AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0076700


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0076700 MtrunA17_Chr1g0185771 92.405 553 32 3 1 544 1 552 0.0 911
Msa0076700 MtrunA17_Chr2g0306241 60.465 344 36 3 527 770 2 345 4.61e-127 390
Msa0076700 MtrunA17_Chr6g0475571 66.447 304 23 3 546 770 146 449 9.51e-126 392
Msa0076700 MtrunA17_Chr1g0175041 63.385 325 19 3 546 770 522 846 2.48e-123 390
Msa0076700 MtrunA17_Chr3g0096731 63.077 325 20 3 546 770 268 592 5.54e-123 382
Msa0076700 MtrunA17_Chr6g0478941 63.385 325 19 3 546 770 132 456 1.44e-121 387
Msa0076700 MtrunA17_Chr1g0170491 63.692 325 18 3 546 770 507 831 5.06e-121 390
Msa0076700 MtrunA17_Chr6g0452431 63.385 325 19 3 546 770 429 753 5.67e-121 389
Msa0076700 MtrunA17_Chr2g0306051 62.883 326 20 3 546 770 474 799 6.71e-121 387
Msa0076700 MtrunA17_Chr3g0105561 62.769 325 21 3 546 770 98 422 5.36e-120 386
Msa0076700 MtrunA17_Chr8g0367821 62.300 313 18 3 546 758 132 444 9.82e-120 367
Msa0076700 MtrunA17_Chr0c01g0489031 63.077 325 20 3 546 770 507 831 1.45e-119 382
Msa0076700 MtrunA17_Chr2g0306271 62.462 325 22 3 546 770 507 831 7.15e-119 379
Msa0076700 MtrunA17_Chr4g0044301 63.692 325 18 3 546 770 507 831 8.31e-119 390
Msa0076700 MtrunA17_Chr8g0363431 63.385 325 19 3 546 770 549 873 2.90e-118 388
Msa0076700 MtrunA17_Chr4g0018081 63.551 321 17 3 550 770 409 729 3.19e-118 382
Msa0076700 MtrunA17_Chr1g0170501 61.846 325 24 3 546 770 323 647 3.39e-118 375
Msa0076700 MtrunA17_Chr4g0053141 63.385 325 19 3 546 770 507 831 4.21e-118 388
Msa0076700 MtrunA17_Chr1g0172201 61.231 325 26 3 546 770 46 370 6.59e-118 375
Msa0076700 MtrunA17_Chr2g0306511 62.462 325 22 3 546 770 507 831 8.03e-118 384
Msa0076700 MtrunA17_Chr4g0019441 62.462 325 22 3 546 770 483 807 4.60e-117 385
Msa0076700 MtrunA17_Chr2g0306251 62.154 325 23 3 546 770 366 690 8.24e-116 380
Msa0076700 MtrunA17_Chr5g0422121 57.282 309 48 4 546 770 497 805 3.23e-100 338
Msa0076700 MtrunA17_Chr2g0313291 58.824 221 27 2 614 770 10 230 7.97e-78 251
Msa0076700 MtrunA17_Chr7g0231051 68.571 140 8 1 546 649 535 674 9.36e-50 186
Msa0076700 MtrunA17_Chr4g0041691 30.457 394 177 8 464 770 525 908 2.26e-45 176
Msa0076700 MtrunA17_Chr3g0096001 33.846 325 115 3 546 770 452 776 2.55e-44 172
Msa0076700 MtrunA17_Chr6g0470931 73.404 94 25 0 669 762 39 132 1.38e-42 151
Msa0076700 MtrunA17_Chr6g0472401 31.385 325 122 4 546 770 100 423 1.26e-40 161
Msa0076700 MtrunA17_Chr3g0084281 35.052 291 88 4 540 730 553 842 5.73e-39 155
Msa0076700 MtrunA17_Chr4g0020701 88.158 76 8 1 546 620 486 561 1.07e-34 139
Msa0076700 MtrunA17_Chr4g0027911 80.952 84 13 1 546 629 268 348 1.14e-34 142
Msa0076700 MtrunA17_Chr2g0313281 89.855 69 7 0 546 614 433 501 2.45e-34 138
Msa0076700 MtrunA17_Chr8g0358641 61.607 112 7 1 549 624 509 620 2.34e-30 127
Msa0076700 MtrunA17_Chr1g0158081 24.100 361 168 8 510 766 693 1051 2.24e-16 84.3
Msa0076700 MtrunA17_Chr7g0226861 47.059 68 36 0 546 613 559 626 7.89e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0076700 AT4G02880.2 60.733 191 70 1 354 544 263 448 3.51e-60 213
Msa0076700 AT4G02880.2 39.623 106 61 2 1 104 1 105 9.15e-13 72.0
Msa0076700 AT1G03290.6 65.517 174 60 0 371 544 231 404 3.96e-60 212
Msa0076700 AT1G03290.6 71.698 53 15 0 1 53 1 53 1.07e-16 84.3
Msa0076700 AT4G02880.1 60.733 191 70 1 354 544 259 444 4.07e-60 213
Msa0076700 AT4G02880.1 55.357 56 25 0 1 56 1 56 1.90e-12 71.2
Msa0076700 AT1G03290.5 65.517 174 60 0 371 544 253 426 6.09e-60 212
Msa0076700 AT1G03290.5 71.698 53 15 0 1 53 1 53 1.22e-16 84.3
Msa0076700 AT1G03290.3 65.517 174 60 0 371 544 283 456 9.75e-60 212
Msa0076700 AT1G03290.3 71.698 53 15 0 1 53 1 53 1.54e-16 84.3
Msa0076700 AT1G03290.2 65.517 174 60 0 371 544 283 456 9.75e-60 212
Msa0076700 AT1G03290.2 71.698 53 15 0 1 53 1 53 1.54e-16 84.3
Msa0076700 AT1G03290.4 65.517 174 60 0 371 544 283 456 9.75e-60 212
Msa0076700 AT1G03290.4 71.698 53 15 0 1 53 1 53 1.54e-16 84.3
Msa0076700 AT1G03290.1 65.517 174 60 0 371 544 283 456 9.75e-60 212
Msa0076700 AT1G03290.1 71.698 53 15 0 1 53 1 53 1.54e-16 84.3
Msa0076700 ATMG00860.1 43.956 91 50 1 671 761 43 132 1.55e-19 86.7
Msa0076700 AT5G64980.1 63.043 46 17 0 1 46 1 46 3.83e-12 68.9
Msa0076700 AT5G64980.2 63.043 46 17 0 1 46 1 46 3.83e-12 68.9

Find 174 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCATGCTGGGGAAATTTA+TGG 0.158311 1_2:+52981294 Msa0076700:intron
TGAAGATGAAGGGGAGATTT+TGG 0.214160 1_2:+52979743 Msa0076700:CDS
AGGAGTCATCAAATGGATTT+TGG 0.236134 1_2:+52980294 Msa0076700:CDS
GGATGTCATTGTTGAAAATT+TGG 0.236630 1_2:+52980355 Msa0076700:CDS
ATATTGTGATGTGTCTAAAT+TGG 0.275730 1_2:+52983072 Msa0076700:CDS
GGTTTCGGCAAAATCAAAAT+TGG 0.278558 1_2:-52983031 None:intergenic
TCCGGTGGTCGCTGCTATAT+TGG 0.280747 1_2:-52981088 None:intergenic
GTTGAAAATTTGGCATCTTC+AGG 0.284090 1_2:+52980365 Msa0076700:CDS
TGCCTGTATAGGTGGATTCC+AGG 0.290736 1_2:+52979455 Msa0076700:intron
TCAAACAGTGTCTCAAGTTC+AGG 0.292873 1_2:+52980598 Msa0076700:CDS
TTACACGTCAACTGCGTTAA+CGG 0.315601 1_2:-52982935 None:intergenic
TTATGGCGAAAAGGCAATTC+TGG 0.316460 1_2:+52981311 Msa0076700:CDS
ATCGATACAGGCTTCGTTCC+CGG 0.320921 1_2:-52982166 None:intergenic
GTTATTATTTCCAGACTCAT+AGG 0.323264 1_2:+52978136 None:intergenic
TCATAAGCTTGTTAAAAGTA+TGG 0.338734 1_2:+52979770 Msa0076700:CDS
GAGGGTTTGATATTCTAGAT+AGG 0.355256 1_2:+52981109 Msa0076700:CDS
TACTGCAGGCTGGATTATAT+TGG 0.370799 1_2:-52980709 None:intergenic
ATATGGACATTATGAATATA+AGG 0.375845 1_2:+52982519 Msa0076700:CDS
ACACTCGAAGGATGCTGATA+TGG 0.376751 1_2:+52979501 Msa0076700:CDS
CTAACTTCAGTAACTGACTT+TGG 0.384260 1_2:-52982848 None:intergenic
TACTATCGAAGGTTTATAGA+AGG 0.384450 1_2:+52982893 Msa0076700:CDS
AAGACCAAGTGTTTCACCTT+GGG 0.389941 1_2:+52982267 Msa0076700:CDS
GTTACTGTAACATTCAGATC+TGG 0.391606 1_2:-52979861 None:intergenic
TCACGTCTGTCCAGCTTGTC+TGG 0.392930 1_2:+52981357 Msa0076700:CDS
TTCTTCACATTATGTACATC+GGG 0.399469 1_2:+52979806 Msa0076700:CDS
CGATAAGGTGTCATCGATAC+AGG 0.401208 1_2:-52982178 None:intergenic
AAATCTGCCAGCTCTTCTTC+TGG 0.403009 1_2:+52979837 Msa0076700:CDS
GATACCGCATCAACTTTAGA+TGG 0.403409 1_2:-52982812 None:intergenic
GTAGCATTTATAAACCTTGA+AGG 0.403669 1_2:+52979906 Msa0076700:CDS
TAAAAGTAGACTCACCTTCC+AGG 0.411888 1_2:-52979621 None:intergenic
TCAAGGTTTATAAATGCTAC+AGG 0.412424 1_2:-52979903 None:intergenic
ATGAAACCAGTCAATTGCTT+GGG 0.419864 1_2:+52980222 Msa0076700:CDS
GATGAGAGAGGTGGAACATC+AGG 0.426615 1_2:+52981047 Msa0076700:CDS
ACAAAAGGTTCATCAGGTTT+CGG 0.427755 1_2:-52983046 None:intergenic
ACGCAATTTCCCTATGAGTC+TGG 0.428884 1_2:-52978146 None:intergenic
TTCCAGGTTGTTGAGGGCAG+TGG 0.430937 1_2:+52979471 Msa0076700:CDS
CCCTAGAGTCATAGTGAACC+TGG 0.434969 1_2:+52979603 Msa0076700:CDS
TTGGGGAGCGCCGGTATTGT+TGG 0.435378 1_2:+52982285 Msa0076700:CDS
AAGAATATGATTATATAAGT+AGG 0.439675 1_2:-52978248 None:intergenic
TACTTCCAGCATCCCCTTCA+CGG 0.443418 1_2:+52979572 Msa0076700:CDS
CCAGGTTCACTATGACTCTA+GGG 0.446067 1_2:-52979603 None:intergenic
GCATCATAATCTTCAGCCTT+AGG 0.448094 1_2:-52980503 None:intergenic
AAAATCCATTTGATGACTCC+TGG 0.449156 1_2:-52980292 None:intergenic
AGCAAGATTGACTTGAGGTT+CGG 0.449260 1_2:+52982439 Msa0076700:intron
TATACCACAAAAGGTTCATC+AGG 0.450180 1_2:-52983052 None:intergenic
TCAGGAGAAACTTGCAGAGC+AGG 0.457789 1_2:+52981065 Msa0076700:CDS
GGTGGATTCCAGGTTGTTGA+GGG 0.458095 1_2:+52979465 Msa0076700:intron
GAAAGTGAAAGTGAAGATGA+AGG 0.459096 1_2:+52979732 Msa0076700:CDS
ATTTCCCAGGAGTCATCAAA+TGG 0.460582 1_2:+52980287 Msa0076700:CDS
GTCCAGCTTGTCTGGTGAAA+GGG 0.461081 1_2:+52981365 Msa0076700:CDS
GGCTGCGGAAGTTGTTCTTA+CGG 0.467393 1_2:+52979522 Msa0076700:CDS
ATCCCTTTCACCAGACAAGC+TGG 0.471279 1_2:-52981367 None:intergenic
TCCATTGCCATTGTTAGTCA+TGG 0.473377 1_2:-52980441 None:intergenic
TGTCCAGCTTGTCTGGTGAA+AGG 0.474114 1_2:+52981364 Msa0076700:CDS
TGCCGATTCTTCTTGTGGAC+TGG 0.474130 1_2:+52980145 Msa0076700:CDS
ATCCAGTCCACAAGAAGAAT+CGG 0.478136 1_2:-52980147 None:intergenic
TTAACGCAGTTGACGTGTAA+AGG 0.481737 1_2:+52982938 Msa0076700:CDS
CTGCGATACAAGTCACGGAT+TGG 0.483106 1_2:+52980532 Msa0076700:CDS
TATTGTGATGTGTCTAAATT+GGG 0.485653 1_2:+52983073 Msa0076700:CDS
AGAATATGATTATATAAGTA+GGG 0.487469 1_2:-52978247 None:intergenic
GGTTTCATCATTTAGCTCAC+TGG 0.490778 1_2:-52980207 None:intergenic
TCTAGAACAAGAAGCAATGA+TGG 0.490819 1_2:+52981710 Msa0076700:CDS
CTAATCGAGATTCAAGACTT+TGG 0.492088 1_2:-52981614 None:intergenic
ACATCACAATATACCACAAA+AGG 0.492479 1_2:-52983061 None:intergenic
TACGTCAAATCGTCTCATCA+TGG 0.495561 1_2:+52978465 Msa0076700:exon
TCCAGGTTCACTATGACTCT+AGG 0.497671 1_2:-52979604 None:intergenic
GATGAAACCAGTCAATTGCT+TGG 0.498096 1_2:+52980221 Msa0076700:CDS
TTCTTCTTAACCAACAATAC+CGG 0.498708 1_2:-52982295 None:intergenic
AGAAAGTGAACAAACCTTCA+AGG 0.498899 1_2:-52979920 None:intergenic
ATCTGGGCCAGAAGAAGAGC+TGG 0.501030 1_2:-52979844 None:intergenic
AATGATGGAGAAGGTAGTAC+AGG 0.501842 1_2:+52981725 Msa0076700:CDS
GAAGTGTCTGCCGCCGGAGA+GGG 0.504994 1_2:+52982117 Msa0076700:intron
TGGGTCGTCTTCATCATCAT+TGG 0.505413 1_2:+52980085 Msa0076700:CDS
AAAGCGAGGATGAAGGGAAA+AGG 0.505775 1_2:+52980027 Msa0076700:CDS
GAAAATTCAACCTCCCTCTC+CGG 0.506382 1_2:-52982130 None:intergenic
AAAGCTGCCGATTCTTCTTG+TGG 0.507371 1_2:+52980140 Msa0076700:CDS
ATTTACCCCAAGCAATTGAC+TGG 0.507418 1_2:-52980228 None:intergenic
CCAACATCAGTATCTTCAAC+AGG 0.508842 1_2:-52980065 None:intergenic
CCTAAAATAGAATTAAGAAC+GGG 0.510453 1_2:-52978292 None:intergenic
TCAGATGAAAGCGAGGATGA+AGG 0.511685 1_2:+52980020 Msa0076700:intron
AAAGTGAAAGTGAAGATGAA+GGG 0.512917 1_2:+52979733 Msa0076700:CDS
ACTTCCAGCATCCCCTTCAC+GGG 0.513246 1_2:+52979573 Msa0076700:CDS
GTATCCCGTGAAGGGGATGC+TGG 0.514200 1_2:-52979577 None:intergenic
AGGTGGATTCCAGGTTGTTG+AGG 0.514430 1_2:+52979464 Msa0076700:intron
CTTCTTCACATTATGTACAT+CGG 0.516869 1_2:+52979805 Msa0076700:CDS
TTGTTGGTTAAGAAGAAAGA+TGG 0.517031 1_2:+52982301 Msa0076700:CDS
GCCAATATAGCAGCGACCAC+CGG 0.517149 1_2:+52981087 Msa0076700:CDS
GCAGCTTTGATGATTTGTAC+AGG 0.517673 1_2:-52980125 None:intergenic
AGGGTTTGATATTCTAGATA+GGG 0.517722 1_2:+52981110 Msa0076700:CDS
AGAGTCTTCTGACTCGATCA+AGG 0.518967 1_2:-52980570 None:intergenic
GTGTCTGCCGCCGGAGAGGG+AGG 0.519920 1_2:+52982120 Msa0076700:intron
TGGGGAAATTTATGGCGAAA+AGG 0.520761 1_2:+52981302 Msa0076700:CDS
TGTTTCACCTTGGGGAGCGC+CGG 0.520848 1_2:+52982276 Msa0076700:CDS
CAAACAGTGTCTCAAGTTCA+GGG 0.526735 1_2:+52980599 Msa0076700:CDS
TTATTATTTCCAGACTCATA+GGG 0.528143 1_2:+52978137 None:intergenic
CAGATGAAAGCGAGGATGAA+GGG 0.528971 1_2:+52980021 Msa0076700:intron
AGCATATCAATACTGCAGGC+TGG 0.534938 1_2:-52980719 None:intergenic
TTGCTTGGGGTAAATAATGA+TGG 0.536969 1_2:+52980236 Msa0076700:CDS
AGCCACTGCCCTCAACAACC+TGG 0.540659 1_2:-52979473 None:intergenic
TAAGACCAAGTGTTTCACCT+TGG 0.542984 1_2:+52982266 Msa0076700:CDS
CTTGTTAAAAGTATGGATGT+TGG 0.543919 1_2:+52979777 Msa0076700:CDS
TAGGGTTTGTATCCCGTGAA+GGG 0.545390 1_2:-52979585 None:intergenic
CTCAAGCATATCAATACTGC+AGG 0.545954 1_2:-52980723 None:intergenic
TTACTGTAACATTCAGATCT+GGG 0.548270 1_2:-52979860 None:intergenic
TCCATGACTAACAATGGCAA+TGG 0.550339 1_2:+52980440 Msa0076700:CDS
AGAAGAAAGATGGTAGTATG+AGG 0.551035 1_2:+52982311 Msa0076700:CDS
AAATCCATTTGATGACTCCT+GGG 0.552827 1_2:-52980291 None:intergenic
CGCGTGCAACAATTAACACT+AGG 0.557347 1_2:+52978180 Msa0076700:five_prime_UTR
ATCTAGAATATCAAACCCTC+CGG 0.557961 1_2:-52981106 None:intergenic
TTCTTTAGCGTGCACCAACA+TGG 0.558785 1_2:-52981148 None:intergenic
GGCTGAGTTGAAGAAACAGT+TGG 0.559250 1_2:+52982219 Msa0076700:CDS
CAAACAATCTGAATGAAGAG+TGG 0.561365 1_2:+52980468 Msa0076700:CDS
GGAAGCTGAAGAGAATTCAA+AGG 0.561722 1_2:+52981767 Msa0076700:CDS
CTCTAGTAGTGGTATTGCAG+TGG 0.562177 1_2:+52982787 Msa0076700:intron
TTTCTTCAACTCAGCCAACT+CGG 0.562291 1_2:-52982212 None:intergenic
TGATGTGTCTAAATTGGGCT+AGG 0.563515 1_2:+52983078 Msa0076700:CDS
ACGTCAAATCGTCTCATCAT+GGG 0.564406 1_2:+52978466 Msa0076700:exon
GTTTGGCAGGTTACTATCGA+AGG 0.566767 1_2:+52982882 Msa0076700:CDS
AATTCTGGCGACTGAGCTGA+AGG 0.568587 1_2:+52981326 Msa0076700:CDS
AAACAATCTGAATGAAGAGT+GGG 0.568659 1_2:+52980469 Msa0076700:CDS
TATCTCTAGTGAAATTTCCC+AGG 0.568889 1_2:+52980274 Msa0076700:CDS
AGATGAAGATATGCAGAAGA+CGG 0.568974 1_2:+52982483 Msa0076700:CDS
CAAGGTTTATAAATGCTACA+GGG 0.573009 1_2:-52979902 None:intergenic
ATTGATGAGAATACGACTCT+AGG 0.573030 1_2:+52980686 Msa0076700:CDS
TTCAGGTGTATATCACGTGT+TGG 0.574166 1_2:+52980382 Msa0076700:CDS
ACAAGAAGCAATGATGGAGA+AGG 0.575425 1_2:+52981716 Msa0076700:CDS
ACAGATAAATGTTGCAGAGG+AGG 0.575696 1_2:+52980412 Msa0076700:CDS
AAGTGAAAGTGAAGATGAAG+GGG 0.577481 1_2:+52979734 Msa0076700:CDS
AGTTGATGCGGTATCACGAT+GGG 0.580665 1_2:+52982820 Msa0076700:CDS
AACAATACCGGCGCTCCCCA+AGG 0.581284 1_2:-52982283 None:intergenic
CTAGGGTTTGTATCCCGTGA+AGG 0.582518 1_2:-52979586 None:intergenic
TCGGAAGCTGACATACGATA+AGG 0.582759 1_2:-52982193 None:intergenic
GTCTCTTGCAATTCTTGATG+AGG 0.585007 1_2:+52981392 Msa0076700:CDS
ACCTAAAATAGAATTAAGAA+CGG 0.588624 1_2:-52978293 None:intergenic
AGCAGAAATGTTGAGGAAAG+CGG 0.595016 1_2:+52981641 Msa0076700:CDS
CGCTAAAGAAGCAAATGACA+TGG 0.595563 1_2:+52981161 Msa0076700:CDS
TCGTATGTCAGCTTCCGAGT+TGG 0.599897 1_2:+52982198 Msa0076700:CDS
CTGTTGAAGATACTGATGTT+GGG 0.601353 1_2:+52980066 Msa0076700:CDS
CCTGTTGAAGATACTGATGT+TGG 0.601909 1_2:+52980065 Msa0076700:CDS
AGATTCCATTGATGAAAACA+AGG 0.603118 1_2:-52981013 None:intergenic
GCTCCCCAAGGTGAAACACT+TGG 0.603144 1_2:-52982271 None:intergenic
TGAGTTGAAGAAACAGTTGG+AGG 0.605829 1_2:+52982222 Msa0076700:CDS
CGAGGATGAAGGGAAAAGGT+TGG 0.606782 1_2:+52980031 Msa0076700:CDS
GAAGGATGCTGATATGGCTG+CGG 0.608075 1_2:+52979507 Msa0076700:CDS
ATTGAAGAAGCGTTTGACGA+CGG 0.608751 1_2:+52983006 Msa0076700:CDS
AATATAGCAGCGACCACCGG+AGG 0.613783 1_2:+52981090 Msa0076700:CDS
GGAAGTGTCTGCCGCCGGAG+AGG 0.615297 1_2:+52982116 Msa0076700:intron
AGATGAGTATCAAGCCATGT+TGG 0.617399 1_2:+52981134 Msa0076700:CDS
AGGGTTTGTATCCCGTGAAG+GGG 0.617974 1_2:-52979584 None:intergenic
TATCAACTTGATGAGAGAGG+TGG 0.618003 1_2:+52981038 Msa0076700:CDS
GGAATCACGGAGACTACAGC+AGG 0.619130 1_2:+52981746 Msa0076700:CDS
AAGTGCTGAAAGAGAAGAAG+CGG 0.619261 1_2:+52982703 Msa0076700:CDS
TAGCTGCAGCAGAAATGTTG+AGG 0.619883 1_2:+52981634 Msa0076700:CDS
TAGAATATCAAACCCTCCGG+TGG 0.620228 1_2:-52981103 None:intergenic
CTGCAGTATTGATATGCTTG+AGG 0.622883 1_2:+52980724 Msa0076700:CDS
AGACCAAGTGTTTCACCTTG+GGG 0.624119 1_2:+52982268 Msa0076700:CDS
GCTACTTCCATGACTAACAA+TGG 0.625453 1_2:+52980434 Msa0076700:CDS
AGAAGGTAGTACAGGAATCA+CGG 0.625668 1_2:+52981733 Msa0076700:CDS
TGTATATCACGTGTTGGAGA+CGG 0.626009 1_2:+52980388 Msa0076700:CDS
AGAGTCATAGTGAACCTGGA+AGG 0.630016 1_2:+52979607 Msa0076700:CDS
AAACAGTGTCTCAAGTTCAG+GGG 0.648434 1_2:+52980600 Msa0076700:CDS
TCTTATCAACTTGATGAGAG+AGG 0.649092 1_2:+52981035 Msa0076700:CDS
AAGTTGATGCGGTATCACGA+TGG 0.650005 1_2:+52982819 Msa0076700:CDS
TGAATCTTCAGATGAAAGCG+AGG 0.654788 1_2:+52980013 Msa0076700:intron
GATTAGTGAAAGAGTGTGTG+TGG 0.659566 1_2:-52978209 None:intergenic
ATATAGCAGCGACCACCGGA+GGG 0.663604 1_2:+52981091 Msa0076700:CDS
AGTGGCTATTGAACACTCGA+AGG 0.665070 1_2:+52979489 Msa0076700:CDS
GGAACAGATAAATGTTGCAG+AGG 0.665164 1_2:+52980409 Msa0076700:CDS
GGATCCATCTAAAGTTGATG+CGG 0.667035 1_2:+52982808 Msa0076700:CDS
TGAAACCAGTCAATTGCTTG+GGG 0.667240 1_2:+52980223 Msa0076700:CDS
TGTTCAGCAAGATTGACTTG+AGG 0.667954 1_2:+52982434 Msa0076700:intron
ACTATCTGCGATACAAGTCA+CGG 0.668223 1_2:+52980527 Msa0076700:CDS
AATTCAACCTCCCTCTCCGG+CGG 0.695090 1_2:-52982127 None:intergenic
ATTAGTGAAAGAGTGTGTGT+GGG 0.716034 1_2:-52978208 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATCTCTTTAATATATT+TGG - chr1_2:52979373-52979392 None:intergenic 10.0%
!! TATTAAATTATTCAAAACAA+TGG - chr1_2:52980876-52980895 None:intergenic 10.0%
!!! TTTTTCATTTCAAAATAAAT+AGG + chr1_2:52981474-52981493 Msa0076700:intron 10.0%
!! AGAATATGATTATATAAGTA+GGG - chr1_2:52978250-52978269 None:intergenic 15.0%
!! AAGAATATGATTATATAAGT+AGG - chr1_2:52978251-52978270 None:intergenic 15.0%
!! TATAACTATTACTTTCTTAT+TGG + chr1_2:52979000-52979019 Msa0076700:intron 15.0%
!! ATAACTATTACTTTCTTATT+GGG + chr1_2:52979001-52979020 Msa0076700:intron 15.0%
!! ATTTCACTGTTATTATTTAA+TGG + chr1_2:52981540-52981559 Msa0076700:intron 15.0%
!! TTTACAGAAATATAATGAAA+TGG - chr1_2:52981819-52981838 None:intergenic 15.0%
!!! ATTGTTAAAATAACTTTTAG+TGG + chr1_2:52981969-52981988 Msa0076700:intron 15.0%
!!! TTGTTAAAATAACTTTTAGT+GGG + chr1_2:52981970-52981989 Msa0076700:intron 15.0%
!! ACCTAAAATAGAATTAAGAA+CGG - chr1_2:52978296-52978315 None:intergenic 20.0%
!! ATCTACAATCATAATTGAAT+AGG - chr1_2:52978548-52978567 None:intergenic 20.0%
!! ATACAAATAAAACATGATCA+CGG - chr1_2:52978624-52978643 None:intergenic 20.0%
!!! ATCATGTTTTATTTGTATTC+TGG + chr1_2:52978626-52978645 Msa0076700:intron 20.0%
!!! TAAATTTAACTTTCTACCTA+AGG + chr1_2:52978714-52978733 Msa0076700:intron 20.0%
!! TAAACAAAAATACTAACTTG+AGG + chr1_2:52978914-52978933 Msa0076700:intron 20.0%
!! TAACTATTACTTTCTTATTG+GGG + chr1_2:52979002-52979021 Msa0076700:intron 20.0%
!! ATATTAAAGAGATATTACAC+TGG + chr1_2:52979376-52979395 Msa0076700:intron 20.0%
!! TATTAAAGAGATATTACACT+GGG + chr1_2:52979377-52979396 Msa0076700:intron 20.0%
!!! GTAATTTTTTAGAAATTGCT+GGG - chr1_2:52979555-52979574 None:intergenic 20.0%
!!! AGTAATTTTTTAGAAATTGC+TGG - chr1_2:52979556-52979575 None:intergenic 20.0%
!! AGTTCTATCAAATATAAGTA+AGG - chr1_2:52980834-52980853 None:intergenic 20.0%
!!! AGCTTTTAAATATTTGATGA+TGG + chr1_2:52981222-52981241 Msa0076700:intron 20.0%
!! AGAAATATAATGAAATGGTT+TGG - chr1_2:52981814-52981833 None:intergenic 20.0%
!! TAAAAGAACTCTTTCATATA+TGG - chr1_2:52981845-52981864 None:intergenic 20.0%
!!! CTTCATCTTTTACTTTAATT+TGG - chr1_2:52982471-52982490 None:intergenic 20.0%
!! ATATGGACATTATGAATATA+AGG + chr1_2:52982519-52982538 Msa0076700:CDS 20.0%
!!! TAAAGGTAAAATTTTTGTGT+GGG + chr1_2:52982955-52982974 Msa0076700:CDS 20.0%
! CCTAAAATAGAATTAAGAAC+GGG - chr1_2:52978295-52978314 None:intergenic 25.0%
!! CCAATTCAAGTTAACAAATT+CGG - chr1_2:52978654-52978673 None:intergenic 25.0%
!!! CGAATTTGTTAACTTGAATT+GGG + chr1_2:52978652-52978671 Msa0076700:intron 25.0%
! TGTTTAATCATACAATCCTT+AGG - chr1_2:52978733-52978752 None:intergenic 25.0%
! AACTATTACTTTCTTATTGG+GGG + chr1_2:52979003-52979022 Msa0076700:intron 25.0%
! TATATGACACTTGAGTTTAT+CGG + chr1_2:52979064-52979083 Msa0076700:intron 25.0%
! AGCAAGTCAATTTACAATTA+GGG - chr1_2:52979102-52979121 None:intergenic 25.0%
! AAGCAAGTCAATTTACAATT+AGG - chr1_2:52979103-52979122 None:intergenic 25.0%
! ATTAGTATGTGAACTATTCA+AGG + chr1_2:52979219-52979238 Msa0076700:intron 25.0%
! TTTCTGACTGTAACAAATTT+AGG + chr1_2:52979275-52979294 Msa0076700:intron 25.0%
!!! TCATAAGCTTGTTAAAAGTA+TGG + chr1_2:52979770-52979789 Msa0076700:CDS 25.0%
!! CAGTCCTATTTTCTTATATT+TGG + chr1_2:52980783-52980802 Msa0076700:intron 25.0%
! GCATCCAAATATAAGAAAAT+AGG - chr1_2:52980790-52980809 None:intergenic 25.0%
! TCACTGTTATTATTTAATGG+AGG + chr1_2:52981543-52981562 Msa0076700:intron 25.0%
! ATATTGTTCCTCTAATCTTT+AGG + chr1_2:52981882-52981901 Msa0076700:intron 25.0%
! TATTGTTCCTCTAATCTTTA+GGG + chr1_2:52981883-52981902 Msa0076700:intron 25.0%
!! ATTTTCTATTGATCTTGTTC+CGG + chr1_2:52982147-52982166 Msa0076700:CDS 25.0%
! AAGTGGATATCTATTCTTTA+TGG - chr1_2:52982371-52982390 None:intergenic 25.0%
!! GTAAAGGTAAAATTTTTGTG+TGG + chr1_2:52982954-52982973 Msa0076700:CDS 25.0%
! ATATTGTGATGTGTCTAAAT+TGG + chr1_2:52983072-52983091 Msa0076700:CDS 25.0%
! TATTGTGATGTGTCTAAATT+GGG + chr1_2:52983073-52983092 Msa0076700:CDS 25.0%
ACGGGAAAAATGATTGAAAT+AGG - chr1_2:52978277-52978296 None:intergenic 30.0%
! CCCGTTCTTAATTCTATTTT+AGG + chr1_2:52978292-52978311 Msa0076700:five_prime_UTR 30.0%
ATAGGTATGTATGTATACCT+GGG - chr1_2:52978530-52978549 None:intergenic 30.0%
AATAGGTATGTATGTATACC+TGG - chr1_2:52978531-52978550 None:intergenic 30.0%
!! CCGAATTTGTTAACTTGAAT+TGG + chr1_2:52978651-52978670 Msa0076700:intron 30.0%
ACTAAAAACATAGGGAACTT+GGG - chr1_2:52978776-52978795 None:intergenic 30.0%
TTCAAACGCTATAATTGCAT+GGG - chr1_2:52978799-52978818 None:intergenic 30.0%
TTTCAAACGCTATAATTGCA+TGG - chr1_2:52978800-52978819 None:intergenic 30.0%
! TTGTTGCTTATAGTCGTTAT+TGG + chr1_2:52978849-52978868 Msa0076700:intron 30.0%
! TGTTGCTTATAGTCGTTATT+GGG + chr1_2:52978850-52978869 Msa0076700:intron 30.0%
!! CCTACAATTAAAGTGTTTTC+TGG - chr1_2:52978949-52978968 None:intergenic 30.0%
CCAGAAAACACTTTAATTGT+AGG + chr1_2:52978946-52978965 Msa0076700:intron 30.0%
! TTGAGTTTATCGGATTTTCA+AGG + chr1_2:52979074-52979093 Msa0076700:intron 30.0%
AAGCTATTTAGAGAATGGTA+TGG - chr1_2:52979660-52979679 None:intergenic 30.0%
AAAGCAAGCTATTTAGAGAA+TGG - chr1_2:52979665-52979684 None:intergenic 30.0%
!! CTAAATAGCTTGCTTTGAAA+CGG + chr1_2:52979669-52979688 Msa0076700:intron 30.0%
AAAGTGAAAGTGAAGATGAA+GGG + chr1_2:52979733-52979752 Msa0076700:CDS 30.0%
! CTTGTTAAAAGTATGGATGT+TGG + chr1_2:52979777-52979796 Msa0076700:CDS 30.0%
CTTCTTCACATTATGTACAT+CGG + chr1_2:52979805-52979824 Msa0076700:CDS 30.0%
TTCTTCACATTATGTACATC+GGG + chr1_2:52979806-52979825 Msa0076700:CDS 30.0%
TTACTGTAACATTCAGATCT+GGG - chr1_2:52979863-52979882 None:intergenic 30.0%
CAAGGTTTATAAATGCTACA+GGG - chr1_2:52979905-52979924 None:intergenic 30.0%
TCAAGGTTTATAAATGCTAC+AGG - chr1_2:52979906-52979925 None:intergenic 30.0%
GTAGCATTTATAAACCTTGA+AGG + chr1_2:52979906-52979925 Msa0076700:CDS 30.0%
!! AGCTAGTGAAAATTTTGATC+AGG + chr1_2:52980322-52980341 Msa0076700:CDS 30.0%
!! GCTAGTGAAAATTTTGATCA+GGG + chr1_2:52980323-52980342 Msa0076700:CDS 30.0%
GGATGTCATTGTTGAAAATT+TGG + chr1_2:52980355-52980374 Msa0076700:CDS 30.0%
AAACAATCTGAATGAAGAGT+GGG + chr1_2:52980469-52980488 Msa0076700:CDS 30.0%
!!! ATTTGTTTTTGCTTCATCGA+TGG - chr1_2:52980753-52980772 None:intergenic 30.0%
CGATGAAGCAAAAACAAATA+AGG + chr1_2:52980754-52980773 Msa0076700:CDS 30.0%
ATTCAAAACAATGGTTACAC+TGG - chr1_2:52980867-52980886 None:intergenic 30.0%
!!! GAAAACCTTGTTTTCATCAA+TGG + chr1_2:52981008-52981027 Msa0076700:intron 30.0%
AGATTCCATTGATGAAAACA+AGG - chr1_2:52981016-52981035 None:intergenic 30.0%
AGGGTTTGATATTCTAGATA+GGG + chr1_2:52981110-52981129 Msa0076700:CDS 30.0%
!!! TGATGGTTTTTTAGACATGA+TGG + chr1_2:52981239-52981258 Msa0076700:intron 30.0%
TCTGAATAATCTCAGTTAGT+CGG - chr1_2:52981512-52981531 None:intergenic 30.0%
CTAACTGAGATTATTCAGAT+CGG + chr1_2:52981513-52981532 Msa0076700:intron 30.0%
AAAGCTTGAAAAAGAGGAAT+CGG + chr1_2:52981674-52981693 Msa0076700:CDS 30.0%
ATTGTTCCTCTAATCTTTAG+GGG + chr1_2:52981884-52981903 Msa0076700:intron 30.0%
!!! TTTAGTGGGTTTTAAGATCA+TGG + chr1_2:52981984-52982003 Msa0076700:intron 30.0%
! TTTTCTATTGATCTTGTTCC+GGG + chr1_2:52982148-52982167 Msa0076700:CDS 30.0%
TTCTTCTTAACCAACAATAC+CGG - chr1_2:52982298-52982317 None:intergenic 30.0%
! TTGTTGGTTAAGAAGAAAGA+TGG + chr1_2:52982301-52982320 Msa0076700:CDS 30.0%
TCTATCAAGTCATCAATTCT+TGG - chr1_2:52982394-52982413 None:intergenic 30.0%
TACCACTACTAGAGATAATA+TGG - chr1_2:52982781-52982800 None:intergenic 30.0%
! TACTGAAGTTAGAAGCTTTT+TGG + chr1_2:52982859-52982878 Msa0076700:CDS 30.0%
! ACTGAAGTTAGAAGCTTTTT+GGG + chr1_2:52982860-52982879 Msa0076700:CDS 30.0%
TACTATCGAAGGTTTATAGA+AGG + chr1_2:52982893-52982912 Msa0076700:CDS 30.0%
! AAATTTTTGTGTGGGATGTT+CGG + chr1_2:52982963-52982982 Msa0076700:CDS 30.0%
ACATCACAATATACCACAAA+AGG - chr1_2:52983064-52983083 None:intergenic 30.0%
! ATTAGTGAAAGAGTGTGTGT+GGG - chr1_2:52978211-52978230 None:intergenic 35.0%
AATCATGCATATTCGACGTT+AGG + chr1_2:52978413-52978432 Msa0076700:intron 35.0%
ATCATGCATATTCGACGTTA+GGG + chr1_2:52978414-52978433 Msa0076700:intron 35.0%
TAGGTATGTATGTATACCTG+GGG - chr1_2:52978529-52978548 None:intergenic 35.0%
GACTAAAAACATAGGGAACT+TGG - chr1_2:52978777-52978796 None:intergenic 35.0%
TGCATGGGACTAAAAACATA+GGG - chr1_2:52978784-52978803 None:intergenic 35.0%
TTGCATGGGACTAAAAACAT+AGG - chr1_2:52978785-52978804 None:intergenic 35.0%
ATTACTTTCTTATTGGGGGA+TGG + chr1_2:52979007-52979026 Msa0076700:intron 35.0%
TGGAATGGTTACATCAATCA+TGG + chr1_2:52979027-52979046 Msa0076700:intron 35.0%
ATACAGGCAAAGAAAGAAAC+AGG - chr1_2:52979444-52979463 None:intergenic 35.0%
GTTTCTTTCTTTGCCTGTAT+AGG + chr1_2:52979444-52979463 Msa0076700:intron 35.0%
GAAAGTGAAAGTGAAGATGA+AGG + chr1_2:52979732-52979751 Msa0076700:CDS 35.0%
AAGTGAAAGTGAAGATGAAG+GGG + chr1_2:52979734-52979753 Msa0076700:CDS 35.0%
GTTACTGTAACATTCAGATC+TGG - chr1_2:52979864-52979883 None:intergenic 35.0%
AGAAAGTGAACAAACCTTCA+AGG - chr1_2:52979923-52979942 None:intergenic 35.0%
! ATACCTTGCTTGCTTTGAAT+TGG + chr1_2:52979963-52979982 Msa0076700:intron 35.0%
CTGTTGAAGATACTGATGTT+GGG + chr1_2:52980066-52980085 Msa0076700:CDS 35.0%
ATGAAACCAGTCAATTGCTT+GGG + chr1_2:52980222-52980241 Msa0076700:CDS 35.0%
TTGCTTGGGGTAAATAATGA+TGG + chr1_2:52980236-52980255 Msa0076700:CDS 35.0%
TATCTCTAGTGAAATTTCCC+AGG + chr1_2:52980274-52980293 Msa0076700:CDS 35.0%
! AAATCCATTTGATGACTCCT+GGG - chr1_2:52980294-52980313 None:intergenic 35.0%
! AAAATCCATTTGATGACTCC+TGG - chr1_2:52980295-52980314 None:intergenic 35.0%
!! AGGAGTCATCAAATGGATTT+TGG + chr1_2:52980294-52980313 Msa0076700:CDS 35.0%
GTTGAAAATTTGGCATCTTC+AGG + chr1_2:52980365-52980384 Msa0076700:CDS 35.0%
CAAACAATCTGAATGAAGAG+TGG + chr1_2:52980468-52980487 Msa0076700:CDS 35.0%
ATTGATGAGAATACGACTCT+AGG + chr1_2:52980686-52980705 Msa0076700:CDS 35.0%
TCTTATCAACTTGATGAGAG+AGG + chr1_2:52981035-52981054 Msa0076700:CDS 35.0%
! ATCTAGAATATCAAACCCTC+CGG - chr1_2:52981109-52981128 None:intergenic 35.0%
GAGGGTTTGATATTCTAGAT+AGG + chr1_2:52981109-52981128 Msa0076700:CDS 35.0%
AAGAAGCAAATGACATGGTT+CGG + chr1_2:52981166-52981185 Msa0076700:intron 35.0%
!! ACTTTTTATTTGCAGCATGC+TGG + chr1_2:52981282-52981301 Msa0076700:intron 35.0%
!! CTTTTTATTTGCAGCATGCT+GGG + chr1_2:52981283-52981302 Msa0076700:intron 35.0%
!! TTTTTATTTGCAGCATGCTG+GGG + chr1_2:52981284-52981303 Msa0076700:intron 35.0%
CTAATCGAGATTCAAGACTT+TGG - chr1_2:52981617-52981636 None:intergenic 35.0%
GCTTGAAAAGCTTGAAAAAG+AGG + chr1_2:52981668-52981687 Msa0076700:CDS 35.0%
! TCTAGAACAAGAAGCAATGA+TGG + chr1_2:52981710-52981729 Msa0076700:CDS 35.0%
TTGAGATCCTCTCCATTTAA+TGG + chr1_2:52981907-52981926 Msa0076700:intron 35.0%
!! AAATGGGAGTGTCCATTAAA+TGG - chr1_2:52981922-52981941 None:intergenic 35.0%
! ATTTAATGGACACTCCCATT+TGG + chr1_2:52981921-52981940 Msa0076700:intron 35.0%
AGAAGAAAGATGGTAGTATG+AGG + chr1_2:52982311-52982330 Msa0076700:CDS 35.0%
AAGTCATCAATTCTTGGAAG+TGG - chr1_2:52982388-52982407 None:intergenic 35.0%
AGATGAAGATATGCAGAAGA+CGG + chr1_2:52982483-52982502 Msa0076700:CDS 35.0%
! GAATATAAGGTGATGCCTTT+TGG + chr1_2:52982532-52982551 Msa0076700:intron 35.0%
ATATACTCCATAAACACACC+AGG - chr1_2:52982571-52982590 None:intergenic 35.0%
! ATCGCATTTCCATGCATTTT+TGG + chr1_2:52982593-52982612 Msa0076700:intron 35.0%
AATTGTCTAGGTGTGAATTC+TGG + chr1_2:52982733-52982752 Msa0076700:intron 35.0%
! CTAACTTCAGTAACTGACTT+TGG - chr1_2:52982851-52982870 None:intergenic 35.0%
!!! AGTTAGAAGCTTTTTGGGTT+TGG + chr1_2:52982865-52982884 Msa0076700:CDS 35.0%
GGTTTCGGCAAAATCAAAAT+TGG - chr1_2:52983034-52983053 None:intergenic 35.0%
ACAAAAGGTTCATCAGGTTT+CGG - chr1_2:52983049-52983068 None:intergenic 35.0%
TATACCACAAAAGGTTCATC+AGG - chr1_2:52983055-52983074 None:intergenic 35.0%
! GATTAGTGAAAGAGTGTGTG+TGG - chr1_2:52978212-52978231 None:intergenic 40.0%
! TTTTGCATGACGTAACTCAC+AGG + chr1_2:52978350-52978369 Msa0076700:intron 40.0%
TTTGCATGACGTAACTCACA+GGG + chr1_2:52978351-52978370 Msa0076700:intron 40.0%
TACGTCAAATCGTCTCATCA+TGG + chr1_2:52978465-52978484 Msa0076700:exon 40.0%
ACGTCAAATCGTCTCATCAT+GGG + chr1_2:52978466-52978485 Msa0076700:exon 40.0%
! TTTGCTCGATATTTTTCCCC+AGG + chr1_2:52978510-52978529 Msa0076700:CDS 40.0%
!!! GGTTTTGGAATTTGCAAGGT+CGG + chr1_2:52978887-52978906 Msa0076700:intron 40.0%
TTTCTTATTGGGGGATGGAA+TGG + chr1_2:52979012-52979031 Msa0076700:intron 40.0%
AGCGATAGAAGACTTATTCG+TGG - chr1_2:52979345-52979364 None:intergenic 40.0%
GAGATATTACACTGGGAATG+TGG + chr1_2:52979384-52979403 Msa0076700:intron 40.0%
AAGAAGCAGGTATCAGTAAC+AGG - chr1_2:52979414-52979433 None:intergenic 40.0%
TCTTTCTTTGCCTGTATAGG+TGG + chr1_2:52979447-52979466 Msa0076700:intron 40.0%
TAAAAGTAGACTCACCTTCC+AGG - chr1_2:52979624-52979643 None:intergenic 40.0%
! TGAAGATGAAGGGGAGATTT+TGG + chr1_2:52979743-52979762 Msa0076700:CDS 40.0%
CAAAGCAAGCAAGGTATAGA+TGG - chr1_2:52979960-52979979 None:intergenic 40.0%
ACACCAATTCAAAGCAAGCA+AGG - chr1_2:52979969-52979988 None:intergenic 40.0%
TGAATCTTCAGATGAAAGCG+AGG + chr1_2:52980013-52980032 Msa0076700:intron 40.0%
CCAACATCAGTATCTTCAAC+AGG - chr1_2:52980068-52980087 None:intergenic 40.0%
CCTGTTGAAGATACTGATGT+TGG + chr1_2:52980065-52980084 Msa0076700:CDS 40.0%
! GCAGCTTTGATGATTTGTAC+AGG - chr1_2:52980128-52980147 None:intergenic 40.0%
ATCCAGTCCACAAGAAGAAT+CGG - chr1_2:52980150-52980169 None:intergenic 40.0%
! GGTTTCATCATTTAGCTCAC+TGG - chr1_2:52980210-52980229 None:intergenic 40.0%
GATGAAACCAGTCAATTGCT+TGG + chr1_2:52980221-52980240 Msa0076700:CDS 40.0%
TGAAACCAGTCAATTGCTTG+GGG + chr1_2:52980223-52980242 Msa0076700:CDS 40.0%
ATTTACCCCAAGCAATTGAC+TGG - chr1_2:52980231-52980250 None:intergenic 40.0%
ATTTCCCAGGAGTCATCAAA+TGG + chr1_2:52980287-52980306 Msa0076700:CDS 40.0%
TTCAGGTGTATATCACGTGT+TGG + chr1_2:52980382-52980401 Msa0076700:CDS 40.0%
TGTATATCACGTGTTGGAGA+CGG + chr1_2:52980388-52980407 Msa0076700:CDS 40.0%
GGAACAGATAAATGTTGCAG+AGG + chr1_2:52980409-52980428 Msa0076700:CDS 40.0%
ACAGATAAATGTTGCAGAGG+AGG + chr1_2:52980412-52980431 Msa0076700:CDS 40.0%
GCTACTTCCATGACTAACAA+TGG + chr1_2:52980434-52980453 Msa0076700:CDS 40.0%
TCCATGACTAACAATGGCAA+TGG + chr1_2:52980440-52980459 Msa0076700:CDS 40.0%
TCCATTGCCATTGTTAGTCA+TGG - chr1_2:52980444-52980463 None:intergenic 40.0%
! GTGGGTAGATTTTGTTCCTA+AGG + chr1_2:52980487-52980506 Msa0076700:CDS 40.0%
GCATCATAATCTTCAGCCTT+AGG - chr1_2:52980506-52980525 None:intergenic 40.0%
ACTATCTGCGATACAAGTCA+CGG + chr1_2:52980527-52980546 Msa0076700:CDS 40.0%
TCAAACAGTGTCTCAAGTTC+AGG + chr1_2:52980598-52980617 Msa0076700:CDS 40.0%
CAAACAGTGTCTCAAGTTCA+GGG + chr1_2:52980599-52980618 Msa0076700:CDS 40.0%
AAACAGTGTCTCAAGTTCAG+GGG + chr1_2:52980600-52980619 Msa0076700:CDS 40.0%
TACTGCAGGCTGGATTATAT+TGG - chr1_2:52980712-52980731 None:intergenic 40.0%
CTCAAGCATATCAATACTGC+AGG - chr1_2:52980726-52980745 None:intergenic 40.0%
!! CTGCAGTATTGATATGCTTG+AGG + chr1_2:52980724-52980743 Msa0076700:CDS 40.0%
TATCAACTTGATGAGAGAGG+TGG + chr1_2:52981038-52981057 Msa0076700:CDS 40.0%
AGATGAGTATCAAGCCATGT+TGG + chr1_2:52981134-52981153 Msa0076700:CDS 40.0%
CGCTAAAGAAGCAAATGACA+TGG + chr1_2:52981161-52981180 Msa0076700:CDS 40.0%
TGGGGAAATTTATGGCGAAA+AGG + chr1_2:52981302-52981321 Msa0076700:CDS 40.0%
TTATGGCGAAAAGGCAATTC+TGG + chr1_2:52981311-52981330 Msa0076700:CDS 40.0%
GTCTCTTGCAATTCTTGATG+AGG + chr1_2:52981392-52981411 Msa0076700:CDS 40.0%
AGCAGAAATGTTGAGGAAAG+CGG + chr1_2:52981641-52981660 Msa0076700:CDS 40.0%
TTGAAAAAGAGGAATCGGCA+AGG + chr1_2:52981679-52981698 Msa0076700:CDS 40.0%
TGAAAAAGAGGAATCGGCAA+GGG + chr1_2:52981680-52981699 Msa0076700:CDS 40.0%
! ACAAGAAGCAATGATGGAGA+AGG + chr1_2:52981716-52981735 Msa0076700:CDS 40.0%
! AATGATGGAGAAGGTAGTAC+AGG + chr1_2:52981725-52981744 Msa0076700:CDS 40.0%
AGAAGGTAGTACAGGAATCA+CGG + chr1_2:52981733-52981752 Msa0076700:CDS 40.0%
GGAAGCTGAAGAGAATTCAA+AGG + chr1_2:52981767-52981786 Msa0076700:CDS 40.0%
! ATGAAATGGTTTGGAAGCAG+AGG - chr1_2:52981805-52981824 None:intergenic 40.0%
TCTCAACCCCTAAAGATTAG+AGG - chr1_2:52981893-52981912 None:intergenic 40.0%
CATTGTCTCTCTCTCCAAAT+GGG - chr1_2:52981938-52981957 None:intergenic 40.0%
TCATTGTCTCTCTCTCCAAA+TGG - chr1_2:52981939-52981958 None:intergenic 40.0%
TTTCTTCAACTCAGCCAACT+CGG - chr1_2:52982215-52982234 None:intergenic 40.0%
! TGAGTTGAAGAAACAGTTGG+AGG + chr1_2:52982222-52982241 Msa0076700:CDS 40.0%
TAAGACCAAGTGTTTCACCT+TGG + chr1_2:52982266-52982285 Msa0076700:CDS 40.0%
AAGACCAAGTGTTTCACCTT+GGG + chr1_2:52982267-52982286 Msa0076700:CDS 40.0%
!! TGTTCAGCAAGATTGACTTG+AGG + chr1_2:52982434-52982453 Msa0076700:intron 40.0%
!! AGCAAGATTGACTTGAGGTT+CGG + chr1_2:52982439-52982458 Msa0076700:intron 40.0%
! ATATGCAGAAGACGGCTTTT+AGG + chr1_2:52982491-52982510 Msa0076700:CDS 40.0%
!! AAGTGCTGAAAGAGAAGAAG+CGG + chr1_2:52982703-52982722 Msa0076700:CDS 40.0%
AGCGGTATGCTAAATTGTCT+AGG + chr1_2:52982721-52982740 Msa0076700:intron 40.0%
! TAGGTGTGAATTCTGGTTGA+AGG + chr1_2:52982740-52982759 Msa0076700:intron 40.0%
! AGGTGTGAATTCTGGTTGAA+GGG + chr1_2:52982741-52982760 Msa0076700:intron 40.0%
GTTGAAGGGAGTAAGTTTCT+TGG + chr1_2:52982755-52982774 Msa0076700:intron 40.0%
GGCCATATTATCTCTAGTAG+TGG + chr1_2:52982776-52982795 Msa0076700:intron 40.0%
!! GGATCCATCTAAAGTTGATG+CGG + chr1_2:52982808-52982827 Msa0076700:CDS 40.0%
GATACCGCATCAACTTTAGA+TGG - chr1_2:52982815-52982834 None:intergenic 40.0%
TTACACGTCAACTGCGTTAA+CGG - chr1_2:52982938-52982957 None:intergenic 40.0%
TTAACGCAGTTGACGTGTAA+AGG + chr1_2:52982938-52982957 Msa0076700:CDS 40.0%
!! ATTGAAGAAGCGTTTGACGA+CGG + chr1_2:52983006-52983025 Msa0076700:CDS 40.0%
! GAAACCTGATGAACCTTTTG+TGG + chr1_2:52983048-52983067 Msa0076700:CDS 40.0%
ACGCAATTTCCCTATGAGTC+TGG - chr1_2:52978149-52978168 None:intergenic 45.0%
CGCGTGCAACAATTAACACT+AGG + chr1_2:52978180-52978199 Msa0076700:five_prime_UTR 45.0%
TGCAAATTCCAAAACCGTCG+CGG - chr1_2:52978883-52978902 None:intergenic 45.0%
!!! CGACGGTTTTGGAATTTGCA+AGG + chr1_2:52978883-52978902 Msa0076700:intron 45.0%
TATTACACTGGGAATGTGGC+TGG + chr1_2:52979388-52979407 Msa0076700:intron 45.0%
AACCTGGAATCCACCTATAC+AGG - chr1_2:52979460-52979479 None:intergenic 45.0%
AGTGGCTATTGAACACTCGA+AGG + chr1_2:52979489-52979508 Msa0076700:CDS 45.0%
ACACTCGAAGGATGCTGATA+TGG + chr1_2:52979501-52979520 Msa0076700:CDS 45.0%
TAGGGTTTGTATCCCGTGAA+GGG - chr1_2:52979588-52979607 None:intergenic 45.0%
CCAGGTTCACTATGACTCTA+GGG - chr1_2:52979606-52979625 None:intergenic 45.0%
TCCAGGTTCACTATGACTCT+AGG - chr1_2:52979607-52979626 None:intergenic 45.0%
AGAGTCATAGTGAACCTGGA+AGG + chr1_2:52979607-52979626 Msa0076700:CDS 45.0%
AAATCTGCCAGCTCTTCTTC+TGG + chr1_2:52979837-52979856 Msa0076700:CDS 45.0%
!!! GCTACAGGGCTTTTAACTTG+TGG - chr1_2:52979891-52979910 None:intergenic 45.0%
TCAGATGAAAGCGAGGATGA+AGG + chr1_2:52980020-52980039 Msa0076700:intron 45.0%
CAGATGAAAGCGAGGATGAA+GGG + chr1_2:52980021-52980040 Msa0076700:intron 45.0%
AAAGCGAGGATGAAGGGAAA+AGG + chr1_2:52980027-52980046 Msa0076700:CDS 45.0%
TGGGTCGTCTTCATCATCAT+TGG + chr1_2:52980085-52980104 Msa0076700:CDS 45.0%
!! AAAGCTGCCGATTCTTCTTG+TGG + chr1_2:52980140-52980159 Msa0076700:CDS 45.0%
! TTTTGATCAGGGACGACTTG+TGG + chr1_2:52980334-52980353 Msa0076700:CDS 45.0%
! AGAGTCTTCTGACTCGATCA+AGG - chr1_2:52980573-52980592 None:intergenic 45.0%
AGCATATCAATACTGCAGGC+TGG - chr1_2:52980722-52980741 None:intergenic 45.0%
TAGAATATCAAACCCTCCGG+TGG - chr1_2:52981106-52981125 None:intergenic 45.0%
TTCTTTAGCGTGCACCAACA+TGG - chr1_2:52981151-52981170 None:intergenic 45.0%
CAGCATGCTGGGGAAATTTA+TGG + chr1_2:52981294-52981313 Msa0076700:intron 45.0%
CAGTTAGTCGGAAAGATGCT+CGG - chr1_2:52981500-52981519 None:intergenic 45.0%
TAGCTGCAGCAGAAATGTTG+AGG + chr1_2:52981634-52981653 Msa0076700:CDS 45.0%
! GGAGTGTCCATTAAATGGAG+AGG - chr1_2:52981917-52981936 None:intergenic 45.0%
GAAAATTCAACCTCCCTCTC+CGG - chr1_2:52982133-52982152 None:intergenic 45.0%
! CGATAAGGTGTCATCGATAC+AGG - chr1_2:52982181-52982200 None:intergenic 45.0%
TCGGAAGCTGACATACGATA+AGG - chr1_2:52982196-52982215 None:intergenic 45.0%
! GGCTGAGTTGAAGAAACAGT+TGG + chr1_2:52982219-52982238 Msa0076700:CDS 45.0%
AGACCAAGTGTTTCACCTTG+GGG + chr1_2:52982268-52982287 Msa0076700:CDS 45.0%
TGACTTGATAGACCAGCTAG+TGG + chr1_2:52982402-52982421 Msa0076700:intron 45.0%
GACTTGATAGACCAGCTAGT+GGG + chr1_2:52982403-52982422 Msa0076700:intron 45.0%
GGCGCATTACTAACACCAAA+AGG - chr1_2:52982550-52982569 None:intergenic 45.0%
!! TTTGGTGTTAGTAATGCGCC+TGG + chr1_2:52982550-52982569 Msa0076700:intron 45.0%
TAATGCGCCTGGTGTGTTTA+TGG + chr1_2:52982561-52982580 Msa0076700:intron 45.0%
CGATGAATACAACCACGAAG+CGG - chr1_2:52982620-52982639 None:intergenic 45.0%
CTCTAGTAGTGGTATTGCAG+TGG + chr1_2:52982787-52982806 Msa0076700:intron 45.0%
!! AAGTTGATGCGGTATCACGA+TGG + chr1_2:52982819-52982838 Msa0076700:CDS 45.0%
! AGTTGATGCGGTATCACGAT+GGG + chr1_2:52982820-52982839 Msa0076700:CDS 45.0%
!!! AGAAGCTTTTTGGGTTTGGC+AGG + chr1_2:52982869-52982888 Msa0076700:CDS 45.0%
GTTTGGCAGGTTACTATCGA+AGG + chr1_2:52982882-52982901 Msa0076700:CDS 45.0%
AATTCCAAAACCGTCGCGGT+AGG - chr1_2:52978879-52978898 None:intergenic 50.0%
AACAGGCATCAGCAAGAAGC+AGG - chr1_2:52979427-52979446 None:intergenic 50.0%
! TGCCTGTATAGGTGGATTCC+AGG + chr1_2:52979455-52979474 Msa0076700:intron 50.0%
! AGGTGGATTCCAGGTTGTTG+AGG + chr1_2:52979464-52979483 Msa0076700:intron 50.0%
! GGTGGATTCCAGGTTGTTGA+GGG + chr1_2:52979465-52979484 Msa0076700:intron 50.0%
GAAGGATGCTGATATGGCTG+CGG + chr1_2:52979507-52979526 Msa0076700:CDS 50.0%
GGCTGCGGAAGTTGTTCTTA+CGG + chr1_2:52979522-52979541 Msa0076700:CDS 50.0%
TACTTCCAGCATCCCCTTCA+CGG + chr1_2:52979572-52979591 Msa0076700:CDS 50.0%
AGGGTTTGTATCCCGTGAAG+GGG - chr1_2:52979587-52979606 None:intergenic 50.0%
CTAGGGTTTGTATCCCGTGA+AGG - chr1_2:52979589-52979608 None:intergenic 50.0%
CCCTAGAGTCATAGTGAACC+TGG + chr1_2:52979603-52979622 Msa0076700:CDS 50.0%
CGAGGATGAAGGGAAAAGGT+TGG + chr1_2:52980031-52980050 Msa0076700:CDS 50.0%
!! TGCCGATTCTTCTTGTGGAC+TGG + chr1_2:52980145-52980164 Msa0076700:CDS 50.0%
CTGCGATACAAGTCACGGAT+TGG + chr1_2:52980532-52980551 Msa0076700:CDS 50.0%
GATGAGAGAGGTGGAACATC+AGG + chr1_2:52981047-52981066 Msa0076700:CDS 50.0%
TCAGGAGAAACTTGCAGAGC+AGG + chr1_2:52981065-52981084 Msa0076700:CDS 50.0%
AATTCTGGCGACTGAGCTGA+AGG + chr1_2:52981326-52981345 Msa0076700:CDS 50.0%
TGTCCAGCTTGTCTGGTGAA+AGG + chr1_2:52981364-52981383 Msa0076700:CDS 50.0%
GTCCAGCTTGTCTGGTGAAA+GGG + chr1_2:52981365-52981384 Msa0076700:CDS 50.0%
ATCCCTTTCACCAGACAAGC+TGG - chr1_2:52981370-52981389 None:intergenic 50.0%
ATCGATACAGGCTTCGTTCC+CGG - chr1_2:52982169-52982188 None:intergenic 50.0%
TCGTATGTCAGCTTCCGAGT+TGG + chr1_2:52982198-52982217 Msa0076700:CDS 50.0%
!!! ACGGCTTTTAGGACGCGATA+TGG + chr1_2:52982502-52982521 Msa0076700:CDS 50.0%
CGAAGCGGTCCAAAAATGCA+TGG - chr1_2:52982605-52982624 None:intergenic 50.0%
!! TGCATTTTTGGACCGCTTCG+TGG + chr1_2:52982605-52982624 Msa0076700:intron 50.0%
TTCCAGGTTGTTGAGGGCAG+TGG + chr1_2:52979471-52979490 Msa0076700:CDS 55.0%
ACTTCCAGCATCCCCTTCAC+GGG + chr1_2:52979573-52979592 Msa0076700:CDS 55.0%
ATCTGGGCCAGAAGAAGAGC+TGG - chr1_2:52979847-52979866 None:intergenic 55.0%
GCCAATATAGCAGCGACCAC+CGG + chr1_2:52981087-52981106 Msa0076700:CDS 55.0%
TCCGGTGGTCGCTGCTATAT+TGG - chr1_2:52981091-52981110 None:intergenic 55.0%
AATATAGCAGCGACCACCGG+AGG + chr1_2:52981090-52981109 Msa0076700:CDS 55.0%
ATATAGCAGCGACCACCGGA+GGG + chr1_2:52981091-52981110 Msa0076700:CDS 55.0%
TCACGTCTGTCCAGCTTGTC+TGG + chr1_2:52981357-52981376 Msa0076700:CDS 55.0%
GGAATCACGGAGACTACAGC+AGG + chr1_2:52981746-52981765 Msa0076700:CDS 55.0%
AATTCAACCTCCCTCTCCGG+CGG - chr1_2:52982130-52982149 None:intergenic 55.0%
GCTCCCCAAGGTGAAACACT+TGG - chr1_2:52982274-52982293 None:intergenic 55.0%
TATTGGGCCACCTACCGCGA+CGG + chr1_2:52978866-52978885 Msa0076700:intron 60.0%
TCCAAAACCGTCGCGGTAGG+TGG - chr1_2:52978876-52978895 None:intergenic 60.0%
AGCCACTGCCCTCAACAACC+TGG - chr1_2:52979476-52979495 None:intergenic 60.0%
GTATCCCGTGAAGGGGATGC+TGG - chr1_2:52979580-52979599 None:intergenic 60.0%
!! CATCAGGAAGTGTCTGCCGC+CGG + chr1_2:52982111-52982130 Msa0076700:intron 60.0%
! TGTTTCACCTTGGGGAGCGC+CGG + chr1_2:52982276-52982295 Msa0076700:CDS 60.0%
AACAATACCGGCGCTCCCCA+AGG - chr1_2:52982286-52982305 None:intergenic 60.0%
!! TTGGGGAGCGCCGGTATTGT+TGG + chr1_2:52982285-52982304 Msa0076700:CDS 60.0%
ACACACGTGCACCCACTAGC+TGG - chr1_2:52982417-52982436 None:intergenic 60.0%
! GCCACCTACCGCGACGGTTT+TGG + chr1_2:52978872-52978891 Msa0076700:intron 65.0%
! GAAGTGTCTGCCGCCGGAGA+GGG + chr1_2:52982117-52982136 Msa0076700:intron 65.0%
!! GGAAGTGTCTGCCGCCGGAG+AGG + chr1_2:52982116-52982135 Msa0076700:intron 70.0%
GTGTCTGCCGCCGGAGAGGG+AGG + chr1_2:52982120-52982139 Msa0076700:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 52978138 52983099 52978138 ID=Msa0076700;Name=Msa0076700
chr1_2 mRNA 52978138 52983099 52978138 ID=Msa0076700-mRNA-1;Parent=Msa0076700;Name=Msa0076700-mRNA-1;_AED=0.17;_eAED=0.17;_QI=196|0.45|0.41|0.66|0.90|0.83|12|0|770
chr1_2 exon 52978138 52978313 52978138 ID=Msa0076700-mRNA-1:exon:16376;Parent=Msa0076700-mRNA-1
chr1_2 exon 52978464 52978531 52978464 ID=Msa0076700-mRNA-1:exon:16377;Parent=Msa0076700-mRNA-1
chr1_2 exon 52979466 52979628 52979466 ID=Msa0076700-mRNA-1:exon:16378;Parent=Msa0076700-mRNA-1
chr1_2 exon 52979730 52979927 52979730 ID=Msa0076700-mRNA-1:exon:16379;Parent=Msa0076700-mRNA-1
chr1_2 exon 52980024 52980775 52980024 ID=Msa0076700-mRNA-1:exon:16380;Parent=Msa0076700-mRNA-1
chr1_2 exon 52981009 52981182 52981009 ID=Msa0076700-mRNA-1:exon:16381;Parent=Msa0076700-mRNA-1
chr1_2 exon 52981297 52981413 52981297 ID=Msa0076700-mRNA-1:exon:16382;Parent=Msa0076700-mRNA-1
chr1_2 exon 52981609 52981788 52981609 ID=Msa0076700-mRNA-1:exon:16383;Parent=Msa0076700-mRNA-1
chr1_2 exon 52982121 52982332 52982121 ID=Msa0076700-mRNA-1:exon:16384;Parent=Msa0076700-mRNA-1
chr1_2 exon 52982441 52982540 52982441 ID=Msa0076700-mRNA-1:exon:16385;Parent=Msa0076700-mRNA-1
chr1_2 exon 52982663 52982724 52982663 ID=Msa0076700-mRNA-1:exon:16386;Parent=Msa0076700-mRNA-1
chr1_2 exon 52982793 52983099 52982793 ID=Msa0076700-mRNA-1:exon:16387;Parent=Msa0076700-mRNA-1
chr1_2 five_prime_UTR 52978138 52978313 52978138 ID=Msa0076700-mRNA-1:five_prime_utr;Parent=Msa0076700-mRNA-1
chr1_2 five_prime_UTR 52978464 52978483 52978464 ID=Msa0076700-mRNA-1:five_prime_utr;Parent=Msa0076700-mRNA-1
chr1_2 CDS 52978484 52978531 52978484 ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1
chr1_2 CDS 52979466 52979628 52979466 ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1
chr1_2 CDS 52979730 52979927 52979730 ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1
chr1_2 CDS 52980024 52980775 52980024 ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1
chr1_2 CDS 52981009 52981182 52981009 ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1
chr1_2 CDS 52981297 52981413 52981297 ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1
chr1_2 CDS 52981609 52981788 52981609 ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1
chr1_2 CDS 52982121 52982332 52982121 ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1
chr1_2 CDS 52982441 52982540 52982441 ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1
chr1_2 CDS 52982663 52982724 52982663 ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1
chr1_2 CDS 52982793 52983099 52982793 ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1
Gene Sequence

>Msa0076700

ATGGGTTTCAATTCTGTCTATAGATCTTTGCTCGATATTTTTCCCCAGGTGGATTCCAGGTTGTTGAGGGCAGTGGCTATTGAACACTCGAAGGATGCTGATATGGCTGCGGAAGTTGTTCTTACGGAAATCATCCCAGCAATTTCTAAAAAATTACTTCCAGCATCCCCTTCACGGGATACAAACCCTAGAGTCATAGTGAACCTGGAAGATGAAAGTGAAAGTGAAGATGAAGGGGAGATTTTGGCACGTCATAAGCTTGTTAAAAGTATGGATGTTGGCTCTTCTTCTTCACATTATGTACATCGGGAAATCATCAAATCTGCCAGCTCTTCTTCTGGCCCAGATCTGAATGTTACAGTAACTTCTCCACAAGTTAAAAGCCCTGTAGCATTTATAAACCTTGAAGATGAAAGCGAGGATGAAGGGAAAAGGTTGGTGCAGTATCAACCTGTTGAAGATACTGATGTTGGGTCGTCTTCATCATCATTGGCATCATCATGTTCTAGACCTGTACAAATCATCAAAGCTGCCGATTCTTCTTGTGGACTGGATCTGAATGTAGCTCTTGATGACTCTACACTGTCAAATGCCAGTGAGCTAAATGATGAAACCAGTCAATTGCTTGGGGTAAATAATGATGGTAACTTAACTAGAGATATCTCTAGTGAAATTTCCCAGGAGTCATCAAATGGATTTTGGCACGAAGCTAGTGAAAATTTTGATCAGGGACGACTTGTGGATGTCATTGTTGAAAATTTGGCATCTTCAGGTGTATATCACGTGTTGGAGACGGAACAGATAAATGTTGCAGAGGAGGCTACTTCCATGACTAACAATGGCAATGGAACTTCAAACAATCTGAATGAAGAGTGGGTAGATTTTGTTCCTAAGGCTGAAGATTATGATGCTACTATCTGCGATACAAGTCACGGATTGGAAAAATCTGAAACTGCCTTGATCGAGTCAGAAGACTCTGAAGTTCAAACAGTGTCTCAAGTTCAGGGGCTTACACTAAATGCTAAAGATCTTCAGACAGAATTTAATACTACACTAAATGCTGTAGATGAGATTGATGAGAATACGACTCTAGGCCAATATAATCCAGCCTGCAGTATTGATATGCTTGAGGAGACCATCGATGAAGCAAAAACAAATAAGAAAACCTTGTTTTCATCAATGGAATCTCTTATCAACTTGATGAGAGAGGTGGAACATCAGGAGAAACTTGCAGAGCAGGCCAATATAGCAGCGACCACCGGAGGGTTTGATATTCTAGATAGGGTAGATGAGTATCAAGCCATGTTGGTGCACGCTAAAGAAGCAAATGACATGCATGCTGGGGAAATTTATGGCGAAAAGGCAATTCTGGCGACTGAGCTGAAGGAACTTCAATCACGTCTGTCCAGCTTGTCTGGTGAAAGGGATGAGTCTCTTGCAATTCTTGATGAGATGCGCCAAAGTCTTGAATCTCGATTAGCTGCAGCAGAAATGTTGAGGAAAGCGGCAGAGCTTGAAAAGCTTGAAAAAGAGGAATCGGCAAGGGCTGCACTTCTAGAACAAGAAGCAATGATGGAGAAGGTAGTACAGGAATCACGGAGACTACAGCAGGAAGCTGAAGAGAATTCAAAGTGTCTGCCGCCGGAGAGGGAGGTTGAATTTTCTATTGATCTTGTTCCGGGAACGAAGCCTGTATCGATGACACCTTATCGTATGTCAGCTTCCGAGTTGGCTGAGTTGAAGAAACAGTTGGAGGATTTGCTTGATAAGAAGTTTATAAGACCAAGTGTTTCACCTTGGGGAGCGCCGGTATTGTTGGTTAAGAAGAAAGATGGTAGTATGAGCAAGATTGACTTGAGGTTCGGTTATCACCAAATTAAAGTAAAAGATGAAGATATGCAGAAGACGGCTTTTAGGACGCGATATGGACATTATGAATATAAGACAGAAGAAGAACATGCTGAGCATCTGAAAATTGTCTTGCAAGTGCTGAAAGAGAAGAAGCGTAGTGGTATTGCAGTGGATCCATCTAAAGTTGATGCGGTATCACGATGGGAGACTCCAAAGTCAGTTACTGAAGTTAGAAGCTTTTTGGGTTTGGCAGGTTACTATCGAAGGTTTATAGAAGGATTTTCTAAGTTAGCACTTCCGTTAACGCAGTTGACGTGTAAAGGTAAAATTTTTGTGTGGGATGTTCGGTGTGAGAACAGTTTTAATGAATTGAAGAAGCGTTTGACGACGGCTCCAATTTTGATTTTGCCGAAACCTGATGAACCTTTTGTGGTATATTGTGATGTGTCTAAATTGGGCTAG

Protein sequence

>Msa0076700

MGFNSVYRSLLDIFPQVDSRLLRAVAIEHSKDADMAAEVVLTEIIPAISKKLLPASPSRDTNPRVIVNLEDESESEDEGEILARHKLVKSMDVGSSSSHYVHREIIKSASSSSGPDLNVTVTSPQVKSPVAFINLEDESEDEGKRLVQYQPVEDTDVGSSSSSLASSCSRPVQIIKAADSSCGLDLNVALDDSTLSNASELNDETSQLLGVNNDGNLTRDISSEISQESSNGFWHEASENFDQGRLVDVIVENLASSGVYHVLETEQINVAEEATSMTNNGNGTSNNLNEEWVDFVPKAEDYDATICDTSHGLEKSETALIESEDSEVQTVSQVQGLTLNAKDLQTEFNTTLNAVDEIDENTTLGQYNPACSIDMLEETIDEAKTNKKTLFSSMESLINLMREVEHQEKLAEQANIAATTGGFDILDRVDEYQAMLVHAKEANDMHAGEIYGEKAILATELKELQSRLSSLSGERDESLAILDEMRQSLESRLAAAEMLRKAAELEKLEKEESARAALLEQEAMMEKVVQESRRLQQEAEENSKCLPPEREVEFSIDLVPGTKPVSMTPYRMSASELAELKKQLEDLLDKKFIRPSVSPWGAPVLLVKKKDGSMSKIDLRFGYHQIKVKDEDMQKTAFRTRYGHYEYKTEEEHAEHLKIVLQVLKEKKRSGIAVDPSKVDAVSRWETPKSVTEVRSFLGLAGYYRRFIEGFSKLALPLTQLTCKGKIFVWDVRCENSFNELKKRLTTAPILILPKPDEPFVVYCDVSKLG*