329999-98330018 | None:intergenic | 45.0% | |
| GATGAAAGTAGAGGTCATGC+TGG | + | chr6_3:98330035-98330054 | None:intergenic | 45.0% | |
| GAAGGATAAGAGTGACGTGT+GGG | + | chr6_3:98330132-98330151 | None:intergenic | 45.0% | |
| TGAAGGATAAGAGTGACGTG+TGG | + | chr6_3:98330133-98330152 | None:intergenic | 45.0% | |
| TTATGCCACAACGAACAACC+TGG | + | chr6_3:98330758-98330777 | None:intergenic | 45.0% | |
| CTGTCCTCCTCAACCTAATA+AGG | - | chr6_3:98330826-98330845 | Msa0968150:five_prime_UTR | 45.0% | |
| !!! | CACTTTTAGCTGTGGTGGAT+TGG | + | chr6_3:98330856-98330875 | None:intergenic | 45.0% |
| CAATCCACCACAGCTAAAAG+TGG | - | chr6_3:98330854-98330873 | Msa0968150:five_prime_UTR | 45.0% | |
| !! | GGGATTACCACTTTTAGCTG+TGG | + | chr6_3:98330864-98330883 | None:intergenic | 45.0% |
| !!! | TTTTATTTTTTATTGAAAAA+AGG | - | chr6_3:98327946-98327965 | Msa0968150:intron | 5.0% |
| !!! | TTTATTTTTTATTGAAAAAA+GGG | - | chr6_3:98327947-98327966 | Msa0968150:intron | 5.0% |
| !!! | AAAATATTTTTAACAAAATA+AGG | + | chr6_3:98330429-98330448 | None:intergenic | 5.0% |
| CTACCCTTGGCACTGCTAAA+TGG | - | chr6_3:98327146-98327165 | Msa0968150:intron | 50.0% | |
| ! | CTGCCATTTAGCAGTGCCAA+GGG | + | chr6_3:98327152-98327171 | None:intergenic | 50.0% |
| TGGGCGATGATGCAAGAACT+AGG | - | chr6_3:98327321-98327340 | Msa0968150:intron | 50.0% | |
| AACGAACCCTCCAGGTAGAA+AGG | - | chr6_3:98327406-98327425 | Msa0968150:intron | 50.0% | |
| GAGATGCCTTTCTACCTGGA+GGG | + | chr6_3:98327415-98327434 | None:intergenic | 50.0% | |
| TGAGATGCCTTTCTACCTGG+AGG | + | chr6_3:98327416-98327435 | None:intergenic | 50.0% | |
| ! | GTCTGAGATGCCTTTCTACC+TGG | + | chr6_3:98327419-98327438 | None:intergenic | 50.0% |
| !! | AAAGGCATCTCAGACATGGG+TGG | - | chr6_3:98327424-98327443 | Msa0968150:intron | 50.0% |
| !!! | ACATGGGTGGTTTTGGACGA+AGG | - | chr6_3:98327437-98327456 | Msa0968150:intron | 50.0% |
| ! | TGGTGTTGGGGAAGAAAAGG+AGG | - | chr6_3:98327550-98327569 | Msa0968150:intron | 50.0% |
| TGTTGGGGAAGAAAAGGAGG+AGG | - | chr6_3:98327553-98327572 | Msa0968150:intron | 50.0% | |
| !! | GAAAAGGAGGAGGTATCACG+TGG | - | chr6_3:98327563-98327582 | Msa0968150:intron | 50.0% |
| !! | GCTAGCGCTAGTGCTGATAT+TGG | - | chr6_3:98327599-98327618 | Msa0968150:intron | 50.0% |
| ATTTGGACCAGAAGAACCGC+TGG | + | chr6_3:98327672-98327691 | None:intergenic | 50.0% | |
| CAGGCCGACTGTATTGCATT+TGG | + | chr6_3:98328090-98328109 | None:intergenic | 50.0% | |
| CAGTGTCGCCGTTATCTCAA+AGG | - | chr6_3:98328274-98328293 | Msa0968150:intron | 50.0% | |
| TACACGTCACACGAGGTAGA+AGG | - | chr6_3:98328430-98328449 | Msa0968150:intron | 50.0% | |
| AGGCTTAGTAACTTCGAGGG+CGG | - | chr6_3:98329578-98329597 | Msa0968150:CDS | 50.0% | |
| CGAGGGCGGAAAATATGAAG+TGG | - | chr6_3:98329592-98329611 | Msa0968150:CDS | 50.0% | |
| CACAACGAACAACCTGGCAT+CGG | + | chr6_3:98330752-98330771 | None:intergenic | 50.0% | |
| TTTCCTGACGATTGTCCTCC+AGG | - | chr6_3:98330791-98330810 | Msa0968150:five_prime_UTR | 50.0% | |
| TGGCGTCAAGTCTTGATCGG+TGG | - | chr6_3:98326699-98326718 | Msa0968150:intron | 55.0% | |
| GGCGTCAAGTCTTGATCGGT+GGG | - | chr6_3:98326700-98326719 | Msa0968150:intron | 55.0% | |
| ! | CCTGCCATTTAGCAGTGCCA+AGG | + | chr6_3:98327153-98327172 | None:intergenic | 55.0% |
| CCTTGGCACTGCTAAATGGC+AGG | - | chr6_3:98327150-98327169 | Msa0968150:intron | 55.0% | |
| !! | GGGTTGTTGCTTTCAGCTGC+CGG | + | chr6_3:98327500-98327519 | None:intergenic | 55.0% |
| ! | AGGTATCACGTGGGCATCGT+AGG | - | chr6_3:98327573-98327592 | Msa0968150:intron | 55.0% |
| ! | GGTATCACGTGGGCATCGTA+GGG | - | chr6_3:98327574-98327593 | Msa0968150:intron | 55.0% |
| CTGGAGGAACTAGACTGCTG+CGG | + | chr6_3:98327653-98327672 | None:intergenic | 55.0% | |
| ! | CAGCAGTCTAGTTCCTCCAG+CGG | - | chr6_3:98327653-98327672 | Msa0968150:intron | 55.0% |
| AGTTCCTCCAGCGGTTCTTC+TGG | - | chr6_3:98327662-98327681 | Msa0968150:intron | 55.0% | |
| AGGTAACCGTGTGGGAACCA+TGG | + | chr6_3:98330409-98330428 | None:intergenic | 55.0% | |
| ! | AACGAACAACCTGGCATCGG+CGG | + | chr6_3:98330749-98330768 | None:intergenic | 55.0% |
| CGATGCCAGGTTGTTCGTTG+TGG | - | chr6_3:98330750-98330769 | Msa0968150:five_prime_UTR | 55.0% | |
| TAGCCTGGAGGACAATCGTC+AGG | + | chr6_3:98330797-98330816 | None:intergenic | 55.0% | |
| ! | GTTGAGGAGGACAGTGCTGA+TGG | + | chr6_3:98330820-98330839 | None:intergenic | 55.0% |
| TGGACCAGAAGAACCGCTGG+AGG | + | chr6_3:98327669-98327688 | None:intergenic | 60.0% | |
| ! | GGCTATAGTGCTGAGGGTGC+AGG | - | chr6_3:98330662-98330681 | Msa0968150:five_prime_UTR | 60.0% |
| ! | AGTGCTGAGGGTGCAGGAAG+AGG | - | chr6_3:98330668-98330687 | Msa0968150:five_prime_UTR | 60.0% |
| ! | CGGCGGCGAGAACACCTTTT+GGG | + | chr6_3:98330729-98330748 | None:intergenic | 60.0% |
| !! | CAGTGCTGATGGTAGCCTGG+AGG | + | chr6_3:98330809-98330828 | None:intergenic | 60.0% |
| !! | GGACAGTGCTGATGGTAGCC+TGG | + | chr6_3:98330812-98330831 | None:intergenic | 60.0% |
| ! | GCGGCGGCGAGAACACCTTT+TGG | + | chr6_3:98330730-98330749 | None:intergenic | 65.0% |
| !! | GAACAACCTGGCATCGGCGG+CGG | + | chr6_3:98330746-98330765 | None:intergenic | 65.0% |
| TTCTCGCCGCCGCCGATGCC+AGG | - | chr6_3:98330737-98330756 | Msa0968150:five_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 98326402 | 98330904 | 98326402 | ID=Msa0968150;Name=Msa0968150 |
| chr6_3 | mRNA | 98326402 | 98330904 | 98326402 | ID=Msa0968150-mRNA-1;Parent=Msa0968150;Name=Msa0968150-mRNA-1;_AED=0.25;_eAED=0.25;_QI=296|0.75|0.8|1|1|1|5|0|408 |
| chr6_3 | exon | 98326402 | 98326679 | 98326402 | ID=Msa0968150-mRNA-1:exon:18453;Parent=Msa0968150-mRNA-1 |
| chr6_3 | exon | 98329155 | 98329338 | 98329155 | ID=Msa0968150-mRNA-1:exon:18452;Parent=Msa0968150-mRNA-1 |
| chr6_3 | exon | 98329459 | 98330031 | 98329459 | ID=Msa0968150-mRNA-1:exon:18451;Parent=Msa0968150-mRNA-1 |
| chr6_3 | exon | 98330135 | 98330249 | 98330135 | ID=Msa0968150-mRNA-1:exon:18450;Parent=Msa0968150-mRNA-1 |
| chr6_3 | exon | 98330532 | 98330904 | 98330532 | ID=Msa0968150-mRNA-1:exon:18449;Parent=Msa0968150-mRNA-1 |
| chr6_3 | five_prime_UTR | 98330609 | 98330904 | 98330609 | ID=Msa0968150-mRNA-1:five_prime_utr;Parent=Msa0968150-mRNA-1 |
| chr6_3 | CDS | 98330532 | 98330608 | 98330532 | ID=Msa0968150-mRNA-1:cds;Parent=Msa0968150-mRNA-1 |
| chr6_3 | CDS | 98330135 | 98330249 | 98330135 | ID=Msa0968150-mRNA-1:cds;Parent=Msa0968150-mRNA-1 |
| chr6_3 | CDS | 98329459 | 98330031 | 98329459 | ID=Msa0968150-mRNA-1:cds;Parent=Msa0968150-mRNA-1 |
| chr6_3 | CDS | 98329155 | 98329338 | 98329155 | ID=Msa0968150-mRNA-1:cds;Parent=Msa0968150-mRNA-1 |
| chr6_3 | CDS | 98326402 | 98326679 | 98326402 | ID=Msa0968150-mRNA-1:cds;Parent=Msa0968150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
