Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0076700 | sp|P92523|M860_ARATH | 43.956 | 91 | 50 | 1 | 671 | 761 | 43 | 132 | 1.53e-18 | 86.7 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0076700 | G7IEG2 | 92.599 | 554 | 31 | 3 | 1 | 545 | 1 | 553 | 0.0 | 912 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0029850 | Msa0076700 | 0.847237 | 1.313336e-59 | -8.615850e-47 |
Msa0034400 | Msa0076700 | 0.814155 | 1.779619e-51 | -8.615850e-47 |
Msa0064110 | Msa0076700 | 0.828298 | 9.715908e-55 | -8.615850e-47 |
Msa0076700 | Msa0077180 | 0.837292 | 5.665100e-57 | -8.615850e-47 |
Msa0076700 | Msa0083090 | 0.819288 | 1.256458e-52 | -8.615850e-47 |
Msa0076700 | Msa0085720 | 0.832190 | 1.088700e-55 | -8.615850e-47 |
Msa0076700 | Msa0090390 | 0.809080 | 2.257638e-50 | -8.615850e-47 |
Msa0076700 | Msa0092440 | 0.843651 | 1.229057e-58 | -8.615850e-47 |
Msa0076700 | Msa0119320 | 0.802816 | 4.688907e-49 | -8.615850e-47 |
Msa0076700 | Msa0124550 | 0.819360 | 1.210016e-52 | -8.615850e-47 |
Msa0076700 | Msa0125050 | 0.819661 | 1.033187e-52 | -8.615850e-47 |
Msa0076700 | Msa0137870 | 0.827790 | 1.287946e-54 | -8.615850e-47 |
Msa0076700 | Msa0138210 | 0.806560 | 7.752508e-50 | -8.615850e-47 |
Msa0076700 | Msa0138950 | 0.812846 | 3.452006e-51 | -8.615850e-47 |
Msa0076700 | Msa0140450 | 0.820818 | 5.609226e-53 | -8.615850e-47 |
Msa0076700 | Msa0144790 | 0.803018 | 4.257698e-49 | -8.615850e-47 |
Msa0076700 | Msa0169110 | 0.819939 | 8.923194e-53 | -8.615850e-47 |
Msa0076700 | Msa0169820 | 0.851805 | 6.987152e-61 | -8.615850e-47 |
Msa0076700 | Msa0175050 | 0.872152 | 3.961974e-67 | -8.615850e-47 |
Msa0076700 | Msa0175420 | 0.813410 | 2.595845e-51 | -8.615850e-47 |
Msa0076700 | Msa0178510 | 0.801680 | 8.031960e-49 | -8.615850e-47 |
Msa0076700 | Msa0183010 | -0.875365 | 3.262694e-68 | -8.615850e-47 |
Msa0076700 | Msa0188050 | 0.818814 | 1.610459e-52 | -8.615850e-47 |
Msa0076700 | Msa0190950 | 0.810637 | 1.043976e-50 | -8.615850e-47 |
Msa0076700 | Msa0193540 | 0.805801 | 1.120345e-49 | -8.615850e-47 |
Msa0076700 | Msa0194010 | 0.809199 | 2.129660e-50 | -8.615850e-47 |
Msa0076700 | Msa0195710 | 0.806789 | 6.934869e-50 | -8.615850e-47 |
Msa0076700 | Msa0198300 | 0.810463 | 1.138378e-50 | -8.615850e-47 |
Msa0076700 | Msa0199800 | -0.803409 | 3.534812e-49 | -8.615850e-47 |
Msa0076700 | Msa0222550 | 0.831983 | 1.224708e-55 | -8.615850e-47 |
Msa0076700 | Msa0227230 | 0.814075 | 1.852846e-51 | -8.615850e-47 |
Msa0076700 | Msa0230640 | -0.859982 | 2.836033e-63 | -8.615850e-47 |
Msa0076700 | Msa0231240 | 0.813503 | 2.476227e-51 | -8.615850e-47 |
Msa0076700 | Msa0233270 | 0.808370 | 3.202142e-50 | -8.615850e-47 |
Msa0076700 | Msa0235880 | 0.824745 | 6.832609e-54 | -8.615850e-47 |
Msa0076700 | Msa0239690 | 0.825849 | 3.746254e-54 | -8.615850e-47 |
Msa0076700 | Msa0266240 | 0.827416 | 1.583351e-54 | -8.615850e-47 |
Msa0076700 | Msa0269520 | 0.831716 | 1.425387e-55 | -8.615850e-47 |
Msa0076700 | Msa0271580 | 0.807043 | 6.129880e-50 | -8.615850e-47 |
Msa0076700 | Msa0274630 | 0.803409 | 3.534812e-49 | -8.615850e-47 |
Msa0076700 | Msa0287700 | 0.808594 | 2.868434e-50 | -8.615850e-47 |
Msa0076700 | Msa0292170 | 0.816527 | 5.282149e-52 | -8.615850e-47 |
Msa0076700 | Msa0301810 | 0.820891 | 5.396348e-53 | -8.615850e-47 |
Msa0076700 | Msa0304840 | 0.811864 | 5.657258e-51 | -8.615850e-47 |
Msa0076700 | Msa0311470 | 0.820287 | 7.428228e-53 | -8.615850e-47 |
Msa0076700 | Msa0314060 | 0.804983 | 1.662159e-49 | -8.615850e-47 |
Msa0076700 | Msa0323370 | 0.808212 | 3.459795e-50 | -8.615850e-47 |
Msa0076700 | Msa0330390 | 0.818997 | 1.463340e-52 | -8.615850e-47 |
Msa0076700 | Msa0341230 | 0.823668 | 1.223379e-53 | -8.615850e-47 |
Msa0076700 | Msa0347950 | 0.815277 | 1.004044e-51 | -8.615850e-47 |
Msa0076700 | Msa0347990 | 0.822964 | 1.786599e-53 | -8.615850e-47 |
Msa0076700 | Msa0377440 | 0.847837 | 8.978737e-60 | -8.615850e-47 |
Msa0076700 | Msa0388220 | 0.826675 | 2.381930e-54 | -8.615850e-47 |
Msa0076700 | Msa0390960 | 0.847453 | 1.145258e-59 | -8.615850e-47 |
Msa0076700 | Msa0417650 | 0.823315 | 1.479514e-53 | -8.615850e-47 |
Msa0076700 | Msa0417730 | 0.832967 | 6.986399e-56 | -8.615850e-47 |
Msa0076700 | Msa0429090 | 0.846002 | 2.854163e-59 | -8.615850e-47 |
Msa0076700 | Msa0430870 | 0.803944 | 2.737062e-49 | -8.615850e-47 |
Msa0076700 | Msa0436370 | 0.814210 | 1.730180e-51 | -8.615850e-47 |
Msa0076700 | Msa0458440 | 0.807125 | 5.888078e-50 | -8.615850e-47 |
Msa0076700 | Msa0467930 | 0.804076 | 2.569141e-49 | -8.615850e-47 |
Msa0076700 | Msa0469940 | -0.805391 | 1.365356e-49 | -8.615850e-47 |
Msa0076700 | Msa0475500 | 0.839141 | 1.892296e-57 | -8.615850e-47 |
Msa0076700 | Msa0517650 | 0.852684 | 3.928155e-61 | -8.615850e-47 |
Msa0076700 | Msa0557950 | -0.807891 | 4.049659e-50 | -8.615850e-47 |
Msa0076700 | Msa0559510 | 0.806609 | 7.569643e-50 | -8.615850e-47 |
Msa0076700 | Msa0573040 | 0.820138 | 8.034863e-53 | -8.615850e-47 |
Msa0076700 | Msa0574850 | 0.807796 | 4.243947e-50 | -8.615850e-47 |
Msa0076700 | Msa0594200 | 0.807746 | 4.349047e-50 | -8.615850e-47 |
Msa0076700 | Msa0612680 | -0.835934 | 1.256391e-56 | -8.615850e-47 |
Msa0076700 | Msa0613460 | 0.800463 | 1.424243e-48 | -8.615850e-47 |
Msa0076700 | Msa0621240 | 0.810661 | 1.031725e-50 | -8.615850e-47 |
Msa0076700 | Msa0622600 | 0.806070 | 9.832912e-50 | -8.615850e-47 |
Msa0076700 | Msa0624120 | 0.801057 | 1.077249e-48 | -8.615850e-47 |
Msa0076700 | Msa0625120 | 0.835517 | 1.602157e-56 | -8.615850e-47 |
Msa0076700 | Msa0626990 | 0.800094 | 1.693606e-48 | -8.615850e-47 |
Msa0076700 | Msa0653320 | -0.813687 | 2.255972e-51 | -8.615850e-47 |
Msa0076700 | Msa0654970 | 0.800433 | 1.444760e-48 | -8.615850e-47 |
Msa0076700 | Msa0689760 | 0.817121 | 3.887054e-52 | -8.615850e-47 |
Msa0076700 | Msa0698440 | 0.811906 | 5.537080e-51 | -8.615850e-47 |
Msa0076700 | Msa0714990 | 0.806648 | 7.427335e-50 | -8.615850e-47 |
Msa0076700 | Msa0724950 | 0.822638 | 2.128049e-53 | -8.615850e-47 |
Msa0076700 | Msa0757020 | 0.800369 | 1.488943e-48 | -8.615850e-47 |
Msa0076700 | Msa0763080 | 0.806715 | 7.190130e-50 | -8.615850e-47 |
Msa0076700 | Msa0773310 | 0.826849 | 2.164621e-54 | -8.615850e-47 |
Msa0076700 | Msa0780280 | 0.841143 | 5.679936e-58 | -8.615850e-47 |
Msa0076700 | Msa0794950 | 0.813254 | 2.809215e-51 | -8.615850e-47 |
Msa0076700 | Msa0810760 | 0.811472 | 6.882374e-51 | -8.615850e-47 |
Msa0076700 | Msa0821800 | 0.822923 | 1.826894e-53 | -8.615850e-47 |
Msa0076700 | Msa0831150 | 0.819796 | 9.623759e-53 | -8.615850e-47 |
Msa0076700 | Msa0836650 | 0.809046 | 2.295921e-50 | -8.615850e-47 |
Msa0076700 | Msa0845070 | 0.833777 | 4.388880e-56 | -8.615850e-47 |
Msa0076700 | Msa0861830 | 0.801840 | 7.448484e-49 | -8.615850e-47 |
Msa0076700 | Msa0881160 | 0.805542 | 1.269273e-49 | -8.615850e-47 |
Msa0076700 | Msa0903390 | 0.802486 | 5.484731e-49 | -8.615850e-47 |
Msa0076700 | Msa0945120 | 0.805234 | 1.472833e-49 | -8.615850e-47 |
Msa0076700 | Msa0968150 | 0.822244 | 2.627633e-53 | -8.615850e-47 |
Msa0076700 | Msa0981310 | 0.843211 | 1.610431e-58 | -8.615850e-47 |
Msa0076700 | Msa0983770 | 0.821855 | 3.234114e-53 | -8.615850e-47 |
Msa0076700 | Msa1006000 | 0.806918 | 6.514520e-50 | -8.615850e-47 |
Msa0076700 | Msa1077070 | 0.801784 | 7.646200e-49 | -8.615850e-47 |
Msa0076700 | Msa1098270 | 0.810110 | 1.356588e-50 | -8.615850e-47 |
Msa0076700 | Msa1109820 | 0.854203 | 1.439416e-61 | -8.615850e-47 |
Msa0076700 | Msa1133220 | 0.808080 | 3.691625e-50 | -8.615850e-47 |
Msa0076700 | Msa1133570 | 0.822132 | 2.789745e-53 | -8.615850e-47 |
Msa0076700 | Msa1152950 | 0.805225 | 1.479359e-49 | -8.615850e-47 |
Msa0076700 | Msa1174310 | 0.835410 | 1.705179e-56 | -8.615850e-47 |
Msa0076700 | Msa1205390 | 0.809034 | 2.310222e-50 | -8.615850e-47 |
Msa0076700 | Msa1215070 | 0.854408 | 1.255933e-61 | -8.615850e-47 |
Msa0076700 | Msa1220150 | 0.802207 | 6.258923e-49 | -8.615850e-47 |
Msa0076700 | Msa1222280 | 0.800710 | 1.268552e-48 | -8.615850e-47 |
Msa0076700 | Msa1224580 | -0.823563 | 1.295155e-53 | -8.615850e-47 |
Msa0076700 | Msa1225200 | 0.801113 | 1.049507e-48 | -8.615850e-47 |
Msa0076700 | Msa1227330 | 0.807317 | 5.362360e-50 | -8.615850e-47 |
Msa0076700 | Msa1229850 | 0.801013 | 1.099833e-48 | -8.615850e-47 |
Msa0076700 | Msa1235400 | 0.837705 | 4.439397e-57 | -8.615850e-47 |
Msa0076700 | Msa1241570 | 0.801720 | 7.881864e-49 | -8.615850e-47 |
Msa0076700 | Msa1263290 | -0.814406 | 1.565587e-51 | -8.615850e-47 |
Msa0076700 | Msa1307550 | 0.813208 | 2.874686e-51 | -8.615850e-47 |
Msa0076700 | Msa1314770 | 0.818150 | 2.278228e-52 | -8.615850e-47 |
Msa0076700 | Msa1333730 | 0.819656 | 1.035803e-52 | -8.615850e-47 |
Msa0076700 | Msa1335710 | 0.800827 | 1.200612e-48 | -8.615850e-47 |
Msa0076700 | Msa1341810 | 0.808111 | 3.636991e-50 | -8.615850e-47 |
Msa0076700 | Msa1349450 | 0.821577 | 3.749852e-53 | -8.615850e-47 |
Msa0076700 | Msa1359320 | 0.822709 | 2.049171e-53 | -8.615850e-47 |
Msa0076700 | Msa1359920 | 0.809317 | 2.008761e-50 | -8.615850e-47 |
Msa0076700 | Msa1360200 | 0.809239 | 2.087717e-50 | -8.615850e-47 |
Msa0076700 | Msa1360240 | 0.818763 | 1.654215e-52 | -8.615850e-47 |
Msa0076700 | Msa1372150 | 0.804720 | 1.886933e-49 | -8.615850e-47 |
Msa0076700 | Msa1373350 | 0.828823 | 7.254599e-55 | -8.615850e-47 |
Msa0076700 | Msa1376930 | 0.824731 | 6.884179e-54 | -8.615850e-47 |
Msa0076700 | Msa1379850 | 0.816662 | 4.926337e-52 | -8.615850e-47 |
Msa0076700 | Msa1391720 | 0.806051 | 9.923325e-50 | -8.615850e-47 |
Msa0076700 | Msa1400070 | 0.819699 | 1.012743e-52 | -8.615850e-47 |
Msa0076700 | Msa1404240 | -0.801430 | 9.036973e-49 | -8.615850e-47 |
Msa0076700 | Msa1407650 | 0.832852 | 7.460012e-56 | -8.615850e-47 |
Msa0076700 | Msa1420250 | 0.816117 | 6.524682e-52 | -8.615850e-47 |
Msa0076700 | Msa1422840 | 0.806388 | 8.425998e-50 | -8.615850e-47 |
Msa0076700 | Msa1426910 | 0.805880 | 1.078147e-49 | -8.615850e-47 |
Msa0076700 | Msa1433220 | 0.808405 | 3.147512e-50 | -8.615850e-47 |
Msa0076700 | Msa1435260 | 0.802323 | 5.923331e-49 | -8.615850e-47 |
Msa0076700 | Msa1445220 | 0.816330 | 5.847595e-52 | -8.615850e-47 |
Msa0076700 | Msa1447150 | 0.807967 | 3.902505e-50 | -8.615850e-47 |
Msa0076700 | Msa1461710 | 0.804820 | 1.798265e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0076700 | MtrunA17_Chr1g0185771 | 92.405 | 553 | 32 | 3 | 1 | 544 | 1 | 552 | 0.0 | 911 |
Msa0076700 | MtrunA17_Chr2g0306241 | 60.465 | 344 | 36 | 3 | 527 | 770 | 2 | 345 | 4.61e-127 | 390 |
Msa0076700 | MtrunA17_Chr6g0475571 | 66.447 | 304 | 23 | 3 | 546 | 770 | 146 | 449 | 9.51e-126 | 392 |
Msa0076700 | MtrunA17_Chr1g0175041 | 63.385 | 325 | 19 | 3 | 546 | 770 | 522 | 846 | 2.48e-123 | 390 |
Msa0076700 | MtrunA17_Chr3g0096731 | 63.077 | 325 | 20 | 3 | 546 | 770 | 268 | 592 | 5.54e-123 | 382 |
Msa0076700 | MtrunA17_Chr6g0478941 | 63.385 | 325 | 19 | 3 | 546 | 770 | 132 | 456 | 1.44e-121 | 387 |
Msa0076700 | MtrunA17_Chr1g0170491 | 63.692 | 325 | 18 | 3 | 546 | 770 | 507 | 831 | 5.06e-121 | 390 |
Msa0076700 | MtrunA17_Chr6g0452431 | 63.385 | 325 | 19 | 3 | 546 | 770 | 429 | 753 | 5.67e-121 | 389 |
Msa0076700 | MtrunA17_Chr2g0306051 | 62.883 | 326 | 20 | 3 | 546 | 770 | 474 | 799 | 6.71e-121 | 387 |
Msa0076700 | MtrunA17_Chr3g0105561 | 62.769 | 325 | 21 | 3 | 546 | 770 | 98 | 422 | 5.36e-120 | 386 |
Msa0076700 | MtrunA17_Chr8g0367821 | 62.300 | 313 | 18 | 3 | 546 | 758 | 132 | 444 | 9.82e-120 | 367 |
Msa0076700 | MtrunA17_Chr0c01g0489031 | 63.077 | 325 | 20 | 3 | 546 | 770 | 507 | 831 | 1.45e-119 | 382 |
Msa0076700 | MtrunA17_Chr2g0306271 | 62.462 | 325 | 22 | 3 | 546 | 770 | 507 | 831 | 7.15e-119 | 379 |
Msa0076700 | MtrunA17_Chr4g0044301 | 63.692 | 325 | 18 | 3 | 546 | 770 | 507 | 831 | 8.31e-119 | 390 |
Msa0076700 | MtrunA17_Chr8g0363431 | 63.385 | 325 | 19 | 3 | 546 | 770 | 549 | 873 | 2.90e-118 | 388 |
Msa0076700 | MtrunA17_Chr4g0018081 | 63.551 | 321 | 17 | 3 | 550 | 770 | 409 | 729 | 3.19e-118 | 382 |
Msa0076700 | MtrunA17_Chr1g0170501 | 61.846 | 325 | 24 | 3 | 546 | 770 | 323 | 647 | 3.39e-118 | 375 |
Msa0076700 | MtrunA17_Chr4g0053141 | 63.385 | 325 | 19 | 3 | 546 | 770 | 507 | 831 | 4.21e-118 | 388 |
Msa0076700 | MtrunA17_Chr1g0172201 | 61.231 | 325 | 26 | 3 | 546 | 770 | 46 | 370 | 6.59e-118 | 375 |
Msa0076700 | MtrunA17_Chr2g0306511 | 62.462 | 325 | 22 | 3 | 546 | 770 | 507 | 831 | 8.03e-118 | 384 |
Msa0076700 | MtrunA17_Chr4g0019441 | 62.462 | 325 | 22 | 3 | 546 | 770 | 483 | 807 | 4.60e-117 | 385 |
Msa0076700 | MtrunA17_Chr2g0306251 | 62.154 | 325 | 23 | 3 | 546 | 770 | 366 | 690 | 8.24e-116 | 380 |
Msa0076700 | MtrunA17_Chr5g0422121 | 57.282 | 309 | 48 | 4 | 546 | 770 | 497 | 805 | 3.23e-100 | 338 |
Msa0076700 | MtrunA17_Chr2g0313291 | 58.824 | 221 | 27 | 2 | 614 | 770 | 10 | 230 | 7.97e-78 | 251 |
Msa0076700 | MtrunA17_Chr7g0231051 | 68.571 | 140 | 8 | 1 | 546 | 649 | 535 | 674 | 9.36e-50 | 186 |
Msa0076700 | MtrunA17_Chr4g0041691 | 30.457 | 394 | 177 | 8 | 464 | 770 | 525 | 908 | 2.26e-45 | 176 |
Msa0076700 | MtrunA17_Chr3g0096001 | 33.846 | 325 | 115 | 3 | 546 | 770 | 452 | 776 | 2.55e-44 | 172 |
Msa0076700 | MtrunA17_Chr6g0470931 | 73.404 | 94 | 25 | 0 | 669 | 762 | 39 | 132 | 1.38e-42 | 151 |
Msa0076700 | MtrunA17_Chr6g0472401 | 31.385 | 325 | 122 | 4 | 546 | 770 | 100 | 423 | 1.26e-40 | 161 |
Msa0076700 | MtrunA17_Chr3g0084281 | 35.052 | 291 | 88 | 4 | 540 | 730 | 553 | 842 | 5.73e-39 | 155 |
Msa0076700 | MtrunA17_Chr4g0020701 | 88.158 | 76 | 8 | 1 | 546 | 620 | 486 | 561 | 1.07e-34 | 139 |
Msa0076700 | MtrunA17_Chr4g0027911 | 80.952 | 84 | 13 | 1 | 546 | 629 | 268 | 348 | 1.14e-34 | 142 |
Msa0076700 | MtrunA17_Chr2g0313281 | 89.855 | 69 | 7 | 0 | 546 | 614 | 433 | 501 | 2.45e-34 | 138 |
Msa0076700 | MtrunA17_Chr8g0358641 | 61.607 | 112 | 7 | 1 | 549 | 624 | 509 | 620 | 2.34e-30 | 127 |
Msa0076700 | MtrunA17_Chr1g0158081 | 24.100 | 361 | 168 | 8 | 510 | 766 | 693 | 1051 | 2.24e-16 | 84.3 |
Msa0076700 | MtrunA17_Chr7g0226861 | 47.059 | 68 | 36 | 0 | 546 | 613 | 559 | 626 | 7.89e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0076700 | AT4G02880.2 | 60.733 | 191 | 70 | 1 | 354 | 544 | 263 | 448 | 3.51e-60 | 213 |
Msa0076700 | AT4G02880.2 | 39.623 | 106 | 61 | 2 | 1 | 104 | 1 | 105 | 9.15e-13 | 72.0 |
Msa0076700 | AT1G03290.6 | 65.517 | 174 | 60 | 0 | 371 | 544 | 231 | 404 | 3.96e-60 | 212 |
Msa0076700 | AT1G03290.6 | 71.698 | 53 | 15 | 0 | 1 | 53 | 1 | 53 | 1.07e-16 | 84.3 |
Msa0076700 | AT4G02880.1 | 60.733 | 191 | 70 | 1 | 354 | 544 | 259 | 444 | 4.07e-60 | 213 |
Msa0076700 | AT4G02880.1 | 55.357 | 56 | 25 | 0 | 1 | 56 | 1 | 56 | 1.90e-12 | 71.2 |
Msa0076700 | AT1G03290.5 | 65.517 | 174 | 60 | 0 | 371 | 544 | 253 | 426 | 6.09e-60 | 212 |
Msa0076700 | AT1G03290.5 | 71.698 | 53 | 15 | 0 | 1 | 53 | 1 | 53 | 1.22e-16 | 84.3 |
Msa0076700 | AT1G03290.3 | 65.517 | 174 | 60 | 0 | 371 | 544 | 283 | 456 | 9.75e-60 | 212 |
Msa0076700 | AT1G03290.3 | 71.698 | 53 | 15 | 0 | 1 | 53 | 1 | 53 | 1.54e-16 | 84.3 |
Msa0076700 | AT1G03290.2 | 65.517 | 174 | 60 | 0 | 371 | 544 | 283 | 456 | 9.75e-60 | 212 |
Msa0076700 | AT1G03290.2 | 71.698 | 53 | 15 | 0 | 1 | 53 | 1 | 53 | 1.54e-16 | 84.3 |
Msa0076700 | AT1G03290.4 | 65.517 | 174 | 60 | 0 | 371 | 544 | 283 | 456 | 9.75e-60 | 212 |
Msa0076700 | AT1G03290.4 | 71.698 | 53 | 15 | 0 | 1 | 53 | 1 | 53 | 1.54e-16 | 84.3 |
Msa0076700 | AT1G03290.1 | 65.517 | 174 | 60 | 0 | 371 | 544 | 283 | 456 | 9.75e-60 | 212 |
Msa0076700 | AT1G03290.1 | 71.698 | 53 | 15 | 0 | 1 | 53 | 1 | 53 | 1.54e-16 | 84.3 |
Msa0076700 | ATMG00860.1 | 43.956 | 91 | 50 | 1 | 671 | 761 | 43 | 132 | 1.55e-19 | 86.7 |
Msa0076700 | AT5G64980.1 | 63.043 | 46 | 17 | 0 | 1 | 46 | 1 | 46 | 3.83e-12 | 68.9 |
Msa0076700 | AT5G64980.2 | 63.043 | 46 | 17 | 0 | 1 | 46 | 1 | 46 | 3.83e-12 | 68.9 |
Find 174 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGCATGCTGGGGAAATTTA+TGG | 0.158311 | 1_2:+52981294 | Msa0076700:intron |
TGAAGATGAAGGGGAGATTT+TGG | 0.214160 | 1_2:+52979743 | Msa0076700:CDS |
AGGAGTCATCAAATGGATTT+TGG | 0.236134 | 1_2:+52980294 | Msa0076700:CDS |
GGATGTCATTGTTGAAAATT+TGG | 0.236630 | 1_2:+52980355 | Msa0076700:CDS |
ATATTGTGATGTGTCTAAAT+TGG | 0.275730 | 1_2:+52983072 | Msa0076700:CDS |
GGTTTCGGCAAAATCAAAAT+TGG | 0.278558 | 1_2:-52983031 | None:intergenic |
TCCGGTGGTCGCTGCTATAT+TGG | 0.280747 | 1_2:-52981088 | None:intergenic |
GTTGAAAATTTGGCATCTTC+AGG | 0.284090 | 1_2:+52980365 | Msa0076700:CDS |
TGCCTGTATAGGTGGATTCC+AGG | 0.290736 | 1_2:+52979455 | Msa0076700:intron |
TCAAACAGTGTCTCAAGTTC+AGG | 0.292873 | 1_2:+52980598 | Msa0076700:CDS |
TTACACGTCAACTGCGTTAA+CGG | 0.315601 | 1_2:-52982935 | None:intergenic |
TTATGGCGAAAAGGCAATTC+TGG | 0.316460 | 1_2:+52981311 | Msa0076700:CDS |
ATCGATACAGGCTTCGTTCC+CGG | 0.320921 | 1_2:-52982166 | None:intergenic |
GTTATTATTTCCAGACTCAT+AGG | 0.323264 | 1_2:+52978136 | None:intergenic |
TCATAAGCTTGTTAAAAGTA+TGG | 0.338734 | 1_2:+52979770 | Msa0076700:CDS |
GAGGGTTTGATATTCTAGAT+AGG | 0.355256 | 1_2:+52981109 | Msa0076700:CDS |
TACTGCAGGCTGGATTATAT+TGG | 0.370799 | 1_2:-52980709 | None:intergenic |
ATATGGACATTATGAATATA+AGG | 0.375845 | 1_2:+52982519 | Msa0076700:CDS |
ACACTCGAAGGATGCTGATA+TGG | 0.376751 | 1_2:+52979501 | Msa0076700:CDS |
CTAACTTCAGTAACTGACTT+TGG | 0.384260 | 1_2:-52982848 | None:intergenic |
TACTATCGAAGGTTTATAGA+AGG | 0.384450 | 1_2:+52982893 | Msa0076700:CDS |
AAGACCAAGTGTTTCACCTT+GGG | 0.389941 | 1_2:+52982267 | Msa0076700:CDS |
GTTACTGTAACATTCAGATC+TGG | 0.391606 | 1_2:-52979861 | None:intergenic |
TCACGTCTGTCCAGCTTGTC+TGG | 0.392930 | 1_2:+52981357 | Msa0076700:CDS |
TTCTTCACATTATGTACATC+GGG | 0.399469 | 1_2:+52979806 | Msa0076700:CDS |
CGATAAGGTGTCATCGATAC+AGG | 0.401208 | 1_2:-52982178 | None:intergenic |
AAATCTGCCAGCTCTTCTTC+TGG | 0.403009 | 1_2:+52979837 | Msa0076700:CDS |
GATACCGCATCAACTTTAGA+TGG | 0.403409 | 1_2:-52982812 | None:intergenic |
GTAGCATTTATAAACCTTGA+AGG | 0.403669 | 1_2:+52979906 | Msa0076700:CDS |
TAAAAGTAGACTCACCTTCC+AGG | 0.411888 | 1_2:-52979621 | None:intergenic |
TCAAGGTTTATAAATGCTAC+AGG | 0.412424 | 1_2:-52979903 | None:intergenic |
ATGAAACCAGTCAATTGCTT+GGG | 0.419864 | 1_2:+52980222 | Msa0076700:CDS |
GATGAGAGAGGTGGAACATC+AGG | 0.426615 | 1_2:+52981047 | Msa0076700:CDS |
ACAAAAGGTTCATCAGGTTT+CGG | 0.427755 | 1_2:-52983046 | None:intergenic |
ACGCAATTTCCCTATGAGTC+TGG | 0.428884 | 1_2:-52978146 | None:intergenic |
TTCCAGGTTGTTGAGGGCAG+TGG | 0.430937 | 1_2:+52979471 | Msa0076700:CDS |
CCCTAGAGTCATAGTGAACC+TGG | 0.434969 | 1_2:+52979603 | Msa0076700:CDS |
TTGGGGAGCGCCGGTATTGT+TGG | 0.435378 | 1_2:+52982285 | Msa0076700:CDS |
AAGAATATGATTATATAAGT+AGG | 0.439675 | 1_2:-52978248 | None:intergenic |
TACTTCCAGCATCCCCTTCA+CGG | 0.443418 | 1_2:+52979572 | Msa0076700:CDS |
CCAGGTTCACTATGACTCTA+GGG | 0.446067 | 1_2:-52979603 | None:intergenic |
GCATCATAATCTTCAGCCTT+AGG | 0.448094 | 1_2:-52980503 | None:intergenic |
AAAATCCATTTGATGACTCC+TGG | 0.449156 | 1_2:-52980292 | None:intergenic |
AGCAAGATTGACTTGAGGTT+CGG | 0.449260 | 1_2:+52982439 | Msa0076700:intron |
TATACCACAAAAGGTTCATC+AGG | 0.450180 | 1_2:-52983052 | None:intergenic |
TCAGGAGAAACTTGCAGAGC+AGG | 0.457789 | 1_2:+52981065 | Msa0076700:CDS |
GGTGGATTCCAGGTTGTTGA+GGG | 0.458095 | 1_2:+52979465 | Msa0076700:intron |
GAAAGTGAAAGTGAAGATGA+AGG | 0.459096 | 1_2:+52979732 | Msa0076700:CDS |
ATTTCCCAGGAGTCATCAAA+TGG | 0.460582 | 1_2:+52980287 | Msa0076700:CDS |
GTCCAGCTTGTCTGGTGAAA+GGG | 0.461081 | 1_2:+52981365 | Msa0076700:CDS |
GGCTGCGGAAGTTGTTCTTA+CGG | 0.467393 | 1_2:+52979522 | Msa0076700:CDS |
ATCCCTTTCACCAGACAAGC+TGG | 0.471279 | 1_2:-52981367 | None:intergenic |
TCCATTGCCATTGTTAGTCA+TGG | 0.473377 | 1_2:-52980441 | None:intergenic |
TGTCCAGCTTGTCTGGTGAA+AGG | 0.474114 | 1_2:+52981364 | Msa0076700:CDS |
TGCCGATTCTTCTTGTGGAC+TGG | 0.474130 | 1_2:+52980145 | Msa0076700:CDS |
ATCCAGTCCACAAGAAGAAT+CGG | 0.478136 | 1_2:-52980147 | None:intergenic |
TTAACGCAGTTGACGTGTAA+AGG | 0.481737 | 1_2:+52982938 | Msa0076700:CDS |
CTGCGATACAAGTCACGGAT+TGG | 0.483106 | 1_2:+52980532 | Msa0076700:CDS |
TATTGTGATGTGTCTAAATT+GGG | 0.485653 | 1_2:+52983073 | Msa0076700:CDS |
AGAATATGATTATATAAGTA+GGG | 0.487469 | 1_2:-52978247 | None:intergenic |
GGTTTCATCATTTAGCTCAC+TGG | 0.490778 | 1_2:-52980207 | None:intergenic |
TCTAGAACAAGAAGCAATGA+TGG | 0.490819 | 1_2:+52981710 | Msa0076700:CDS |
CTAATCGAGATTCAAGACTT+TGG | 0.492088 | 1_2:-52981614 | None:intergenic |
ACATCACAATATACCACAAA+AGG | 0.492479 | 1_2:-52983061 | None:intergenic |
TACGTCAAATCGTCTCATCA+TGG | 0.495561 | 1_2:+52978465 | Msa0076700:exon |
TCCAGGTTCACTATGACTCT+AGG | 0.497671 | 1_2:-52979604 | None:intergenic |
GATGAAACCAGTCAATTGCT+TGG | 0.498096 | 1_2:+52980221 | Msa0076700:CDS |
TTCTTCTTAACCAACAATAC+CGG | 0.498708 | 1_2:-52982295 | None:intergenic |
AGAAAGTGAACAAACCTTCA+AGG | 0.498899 | 1_2:-52979920 | None:intergenic |
ATCTGGGCCAGAAGAAGAGC+TGG | 0.501030 | 1_2:-52979844 | None:intergenic |
AATGATGGAGAAGGTAGTAC+AGG | 0.501842 | 1_2:+52981725 | Msa0076700:CDS |
GAAGTGTCTGCCGCCGGAGA+GGG | 0.504994 | 1_2:+52982117 | Msa0076700:intron |
TGGGTCGTCTTCATCATCAT+TGG | 0.505413 | 1_2:+52980085 | Msa0076700:CDS |
AAAGCGAGGATGAAGGGAAA+AGG | 0.505775 | 1_2:+52980027 | Msa0076700:CDS |
GAAAATTCAACCTCCCTCTC+CGG | 0.506382 | 1_2:-52982130 | None:intergenic |
AAAGCTGCCGATTCTTCTTG+TGG | 0.507371 | 1_2:+52980140 | Msa0076700:CDS |
ATTTACCCCAAGCAATTGAC+TGG | 0.507418 | 1_2:-52980228 | None:intergenic |
CCAACATCAGTATCTTCAAC+AGG | 0.508842 | 1_2:-52980065 | None:intergenic |
CCTAAAATAGAATTAAGAAC+GGG | 0.510453 | 1_2:-52978292 | None:intergenic |
TCAGATGAAAGCGAGGATGA+AGG | 0.511685 | 1_2:+52980020 | Msa0076700:intron |
AAAGTGAAAGTGAAGATGAA+GGG | 0.512917 | 1_2:+52979733 | Msa0076700:CDS |
ACTTCCAGCATCCCCTTCAC+GGG | 0.513246 | 1_2:+52979573 | Msa0076700:CDS |
GTATCCCGTGAAGGGGATGC+TGG | 0.514200 | 1_2:-52979577 | None:intergenic |
AGGTGGATTCCAGGTTGTTG+AGG | 0.514430 | 1_2:+52979464 | Msa0076700:intron |
CTTCTTCACATTATGTACAT+CGG | 0.516869 | 1_2:+52979805 | Msa0076700:CDS |
TTGTTGGTTAAGAAGAAAGA+TGG | 0.517031 | 1_2:+52982301 | Msa0076700:CDS |
GCCAATATAGCAGCGACCAC+CGG | 0.517149 | 1_2:+52981087 | Msa0076700:CDS |
GCAGCTTTGATGATTTGTAC+AGG | 0.517673 | 1_2:-52980125 | None:intergenic |
AGGGTTTGATATTCTAGATA+GGG | 0.517722 | 1_2:+52981110 | Msa0076700:CDS |
AGAGTCTTCTGACTCGATCA+AGG | 0.518967 | 1_2:-52980570 | None:intergenic |
GTGTCTGCCGCCGGAGAGGG+AGG | 0.519920 | 1_2:+52982120 | Msa0076700:intron |
TGGGGAAATTTATGGCGAAA+AGG | 0.520761 | 1_2:+52981302 | Msa0076700:CDS |
TGTTTCACCTTGGGGAGCGC+CGG | 0.520848 | 1_2:+52982276 | Msa0076700:CDS |
CAAACAGTGTCTCAAGTTCA+GGG | 0.526735 | 1_2:+52980599 | Msa0076700:CDS |
TTATTATTTCCAGACTCATA+GGG | 0.528143 | 1_2:+52978137 | None:intergenic |
CAGATGAAAGCGAGGATGAA+GGG | 0.528971 | 1_2:+52980021 | Msa0076700:intron |
AGCATATCAATACTGCAGGC+TGG | 0.534938 | 1_2:-52980719 | None:intergenic |
TTGCTTGGGGTAAATAATGA+TGG | 0.536969 | 1_2:+52980236 | Msa0076700:CDS |
AGCCACTGCCCTCAACAACC+TGG | 0.540659 | 1_2:-52979473 | None:intergenic |
TAAGACCAAGTGTTTCACCT+TGG | 0.542984 | 1_2:+52982266 | Msa0076700:CDS |
CTTGTTAAAAGTATGGATGT+TGG | 0.543919 | 1_2:+52979777 | Msa0076700:CDS |
TAGGGTTTGTATCCCGTGAA+GGG | 0.545390 | 1_2:-52979585 | None:intergenic |
CTCAAGCATATCAATACTGC+AGG | 0.545954 | 1_2:-52980723 | None:intergenic |
TTACTGTAACATTCAGATCT+GGG | 0.548270 | 1_2:-52979860 | None:intergenic |
TCCATGACTAACAATGGCAA+TGG | 0.550339 | 1_2:+52980440 | Msa0076700:CDS |
AGAAGAAAGATGGTAGTATG+AGG | 0.551035 | 1_2:+52982311 | Msa0076700:CDS |
AAATCCATTTGATGACTCCT+GGG | 0.552827 | 1_2:-52980291 | None:intergenic |
CGCGTGCAACAATTAACACT+AGG | 0.557347 | 1_2:+52978180 | Msa0076700:five_prime_UTR |
ATCTAGAATATCAAACCCTC+CGG | 0.557961 | 1_2:-52981106 | None:intergenic |
TTCTTTAGCGTGCACCAACA+TGG | 0.558785 | 1_2:-52981148 | None:intergenic |
GGCTGAGTTGAAGAAACAGT+TGG | 0.559250 | 1_2:+52982219 | Msa0076700:CDS |
CAAACAATCTGAATGAAGAG+TGG | 0.561365 | 1_2:+52980468 | Msa0076700:CDS |
GGAAGCTGAAGAGAATTCAA+AGG | 0.561722 | 1_2:+52981767 | Msa0076700:CDS |
CTCTAGTAGTGGTATTGCAG+TGG | 0.562177 | 1_2:+52982787 | Msa0076700:intron |
TTTCTTCAACTCAGCCAACT+CGG | 0.562291 | 1_2:-52982212 | None:intergenic |
TGATGTGTCTAAATTGGGCT+AGG | 0.563515 | 1_2:+52983078 | Msa0076700:CDS |
ACGTCAAATCGTCTCATCAT+GGG | 0.564406 | 1_2:+52978466 | Msa0076700:exon |
GTTTGGCAGGTTACTATCGA+AGG | 0.566767 | 1_2:+52982882 | Msa0076700:CDS |
AATTCTGGCGACTGAGCTGA+AGG | 0.568587 | 1_2:+52981326 | Msa0076700:CDS |
AAACAATCTGAATGAAGAGT+GGG | 0.568659 | 1_2:+52980469 | Msa0076700:CDS |
TATCTCTAGTGAAATTTCCC+AGG | 0.568889 | 1_2:+52980274 | Msa0076700:CDS |
AGATGAAGATATGCAGAAGA+CGG | 0.568974 | 1_2:+52982483 | Msa0076700:CDS |
CAAGGTTTATAAATGCTACA+GGG | 0.573009 | 1_2:-52979902 | None:intergenic |
ATTGATGAGAATACGACTCT+AGG | 0.573030 | 1_2:+52980686 | Msa0076700:CDS |
TTCAGGTGTATATCACGTGT+TGG | 0.574166 | 1_2:+52980382 | Msa0076700:CDS |
ACAAGAAGCAATGATGGAGA+AGG | 0.575425 | 1_2:+52981716 | Msa0076700:CDS |
ACAGATAAATGTTGCAGAGG+AGG | 0.575696 | 1_2:+52980412 | Msa0076700:CDS |
AAGTGAAAGTGAAGATGAAG+GGG | 0.577481 | 1_2:+52979734 | Msa0076700:CDS |
AGTTGATGCGGTATCACGAT+GGG | 0.580665 | 1_2:+52982820 | Msa0076700:CDS |
AACAATACCGGCGCTCCCCA+AGG | 0.581284 | 1_2:-52982283 | None:intergenic |
CTAGGGTTTGTATCCCGTGA+AGG | 0.582518 | 1_2:-52979586 | None:intergenic |
TCGGAAGCTGACATACGATA+AGG | 0.582759 | 1_2:-52982193 | None:intergenic |
GTCTCTTGCAATTCTTGATG+AGG | 0.585007 | 1_2:+52981392 | Msa0076700:CDS |
ACCTAAAATAGAATTAAGAA+CGG | 0.588624 | 1_2:-52978293 | None:intergenic |
AGCAGAAATGTTGAGGAAAG+CGG | 0.595016 | 1_2:+52981641 | Msa0076700:CDS |
CGCTAAAGAAGCAAATGACA+TGG | 0.595563 | 1_2:+52981161 | Msa0076700:CDS |
TCGTATGTCAGCTTCCGAGT+TGG | 0.599897 | 1_2:+52982198 | Msa0076700:CDS |
CTGTTGAAGATACTGATGTT+GGG | 0.601353 | 1_2:+52980066 | Msa0076700:CDS |
CCTGTTGAAGATACTGATGT+TGG | 0.601909 | 1_2:+52980065 | Msa0076700:CDS |
AGATTCCATTGATGAAAACA+AGG | 0.603118 | 1_2:-52981013 | None:intergenic |
GCTCCCCAAGGTGAAACACT+TGG | 0.603144 | 1_2:-52982271 | None:intergenic |
TGAGTTGAAGAAACAGTTGG+AGG | 0.605829 | 1_2:+52982222 | Msa0076700:CDS |
CGAGGATGAAGGGAAAAGGT+TGG | 0.606782 | 1_2:+52980031 | Msa0076700:CDS |
GAAGGATGCTGATATGGCTG+CGG | 0.608075 | 1_2:+52979507 | Msa0076700:CDS |
ATTGAAGAAGCGTTTGACGA+CGG | 0.608751 | 1_2:+52983006 | Msa0076700:CDS |
AATATAGCAGCGACCACCGG+AGG | 0.613783 | 1_2:+52981090 | Msa0076700:CDS |
GGAAGTGTCTGCCGCCGGAG+AGG | 0.615297 | 1_2:+52982116 | Msa0076700:intron |
AGATGAGTATCAAGCCATGT+TGG | 0.617399 | 1_2:+52981134 | Msa0076700:CDS |
AGGGTTTGTATCCCGTGAAG+GGG | 0.617974 | 1_2:-52979584 | None:intergenic |
TATCAACTTGATGAGAGAGG+TGG | 0.618003 | 1_2:+52981038 | Msa0076700:CDS |
GGAATCACGGAGACTACAGC+AGG | 0.619130 | 1_2:+52981746 | Msa0076700:CDS |
AAGTGCTGAAAGAGAAGAAG+CGG | 0.619261 | 1_2:+52982703 | Msa0076700:CDS |
TAGCTGCAGCAGAAATGTTG+AGG | 0.619883 | 1_2:+52981634 | Msa0076700:CDS |
TAGAATATCAAACCCTCCGG+TGG | 0.620228 | 1_2:-52981103 | None:intergenic |
CTGCAGTATTGATATGCTTG+AGG | 0.622883 | 1_2:+52980724 | Msa0076700:CDS |
AGACCAAGTGTTTCACCTTG+GGG | 0.624119 | 1_2:+52982268 | Msa0076700:CDS |
GCTACTTCCATGACTAACAA+TGG | 0.625453 | 1_2:+52980434 | Msa0076700:CDS |
AGAAGGTAGTACAGGAATCA+CGG | 0.625668 | 1_2:+52981733 | Msa0076700:CDS |
TGTATATCACGTGTTGGAGA+CGG | 0.626009 | 1_2:+52980388 | Msa0076700:CDS |
AGAGTCATAGTGAACCTGGA+AGG | 0.630016 | 1_2:+52979607 | Msa0076700:CDS |
AAACAGTGTCTCAAGTTCAG+GGG | 0.648434 | 1_2:+52980600 | Msa0076700:CDS |
TCTTATCAACTTGATGAGAG+AGG | 0.649092 | 1_2:+52981035 | Msa0076700:CDS |
AAGTTGATGCGGTATCACGA+TGG | 0.650005 | 1_2:+52982819 | Msa0076700:CDS |
TGAATCTTCAGATGAAAGCG+AGG | 0.654788 | 1_2:+52980013 | Msa0076700:intron |
GATTAGTGAAAGAGTGTGTG+TGG | 0.659566 | 1_2:-52978209 | None:intergenic |
ATATAGCAGCGACCACCGGA+GGG | 0.663604 | 1_2:+52981091 | Msa0076700:CDS |
AGTGGCTATTGAACACTCGA+AGG | 0.665070 | 1_2:+52979489 | Msa0076700:CDS |
GGAACAGATAAATGTTGCAG+AGG | 0.665164 | 1_2:+52980409 | Msa0076700:CDS |
GGATCCATCTAAAGTTGATG+CGG | 0.667035 | 1_2:+52982808 | Msa0076700:CDS |
TGAAACCAGTCAATTGCTTG+GGG | 0.667240 | 1_2:+52980223 | Msa0076700:CDS |
TGTTCAGCAAGATTGACTTG+AGG | 0.667954 | 1_2:+52982434 | Msa0076700:intron |
ACTATCTGCGATACAAGTCA+CGG | 0.668223 | 1_2:+52980527 | Msa0076700:CDS |
AATTCAACCTCCCTCTCCGG+CGG | 0.695090 | 1_2:-52982127 | None:intergenic |
ATTAGTGAAAGAGTGTGTGT+GGG | 0.716034 | 1_2:-52978208 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATATCTCTTTAATATATT+TGG | - | chr1_2:52979373-52979392 | None:intergenic | 10.0% |
!! | TATTAAATTATTCAAAACAA+TGG | - | chr1_2:52980876-52980895 | None:intergenic | 10.0% |
!!! | TTTTTCATTTCAAAATAAAT+AGG | + | chr1_2:52981474-52981493 | Msa0076700:intron | 10.0% |
!! | AGAATATGATTATATAAGTA+GGG | - | chr1_2:52978250-52978269 | None:intergenic | 15.0% |
!! | AAGAATATGATTATATAAGT+AGG | - | chr1_2:52978251-52978270 | None:intergenic | 15.0% |
!! | TATAACTATTACTTTCTTAT+TGG | + | chr1_2:52979000-52979019 | Msa0076700:intron | 15.0% |
!! | ATAACTATTACTTTCTTATT+GGG | + | chr1_2:52979001-52979020 | Msa0076700:intron | 15.0% |
!! | ATTTCACTGTTATTATTTAA+TGG | + | chr1_2:52981540-52981559 | Msa0076700:intron | 15.0% |
!! | TTTACAGAAATATAATGAAA+TGG | - | chr1_2:52981819-52981838 | None:intergenic | 15.0% |
!!! | ATTGTTAAAATAACTTTTAG+TGG | + | chr1_2:52981969-52981988 | Msa0076700:intron | 15.0% |
!!! | TTGTTAAAATAACTTTTAGT+GGG | + | chr1_2:52981970-52981989 | Msa0076700:intron | 15.0% |
!! | ACCTAAAATAGAATTAAGAA+CGG | - | chr1_2:52978296-52978315 | None:intergenic | 20.0% |
!! | ATCTACAATCATAATTGAAT+AGG | - | chr1_2:52978548-52978567 | None:intergenic | 20.0% |
!! | ATACAAATAAAACATGATCA+CGG | - | chr1_2:52978624-52978643 | None:intergenic | 20.0% |
!!! | ATCATGTTTTATTTGTATTC+TGG | + | chr1_2:52978626-52978645 | Msa0076700:intron | 20.0% |
!!! | TAAATTTAACTTTCTACCTA+AGG | + | chr1_2:52978714-52978733 | Msa0076700:intron | 20.0% |
!! | TAAACAAAAATACTAACTTG+AGG | + | chr1_2:52978914-52978933 | Msa0076700:intron | 20.0% |
!! | TAACTATTACTTTCTTATTG+GGG | + | chr1_2:52979002-52979021 | Msa0076700:intron | 20.0% |
!! | ATATTAAAGAGATATTACAC+TGG | + | chr1_2:52979376-52979395 | Msa0076700:intron | 20.0% |
!! | TATTAAAGAGATATTACACT+GGG | + | chr1_2:52979377-52979396 | Msa0076700:intron | 20.0% |
!!! | GTAATTTTTTAGAAATTGCT+GGG | - | chr1_2:52979555-52979574 | None:intergenic | 20.0% |
!!! | AGTAATTTTTTAGAAATTGC+TGG | - | chr1_2:52979556-52979575 | None:intergenic | 20.0% |
!! | AGTTCTATCAAATATAAGTA+AGG | - | chr1_2:52980834-52980853 | None:intergenic | 20.0% |
!!! | AGCTTTTAAATATTTGATGA+TGG | + | chr1_2:52981222-52981241 | Msa0076700:intron | 20.0% |
!! | AGAAATATAATGAAATGGTT+TGG | - | chr1_2:52981814-52981833 | None:intergenic | 20.0% |
!! | TAAAAGAACTCTTTCATATA+TGG | - | chr1_2:52981845-52981864 | None:intergenic | 20.0% |
!!! | CTTCATCTTTTACTTTAATT+TGG | - | chr1_2:52982471-52982490 | None:intergenic | 20.0% |
!! | ATATGGACATTATGAATATA+AGG | + | chr1_2:52982519-52982538 | Msa0076700:CDS | 20.0% |
!!! | TAAAGGTAAAATTTTTGTGT+GGG | + | chr1_2:52982955-52982974 | Msa0076700:CDS | 20.0% |
! | CCTAAAATAGAATTAAGAAC+GGG | - | chr1_2:52978295-52978314 | None:intergenic | 25.0% |
!! | CCAATTCAAGTTAACAAATT+CGG | - | chr1_2:52978654-52978673 | None:intergenic | 25.0% |
!!! | CGAATTTGTTAACTTGAATT+GGG | + | chr1_2:52978652-52978671 | Msa0076700:intron | 25.0% |
! | TGTTTAATCATACAATCCTT+AGG | - | chr1_2:52978733-52978752 | None:intergenic | 25.0% |
! | AACTATTACTTTCTTATTGG+GGG | + | chr1_2:52979003-52979022 | Msa0076700:intron | 25.0% |
! | TATATGACACTTGAGTTTAT+CGG | + | chr1_2:52979064-52979083 | Msa0076700:intron | 25.0% |
! | AGCAAGTCAATTTACAATTA+GGG | - | chr1_2:52979102-52979121 | None:intergenic | 25.0% |
! | AAGCAAGTCAATTTACAATT+AGG | - | chr1_2:52979103-52979122 | None:intergenic | 25.0% |
! | ATTAGTATGTGAACTATTCA+AGG | + | chr1_2:52979219-52979238 | Msa0076700:intron | 25.0% |
! | TTTCTGACTGTAACAAATTT+AGG | + | chr1_2:52979275-52979294 | Msa0076700:intron | 25.0% |
!!! | TCATAAGCTTGTTAAAAGTA+TGG | + | chr1_2:52979770-52979789 | Msa0076700:CDS | 25.0% |
!! | CAGTCCTATTTTCTTATATT+TGG | + | chr1_2:52980783-52980802 | Msa0076700:intron | 25.0% |
! | GCATCCAAATATAAGAAAAT+AGG | - | chr1_2:52980790-52980809 | None:intergenic | 25.0% |
! | TCACTGTTATTATTTAATGG+AGG | + | chr1_2:52981543-52981562 | Msa0076700:intron | 25.0% |
! | ATATTGTTCCTCTAATCTTT+AGG | + | chr1_2:52981882-52981901 | Msa0076700:intron | 25.0% |
! | TATTGTTCCTCTAATCTTTA+GGG | + | chr1_2:52981883-52981902 | Msa0076700:intron | 25.0% |
!! | ATTTTCTATTGATCTTGTTC+CGG | + | chr1_2:52982147-52982166 | Msa0076700:CDS | 25.0% |
! | AAGTGGATATCTATTCTTTA+TGG | - | chr1_2:52982371-52982390 | None:intergenic | 25.0% |
!! | GTAAAGGTAAAATTTTTGTG+TGG | + | chr1_2:52982954-52982973 | Msa0076700:CDS | 25.0% |
! | ATATTGTGATGTGTCTAAAT+TGG | + | chr1_2:52983072-52983091 | Msa0076700:CDS | 25.0% |
! | TATTGTGATGTGTCTAAATT+GGG | + | chr1_2:52983073-52983092 | Msa0076700:CDS | 25.0% |
ACGGGAAAAATGATTGAAAT+AGG | - | chr1_2:52978277-52978296 | None:intergenic | 30.0% | |
! | CCCGTTCTTAATTCTATTTT+AGG | + | chr1_2:52978292-52978311 | Msa0076700:five_prime_UTR | 30.0% |
ATAGGTATGTATGTATACCT+GGG | - | chr1_2:52978530-52978549 | None:intergenic | 30.0% | |
AATAGGTATGTATGTATACC+TGG | - | chr1_2:52978531-52978550 | None:intergenic | 30.0% | |
!! | CCGAATTTGTTAACTTGAAT+TGG | + | chr1_2:52978651-52978670 | Msa0076700:intron | 30.0% |
ACTAAAAACATAGGGAACTT+GGG | - | chr1_2:52978776-52978795 | None:intergenic | 30.0% | |
TTCAAACGCTATAATTGCAT+GGG | - | chr1_2:52978799-52978818 | None:intergenic | 30.0% | |
TTTCAAACGCTATAATTGCA+TGG | - | chr1_2:52978800-52978819 | None:intergenic | 30.0% | |
! | TTGTTGCTTATAGTCGTTAT+TGG | + | chr1_2:52978849-52978868 | Msa0076700:intron | 30.0% |
! | TGTTGCTTATAGTCGTTATT+GGG | + | chr1_2:52978850-52978869 | Msa0076700:intron | 30.0% |
!! | CCTACAATTAAAGTGTTTTC+TGG | - | chr1_2:52978949-52978968 | None:intergenic | 30.0% |
CCAGAAAACACTTTAATTGT+AGG | + | chr1_2:52978946-52978965 | Msa0076700:intron | 30.0% | |
! | TTGAGTTTATCGGATTTTCA+AGG | + | chr1_2:52979074-52979093 | Msa0076700:intron | 30.0% |
AAGCTATTTAGAGAATGGTA+TGG | - | chr1_2:52979660-52979679 | None:intergenic | 30.0% | |
AAAGCAAGCTATTTAGAGAA+TGG | - | chr1_2:52979665-52979684 | None:intergenic | 30.0% | |
!! | CTAAATAGCTTGCTTTGAAA+CGG | + | chr1_2:52979669-52979688 | Msa0076700:intron | 30.0% |
AAAGTGAAAGTGAAGATGAA+GGG | + | chr1_2:52979733-52979752 | Msa0076700:CDS | 30.0% | |
! | CTTGTTAAAAGTATGGATGT+TGG | + | chr1_2:52979777-52979796 | Msa0076700:CDS | 30.0% |
CTTCTTCACATTATGTACAT+CGG | + | chr1_2:52979805-52979824 | Msa0076700:CDS | 30.0% | |
TTCTTCACATTATGTACATC+GGG | + | chr1_2:52979806-52979825 | Msa0076700:CDS | 30.0% | |
TTACTGTAACATTCAGATCT+GGG | - | chr1_2:52979863-52979882 | None:intergenic | 30.0% | |
CAAGGTTTATAAATGCTACA+GGG | - | chr1_2:52979905-52979924 | None:intergenic | 30.0% | |
TCAAGGTTTATAAATGCTAC+AGG | - | chr1_2:52979906-52979925 | None:intergenic | 30.0% | |
GTAGCATTTATAAACCTTGA+AGG | + | chr1_2:52979906-52979925 | Msa0076700:CDS | 30.0% | |
!! | AGCTAGTGAAAATTTTGATC+AGG | + | chr1_2:52980322-52980341 | Msa0076700:CDS | 30.0% |
!! | GCTAGTGAAAATTTTGATCA+GGG | + | chr1_2:52980323-52980342 | Msa0076700:CDS | 30.0% |
GGATGTCATTGTTGAAAATT+TGG | + | chr1_2:52980355-52980374 | Msa0076700:CDS | 30.0% | |
AAACAATCTGAATGAAGAGT+GGG | + | chr1_2:52980469-52980488 | Msa0076700:CDS | 30.0% | |
!!! | ATTTGTTTTTGCTTCATCGA+TGG | - | chr1_2:52980753-52980772 | None:intergenic | 30.0% |
CGATGAAGCAAAAACAAATA+AGG | + | chr1_2:52980754-52980773 | Msa0076700:CDS | 30.0% | |
ATTCAAAACAATGGTTACAC+TGG | - | chr1_2:52980867-52980886 | None:intergenic | 30.0% | |
!!! | GAAAACCTTGTTTTCATCAA+TGG | + | chr1_2:52981008-52981027 | Msa0076700:intron | 30.0% |
AGATTCCATTGATGAAAACA+AGG | - | chr1_2:52981016-52981035 | None:intergenic | 30.0% | |
AGGGTTTGATATTCTAGATA+GGG | + | chr1_2:52981110-52981129 | Msa0076700:CDS | 30.0% | |
!!! | TGATGGTTTTTTAGACATGA+TGG | + | chr1_2:52981239-52981258 | Msa0076700:intron | 30.0% |
TCTGAATAATCTCAGTTAGT+CGG | - | chr1_2:52981512-52981531 | None:intergenic | 30.0% | |
CTAACTGAGATTATTCAGAT+CGG | + | chr1_2:52981513-52981532 | Msa0076700:intron | 30.0% | |
AAAGCTTGAAAAAGAGGAAT+CGG | + | chr1_2:52981674-52981693 | Msa0076700:CDS | 30.0% | |
ATTGTTCCTCTAATCTTTAG+GGG | + | chr1_2:52981884-52981903 | Msa0076700:intron | 30.0% | |
!!! | TTTAGTGGGTTTTAAGATCA+TGG | + | chr1_2:52981984-52982003 | Msa0076700:intron | 30.0% |
! | TTTTCTATTGATCTTGTTCC+GGG | + | chr1_2:52982148-52982167 | Msa0076700:CDS | 30.0% |
TTCTTCTTAACCAACAATAC+CGG | - | chr1_2:52982298-52982317 | None:intergenic | 30.0% | |
! | TTGTTGGTTAAGAAGAAAGA+TGG | + | chr1_2:52982301-52982320 | Msa0076700:CDS | 30.0% |
TCTATCAAGTCATCAATTCT+TGG | - | chr1_2:52982394-52982413 | None:intergenic | 30.0% | |
TACCACTACTAGAGATAATA+TGG | - | chr1_2:52982781-52982800 | None:intergenic | 30.0% | |
! | TACTGAAGTTAGAAGCTTTT+TGG | + | chr1_2:52982859-52982878 | Msa0076700:CDS | 30.0% |
! | ACTGAAGTTAGAAGCTTTTT+GGG | + | chr1_2:52982860-52982879 | Msa0076700:CDS | 30.0% |
TACTATCGAAGGTTTATAGA+AGG | + | chr1_2:52982893-52982912 | Msa0076700:CDS | 30.0% | |
! | AAATTTTTGTGTGGGATGTT+CGG | + | chr1_2:52982963-52982982 | Msa0076700:CDS | 30.0% |
ACATCACAATATACCACAAA+AGG | - | chr1_2:52983064-52983083 | None:intergenic | 30.0% | |
! | ATTAGTGAAAGAGTGTGTGT+GGG | - | chr1_2:52978211-52978230 | None:intergenic | 35.0% |
AATCATGCATATTCGACGTT+AGG | + | chr1_2:52978413-52978432 | Msa0076700:intron | 35.0% | |
ATCATGCATATTCGACGTTA+GGG | + | chr1_2:52978414-52978433 | Msa0076700:intron | 35.0% | |
TAGGTATGTATGTATACCTG+GGG | - | chr1_2:52978529-52978548 | None:intergenic | 35.0% | |
GACTAAAAACATAGGGAACT+TGG | - | chr1_2:52978777-52978796 | None:intergenic | 35.0% | |
TGCATGGGACTAAAAACATA+GGG | - | chr1_2:52978784-52978803 | None:intergenic | 35.0% | |
TTGCATGGGACTAAAAACAT+AGG | - | chr1_2:52978785-52978804 | None:intergenic | 35.0% | |
ATTACTTTCTTATTGGGGGA+TGG | + | chr1_2:52979007-52979026 | Msa0076700:intron | 35.0% | |
TGGAATGGTTACATCAATCA+TGG | + | chr1_2:52979027-52979046 | Msa0076700:intron | 35.0% | |
ATACAGGCAAAGAAAGAAAC+AGG | - | chr1_2:52979444-52979463 | None:intergenic | 35.0% | |
GTTTCTTTCTTTGCCTGTAT+AGG | + | chr1_2:52979444-52979463 | Msa0076700:intron | 35.0% | |
GAAAGTGAAAGTGAAGATGA+AGG | + | chr1_2:52979732-52979751 | Msa0076700:CDS | 35.0% | |
AAGTGAAAGTGAAGATGAAG+GGG | + | chr1_2:52979734-52979753 | Msa0076700:CDS | 35.0% | |
GTTACTGTAACATTCAGATC+TGG | - | chr1_2:52979864-52979883 | None:intergenic | 35.0% | |
AGAAAGTGAACAAACCTTCA+AGG | - | chr1_2:52979923-52979942 | None:intergenic | 35.0% | |
! | ATACCTTGCTTGCTTTGAAT+TGG | + | chr1_2:52979963-52979982 | Msa0076700:intron | 35.0% |
CTGTTGAAGATACTGATGTT+GGG | + | chr1_2:52980066-52980085 | Msa0076700:CDS | 35.0% | |
ATGAAACCAGTCAATTGCTT+GGG | + | chr1_2:52980222-52980241 | Msa0076700:CDS | 35.0% | |
TTGCTTGGGGTAAATAATGA+TGG | + | chr1_2:52980236-52980255 | Msa0076700:CDS | 35.0% | |
TATCTCTAGTGAAATTTCCC+AGG | + | chr1_2:52980274-52980293 | Msa0076700:CDS | 35.0% | |
! | AAATCCATTTGATGACTCCT+GGG | - | chr1_2:52980294-52980313 | None:intergenic | 35.0% |
! | AAAATCCATTTGATGACTCC+TGG | - | chr1_2:52980295-52980314 | None:intergenic | 35.0% |
!! | AGGAGTCATCAAATGGATTT+TGG | + | chr1_2:52980294-52980313 | Msa0076700:CDS | 35.0% |
GTTGAAAATTTGGCATCTTC+AGG | + | chr1_2:52980365-52980384 | Msa0076700:CDS | 35.0% | |
CAAACAATCTGAATGAAGAG+TGG | + | chr1_2:52980468-52980487 | Msa0076700:CDS | 35.0% | |
ATTGATGAGAATACGACTCT+AGG | + | chr1_2:52980686-52980705 | Msa0076700:CDS | 35.0% | |
TCTTATCAACTTGATGAGAG+AGG | + | chr1_2:52981035-52981054 | Msa0076700:CDS | 35.0% | |
! | ATCTAGAATATCAAACCCTC+CGG | - | chr1_2:52981109-52981128 | None:intergenic | 35.0% |
GAGGGTTTGATATTCTAGAT+AGG | + | chr1_2:52981109-52981128 | Msa0076700:CDS | 35.0% | |
AAGAAGCAAATGACATGGTT+CGG | + | chr1_2:52981166-52981185 | Msa0076700:intron | 35.0% | |
!! | ACTTTTTATTTGCAGCATGC+TGG | + | chr1_2:52981282-52981301 | Msa0076700:intron | 35.0% |
!! | CTTTTTATTTGCAGCATGCT+GGG | + | chr1_2:52981283-52981302 | Msa0076700:intron | 35.0% |
!! | TTTTTATTTGCAGCATGCTG+GGG | + | chr1_2:52981284-52981303 | Msa0076700:intron | 35.0% |
CTAATCGAGATTCAAGACTT+TGG | - | chr1_2:52981617-52981636 | None:intergenic | 35.0% | |
GCTTGAAAAGCTTGAAAAAG+AGG | + | chr1_2:52981668-52981687 | Msa0076700:CDS | 35.0% | |
! | TCTAGAACAAGAAGCAATGA+TGG | + | chr1_2:52981710-52981729 | Msa0076700:CDS | 35.0% |
TTGAGATCCTCTCCATTTAA+TGG | + | chr1_2:52981907-52981926 | Msa0076700:intron | 35.0% | |
!! | AAATGGGAGTGTCCATTAAA+TGG | - | chr1_2:52981922-52981941 | None:intergenic | 35.0% |
! | ATTTAATGGACACTCCCATT+TGG | + | chr1_2:52981921-52981940 | Msa0076700:intron | 35.0% |
AGAAGAAAGATGGTAGTATG+AGG | + | chr1_2:52982311-52982330 | Msa0076700:CDS | 35.0% | |
AAGTCATCAATTCTTGGAAG+TGG | - | chr1_2:52982388-52982407 | None:intergenic | 35.0% | |
AGATGAAGATATGCAGAAGA+CGG | + | chr1_2:52982483-52982502 | Msa0076700:CDS | 35.0% | |
! | GAATATAAGGTGATGCCTTT+TGG | + | chr1_2:52982532-52982551 | Msa0076700:intron | 35.0% |
ATATACTCCATAAACACACC+AGG | - | chr1_2:52982571-52982590 | None:intergenic | 35.0% | |
! | ATCGCATTTCCATGCATTTT+TGG | + | chr1_2:52982593-52982612 | Msa0076700:intron | 35.0% |
AATTGTCTAGGTGTGAATTC+TGG | + | chr1_2:52982733-52982752 | Msa0076700:intron | 35.0% | |
! | CTAACTTCAGTAACTGACTT+TGG | - | chr1_2:52982851-52982870 | None:intergenic | 35.0% |
!!! | AGTTAGAAGCTTTTTGGGTT+TGG | + | chr1_2:52982865-52982884 | Msa0076700:CDS | 35.0% |
GGTTTCGGCAAAATCAAAAT+TGG | - | chr1_2:52983034-52983053 | None:intergenic | 35.0% | |
ACAAAAGGTTCATCAGGTTT+CGG | - | chr1_2:52983049-52983068 | None:intergenic | 35.0% | |
TATACCACAAAAGGTTCATC+AGG | - | chr1_2:52983055-52983074 | None:intergenic | 35.0% | |
! | GATTAGTGAAAGAGTGTGTG+TGG | - | chr1_2:52978212-52978231 | None:intergenic | 40.0% |
! | TTTTGCATGACGTAACTCAC+AGG | + | chr1_2:52978350-52978369 | Msa0076700:intron | 40.0% |
TTTGCATGACGTAACTCACA+GGG | + | chr1_2:52978351-52978370 | Msa0076700:intron | 40.0% | |
TACGTCAAATCGTCTCATCA+TGG | + | chr1_2:52978465-52978484 | Msa0076700:exon | 40.0% | |
ACGTCAAATCGTCTCATCAT+GGG | + | chr1_2:52978466-52978485 | Msa0076700:exon | 40.0% | |
! | TTTGCTCGATATTTTTCCCC+AGG | + | chr1_2:52978510-52978529 | Msa0076700:CDS | 40.0% |
!!! | GGTTTTGGAATTTGCAAGGT+CGG | + | chr1_2:52978887-52978906 | Msa0076700:intron | 40.0% |
TTTCTTATTGGGGGATGGAA+TGG | + | chr1_2:52979012-52979031 | Msa0076700:intron | 40.0% | |
AGCGATAGAAGACTTATTCG+TGG | - | chr1_2:52979345-52979364 | None:intergenic | 40.0% | |
GAGATATTACACTGGGAATG+TGG | + | chr1_2:52979384-52979403 | Msa0076700:intron | 40.0% | |
AAGAAGCAGGTATCAGTAAC+AGG | - | chr1_2:52979414-52979433 | None:intergenic | 40.0% | |
TCTTTCTTTGCCTGTATAGG+TGG | + | chr1_2:52979447-52979466 | Msa0076700:intron | 40.0% | |
TAAAAGTAGACTCACCTTCC+AGG | - | chr1_2:52979624-52979643 | None:intergenic | 40.0% | |
! | TGAAGATGAAGGGGAGATTT+TGG | + | chr1_2:52979743-52979762 | Msa0076700:CDS | 40.0% |
CAAAGCAAGCAAGGTATAGA+TGG | - | chr1_2:52979960-52979979 | None:intergenic | 40.0% | |
ACACCAATTCAAAGCAAGCA+AGG | - | chr1_2:52979969-52979988 | None:intergenic | 40.0% | |
TGAATCTTCAGATGAAAGCG+AGG | + | chr1_2:52980013-52980032 | Msa0076700:intron | 40.0% | |
CCAACATCAGTATCTTCAAC+AGG | - | chr1_2:52980068-52980087 | None:intergenic | 40.0% | |
CCTGTTGAAGATACTGATGT+TGG | + | chr1_2:52980065-52980084 | Msa0076700:CDS | 40.0% | |
! | GCAGCTTTGATGATTTGTAC+AGG | - | chr1_2:52980128-52980147 | None:intergenic | 40.0% |
ATCCAGTCCACAAGAAGAAT+CGG | - | chr1_2:52980150-52980169 | None:intergenic | 40.0% | |
! | GGTTTCATCATTTAGCTCAC+TGG | - | chr1_2:52980210-52980229 | None:intergenic | 40.0% |
GATGAAACCAGTCAATTGCT+TGG | + | chr1_2:52980221-52980240 | Msa0076700:CDS | 40.0% | |
TGAAACCAGTCAATTGCTTG+GGG | + | chr1_2:52980223-52980242 | Msa0076700:CDS | 40.0% | |
ATTTACCCCAAGCAATTGAC+TGG | - | chr1_2:52980231-52980250 | None:intergenic | 40.0% | |
ATTTCCCAGGAGTCATCAAA+TGG | + | chr1_2:52980287-52980306 | Msa0076700:CDS | 40.0% | |
TTCAGGTGTATATCACGTGT+TGG | + | chr1_2:52980382-52980401 | Msa0076700:CDS | 40.0% | |
TGTATATCACGTGTTGGAGA+CGG | + | chr1_2:52980388-52980407 | Msa0076700:CDS | 40.0% | |
GGAACAGATAAATGTTGCAG+AGG | + | chr1_2:52980409-52980428 | Msa0076700:CDS | 40.0% | |
ACAGATAAATGTTGCAGAGG+AGG | + | chr1_2:52980412-52980431 | Msa0076700:CDS | 40.0% | |
GCTACTTCCATGACTAACAA+TGG | + | chr1_2:52980434-52980453 | Msa0076700:CDS | 40.0% | |
TCCATGACTAACAATGGCAA+TGG | + | chr1_2:52980440-52980459 | Msa0076700:CDS | 40.0% | |
TCCATTGCCATTGTTAGTCA+TGG | - | chr1_2:52980444-52980463 | None:intergenic | 40.0% | |
! | GTGGGTAGATTTTGTTCCTA+AGG | + | chr1_2:52980487-52980506 | Msa0076700:CDS | 40.0% |
GCATCATAATCTTCAGCCTT+AGG | - | chr1_2:52980506-52980525 | None:intergenic | 40.0% | |
ACTATCTGCGATACAAGTCA+CGG | + | chr1_2:52980527-52980546 | Msa0076700:CDS | 40.0% | |
TCAAACAGTGTCTCAAGTTC+AGG | + | chr1_2:52980598-52980617 | Msa0076700:CDS | 40.0% | |
CAAACAGTGTCTCAAGTTCA+GGG | + | chr1_2:52980599-52980618 | Msa0076700:CDS | 40.0% | |
AAACAGTGTCTCAAGTTCAG+GGG | + | chr1_2:52980600-52980619 | Msa0076700:CDS | 40.0% | |
TACTGCAGGCTGGATTATAT+TGG | - | chr1_2:52980712-52980731 | None:intergenic | 40.0% | |
CTCAAGCATATCAATACTGC+AGG | - | chr1_2:52980726-52980745 | None:intergenic | 40.0% | |
!! | CTGCAGTATTGATATGCTTG+AGG | + | chr1_2:52980724-52980743 | Msa0076700:CDS | 40.0% |
TATCAACTTGATGAGAGAGG+TGG | + | chr1_2:52981038-52981057 | Msa0076700:CDS | 40.0% | |
AGATGAGTATCAAGCCATGT+TGG | + | chr1_2:52981134-52981153 | Msa0076700:CDS | 40.0% | |
CGCTAAAGAAGCAAATGACA+TGG | + | chr1_2:52981161-52981180 | Msa0076700:CDS | 40.0% | |
TGGGGAAATTTATGGCGAAA+AGG | + | chr1_2:52981302-52981321 | Msa0076700:CDS | 40.0% | |
TTATGGCGAAAAGGCAATTC+TGG | + | chr1_2:52981311-52981330 | Msa0076700:CDS | 40.0% | |
GTCTCTTGCAATTCTTGATG+AGG | + | chr1_2:52981392-52981411 | Msa0076700:CDS | 40.0% | |
AGCAGAAATGTTGAGGAAAG+CGG | + | chr1_2:52981641-52981660 | Msa0076700:CDS | 40.0% | |
TTGAAAAAGAGGAATCGGCA+AGG | + | chr1_2:52981679-52981698 | Msa0076700:CDS | 40.0% | |
TGAAAAAGAGGAATCGGCAA+GGG | + | chr1_2:52981680-52981699 | Msa0076700:CDS | 40.0% | |
! | ACAAGAAGCAATGATGGAGA+AGG | + | chr1_2:52981716-52981735 | Msa0076700:CDS | 40.0% |
! | AATGATGGAGAAGGTAGTAC+AGG | + | chr1_2:52981725-52981744 | Msa0076700:CDS | 40.0% |
AGAAGGTAGTACAGGAATCA+CGG | + | chr1_2:52981733-52981752 | Msa0076700:CDS | 40.0% | |
GGAAGCTGAAGAGAATTCAA+AGG | + | chr1_2:52981767-52981786 | Msa0076700:CDS | 40.0% | |
! | ATGAAATGGTTTGGAAGCAG+AGG | - | chr1_2:52981805-52981824 | None:intergenic | 40.0% |
TCTCAACCCCTAAAGATTAG+AGG | - | chr1_2:52981893-52981912 | None:intergenic | 40.0% | |
CATTGTCTCTCTCTCCAAAT+GGG | - | chr1_2:52981938-52981957 | None:intergenic | 40.0% | |
TCATTGTCTCTCTCTCCAAA+TGG | - | chr1_2:52981939-52981958 | None:intergenic | 40.0% | |
TTTCTTCAACTCAGCCAACT+CGG | - | chr1_2:52982215-52982234 | None:intergenic | 40.0% | |
! | TGAGTTGAAGAAACAGTTGG+AGG | + | chr1_2:52982222-52982241 | Msa0076700:CDS | 40.0% |
TAAGACCAAGTGTTTCACCT+TGG | + | chr1_2:52982266-52982285 | Msa0076700:CDS | 40.0% | |
AAGACCAAGTGTTTCACCTT+GGG | + | chr1_2:52982267-52982286 | Msa0076700:CDS | 40.0% | |
!! | TGTTCAGCAAGATTGACTTG+AGG | + | chr1_2:52982434-52982453 | Msa0076700:intron | 40.0% |
!! | AGCAAGATTGACTTGAGGTT+CGG | + | chr1_2:52982439-52982458 | Msa0076700:intron | 40.0% |
! | ATATGCAGAAGACGGCTTTT+AGG | + | chr1_2:52982491-52982510 | Msa0076700:CDS | 40.0% |
!! | AAGTGCTGAAAGAGAAGAAG+CGG | + | chr1_2:52982703-52982722 | Msa0076700:CDS | 40.0% |
AGCGGTATGCTAAATTGTCT+AGG | + | chr1_2:52982721-52982740 | Msa0076700:intron | 40.0% | |
! | TAGGTGTGAATTCTGGTTGA+AGG | + | chr1_2:52982740-52982759 | Msa0076700:intron | 40.0% |
! | AGGTGTGAATTCTGGTTGAA+GGG | + | chr1_2:52982741-52982760 | Msa0076700:intron | 40.0% |
GTTGAAGGGAGTAAGTTTCT+TGG | + | chr1_2:52982755-52982774 | Msa0076700:intron | 40.0% | |
GGCCATATTATCTCTAGTAG+TGG | + | chr1_2:52982776-52982795 | Msa0076700:intron | 40.0% | |
!! | GGATCCATCTAAAGTTGATG+CGG | + | chr1_2:52982808-52982827 | Msa0076700:CDS | 40.0% |
GATACCGCATCAACTTTAGA+TGG | - | chr1_2:52982815-52982834 | None:intergenic | 40.0% | |
TTACACGTCAACTGCGTTAA+CGG | - | chr1_2:52982938-52982957 | None:intergenic | 40.0% | |
TTAACGCAGTTGACGTGTAA+AGG | + | chr1_2:52982938-52982957 | Msa0076700:CDS | 40.0% | |
!! | ATTGAAGAAGCGTTTGACGA+CGG | + | chr1_2:52983006-52983025 | Msa0076700:CDS | 40.0% |
! | GAAACCTGATGAACCTTTTG+TGG | + | chr1_2:52983048-52983067 | Msa0076700:CDS | 40.0% |
ACGCAATTTCCCTATGAGTC+TGG | - | chr1_2:52978149-52978168 | None:intergenic | 45.0% | |
CGCGTGCAACAATTAACACT+AGG | + | chr1_2:52978180-52978199 | Msa0076700:five_prime_UTR | 45.0% | |
TGCAAATTCCAAAACCGTCG+CGG | - | chr1_2:52978883-52978902 | None:intergenic | 45.0% | |
!!! | CGACGGTTTTGGAATTTGCA+AGG | + | chr1_2:52978883-52978902 | Msa0076700:intron | 45.0% |
TATTACACTGGGAATGTGGC+TGG | + | chr1_2:52979388-52979407 | Msa0076700:intron | 45.0% | |
AACCTGGAATCCACCTATAC+AGG | - | chr1_2:52979460-52979479 | None:intergenic | 45.0% | |
AGTGGCTATTGAACACTCGA+AGG | + | chr1_2:52979489-52979508 | Msa0076700:CDS | 45.0% | |
ACACTCGAAGGATGCTGATA+TGG | + | chr1_2:52979501-52979520 | Msa0076700:CDS | 45.0% | |
TAGGGTTTGTATCCCGTGAA+GGG | - | chr1_2:52979588-52979607 | None:intergenic | 45.0% | |
CCAGGTTCACTATGACTCTA+GGG | - | chr1_2:52979606-52979625 | None:intergenic | 45.0% | |
TCCAGGTTCACTATGACTCT+AGG | - | chr1_2:52979607-52979626 | None:intergenic | 45.0% | |
AGAGTCATAGTGAACCTGGA+AGG | + | chr1_2:52979607-52979626 | Msa0076700:CDS | 45.0% | |
AAATCTGCCAGCTCTTCTTC+TGG | + | chr1_2:52979837-52979856 | Msa0076700:CDS | 45.0% | |
!!! | GCTACAGGGCTTTTAACTTG+TGG | - | chr1_2:52979891-52979910 | None:intergenic | 45.0% |
TCAGATGAAAGCGAGGATGA+AGG | + | chr1_2:52980020-52980039 | Msa0076700:intron | 45.0% | |
CAGATGAAAGCGAGGATGAA+GGG | + | chr1_2:52980021-52980040 | Msa0076700:intron | 45.0% | |
AAAGCGAGGATGAAGGGAAA+AGG | + | chr1_2:52980027-52980046 | Msa0076700:CDS | 45.0% | |
TGGGTCGTCTTCATCATCAT+TGG | + | chr1_2:52980085-52980104 | Msa0076700:CDS | 45.0% | |
!! | AAAGCTGCCGATTCTTCTTG+TGG | + | chr1_2:52980140-52980159 | Msa0076700:CDS | 45.0% |
! | TTTTGATCAGGGACGACTTG+TGG | + | chr1_2:52980334-52980353 | Msa0076700:CDS | 45.0% |
! | AGAGTCTTCTGACTCGATCA+AGG | - | chr1_2:52980573-52980592 | None:intergenic | 45.0% |
AGCATATCAATACTGCAGGC+TGG | - | chr1_2:52980722-52980741 | None:intergenic | 45.0% | |
TAGAATATCAAACCCTCCGG+TGG | - | chr1_2:52981106-52981125 | None:intergenic | 45.0% | |
TTCTTTAGCGTGCACCAACA+TGG | - | chr1_2:52981151-52981170 | None:intergenic | 45.0% | |
CAGCATGCTGGGGAAATTTA+TGG | + | chr1_2:52981294-52981313 | Msa0076700:intron | 45.0% | |
CAGTTAGTCGGAAAGATGCT+CGG | - | chr1_2:52981500-52981519 | None:intergenic | 45.0% | |
TAGCTGCAGCAGAAATGTTG+AGG | + | chr1_2:52981634-52981653 | Msa0076700:CDS | 45.0% | |
! | GGAGTGTCCATTAAATGGAG+AGG | - | chr1_2:52981917-52981936 | None:intergenic | 45.0% |
GAAAATTCAACCTCCCTCTC+CGG | - | chr1_2:52982133-52982152 | None:intergenic | 45.0% | |
! | CGATAAGGTGTCATCGATAC+AGG | - | chr1_2:52982181-52982200 | None:intergenic | 45.0% |
TCGGAAGCTGACATACGATA+AGG | - | chr1_2:52982196-52982215 | None:intergenic | 45.0% | |
! | GGCTGAGTTGAAGAAACAGT+TGG | + | chr1_2:52982219-52982238 | Msa0076700:CDS | 45.0% |
AGACCAAGTGTTTCACCTTG+GGG | + | chr1_2:52982268-52982287 | Msa0076700:CDS | 45.0% | |
TGACTTGATAGACCAGCTAG+TGG | + | chr1_2:52982402-52982421 | Msa0076700:intron | 45.0% | |
GACTTGATAGACCAGCTAGT+GGG | + | chr1_2:52982403-52982422 | Msa0076700:intron | 45.0% | |
GGCGCATTACTAACACCAAA+AGG | - | chr1_2:52982550-52982569 | None:intergenic | 45.0% | |
!! | TTTGGTGTTAGTAATGCGCC+TGG | + | chr1_2:52982550-52982569 | Msa0076700:intron | 45.0% |
TAATGCGCCTGGTGTGTTTA+TGG | + | chr1_2:52982561-52982580 | Msa0076700:intron | 45.0% | |
CGATGAATACAACCACGAAG+CGG | - | chr1_2:52982620-52982639 | None:intergenic | 45.0% | |
CTCTAGTAGTGGTATTGCAG+TGG | + | chr1_2:52982787-52982806 | Msa0076700:intron | 45.0% | |
!! | AAGTTGATGCGGTATCACGA+TGG | + | chr1_2:52982819-52982838 | Msa0076700:CDS | 45.0% |
! | AGTTGATGCGGTATCACGAT+GGG | + | chr1_2:52982820-52982839 | Msa0076700:CDS | 45.0% |
!!! | AGAAGCTTTTTGGGTTTGGC+AGG | + | chr1_2:52982869-52982888 | Msa0076700:CDS | 45.0% |
GTTTGGCAGGTTACTATCGA+AGG | + | chr1_2:52982882-52982901 | Msa0076700:CDS | 45.0% | |
AATTCCAAAACCGTCGCGGT+AGG | - | chr1_2:52978879-52978898 | None:intergenic | 50.0% | |
AACAGGCATCAGCAAGAAGC+AGG | - | chr1_2:52979427-52979446 | None:intergenic | 50.0% | |
! | TGCCTGTATAGGTGGATTCC+AGG | + | chr1_2:52979455-52979474 | Msa0076700:intron | 50.0% |
! | AGGTGGATTCCAGGTTGTTG+AGG | + | chr1_2:52979464-52979483 | Msa0076700:intron | 50.0% |
! | GGTGGATTCCAGGTTGTTGA+GGG | + | chr1_2:52979465-52979484 | Msa0076700:intron | 50.0% |
GAAGGATGCTGATATGGCTG+CGG | + | chr1_2:52979507-52979526 | Msa0076700:CDS | 50.0% | |
GGCTGCGGAAGTTGTTCTTA+CGG | + | chr1_2:52979522-52979541 | Msa0076700:CDS | 50.0% | |
TACTTCCAGCATCCCCTTCA+CGG | + | chr1_2:52979572-52979591 | Msa0076700:CDS | 50.0% | |
AGGGTTTGTATCCCGTGAAG+GGG | - | chr1_2:52979587-52979606 | None:intergenic | 50.0% | |
CTAGGGTTTGTATCCCGTGA+AGG | - | chr1_2:52979589-52979608 | None:intergenic | 50.0% | |
CCCTAGAGTCATAGTGAACC+TGG | + | chr1_2:52979603-52979622 | Msa0076700:CDS | 50.0% | |
CGAGGATGAAGGGAAAAGGT+TGG | + | chr1_2:52980031-52980050 | Msa0076700:CDS | 50.0% | |
!! | TGCCGATTCTTCTTGTGGAC+TGG | + | chr1_2:52980145-52980164 | Msa0076700:CDS | 50.0% |
CTGCGATACAAGTCACGGAT+TGG | + | chr1_2:52980532-52980551 | Msa0076700:CDS | 50.0% | |
GATGAGAGAGGTGGAACATC+AGG | + | chr1_2:52981047-52981066 | Msa0076700:CDS | 50.0% | |
TCAGGAGAAACTTGCAGAGC+AGG | + | chr1_2:52981065-52981084 | Msa0076700:CDS | 50.0% | |
AATTCTGGCGACTGAGCTGA+AGG | + | chr1_2:52981326-52981345 | Msa0076700:CDS | 50.0% | |
TGTCCAGCTTGTCTGGTGAA+AGG | + | chr1_2:52981364-52981383 | Msa0076700:CDS | 50.0% | |
GTCCAGCTTGTCTGGTGAAA+GGG | + | chr1_2:52981365-52981384 | Msa0076700:CDS | 50.0% | |
ATCCCTTTCACCAGACAAGC+TGG | - | chr1_2:52981370-52981389 | None:intergenic | 50.0% | |
ATCGATACAGGCTTCGTTCC+CGG | - | chr1_2:52982169-52982188 | None:intergenic | 50.0% | |
TCGTATGTCAGCTTCCGAGT+TGG | + | chr1_2:52982198-52982217 | Msa0076700:CDS | 50.0% | |
!!! | ACGGCTTTTAGGACGCGATA+TGG | + | chr1_2:52982502-52982521 | Msa0076700:CDS | 50.0% |
CGAAGCGGTCCAAAAATGCA+TGG | - | chr1_2:52982605-52982624 | None:intergenic | 50.0% | |
!! | TGCATTTTTGGACCGCTTCG+TGG | + | chr1_2:52982605-52982624 | Msa0076700:intron | 50.0% |
TTCCAGGTTGTTGAGGGCAG+TGG | + | chr1_2:52979471-52979490 | Msa0076700:CDS | 55.0% | |
ACTTCCAGCATCCCCTTCAC+GGG | + | chr1_2:52979573-52979592 | Msa0076700:CDS | 55.0% | |
ATCTGGGCCAGAAGAAGAGC+TGG | - | chr1_2:52979847-52979866 | None:intergenic | 55.0% | |
GCCAATATAGCAGCGACCAC+CGG | + | chr1_2:52981087-52981106 | Msa0076700:CDS | 55.0% | |
TCCGGTGGTCGCTGCTATAT+TGG | - | chr1_2:52981091-52981110 | None:intergenic | 55.0% | |
AATATAGCAGCGACCACCGG+AGG | + | chr1_2:52981090-52981109 | Msa0076700:CDS | 55.0% | |
ATATAGCAGCGACCACCGGA+GGG | + | chr1_2:52981091-52981110 | Msa0076700:CDS | 55.0% | |
TCACGTCTGTCCAGCTTGTC+TGG | + | chr1_2:52981357-52981376 | Msa0076700:CDS | 55.0% | |
GGAATCACGGAGACTACAGC+AGG | + | chr1_2:52981746-52981765 | Msa0076700:CDS | 55.0% | |
AATTCAACCTCCCTCTCCGG+CGG | - | chr1_2:52982130-52982149 | None:intergenic | 55.0% | |
GCTCCCCAAGGTGAAACACT+TGG | - | chr1_2:52982274-52982293 | None:intergenic | 55.0% | |
TATTGGGCCACCTACCGCGA+CGG | + | chr1_2:52978866-52978885 | Msa0076700:intron | 60.0% | |
TCCAAAACCGTCGCGGTAGG+TGG | - | chr1_2:52978876-52978895 | None:intergenic | 60.0% | |
AGCCACTGCCCTCAACAACC+TGG | - | chr1_2:52979476-52979495 | None:intergenic | 60.0% | |
GTATCCCGTGAAGGGGATGC+TGG | - | chr1_2:52979580-52979599 | None:intergenic | 60.0% | |
!! | CATCAGGAAGTGTCTGCCGC+CGG | + | chr1_2:52982111-52982130 | Msa0076700:intron | 60.0% |
! | TGTTTCACCTTGGGGAGCGC+CGG | + | chr1_2:52982276-52982295 | Msa0076700:CDS | 60.0% |
AACAATACCGGCGCTCCCCA+AGG | - | chr1_2:52982286-52982305 | None:intergenic | 60.0% | |
!! | TTGGGGAGCGCCGGTATTGT+TGG | + | chr1_2:52982285-52982304 | Msa0076700:CDS | 60.0% |
ACACACGTGCACCCACTAGC+TGG | - | chr1_2:52982417-52982436 | None:intergenic | 60.0% | |
! | GCCACCTACCGCGACGGTTT+TGG | + | chr1_2:52978872-52978891 | Msa0076700:intron | 65.0% |
! | GAAGTGTCTGCCGCCGGAGA+GGG | + | chr1_2:52982117-52982136 | Msa0076700:intron | 65.0% |
!! | GGAAGTGTCTGCCGCCGGAG+AGG | + | chr1_2:52982116-52982135 | Msa0076700:intron | 70.0% |
GTGTCTGCCGCCGGAGAGGG+AGG | + | chr1_2:52982120-52982139 | Msa0076700:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 52978138 | 52983099 | 52978138 | ID=Msa0076700;Name=Msa0076700 |
chr1_2 | mRNA | 52978138 | 52983099 | 52978138 | ID=Msa0076700-mRNA-1;Parent=Msa0076700;Name=Msa0076700-mRNA-1;_AED=0.17;_eAED=0.17;_QI=196|0.45|0.41|0.66|0.90|0.83|12|0|770 |
chr1_2 | exon | 52978138 | 52978313 | 52978138 | ID=Msa0076700-mRNA-1:exon:16376;Parent=Msa0076700-mRNA-1 |
chr1_2 | exon | 52978464 | 52978531 | 52978464 | ID=Msa0076700-mRNA-1:exon:16377;Parent=Msa0076700-mRNA-1 |
chr1_2 | exon | 52979466 | 52979628 | 52979466 | ID=Msa0076700-mRNA-1:exon:16378;Parent=Msa0076700-mRNA-1 |
chr1_2 | exon | 52979730 | 52979927 | 52979730 | ID=Msa0076700-mRNA-1:exon:16379;Parent=Msa0076700-mRNA-1 |
chr1_2 | exon | 52980024 | 52980775 | 52980024 | ID=Msa0076700-mRNA-1:exon:16380;Parent=Msa0076700-mRNA-1 |
chr1_2 | exon | 52981009 | 52981182 | 52981009 | ID=Msa0076700-mRNA-1:exon:16381;Parent=Msa0076700-mRNA-1 |
chr1_2 | exon | 52981297 | 52981413 | 52981297 | ID=Msa0076700-mRNA-1:exon:16382;Parent=Msa0076700-mRNA-1 |
chr1_2 | exon | 52981609 | 52981788 | 52981609 | ID=Msa0076700-mRNA-1:exon:16383;Parent=Msa0076700-mRNA-1 |
chr1_2 | exon | 52982121 | 52982332 | 52982121 | ID=Msa0076700-mRNA-1:exon:16384;Parent=Msa0076700-mRNA-1 |
chr1_2 | exon | 52982441 | 52982540 | 52982441 | ID=Msa0076700-mRNA-1:exon:16385;Parent=Msa0076700-mRNA-1 |
chr1_2 | exon | 52982663 | 52982724 | 52982663 | ID=Msa0076700-mRNA-1:exon:16386;Parent=Msa0076700-mRNA-1 |
chr1_2 | exon | 52982793 | 52983099 | 52982793 | ID=Msa0076700-mRNA-1:exon:16387;Parent=Msa0076700-mRNA-1 |
chr1_2 | five_prime_UTR | 52978138 | 52978313 | 52978138 | ID=Msa0076700-mRNA-1:five_prime_utr;Parent=Msa0076700-mRNA-1 |
chr1_2 | five_prime_UTR | 52978464 | 52978483 | 52978464 | ID=Msa0076700-mRNA-1:five_prime_utr;Parent=Msa0076700-mRNA-1 |
chr1_2 | CDS | 52978484 | 52978531 | 52978484 | ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1 |
chr1_2 | CDS | 52979466 | 52979628 | 52979466 | ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1 |
chr1_2 | CDS | 52979730 | 52979927 | 52979730 | ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1 |
chr1_2 | CDS | 52980024 | 52980775 | 52980024 | ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1 |
chr1_2 | CDS | 52981009 | 52981182 | 52981009 | ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1 |
chr1_2 | CDS | 52981297 | 52981413 | 52981297 | ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1 |
chr1_2 | CDS | 52981609 | 52981788 | 52981609 | ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1 |
chr1_2 | CDS | 52982121 | 52982332 | 52982121 | ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1 |
chr1_2 | CDS | 52982441 | 52982540 | 52982441 | ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1 |
chr1_2 | CDS | 52982663 | 52982724 | 52982663 | ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1 |
chr1_2 | CDS | 52982793 | 52983099 | 52982793 | ID=Msa0076700-mRNA-1:cds;Parent=Msa0076700-mRNA-1 |
Gene Sequence |
Protein sequence |