Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974370 | XP_024641713.2 | 97.534 | 730 | 18 | 0 | 1 | 730 | 1 | 730 | 0.0 | 1484 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974370 | sp|Q9ZVH4|CUL3A_ARATH | 75.446 | 729 | 178 | 1 | 2 | 730 | 5 | 732 | 0.0 | 1178 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974370 | A0A396HFG7 | 97.534 | 730 | 18 | 0 | 1 | 730 | 1 | 730 | 0.0 | 1484 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002560 | Msa0974370 | 0.808207 | 3.468357e-50 | -8.615850e-47 |
| Msa0038000 | Msa0974370 | 0.820716 | 5.920473e-53 | -8.615850e-47 |
| Msa0055660 | Msa0974370 | 0.800506 | 1.396086e-48 | -8.615850e-47 |
| Msa0091500 | Msa0974370 | 0.826142 | 3.190618e-54 | -8.615850e-47 |
| Msa0097950 | Msa0974370 | 0.847092 | 1.439091e-59 | -8.615850e-47 |
| Msa0115460 | Msa0974370 | 0.823074 | 1.684638e-53 | -8.615850e-47 |
| Msa0641140 | Msa0974370 | 0.800190 | 1.619023e-48 | -8.615850e-47 |
| Msa0796440 | Msa0974370 | 0.811075 | 8.392173e-51 | -8.615850e-47 |
| Msa0224030 | Msa0974370 | 0.811450 | 6.957362e-51 | -8.615850e-47 |
| Msa0237200 | Msa0974370 | 0.811735 | 6.033473e-51 | -8.615850e-47 |
| Msa0376020 | Msa0974370 | 0.813804 | 2.125885e-51 | -8.615850e-47 |
| Msa0259270 | Msa0974370 | 0.814773 | 1.298993e-51 | -8.615850e-47 |
| Msa0274970 | Msa0974370 | 0.802366 | 5.804961e-49 | -8.615850e-47 |
| Msa0324240 | Msa0974370 | 0.812484 | 4.141485e-51 | -8.615850e-47 |
| Msa0516020 | Msa0974370 | 0.815496 | 8.974531e-52 | -8.615850e-47 |
| Msa0580640 | Msa0974370 | 0.806233 | 9.088212e-50 | -8.615850e-47 |
| Msa0881580 | Msa0974370 | 0.811132 | 8.158596e-51 | -8.615850e-47 |
| Msa0897400 | Msa0974370 | 0.802109 | 6.556609e-49 | -8.615850e-47 |
| Msa0937050 | Msa0974370 | 0.839211 | 1.814276e-57 | -8.615850e-47 |
| Msa0974370 | Msa1125470 | 0.808131 | 3.600755e-50 | -8.615850e-47 |
| Msa0974370 | Msa1125550 | 0.812671 | 3.770570e-51 | -8.615850e-47 |
| Msa0974370 | Msa1133400 | 0.803069 | 4.156790e-49 | -8.615850e-47 |
| Msa0974370 | Msa1255370 | 0.803855 | 2.856706e-49 | -8.615850e-47 |
| Msa0974370 | Msa1435770 | 0.822184 | 2.713872e-53 | -8.615850e-47 |
| Msa0974370 | Msa1448490 | 0.823938 | 1.057804e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974370 | MtrunA17_Chr6g0453061 | 97.534 | 730 | 18 | 0 | 1 | 730 | 1 | 730 | 0.0 | 1484 |
| Msa0974370 | MtrunA17_Chr6g0453081 | 86.986 | 730 | 95 | 0 | 1 | 730 | 1 | 730 | 0.0 | 1309 |
| Msa0974370 | MtrunA17_Chr8g0361901 | 77.915 | 729 | 160 | 1 | 2 | 730 | 4 | 731 | 0.0 | 1197 |
| Msa0974370 | MtrunA17_Chr5g0416711 | 71.193 | 729 | 209 | 1 | 2 | 730 | 5 | 732 | 0.0 | 1108 |
| Msa0974370 | MtrunA17_Chr1g0166181 | 67.720 | 728 | 228 | 4 | 6 | 730 | 16 | 739 | 0.0 | 1024 |
| Msa0974370 | MtrunA17_Chr1g0166131 | 66.484 | 728 | 237 | 4 | 6 | 730 | 17 | 740 | 0.0 | 998 |
| Msa0974370 | MtrunA17_Chr7g0231701 | 66.960 | 681 | 213 | 3 | 50 | 730 | 40 | 708 | 0.0 | 947 |
| Msa0974370 | MtrunA17_Chr1g0166141 | 68.114 | 599 | 188 | 2 | 134 | 730 | 77 | 674 | 0.0 | 845 |
| Msa0974370 | MtrunA17_Chr1g0166141 | 68.421 | 76 | 24 | 0 | 275 | 350 | 1 | 76 | 6.80e-27 | 116 |
| Msa0974370 | MtrunA17_Chr7g0231741 | 77.480 | 373 | 83 | 1 | 358 | 730 | 4 | 375 | 0.0 | 622 |
| Msa0974370 | MtrunA17_Chr2g0285881 | 40.897 | 736 | 409 | 13 | 4 | 730 | 74 | 792 | 0.0 | 542 |
| Msa0974370 | MtrunA17_Chr5g0416691 | 57.426 | 404 | 165 | 4 | 329 | 730 | 3 | 401 | 2.96e-164 | 479 |
| Msa0974370 | MtrunA17_Chr5g0416731 | 57.971 | 414 | 129 | 2 | 50 | 418 | 25 | 438 | 1.20e-162 | 477 |
| Msa0974370 | MtrunA17_Chr7g0231791 | 56.931 | 404 | 167 | 4 | 329 | 730 | 3 | 401 | 1.02e-161 | 472 |
| Msa0974370 | MtrunA17_Chr5g0416831 | 66.361 | 327 | 72 | 3 | 404 | 730 | 1 | 289 | 5.09e-149 | 436 |
| Msa0974370 | MtrunA17_Chr7g0231751 | 64.706 | 306 | 108 | 0 | 2 | 307 | 5 | 310 | 2.33e-141 | 417 |
| Msa0974370 | MtrunA17_Chr7g0231721 | 61.702 | 329 | 119 | 2 | 50 | 377 | 25 | 347 | 1.97e-140 | 416 |
| Msa0974370 | MtrunA17_Chr5g0416901 | 60.568 | 317 | 124 | 1 | 52 | 368 | 21 | 336 | 3.71e-136 | 405 |
| Msa0974370 | MtrunA17_Chr7g0231581 | 60.064 | 313 | 124 | 1 | 56 | 368 | 1 | 312 | 8.27e-132 | 393 |
| Msa0974370 | MtrunA17_Chr2g0296381 | 33.244 | 743 | 451 | 14 | 23 | 730 | 10 | 742 | 3.23e-129 | 400 |
| Msa0974370 | MtrunA17_Chr4g0067011 | 32.976 | 746 | 449 | 14 | 23 | 730 | 12 | 744 | 1.14e-126 | 394 |
| Msa0974370 | MtrunA17_Chr7g0231571 | 60.744 | 242 | 94 | 1 | 56 | 297 | 1 | 241 | 1.93e-99 | 306 |
| Msa0974370 | MtrunA17_Chr5g0416911 | 58.943 | 246 | 100 | 1 | 52 | 297 | 5 | 249 | 2.05e-97 | 301 |
| Msa0974370 | MtrunA17_Chr7g0268881 | 39.594 | 394 | 223 | 7 | 344 | 730 | 4 | 389 | 3.63e-80 | 261 |
| Msa0974370 | MtrunA17_Chr7g0231801 | 51.394 | 251 | 120 | 2 | 56 | 304 | 1 | 251 | 8.67e-79 | 253 |
| Msa0974370 | MtrunA17_Chr5g0416681 | 51.394 | 251 | 120 | 2 | 56 | 304 | 1 | 251 | 6.54e-78 | 250 |
| Msa0974370 | MtrunA17_Chr5g0416931 | 62.424 | 165 | 62 | 0 | 50 | 214 | 38 | 202 | 8.77e-67 | 219 |
| Msa0974370 | MtrunA17_Chr1g0166151 | 57.143 | 182 | 77 | 1 | 80 | 261 | 1 | 181 | 4.27e-64 | 211 |
| Msa0974370 | MtrunA17_Chr7g0231561 | 60.377 | 159 | 63 | 0 | 56 | 214 | 1 | 159 | 1.07e-62 | 206 |
| Msa0974370 | MtrunA17_Chr7g0268891 | 29.260 | 311 | 201 | 6 | 23 | 317 | 9 | 316 | 1.40e-41 | 155 |
| Msa0974370 | MtrunA17_Chr5g0416841 | 64.211 | 95 | 34 | 0 | 204 | 298 | 14 | 108 | 1.32e-35 | 130 |
| Msa0974370 | MtrunA17_Chr5g0416721 | 68.627 | 51 | 16 | 0 | 1 | 51 | 4 | 54 | 4.41e-19 | 81.6 |
| Msa0974370 | MtrunA17_Chr7g0231731 | 64.706 | 51 | 18 | 0 | 1 | 51 | 4 | 54 | 1.09e-17 | 77.8 |
| Msa0974370 | MtrunA17_Chr7g0231711 | 56.000 | 50 | 21 | 1 | 2 | 51 | 5 | 53 | 2.46e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974370 | AT1G26830.1 | 75.446 | 729 | 178 | 1 | 2 | 730 | 5 | 732 | 0.0 | 1178 |
| Msa0974370 | AT1G69670.1 | 74.897 | 729 | 182 | 1 | 2 | 730 | 5 | 732 | 0.0 | 1162 |
| Msa0974370 | AT1G69670.2 | 74.897 | 729 | 182 | 1 | 2 | 730 | 5 | 732 | 0.0 | 1162 |
| Msa0974370 | AT5G46210.1 | 41.201 | 733 | 411 | 13 | 4 | 730 | 74 | 792 | 1.08e-175 | 523 |
| Msa0974370 | AT4G02570.4 | 34.605 | 708 | 426 | 13 | 49 | 730 | 42 | 738 | 2.08e-134 | 414 |
| Msa0974370 | AT4G02570.2 | 34.605 | 708 | 426 | 13 | 49 | 730 | 42 | 738 | 2.08e-134 | 414 |
| Msa0974370 | AT4G02570.1 | 34.605 | 708 | 426 | 13 | 49 | 730 | 42 | 738 | 2.08e-134 | 414 |
| Msa0974370 | AT4G02570.3 | 34.605 | 708 | 426 | 13 | 49 | 730 | 42 | 738 | 2.08e-134 | 414 |
| Msa0974370 | AT1G02980.1 | 33.380 | 716 | 429 | 14 | 48 | 730 | 42 | 742 | 1.20e-118 | 374 |
| Msa0974370 | AT1G02980.2 | 33.380 | 716 | 429 | 14 | 48 | 730 | 42 | 742 | 1.20e-118 | 374 |
| Msa0974370 | AT1G43140.1 | 32.908 | 705 | 416 | 16 | 49 | 730 | 51 | 721 | 5.51e-108 | 345 |
| Msa0974370 | AT1G59790.2 | 27.469 | 324 | 219 | 7 | 49 | 363 | 48 | 364 | 3.56e-33 | 132 |
| Msa0974370 | AT1G59790.1 | 26.415 | 318 | 218 | 7 | 49 | 357 | 48 | 358 | 7.93e-30 | 122 |
| Msa0974370 | AT1G59800.1 | 27.536 | 207 | 144 | 3 | 49 | 251 | 43 | 247 | 1.80e-22 | 97.8 |
| Msa0974370 | AT4G12100.1 | 23.269 | 361 | 237 | 11 | 21 | 365 | 76 | 412 | 1.08e-17 | 86.7 |
Find 159 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCATCGTTGGAGAATT+TGG | 0.044642 | 6_4:-7380792 | None:intergenic |
| ACAGGATCTTTCAACCTTTC+AGG | 0.150230 | 6_4:-7383910 | None:intergenic |
| AATATGGTGCTACATAAATT+TGG | 0.153660 | 6_4:+7383115 | Msa0974370:CDS |
| AAATTCCCATTCACACTTCT+AGG | 0.220737 | 6_4:+7380740 | Msa0974370:five_prime_UTR |
| ATTGACGTGGCAAGCTAATA+TGG | 0.230633 | 6_4:+7384548 | Msa0974370:CDS |
| TATGGGGAATGCTGATTTAA+AGG | 0.232083 | 6_4:+7384566 | Msa0974370:CDS |
| AATTAAGATGCTGACGGATT+TGG | 0.234870 | 6_4:+7383483 | Msa0974370:CDS |
| TCAGCTTTGAAGAGCTTTAT+AGG | 0.248136 | 6_4:+7380937 | Msa0974370:CDS |
| CTAGCAAAGAGGCTTCTTTC+GGG | 0.256381 | 6_4:+7384222 | Msa0974370:CDS |
| AAACTTCGTAGAGGGATAAA+AGG | 0.263934 | 6_4:+7384099 | Msa0974370:CDS |
| TTTGTAGAAACTTGAATAAA+AGG | 0.270110 | 6_4:-7383538 | None:intergenic |
| ATGAACTCGGTTTGAATCTA+TGG | 0.288612 | 6_4:+7383344 | Msa0974370:CDS |
| ATATGGTGCTACATAAATTT+GGG | 0.301338 | 6_4:+7383116 | Msa0974370:CDS |
| TTGTTTCGTAGGGTACCTTC+TGG | 0.309037 | 6_4:+7383820 | Msa0974370:CDS |
| ATTAAGATGCTGACGGATTT+GGG | 0.311827 | 6_4:+7383484 | Msa0974370:CDS |
| GTCAACAAACTAGGCTTGTT+AGG | 0.325213 | 6_4:+7385282 | Msa0974370:three_prime_UTR |
| TCTTCATCGTTGGAGAATTT+GGG | 0.332605 | 6_4:-7380791 | None:intergenic |
| TACTGGTAAGCAGTTAATTA+TGG | 0.332800 | 6_4:+7383885 | Msa0974370:CDS |
| CCTAGCAAAGAGGCTTCTTT+CGG | 0.333153 | 6_4:+7384221 | Msa0974370:CDS |
| GTTCAGGAATGCTTATAATA+TGG | 0.335111 | 6_4:+7383099 | Msa0974370:intron |
| AAACATTCAGCTCATGCTTC+TGG | 0.345881 | 6_4:-7384605 | None:intergenic |
| TCAGAAACTAGGGTTTCATT+TGG | 0.354767 | 6_4:-7380718 | None:intergenic |
| CAAACACATCCTTCTCTTGC+AGG | 0.358631 | 6_4:-7384179 | None:intergenic |
| AGAGTTCATTTCTTTGTTTG+TGG | 0.365470 | 6_4:+7384071 | Msa0974370:CDS |
| CTAGGGTTTCATTTGGGAAA+TGG | 0.369545 | 6_4:-7380711 | None:intergenic |
| GCTGATTTAAAGGCTACATT+TGG | 0.371270 | 6_4:+7384576 | Msa0974370:CDS |
| TAGTCTTAGTTTCGTTAGAA+TGG | 0.378273 | 6_4:-7383381 | None:intergenic |
| GGAAGATTACATTGCGGACT+AGG | 0.395922 | 6_4:-7384459 | None:intergenic |
| CAGAAACTAGGGTTTCATTT+GGG | 0.396504 | 6_4:-7380717 | None:intergenic |
| GTAATCTTCCATCTGAAATC+CGG | 0.403875 | 6_4:+7384472 | Msa0974370:CDS |
| TTGTTAGGGTCACTTCTGTT+TGG | 0.404372 | 6_4:+7385297 | Msa0974370:three_prime_UTR |
| TCATTTGCAATGCCTTGTTA+TGG | 0.406474 | 6_4:-7383258 | None:intergenic |
| ATTCACTAGCAAGCTCTTCA+AGG | 0.417223 | 6_4:+7384833 | Msa0974370:CDS |
| TCAGATATGTCCTTGCTCAT+TGG | 0.420832 | 6_4:-7384783 | None:intergenic |
| AGCAGCTCATGGTGCTGAGT+TGG | 0.421446 | 6_4:+7384380 | Msa0974370:CDS |
| TATCCACACTCTCGTTCATA+TGG | 0.433213 | 6_4:+7383732 | Msa0974370:CDS |
| ATTGCTTTCTTCTTCATCGT+TGG | 0.435119 | 6_4:-7380801 | None:intergenic |
| AACTTCGTAGAGGGATAAAA+GGG | 0.437841 | 6_4:+7384100 | Msa0974370:CDS |
| GAGGCGTTTAAATGAAGAAA+TGG | 0.441848 | 6_4:+7383630 | Msa0974370:CDS |
| GCAGCTCATGGTGCTGAGTT+GGG | 0.442390 | 6_4:+7384381 | Msa0974370:CDS |
| GACTTCTTATGATATGATGC+AGG | 0.444611 | 6_4:+7384350 | Msa0974370:CDS |
| TTTAAAGGCTACATTTGGTA+AGG | 0.448303 | 6_4:+7384581 | Msa0974370:CDS |
| ATTGTAGAAGCTACTTTCAC+AGG | 0.448647 | 6_4:-7385456 | None:intergenic |
| TGTTTCGTAGGGTACCTTCT+GGG | 0.451428 | 6_4:+7383821 | Msa0974370:CDS |
| ATTCTGAAATGACTTGTCAT+TGG | 0.452379 | 6_4:-7383998 | None:intergenic |
| TTCAAACCGAGTTCATGAAC+AGG | 0.455187 | 6_4:-7383337 | None:intergenic |
| CGTTGGAGAATTTGGGAAAA+CGG | 0.459338 | 6_4:-7380784 | None:intergenic |
| TTGTGAGGGTAATGAAATCT+AGG | 0.460014 | 6_4:+7384958 | Msa0974370:CDS |
| TTGACGTGGCAAGCTAATAT+GGG | 0.461661 | 6_4:+7384549 | Msa0974370:CDS |
| TCTGTCCAGGTGCTTACAAC+AGG | 0.465386 | 6_4:+7384420 | Msa0974370:CDS |
| ATATCAATTCACTTCTAAGT+TGG | 0.468165 | 6_4:+7384305 | Msa0974370:CDS |
| AGGGACTGTTGTTGCACAAA+GGG | 0.470120 | 6_4:+7384863 | Msa0974370:CDS |
| AAGTTTCGTAATTATTATCT+CGG | 0.473608 | 6_4:+7384507 | Msa0974370:CDS |
| CAGTCGTTGGCCTTAGTCAA+AGG | 0.474202 | 6_4:+7384738 | Msa0974370:CDS |
| CAGGGTTTCTTAGCAGCTCA+TGG | 0.476009 | 6_4:+7384369 | Msa0974370:CDS |
| AAGGCTTCTCAAAGTCAGTC+TGG | 0.477739 | 6_4:-7383519 | None:intergenic |
| AATTCCCATTCACACTTCTA+GGG | 0.483028 | 6_4:+7380741 | Msa0974370:five_prime_UTR |
| ATATTCAAATGCAGAATTCA+AGG | 0.485048 | 6_4:-7384022 | None:intergenic |
| TAATCTTCCATCTGAAATCC+GGG | 0.485583 | 6_4:+7384473 | Msa0974370:CDS |
| AATGGGAATTTCAGAAACTA+GGG | 0.488922 | 6_4:-7380728 | None:intergenic |
| TCAATTCACTTCTAAGTTGG+AGG | 0.491593 | 6_4:+7384308 | Msa0974370:CDS |
| TGGAGGAACTCAACAGGAAG+TGG | 0.491844 | 6_4:+7383230 | Msa0974370:CDS |
| AGGTGCTTACAACAGGTTCA+TGG | 0.492266 | 6_4:+7384427 | Msa0974370:CDS |
| GAATGTATAACTTGTTTCGT+AGG | 0.493143 | 6_4:+7383809 | Msa0974370:CDS |
| GATAAAAGGGGTTGGTGAGG+AGG | 0.495340 | 6_4:+7384113 | Msa0974370:CDS |
| AGTCGTTGGCCTTAGTCAAA+GGG | 0.498877 | 6_4:+7384739 | Msa0974370:CDS |
| GAAAACCCTAGAAGTGTGAA+TGG | 0.498973 | 6_4:-7380746 | None:intergenic |
| CCGAAAGAAGCCTCTTTGCT+AGG | 0.499740 | 6_4:-7384221 | None:intergenic |
| CCGAGACATACTCATGTACA+TGG | 0.503098 | 6_4:+7383282 | Msa0974370:CDS |
| GAAGAGGTGCCTTCAGTCGT+TGG | 0.504097 | 6_4:+7384725 | Msa0974370:CDS |
| CTGCAGCTGCTTCGTGACCT+CGG | 0.504915 | 6_4:-7385009 | None:intergenic |
| CATTGCGGACTAGGTTGAGT+TGG | 0.504999 | 6_4:-7384450 | None:intergenic |
| CATCAATGAGCATATTAACT+AGG | 0.505030 | 6_4:-7383765 | None:intergenic |
| AGAAATGAACTCTGGAGATC+GGG | 0.506629 | 6_4:-7384061 | None:intergenic |
| AAGAAATGAACTCTGGAGAT+CGG | 0.506678 | 6_4:-7384062 | None:intergenic |
| AGGGATAAAAGGGGTTGGTG+AGG | 0.506807 | 6_4:+7384110 | Msa0974370:CDS |
| GGAGAGAGTATCTCACTACT+TGG | 0.507157 | 6_4:+7383651 | Msa0974370:CDS |
| CGAGGTCACGAAGCAGCTGC+AGG | 0.512795 | 6_4:+7385010 | Msa0974370:CDS |
| TTTGGGGAGAAACTTTACTC+TGG | 0.520439 | 6_4:+7383133 | Msa0974370:CDS |
| CAGTTAAAACAATTTCATCA+TGG | 0.521284 | 6_4:+7385204 | Msa0974370:three_prime_UTR |
| TCAACAAACTAGGCTTGTTA+GGG | 0.523908 | 6_4:+7385283 | Msa0974370:three_prime_UTR |
| GAATGGGAATTTCAGAAACT+AGG | 0.526336 | 6_4:-7380729 | None:intergenic |
| CATCCTTCTCTTGCAGGTAC+CGG | 0.527813 | 6_4:-7384173 | None:intergenic |
| AATGTATAACTTGTTTCGTA+GGG | 0.534146 | 6_4:+7383810 | Msa0974370:CDS |
| TTAATCATTGTGAGCCCAGA+AGG | 0.537256 | 6_4:-7383835 | None:intergenic |
| ACAAACAAAGAAATGAACTC+TGG | 0.544090 | 6_4:-7384069 | None:intergenic |
| AGACAGAAAGCCGCAGATTG+AGG | 0.544522 | 6_4:+7384929 | Msa0974370:CDS |
| CAATCAATCAAAGCTGCTCA+AGG | 0.545434 | 6_4:+7383196 | Msa0974370:CDS |
| TATAGAAACTCGACAAAGAG+TGG | 0.546676 | 6_4:+7384902 | Msa0974370:CDS |
| TTTGGTAGAACTGAAAGTGA+AGG | 0.548386 | 6_4:-7380682 | None:intergenic |
| TGCTGATCGGATGACTTGTA+AGG | 0.549561 | 6_4:+7384665 | Msa0974370:CDS |
| AAAACCCTAGAAGTGTGAAT+GGG | 0.550472 | 6_4:-7380745 | None:intergenic |
| TTAATTGAATCATGTGATTG+TGG | 0.550947 | 6_4:+7383586 | Msa0974370:CDS |
| CATAGACCCCGGATTTCAGA+TGG | 0.553988 | 6_4:-7384480 | None:intergenic |
| TGACTAAGGCCAACGACTGA+AGG | 0.554710 | 6_4:-7384734 | None:intergenic |
| AAAGCATTAGTACACACATC+TGG | 0.555795 | 6_4:-7384635 | None:intergenic |
| CTTAAGCTCAAAACAGAATG+TGG | 0.557946 | 6_4:+7384282 | Msa0974370:CDS |
| TAGCCCTACACTATCTGTCC+AGG | 0.560211 | 6_4:+7384407 | Msa0974370:CDS |
| TACCTATGTCAGACTTGAAG+AGG | 0.561746 | 6_4:+7384709 | Msa0974370:CDS |
| ATTTACAATCGTAACGCTAG+TGG | 0.563604 | 6_4:+7380912 | Msa0974370:CDS |
| TTAAAGGCTACATTTGGTAA+GGG | 0.566080 | 6_4:+7384582 | Msa0974370:CDS |
| ATGAACCTGTTGTAAGCACC+TGG | 0.566331 | 6_4:-7384425 | None:intergenic |
| CAATTCACTTCTAAGTTGGA+GGG | 0.568094 | 6_4:+7384309 | Msa0974370:CDS |
| TGATGACAAATATGATGACT+TGG | 0.569545 | 6_4:+7383783 | Msa0974370:CDS |
| TTGACCTTGTGCTTAAAGAG+AGG | 0.571221 | 6_4:+7383422 | Msa0974370:CDS |
| TTGCGCATAGTCAACAAACT+AGG | 0.572057 | 6_4:+7385273 | Msa0974370:three_prime_UTR |
| GAGGGTAATGAAATCTAGGC+GGG | 0.574043 | 6_4:+7384962 | Msa0974370:CDS |
| CATTCCTCTCTTTAAGCACA+AGG | 0.575206 | 6_4:-7383426 | None:intergenic |
| AAAACCCCTGTTCATGAACT+CGG | 0.575625 | 6_4:+7383331 | Msa0974370:CDS |
| AGACGCTGCACAAAATCGAC+AGG | 0.580439 | 6_4:-7383928 | None:intergenic |
| TTTCCGGTACCTGCAAGAGA+AGG | 0.581468 | 6_4:+7384170 | Msa0974370:CDS |
| ACTTCTTATGATATGATGCA+GGG | 0.582653 | 6_4:+7384351 | Msa0974370:CDS |
| CCATGTACATGAGTATGTCT+CGG | 0.582690 | 6_4:-7383282 | None:intergenic |
| TGGATGACAAACTTCGTAGA+GGG | 0.586598 | 6_4:+7384091 | Msa0974370:CDS |
| TTGTCTCAGATGAGCAGTAA+CGG | 0.592895 | 6_4:-7383167 | None:intergenic |
| TTGTAGAAGCTACTTTCACA+GGG | 0.595239 | 6_4:-7385455 | None:intergenic |
| CGTAGAGGGATAAAAGGGGT+TGG | 0.600611 | 6_4:+7384105 | Msa0974370:CDS |
| TTATAAGCACCGTGTAGTTG+TGG | 0.601194 | 6_4:+7380836 | Msa0974370:CDS |
| CTCGTTCATATGGAGAACTC+AGG | 0.601425 | 6_4:+7383742 | Msa0974370:CDS |
| AGATTGAGGCAGCAGTTGTG+AGG | 0.601444 | 6_4:+7384943 | Msa0974370:CDS |
| GAACTTAATTAAGATGCTGA+CGG | 0.603217 | 6_4:+7383477 | Msa0974370:CDS |
| AGTTAATTATGGATCCTGAA+AGG | 0.604723 | 6_4:+7383896 | Msa0974370:CDS |
| TAGGGACTGTTGTTGCACAA+AGG | 0.608557 | 6_4:+7384862 | Msa0974370:CDS |
| CACCTCTTCAAGTCTGACAT+AGG | 0.609725 | 6_4:-7384711 | None:intergenic |
| TCGGAAAGAGCCAATGAGCA+AGG | 0.610423 | 6_4:+7384773 | Msa0974370:CDS |
| TCTCCATATGAACGAGAGTG+TGG | 0.611580 | 6_4:-7383735 | None:intergenic |
| GACTTGTAAGGAGATAGAGC+AGG | 0.614296 | 6_4:+7384677 | Msa0974370:CDS |
| TATGGTGCTACATAAATTTG+GGG | 0.615594 | 6_4:+7383117 | Msa0974370:CDS |
| GATTGAGGCAGCAGTTGTGA+GGG | 0.621169 | 6_4:+7384944 | Msa0974370:CDS |
| TAGCAAAGAGGCTTCTTTCG+GGG | 0.621837 | 6_4:+7384223 | Msa0974370:CDS |
| TCAAACCGAGTTCATGAACA+GGG | 0.622291 | 6_4:-7383336 | None:intergenic |
| ATAAGCAACACCTAGCAAAG+AGG | 0.626717 | 6_4:+7384211 | Msa0974370:CDS |
| GTCAGAGATAACTAGTGTGG+TGG | 0.630259 | 6_4:+7383687 | Msa0974370:CDS |
| TTATTAACAGAGGCTTGATG+AGG | 0.631918 | 6_4:+7383455 | Msa0974370:CDS |
| AATGGTGAAGTTATTAACAG+AGG | 0.635361 | 6_4:+7383445 | Msa0974370:CDS |
| TACTGTTTCAAGCAAGATAG+CGG | 0.637161 | 6_4:-7385130 | None:intergenic |
| ACAACTGCTGCCTCAATCTG+CGG | 0.637760 | 6_4:-7384939 | None:intergenic |
| GAAACTTCTCACATAGACCC+CGG | 0.641304 | 6_4:-7384491 | None:intergenic |
| GGAGGAACTCAACAGGAAGT+GGG | 0.642357 | 6_4:+7383231 | Msa0974370:CDS |
| GTGGATGACAAACTTCGTAG+AGG | 0.651149 | 6_4:+7384090 | Msa0974370:CDS |
| GGGGAAGACTGTATCAGATG+AGG | 0.654353 | 6_4:+7384242 | Msa0974370:CDS |
| TGACGTGGCAAGCTAATATG+GGG | 0.657176 | 6_4:+7384550 | Msa0974370:CDS |
| ATTCTAACGAAACTAAGACT+AGG | 0.662282 | 6_4:+7383383 | Msa0974370:CDS |
| CAAACCGAGTTCATGAACAG+GGG | 0.670297 | 6_4:-7383335 | None:intergenic |
| TGAGTCAGAGATAACTAGTG+TGG | 0.673139 | 6_4:+7383684 | Msa0974370:CDS |
| AGTTAGGATCCACAACTACA+CGG | 0.678703 | 6_4:-7380845 | None:intergenic |
| AGAAACTCGACAAAGAGTGG+AGG | 0.680888 | 6_4:+7384905 | Msa0974370:CDS |
| AGCACCTGGACAGATAGTGT+AGG | 0.681962 | 6_4:-7384411 | None:intergenic |
| ACATAATAATGTCATCGCCG+AGG | 0.682843 | 6_4:+7384992 | Msa0974370:CDS |
| TATTATCTCGGCGCTCACAG+TGG | 0.685408 | 6_4:+7384519 | Msa0974370:CDS |
| TCAGATGGAAGATTACATTG+CGG | 0.706660 | 6_4:-7384465 | None:intergenic |
| AATCTTCCATCTGAAATCCG+GGG | 0.712246 | 6_4:+7384474 | Msa0974370:CDS |
| TGAGGGTAATGAAATCTAGG+CGG | 0.717066 | 6_4:+7384961 | Msa0974370:CDS |
| CTTGTGCTTAAAGAGAGGAA+TGG | 0.720232 | 6_4:+7383427 | Msa0974370:CDS |
| GAAGTGGGTAGACCATAACA+AGG | 0.733172 | 6_4:+7383246 | Msa0974370:CDS |
| ATTATCTGAAGAAAGCTGAG+AGG | 0.737332 | 6_4:+7383611 | Msa0974370:CDS |
| ACTTCGTAGAGGGATAAAAG+GGG | 0.737364 | 6_4:+7384101 | Msa0974370:CDS |
| ATATGACAAAGTTATCACAA+CGG | 0.738442 | 6_4:+7383969 | Msa0974370:CDS |
| ACAGTGGTAGGAGATTGACG+TGG | 0.831078 | 6_4:+7384535 | Msa0974370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTTTTTGTTAATTAATTT+TGG | + | chr6_4:7381008-7381027 | Msa0974370:intron | 10.0% |
| !!! | AGTTTTTGTTAATTAATTTT+GGG | + | chr6_4:7381009-7381028 | Msa0974370:intron | 10.0% |
| !!! | TTATTTTATATTTGATCATA+TGG | + | chr6_4:7381065-7381084 | Msa0974370:intron | 10.0% |
| !! | AAATTAATTTAGTAGTAATA+TGG | + | chr6_4:7381648-7381667 | Msa0974370:intron | 10.0% |
| !! | TTTATTCAAATTTAACTAAA+TGG | - | chr6_4:7382919-7382938 | None:intergenic | 10.0% |
| !!! | TAGTTTTTGTGAATTAATTT+TGG | + | chr6_4:7381038-7381057 | Msa0974370:intron | 15.0% |
| !!! | TTGTTTTTTATATGATGATA+TGG | + | chr6_4:7381494-7381513 | Msa0974370:intron | 15.0% |
| !!! | TTTCTATATTTTGTTTTTTG+AGG | + | chr6_4:7382467-7382486 | Msa0974370:intron | 15.0% |
| !!! | TTCTATATTTTGTTTTTTGA+GGG | + | chr6_4:7382468-7382487 | Msa0974370:intron | 15.0% |
| !!! | TTATAAAAATCCCATTTTTT+TGG | + | chr6_4:7382565-7382584 | Msa0974370:intron | 15.0% |
| !! | TAAAAGTAAACCAAAAAAAT+GGG | - | chr6_4:7382578-7382597 | None:intergenic | 15.0% |
| !! | ATAAAAGTAAACCAAAAAAA+TGG | - | chr6_4:7382579-7382598 | None:intergenic | 15.0% |
| !! | ATTAAATAAATTCAGATTGT+TGG | + | chr6_4:7382787-7382806 | Msa0974370:intron | 15.0% |
| !!! | ACATGATTCAATTAATTTTT+GGG | - | chr6_4:7383581-7383600 | None:intergenic | 15.0% |
| !! | ATGATCCATAAAATTGAAAA+AGG | - | chr6_4:7380984-7381003 | None:intergenic | 20.0% |
| !!! | AGTTAATTTTGTGATTGAAA+TGG | + | chr6_4:7381208-7381227 | Msa0974370:intron | 20.0% |
| !! | AAATGAAAATATTAGAGAGT+TGG | + | chr6_4:7381410-7381429 | Msa0974370:intron | 20.0% |
| !! | ATGATATATCTATGATGATA+TGG | + | chr6_4:7381729-7381748 | Msa0974370:intron | 20.0% |
| !! | TTTAAATTAAATTGTAGCTG+CGG | + | chr6_4:7382190-7382209 | Msa0974370:intron | 20.0% |
| !! | AATTTAAAAACCATGCTTTA+CGG | + | chr6_4:7382314-7382333 | Msa0974370:intron | 20.0% |
| !!! | TCTATATTTTGTTTTTTGAG+GGG | + | chr6_4:7382469-7382488 | Msa0974370:intron | 20.0% |
| !!! | GGGATTGTTTTATATTATTA+TGG | + | chr6_4:7382489-7382508 | Msa0974370:intron | 20.0% |
| !!! | CAATGATTTGTATTAGAAAA+TGG | + | chr6_4:7382603-7382622 | Msa0974370:intron | 20.0% |
| !! | AGTTATAGTGTATAACAATT+AGG | - | chr6_4:7383008-7383027 | None:intergenic | 20.0% |
| !! | TTTGTAGAAACTTGAATAAA+AGG | - | chr6_4:7383541-7383560 | None:intergenic | 20.0% |
| !!! | CACATGATTCAATTAATTTT+TGG | - | chr6_4:7383582-7383601 | None:intergenic | 20.0% |
| !! | AAGTTTCGTAATTATTATCT+CGG | + | chr6_4:7384507-7384526 | Msa0974370:CDS | 20.0% |
| !!! | TTTTTAATAACAACAGGATT+AGG | - | chr6_4:7385047-7385066 | None:intergenic | 20.0% |
| !!! | CTGTTTAAACAATTTTATCA+TGG | + | chr6_4:7385170-7385189 | Msa0974370:three_prime_UTR | 20.0% |
| !!! | TTTGGGAAATGGTTTTTTTT+TGG | - | chr6_4:7380703-7380722 | None:intergenic | 25.0% |
| !!! | CATCACCTTTTTCAATTTTA+TGG | + | chr6_4:7380976-7380995 | Msa0974370:intron | 25.0% |
| ! | TTTGATCATATGGATGATTA+TGG | + | chr6_4:7381075-7381094 | Msa0974370:intron | 25.0% |
| ! | AAATTATTGCTCAAGTTCAA+GGG | + | chr6_4:7381251-7381270 | Msa0974370:intron | 25.0% |
| !!! | GAATTACATTTTAACCTTTG+TGG | + | chr6_4:7381829-7381848 | Msa0974370:intron | 25.0% |
| ! | GAATCTTTAGTTACAAATAG+AGG | + | chr6_4:7381875-7381894 | Msa0974370:intron | 25.0% |
| ! | TTAACGTCTTTACAATCTTT+AGG | - | chr6_4:7382275-7382294 | None:intergenic | 25.0% |
| ! | TTGTAAAGACGTTAATATTG+AGG | + | chr6_4:7382280-7382299 | Msa0974370:intron | 25.0% |
| !! | ATTATTATGGTCTGTTTCTT+TGG | + | chr6_4:7382502-7382521 | Msa0974370:intron | 25.0% |
| !! | TTATTATGGTCTGTTTCTTT+GGG | + | chr6_4:7382503-7382522 | Msa0974370:intron | 25.0% |
| ! | AGAAATCAGAATACAGATAT+AGG | - | chr6_4:7382856-7382875 | None:intergenic | 25.0% |
| ! | TGCTATTCGTGTTATAAAAT+AGG | + | chr6_4:7382953-7382972 | Msa0974370:intron | 25.0% |
| ! | GCTATTCGTGTTATAAAATA+GGG | + | chr6_4:7382954-7382973 | Msa0974370:intron | 25.0% |
| ! | TATTTGGGCATATATGTATA+TGG | + | chr6_4:7383054-7383073 | Msa0974370:intron | 25.0% |
| ! | ATTTGGGCATATATGTATAT+GGG | + | chr6_4:7383055-7383074 | Msa0974370:intron | 25.0% |
| !!! | TAATCATAATTTGTTCGTTC+AGG | + | chr6_4:7383083-7383102 | Msa0974370:intron | 25.0% |
| !!! | AATATGGTGCTACATAAATT+TGG | + | chr6_4:7383115-7383134 | Msa0974370:CDS | 25.0% |
| !!! | ATATGGTGCTACATAAATTT+GGG | + | chr6_4:7383116-7383135 | Msa0974370:CDS | 25.0% |
| ! | TTAATTGAATCATGTGATTG+TGG | + | chr6_4:7383586-7383605 | Msa0974370:CDS | 25.0% |
| !!! | AATGTATAACTTGTTTCGTA+GGG | + | chr6_4:7383810-7383829 | Msa0974370:CDS | 25.0% |
| !! | ATGTCATGACTTCTTTTATA+CGG | + | chr6_4:7383860-7383879 | Msa0974370:CDS | 25.0% |
| ! | ATATGACAAAGTTATCACAA+CGG | + | chr6_4:7383969-7383988 | Msa0974370:CDS | 25.0% |
| ! | ATATTCAAATGCAGAATTCA+AGG | - | chr6_4:7384025-7384044 | None:intergenic | 25.0% |
| ! | ATATCAATTCACTTCTAAGT+TGG | + | chr6_4:7384305-7384324 | Msa0974370:CDS | 25.0% |
| !! | ATCCTGTTGTTATTAAAAAG+CGG | + | chr6_4:7385048-7385067 | Msa0974370:CDS | 25.0% |
| ! | CAGTTAAAACAATTTCATCA+TGG | + | chr6_4:7385204-7385223 | Msa0974370:three_prime_UTR | 25.0% |
| !! | CAGCATTATACTTTTCATTT+TGG | + | chr6_4:7385408-7385427 | Msa0974370:three_prime_UTR | 25.0% |
| AATGGGAATTTCAGAAACTA+GGG | - | chr6_4:7380731-7380750 | None:intergenic | 30.0% | |
| ! | TATGGATGATTATGGATTGA+TGG | + | chr6_4:7381083-7381102 | Msa0974370:intron | 30.0% |
| ! | ATGGATGATTATGGATTGAT+GGG | + | chr6_4:7381084-7381103 | Msa0974370:intron | 30.0% |
| AGAATTGCATTTCAATCTTG+AGG | + | chr6_4:7381167-7381186 | Msa0974370:intron | 30.0% | |
| GAAATTATTGCTCAAGTTCA+AGG | + | chr6_4:7381250-7381269 | Msa0974370:intron | 30.0% | |
| TATGGATGATTATGTCTTGA+TGG | + | chr6_4:7381512-7381531 | Msa0974370:intron | 30.0% | |
| ATGGATGATTATGTCTTGAT+GGG | + | chr6_4:7381513-7381532 | Msa0974370:intron | 30.0% | |
| TTTAACCTTTGTGGAATTTG+AGG | + | chr6_4:7381838-7381857 | Msa0974370:intron | 30.0% | |
| TTAATCCTCAAATTCCACAA+AGG | - | chr6_4:7381846-7381865 | None:intergenic | 30.0% | |
| !! | AAACTTTAAAGCTCTCACAA+TGG | - | chr6_4:7382172-7382191 | None:intergenic | 30.0% |
| TGTTGTATTGCTAAAACTTG+CGG | + | chr6_4:7382214-7382233 | Msa0974370:intron | 30.0% | |
| ! | TTTTAGTGCCTATTCTGTTT+TGG | + | chr6_4:7382651-7382670 | Msa0974370:intron | 30.0% |
| ! | TATCACATCGAAACATTTTC+TGG | + | chr6_4:7382719-7382738 | Msa0974370:intron | 30.0% |
| ! | AACATTTTCTGGATGCTATT+TGG | + | chr6_4:7382730-7382749 | Msa0974370:intron | 30.0% |
| TGCTTCTGCTTAATCATATT+TGG | + | chr6_4:7382762-7382781 | Msa0974370:intron | 30.0% | |
| ! | TAGTTTTCCATTTAGTGAGA+AGG | + | chr6_4:7382810-7382829 | Msa0974370:intron | 30.0% |
| TAACTAAATGGCAAGTTTGA+TGG | - | chr6_4:7382907-7382926 | None:intergenic | 30.0% | |
| TCTCTACTAATCCTCATATT+TGG | + | chr6_4:7383038-7383057 | Msa0974370:intron | 30.0% | |
| CTCTACTAATCCTCATATTT+GGG | + | chr6_4:7383039-7383058 | Msa0974370:intron | 30.0% | |
| TACATATATGCCCAAATATG+AGG | - | chr6_4:7383052-7383071 | None:intergenic | 30.0% | |
| GTTCAGGAATGCTTATAATA+TGG | + | chr6_4:7383099-7383118 | Msa0974370:intron | 30.0% | |
| !! | TATGGTGCTACATAAATTTG+GGG | + | chr6_4:7383117-7383136 | Msa0974370:CDS | 30.0% |
| ! | TAGTCTTAGTTTCGTTAGAA+TGG | - | chr6_4:7383384-7383403 | None:intergenic | 30.0% |
| ATTCTAACGAAACTAAGACT+AGG | + | chr6_4:7383383-7383402 | Msa0974370:CDS | 30.0% | |
| AATGGTGAAGTTATTAACAG+AGG | + | chr6_4:7383445-7383464 | Msa0974370:CDS | 30.0% | |
| GAACTTAATTAAGATGCTGA+CGG | + | chr6_4:7383477-7383496 | Msa0974370:CDS | 30.0% | |
| CATCAATGAGCATATTAACT+AGG | - | chr6_4:7383768-7383787 | None:intergenic | 30.0% | |
| TGATGACAAATATGATGACT+TGG | + | chr6_4:7383783-7383802 | Msa0974370:CDS | 30.0% | |
| !! | GAATGTATAACTTGTTTCGT+AGG | + | chr6_4:7383809-7383828 | Msa0974370:CDS | 30.0% |
| ! | TGTCATGACTTCTTTTATAC+GGG | + | chr6_4:7383861-7383880 | Msa0974370:CDS | 30.0% |
| TACTGGTAAGCAGTTAATTA+TGG | + | chr6_4:7383885-7383904 | Msa0974370:CDS | 30.0% | |
| AGTTAATTATGGATCCTGAA+AGG | + | chr6_4:7383896-7383915 | Msa0974370:CDS | 30.0% | |
| !! | ATTCTGAAATGACTTGTCAT+TGG | - | chr6_4:7384001-7384020 | None:intergenic | 30.0% |
| ACAAACAAAGAAATGAACTC+TGG | - | chr6_4:7384072-7384091 | None:intergenic | 30.0% | |
| ! | AGAGTTCATTTCTTTGTTTG+TGG | + | chr6_4:7384071-7384090 | Msa0974370:CDS | 30.0% |
| ACTTCTTATGATATGATGCA+GGG | + | chr6_4:7384351-7384370 | Msa0974370:CDS | 30.0% | |
| TTTAAAGGCTACATTTGGTA+AGG | + | chr6_4:7384581-7384600 | Msa0974370:CDS | 30.0% | |
| TTAAAGGCTACATTTGGTAA+GGG | + | chr6_4:7384582-7384601 | Msa0974370:CDS | 30.0% | |
| ! | AACATTTTTCCCTTTGACTA+AGG | - | chr6_4:7384751-7384770 | None:intergenic | 30.0% |
| TCAAAGGGAAAAATGTTCTT+CGG | + | chr6_4:7384754-7384773 | Msa0974370:CDS | 30.0% | |
| AAGCTCTTCAAGGTAAAAAT+AGG | + | chr6_4:7384843-7384862 | Msa0974370:CDS | 30.0% | |
| AGCTCTTCAAGGTAAAAATA+GGG | + | chr6_4:7384844-7384863 | Msa0974370:CDS | 30.0% | |
| ! | TGTCGAGTTTCTATATTTTC+TGG | - | chr6_4:7384897-7384916 | None:intergenic | 30.0% |
| !!! | ATCCGCTTTTTAATAACAAC+AGG | - | chr6_4:7385053-7385072 | None:intergenic | 30.0% |
| CAGAAACTAGGGTTTCATTT+GGG | - | chr6_4:7380720-7380739 | None:intergenic | 35.0% | |
| TCAGAAACTAGGGTTTCATT+TGG | - | chr6_4:7380721-7380740 | None:intergenic | 35.0% | |
| GAATGGGAATTTCAGAAACT+AGG | - | chr6_4:7380732-7380751 | None:intergenic | 35.0% | |
| AAATTCCCATTCACACTTCT+AGG | + | chr6_4:7380740-7380759 | Msa0974370:five_prime_UTR | 35.0% | |
| AATTCCCATTCACACTTCTA+GGG | + | chr6_4:7380741-7380760 | Msa0974370:five_prime_UTR | 35.0% | |
| ! | AAAACCCTAGAAGTGTGAAT+GGG | - | chr6_4:7380748-7380767 | None:intergenic | 35.0% |
| TCTTCATCGTTGGAGAATTT+GGG | - | chr6_4:7380794-7380813 | None:intergenic | 35.0% | |
| TTCTTCATCGTTGGAGAATT+TGG | - | chr6_4:7380795-7380814 | None:intergenic | 35.0% | |
| ATTGCTTTCTTCTTCATCGT+TGG | - | chr6_4:7380804-7380823 | None:intergenic | 35.0% | |
| !!! | CAAGTTTTTTCAGCGTAGTT+AGG | - | chr6_4:7380864-7380883 | None:intergenic | 35.0% |
| CTAACTACGCTGAAAAAACT+TGG | + | chr6_4:7380862-7380881 | Msa0974370:CDS | 35.0% | |
| ATTTACAATCGTAACGCTAG+TGG | + | chr6_4:7380912-7380931 | Msa0974370:CDS | 35.0% | |
| !! | TCAGCTTTGAAGAGCTTTAT+AGG | + | chr6_4:7380937-7380956 | Msa0974370:CDS | 35.0% |
| ! | CTTTGAAGAGCTTTATAGGT+TGG | + | chr6_4:7380941-7380960 | Msa0974370:intron | 35.0% |
| GTAAGATTGACGATGTTGTA+TGG | + | chr6_4:7381292-7381311 | Msa0974370:intron | 35.0% | |
| CGAAAATAAAATGAGCGTAG+AGG | + | chr6_4:7381345-7381364 | Msa0974370:intron | 35.0% | |
| ! | TCCACCATCTTTTCTGTTAT+GGG | - | chr6_4:7381443-7381462 | None:intergenic | 35.0% |
| ! | TTCCACCATCTTTTCTGTTA+TGG | - | chr6_4:7381444-7381463 | None:intergenic | 35.0% |
| !! | CAGAAAAGATGGTGGAAAAT+AGG | + | chr6_4:7381447-7381466 | Msa0974370:intron | 35.0% |
| GAATTGCATTTCAATCGTAG+TGG | + | chr6_4:7381599-7381618 | Msa0974370:intron | 35.0% | |
| ! | CATTTCAATCGTAGTGGAAT+TGG | + | chr6_4:7381605-7381624 | Msa0974370:intron | 35.0% |
| TGGATGATTATGTGTCTTGA+TGG | + | chr6_4:7381749-7381768 | Msa0974370:intron | 35.0% | |
| GGATGATTATGTGTCTTGAT+GGG | + | chr6_4:7381750-7381769 | Msa0974370:intron | 35.0% | |
| GTGGAATTTGAGGATTAAGT+AGG | + | chr6_4:7381848-7381867 | Msa0974370:intron | 35.0% | |
| CTCAATGTAATCACATCTGT+TGG | - | chr6_4:7381966-7381985 | None:intergenic | 35.0% | |
| TGTTCATGACTCAGATAGTA+TGG | - | chr6_4:7382063-7382082 | None:intergenic | 35.0% | |
| TATCTGAGTCATGAACATGA+AGG | + | chr6_4:7382066-7382085 | Msa0974370:intron | 35.0% | |
| ! | CATGAACATGAAGGTAGTTT+TGG | + | chr6_4:7382075-7382094 | Msa0974370:intron | 35.0% |
| TAACTGTGGTTGTGACAATT+TGG | + | chr6_4:7382248-7382267 | Msa0974370:intron | 35.0% | |
| AAGACATTTGCAAGTTACGT+TGG | + | chr6_4:7382421-7382440 | Msa0974370:intron | 35.0% | |
| AGACATTTGCAAGTTACGTT+GGG | + | chr6_4:7382422-7382441 | Msa0974370:intron | 35.0% | |
| ACAGAATAGGCACTAAAAAC+AGG | - | chr6_4:7382649-7382668 | None:intergenic | 35.0% | |
| ACCAACAACCAAAACAGAAT+AGG | - | chr6_4:7382662-7382681 | None:intergenic | 35.0% | |
| !!! | ATTCTGTTTTGGTTGTTGGT+TGG | + | chr6_4:7382662-7382681 | Msa0974370:intron | 35.0% |
| AGCTTTACCTTCTCACTAAA+TGG | - | chr6_4:7382820-7382839 | None:intergenic | 35.0% | |
| TTTGATGGAGGTTTATAGCA+TGG | - | chr6_4:7382892-7382911 | None:intergenic | 35.0% | |
| ! | TGCTCAAGGAGATATTTTCT+TGG | + | chr6_4:7383210-7383229 | Msa0974370:CDS | 35.0% |
| ! | TCAAGGAGATATTTTCTTGG+AGG | + | chr6_4:7383213-7383232 | Msa0974370:CDS | 35.0% |
| ! | TCATTTGCAATGCCTTGTTA+TGG | - | chr6_4:7383261-7383280 | None:intergenic | 35.0% |
| ! | ATGAACTCGGTTTGAATCTA+TGG | + | chr6_4:7383344-7383363 | Msa0974370:CDS | 35.0% |
| TTATTAACAGAGGCTTGATG+AGG | + | chr6_4:7383455-7383474 | Msa0974370:CDS | 35.0% | |
| !! | AATTAAGATGCTGACGGATT+TGG | + | chr6_4:7383483-7383502 | Msa0974370:CDS | 35.0% |
| !! | ATTAAGATGCTGACGGATTT+GGG | + | chr6_4:7383484-7383503 | Msa0974370:CDS | 35.0% |
| ATTATCTGAAGAAAGCTGAG+AGG | + | chr6_4:7383611-7383630 | Msa0974370:CDS | 35.0% | |
| ! | GAGGCGTTTAAATGAAGAAA+TGG | + | chr6_4:7383630-7383649 | Msa0974370:CDS | 35.0% |
| ! | ACTTCTTTTATACGGGATAC+TGG | + | chr6_4:7383868-7383887 | Msa0974370:CDS | 35.0% |
| ! | AAGAAATGAACTCTGGAGAT+CGG | - | chr6_4:7384065-7384084 | None:intergenic | 35.0% |
| AAACTTCGTAGAGGGATAAA+AGG | + | chr6_4:7384099-7384118 | Msa0974370:CDS | 35.0% | |
| AACTTCGTAGAGGGATAAAA+GGG | + | chr6_4:7384100-7384119 | Msa0974370:CDS | 35.0% | |
| ! | ACAAAGTCATGATGCTTTTC+CGG | + | chr6_4:7384154-7384173 | Msa0974370:CDS | 35.0% |
| CTTAAGCTCAAAACAGAATG+TGG | + | chr6_4:7384282-7384301 | Msa0974370:CDS | 35.0% | |
| ! | TCAATTCACTTCTAAGTTGG+AGG | + | chr6_4:7384308-7384327 | Msa0974370:CDS | 35.0% |
| ! | CAATTCACTTCTAAGTTGGA+GGG | + | chr6_4:7384309-7384328 | Msa0974370:CDS | 35.0% |
| GACTTCTTATGATATGATGC+AGG | + | chr6_4:7384350-7384369 | Msa0974370:CDS | 35.0% | |
| TCAGATGGAAGATTACATTG+CGG | - | chr6_4:7384468-7384487 | None:intergenic | 35.0% | |
| ! | GTAATCTTCCATCTGAAATC+CGG | + | chr6_4:7384472-7384491 | Msa0974370:CDS | 35.0% |
| ! | TAATCTTCCATCTGAAATCC+GGG | + | chr6_4:7384473-7384492 | Msa0974370:CDS | 35.0% |
| !! | TATGGGGAATGCTGATTTAA+AGG | + | chr6_4:7384566-7384585 | Msa0974370:CDS | 35.0% |
| ! | GCTGATTTAAAGGCTACATT+TGG | + | chr6_4:7384576-7384595 | Msa0974370:CDS | 35.0% |
| ! | AAAGCATTAGTACACACATC+TGG | - | chr6_4:7384638-7384657 | None:intergenic | 35.0% |
| ! | TGCTTTTCAACAATGCTGAT+CGG | + | chr6_4:7384652-7384671 | Msa0974370:CDS | 35.0% |
| TATAGAAACTCGACAAAGAG+TGG | + | chr6_4:7384902-7384921 | Msa0974370:CDS | 35.0% | |
| TTGTGAGGGTAATGAAATCT+AGG | + | chr6_4:7384958-7384977 | Msa0974370:CDS | 35.0% | |
| !! | GTTTTTAGAGAGGGATAAAG+TGG | + | chr6_4:7385094-7385113 | Msa0974370:CDS | 35.0% |
| TACTGTTTCAAGCAAGATAG+CGG | - | chr6_4:7385133-7385152 | None:intergenic | 35.0% | |
| !! | TCAACAAACTAGGCTTGTTA+GGG | + | chr6_4:7385283-7385302 | Msa0974370:three_prime_UTR | 35.0% |
| ! | TTGTAGAAGCTACTTTCACA+GGG | - | chr6_4:7385458-7385477 | None:intergenic | 35.0% |
| ! | ATTGTAGAAGCTACTTTCAC+AGG | - | chr6_4:7385459-7385478 | None:intergenic | 35.0% |
| CTAGGGTTTCATTTGGGAAA+TGG | - | chr6_4:7380714-7380733 | None:intergenic | 40.0% | |
| ! | GAAAACCCTAGAAGTGTGAA+TGG | - | chr6_4:7380749-7380768 | None:intergenic | 40.0% |
| CGTTGGAGAATTTGGGAAAA+CGG | - | chr6_4:7380787-7380806 | None:intergenic | 40.0% | |
| ! | TTATAAGCACCGTGTAGTTG+TGG | + | chr6_4:7380836-7380855 | Msa0974370:CDS | 40.0% |
| AGTTAGGATCCACAACTACA+CGG | - | chr6_4:7380848-7380867 | None:intergenic | 40.0% | |
| TGTTGTATGGAACAGAGTGT+TGG | + | chr6_4:7381305-7381324 | Msa0974370:intron | 40.0% | |
| ! | GTTGTATGGAACAGAGTGTT+GGG | + | chr6_4:7381306-7381325 | Msa0974370:intron | 40.0% |
| AGCACCCATAACAGAAAAGA+TGG | + | chr6_4:7381436-7381455 | Msa0974370:intron | 40.0% | |
| ACCCATAACAGAAAAGATGG+TGG | + | chr6_4:7381439-7381458 | Msa0974370:intron | 40.0% | |
| !! | AGATGGTGGAAAATAGGCTT+AGG | + | chr6_4:7381453-7381472 | Msa0974370:intron | 40.0% |
| ! | TTCAATCGTAGTGGAATTGG+AGG | + | chr6_4:7381608-7381627 | Msa0974370:intron | 40.0% |
| CTAAAACTTGCGGACAATTG+TGG | + | chr6_4:7382224-7382243 | Msa0974370:intron | 40.0% | |
| !!! | GCCTATTCTGTTTTGGTTGT+TGG | + | chr6_4:7382658-7382677 | Msa0974370:intron | 40.0% |
| TTGGCAAGTTTCATCTCGAT+AGG | + | chr6_4:7382681-7382700 | Msa0974370:intron | 40.0% | |
| AGTTTCATCTCGATAGGCAT+CGG | + | chr6_4:7382687-7382706 | Msa0974370:intron | 40.0% | |
| CTAAATGGCAAGTTTGATGG+AGG | - | chr6_4:7382904-7382923 | None:intergenic | 40.0% | |
| CGTGTTATAAAATAGGGCTG+TGG | + | chr6_4:7382960-7382979 | Msa0974370:intron | 40.0% | |
| TTTGGGGAGAAACTTTACTC+TGG | + | chr6_4:7383133-7383152 | Msa0974370:CDS | 40.0% | |
| TTGTCTCAGATGAGCAGTAA+CGG | - | chr6_4:7383170-7383189 | None:intergenic | 40.0% | |
| CAATCAATCAAAGCTGCTCA+AGG | + | chr6_4:7383196-7383215 | Msa0974370:CDS | 40.0% | |
| ! | TTTTCTTGGAGGAACTCAAC+AGG | + | chr6_4:7383224-7383243 | Msa0974370:CDS | 40.0% |
| CCATGTACATGAGTATGTCT+CGG | - | chr6_4:7383285-7383304 | None:intergenic | 40.0% | |
| ! | GTTCATGAACAGGGGTTTTA+CGG | - | chr6_4:7383330-7383349 | None:intergenic | 40.0% |
| AAAACCCCTGTTCATGAACT+CGG | + | chr6_4:7383331-7383350 | Msa0974370:CDS | 40.0% | |
| TCAAACCGAGTTCATGAACA+GGG | - | chr6_4:7383339-7383358 | None:intergenic | 40.0% | |
| TTCAAACCGAGTTCATGAAC+AGG | - | chr6_4:7383340-7383359 | None:intergenic | 40.0% | |
| TTGACCTTGTGCTTAAAGAG+AGG | + | chr6_4:7383422-7383441 | Msa0974370:CDS | 40.0% | |
| CATTCCTCTCTTTAAGCACA+AGG | - | chr6_4:7383429-7383448 | None:intergenic | 40.0% | |
| CTTGTGCTTAAAGAGAGGAA+TGG | + | chr6_4:7383427-7383446 | Msa0974370:CDS | 40.0% | |
| TGAGTCAGAGATAACTAGTG+TGG | + | chr6_4:7383684-7383703 | Msa0974370:CDS | 40.0% | |
| TATCCACACTCTCGTTCATA+TGG | + | chr6_4:7383732-7383751 | Msa0974370:CDS | 40.0% | |
| TTAATCATTGTGAGCCCAGA+AGG | - | chr6_4:7383838-7383857 | None:intergenic | 40.0% | |
| ACAGGATCTTTCAACCTTTC+AGG | - | chr6_4:7383913-7383932 | None:intergenic | 40.0% | |
| ! | AGAAATGAACTCTGGAGATC+GGG | - | chr6_4:7384064-7384083 | None:intergenic | 40.0% |
| TGGATGACAAACTTCGTAGA+GGG | + | chr6_4:7384091-7384110 | Msa0974370:CDS | 40.0% | |
| ACTTCGTAGAGGGATAAAAG+GGG | + | chr6_4:7384101-7384120 | Msa0974370:CDS | 40.0% | |
| ATAAGCAACACCTAGCAAAG+AGG | + | chr6_4:7384211-7384230 | Msa0974370:CDS | 40.0% | |
| ! | AATCTTCCATCTGAAATCCG+GGG | + | chr6_4:7384474-7384493 | Msa0974370:CDS | 40.0% |
| ATTGACGTGGCAAGCTAATA+TGG | + | chr6_4:7384548-7384567 | Msa0974370:CDS | 40.0% | |
| TTGACGTGGCAAGCTAATAT+GGG | + | chr6_4:7384549-7384568 | Msa0974370:CDS | 40.0% | |
| AAACATTCAGCTCATGCTTC+TGG | - | chr6_4:7384608-7384627 | None:intergenic | 40.0% | |
| TACCTATGTCAGACTTGAAG+AGG | + | chr6_4:7384709-7384728 | Msa0974370:CDS | 40.0% | |
| TCAGATATGTCCTTGCTCAT+TGG | - | chr6_4:7384786-7384805 | None:intergenic | 40.0% | |
| ATTCACTAGCAAGCTCTTCA+AGG | + | chr6_4:7384833-7384852 | Msa0974370:CDS | 40.0% | |
| TGAGGGTAATGAAATCTAGG+CGG | + | chr6_4:7384961-7384980 | Msa0974370:CDS | 40.0% | |
| ACATAATAATGTCATCGCCG+AGG | + | chr6_4:7384992-7385011 | Msa0974370:CDS | 40.0% | |
| TAAAAACTCGCGCTCAATGA+GGG | - | chr6_4:7385081-7385100 | None:intergenic | 40.0% | |
| TTGCGCATAGTCAACAAACT+AGG | + | chr6_4:7385273-7385292 | Msa0974370:three_prime_UTR | 40.0% | |
| ! | GTCAACAAACTAGGCTTGTT+AGG | + | chr6_4:7385282-7385301 | Msa0974370:three_prime_UTR | 40.0% |
| TTGTTAGGGTCACTTCTGTT+TGG | + | chr6_4:7385297-7385316 | Msa0974370:three_prime_UTR | 40.0% | |
| AAATGAGCGTAGAGGAGATG+AGG | + | chr6_4:7381353-7381372 | Msa0974370:intron | 45.0% | |
| TGGTGGAAAATAGGCTTAGG+TGG | + | chr6_4:7381456-7381475 | Msa0974370:intron | 45.0% | |
| TGGAAAATAGGCTTAGGTGG+TGG | + | chr6_4:7381459-7381478 | Msa0974370:intron | 45.0% | |
| CAGACAAACACGCATTCGAT+CGG | - | chr6_4:7381939-7381958 | None:intergenic | 45.0% | |
| TACGACATACACTGGCACAT+GGG | - | chr6_4:7382018-7382037 | None:intergenic | 45.0% | |
| ATACGACATACACTGGCACA+TGG | - | chr6_4:7382019-7382038 | None:intergenic | 45.0% | |
| ACATGGGATACGACATACAC+TGG | - | chr6_4:7382026-7382045 | None:intergenic | 45.0% | |
| TATCCCATGTTCGTGTATCG+TGG | + | chr6_4:7382036-7382055 | Msa0974370:intron | 45.0% | |
| !!! | TGAAGGTAGTTTTGGTGCAG+TGG | + | chr6_4:7382083-7382102 | Msa0974370:intron | 45.0% |
| GCTCTCACAATGGAAGACTT+AGG | - | chr6_4:7382162-7382181 | None:intergenic | 45.0% | |
| TGCATGAGCAAGCAACAATC+CGG | - | chr6_4:7382346-7382365 | None:intergenic | 45.0% | |
| AAGTTACGTTGGGCTGTTTG+AGG | + | chr6_4:7382432-7382451 | Msa0974370:intron | 45.0% | |
| GAAGTGGGTAGACCATAACA+AGG | + | chr6_4:7383246-7383265 | Msa0974370:CDS | 45.0% | |
| CCGAGACATACTCATGTACA+TGG | + | chr6_4:7383282-7383301 | Msa0974370:CDS | 45.0% | |
| CAAACCGAGTTCATGAACAG+GGG | - | chr6_4:7383338-7383357 | None:intergenic | 45.0% | |
| AAGGCTTCTCAAAGTCAGTC+TGG | - | chr6_4:7383522-7383541 | None:intergenic | 45.0% | |
| !! | GGAGAGAGTATCTCACTACT+TGG | + | chr6_4:7383651-7383670 | Msa0974370:CDS | 45.0% |
| GTCAGAGATAACTAGTGTGG+TGG | + | chr6_4:7383687-7383706 | Msa0974370:CDS | 45.0% | |
| TCTCCATATGAACGAGAGTG+TGG | - | chr6_4:7383738-7383757 | None:intergenic | 45.0% | |
| CTCGTTCATATGGAGAACTC+AGG | + | chr6_4:7383742-7383761 | Msa0974370:CDS | 45.0% | |
| ! | TTGTTTCGTAGGGTACCTTC+TGG | + | chr6_4:7383820-7383839 | Msa0974370:CDS | 45.0% |
| ! | TGTTTCGTAGGGTACCTTCT+GGG | + | chr6_4:7383821-7383840 | Msa0974370:CDS | 45.0% |
| ! | CGATTTTGTGCAGCGTCTTT+TGG | + | chr6_4:7383933-7383952 | Msa0974370:CDS | 45.0% |
| ! | GCAGCGTCTTTTGGATTTGA+AGG | + | chr6_4:7383942-7383961 | Msa0974370:CDS | 45.0% |
| GTGGATGACAAACTTCGTAG+AGG | + | chr6_4:7384090-7384109 | Msa0974370:CDS | 45.0% | |
| CAAACACATCCTTCTCTTGC+AGG | - | chr6_4:7384182-7384201 | None:intergenic | 45.0% | |
| CCTAGCAAAGAGGCTTCTTT+CGG | + | chr6_4:7384221-7384240 | Msa0974370:CDS | 45.0% | |
| CTAGCAAAGAGGCTTCTTTC+GGG | + | chr6_4:7384222-7384241 | Msa0974370:CDS | 45.0% | |
| TAGCAAAGAGGCTTCTTTCG+GGG | + | chr6_4:7384223-7384242 | Msa0974370:CDS | 45.0% | |
| ATGAACCTGTTGTAAGCACC+TGG | - | chr6_4:7384428-7384447 | None:intergenic | 45.0% | |
| AGGTGCTTACAACAGGTTCA+TGG | + | chr6_4:7384427-7384446 | Msa0974370:CDS | 45.0% | |
| GGAAGATTACATTGCGGACT+AGG | - | chr6_4:7384462-7384481 | None:intergenic | 45.0% | |
| GAAACTTCTCACATAGACCC+CGG | - | chr6_4:7384494-7384513 | None:intergenic | 45.0% | |
| TGACGTGGCAAGCTAATATG+GGG | + | chr6_4:7384550-7384569 | Msa0974370:CDS | 45.0% | |
| ! | TGCTGATCGGATGACTTGTA+AGG | + | chr6_4:7384665-7384684 | Msa0974370:CDS | 45.0% |
| GACTTGTAAGGAGATAGAGC+AGG | + | chr6_4:7384677-7384696 | Msa0974370:CDS | 45.0% | |
| CACCTCTTCAAGTCTGACAT+AGG | - | chr6_4:7384714-7384733 | None:intergenic | 45.0% | |
| !! | AGTCGTTGGCCTTAGTCAAA+GGG | + | chr6_4:7384739-7384758 | Msa0974370:CDS | 45.0% |
| TAGGGACTGTTGTTGCACAA+AGG | + | chr6_4:7384862-7384881 | Msa0974370:CDS | 45.0% | |
| AGGGACTGTTGTTGCACAAA+GGG | + | chr6_4:7384863-7384882 | Msa0974370:CDS | 45.0% | |
| AGAAACTCGACAAAGAGTGG+AGG | + | chr6_4:7384905-7384924 | Msa0974370:CDS | 45.0% | |
| GAGGGTAATGAAATCTAGGC+GGG | + | chr6_4:7384962-7384981 | Msa0974370:CDS | 45.0% | |
| CTAAAAACTCGCGCTCAATG+AGG | - | chr6_4:7385082-7385101 | None:intergenic | 45.0% | |
| !! | TTGAGCGCGAGTTTTTAGAG+AGG | + | chr6_4:7385084-7385103 | Msa0974370:CDS | 45.0% |
| !! | TGAGCGCGAGTTTTTAGAGA+GGG | + | chr6_4:7385085-7385104 | Msa0974370:CDS | 45.0% |
| !!! | CTAATTTTTTTTTATTTAAA+CGG | - | chr6_4:7381684-7381703 | None:intergenic | 5.0% |
| !! | GTATGGAACAGAGTGTTGGG+TGG | + | chr6_4:7381309-7381328 | Msa0974370:intron | 50.0% |
| AGGAGATGAGGATGTTGCGT+TGG | + | chr6_4:7381365-7381384 | Msa0974370:intron | 50.0% | |
| GATGCGTGGTTAGGCTAGAT+TGG | + | chr6_4:7381387-7381406 | Msa0974370:intron | 50.0% | |
| CGATCGAATGCGTGTTTGTC+TGG | + | chr6_4:7381937-7381956 | Msa0974370:intron | 50.0% | |
| GGACCACGATACACGAACAT+GGG | - | chr6_4:7382042-7382061 | None:intergenic | 50.0% | |
| TGGACCACGATACACGAACA+TGG | - | chr6_4:7382043-7382062 | None:intergenic | 50.0% | |
| !!! | GGTAGTTTTGGTGCAGTGGA+TGG | + | chr6_4:7382087-7382106 | Msa0974370:intron | 50.0% |
| ! | GTTGCTGTTGTGTGACTTCG+AGG | + | chr6_4:7382111-7382130 | Msa0974370:intron | 50.0% |
| TTGTGTGACTTCGAGGTCGT+TGG | + | chr6_4:7382118-7382137 | Msa0974370:intron | 50.0% | |
| CGGACAATTGTGGCTAACTG+TGG | + | chr6_4:7382234-7382253 | Msa0974370:intron | 50.0% | |
| CCATGCTTTACGGATCACAC+CGG | + | chr6_4:7382324-7382343 | Msa0974370:intron | 50.0% | |
| !! | TTCATCTCGATAGGCATCGG+TGG | + | chr6_4:7382690-7382709 | Msa0974370:intron | 50.0% |
| TGGAGGAACTCAACAGGAAG+TGG | + | chr6_4:7383230-7383249 | Msa0974370:CDS | 50.0% | |
| GGAGGAACTCAACAGGAAGT+GGG | + | chr6_4:7383231-7383250 | Msa0974370:CDS | 50.0% | |
| ! | ACAGGGGTTTTACGGTTGCT+TGG | - | chr6_4:7383322-7383341 | None:intergenic | 50.0% |
| AGACGCTGCACAAAATCGAC+AGG | - | chr6_4:7383931-7383950 | None:intergenic | 50.0% | |
| CGTAGAGGGATAAAAGGGGT+TGG | + | chr6_4:7384105-7384124 | Msa0974370:CDS | 50.0% | |
| !! | AGGGATAAAAGGGGTTGGTG+AGG | + | chr6_4:7384110-7384129 | Msa0974370:CDS | 50.0% |
| !! | GATAAAAGGGGTTGGTGAGG+AGG | + | chr6_4:7384113-7384132 | Msa0974370:CDS | 50.0% |
| TTTCCGGTACCTGCAAGAGA+AGG | + | chr6_4:7384170-7384189 | Msa0974370:CDS | 50.0% | |
| CATCCTTCTCTTGCAGGTAC+CGG | - | chr6_4:7384176-7384195 | None:intergenic | 50.0% | |
| CCGAAAGAAGCCTCTTTGCT+AGG | - | chr6_4:7384224-7384243 | None:intergenic | 50.0% | |
| GGGGAAGACTGTATCAGATG+AGG | + | chr6_4:7384242-7384261 | Msa0974370:CDS | 50.0% | |
| CAGGGTTTCTTAGCAGCTCA+TGG | + | chr6_4:7384369-7384388 | Msa0974370:CDS | 50.0% | |
| TAGCCCTACACTATCTGTCC+AGG | + | chr6_4:7384407-7384426 | Msa0974370:CDS | 50.0% | |
| GCACCTGGACAGATAGTGTA+GGG | - | chr6_4:7384413-7384432 | None:intergenic | 50.0% | |
| AGCACCTGGACAGATAGTGT+AGG | - | chr6_4:7384414-7384433 | None:intergenic | 50.0% | |
| TCTGTCCAGGTGCTTACAAC+AGG | + | chr6_4:7384420-7384439 | Msa0974370:CDS | 50.0% | |
| !! | CATTGCGGACTAGGTTGAGT+TGG | - | chr6_4:7384453-7384472 | None:intergenic | 50.0% |
| CATAGACCCCGGATTTCAGA+TGG | - | chr6_4:7384483-7384502 | None:intergenic | 50.0% | |
| TATTATCTCGGCGCTCACAG+TGG | + | chr6_4:7384519-7384538 | Msa0974370:CDS | 50.0% | |
| ACAGTGGTAGGAGATTGACG+TGG | + | chr6_4:7384535-7384554 | Msa0974370:CDS | 50.0% | |
| TGACTAAGGCCAACGACTGA+AGG | - | chr6_4:7384737-7384756 | None:intergenic | 50.0% | |
| !! | CAGTCGTTGGCCTTAGTCAA+AGG | + | chr6_4:7384738-7384757 | Msa0974370:CDS | 50.0% |
| TCGGAAAGAGCCAATGAGCA+AGG | + | chr6_4:7384773-7384792 | Msa0974370:CDS | 50.0% | |
| AGACAGAAAGCCGCAGATTG+AGG | + | chr6_4:7384929-7384948 | Msa0974370:CDS | 50.0% | |
| ACAACTGCTGCCTCAATCTG+CGG | - | chr6_4:7384942-7384961 | None:intergenic | 50.0% | |
| AGATTGAGGCAGCAGTTGTG+AGG | + | chr6_4:7384943-7384962 | Msa0974370:CDS | 50.0% | |
| GATTGAGGCAGCAGTTGTGA+GGG | + | chr6_4:7384944-7384963 | Msa0974370:CDS | 50.0% | |
| AGGATGTTGCGTTGGATGCG+TGG | + | chr6_4:7381373-7381392 | Msa0974370:intron | 55.0% | |
| GTTGCGTTGGATGCGTGGTT+AGG | + | chr6_4:7381378-7381397 | Msa0974370:intron | 55.0% | |
| CCGGTGTGATCCGTAAAGCA+TGG | - | chr6_4:7382327-7382346 | None:intergenic | 55.0% | |
| ! | AGCAGCTCATGGTGCTGAGT+TGG | + | chr6_4:7384380-7384399 | Msa0974370:CDS | 55.0% |
| ! | GCAGCTCATGGTGCTGAGTT+GGG | + | chr6_4:7384381-7384400 | Msa0974370:CDS | 55.0% |
| !! | GAAGAGGTGCCTTCAGTCGT+TGG | + | chr6_4:7384725-7384744 | Msa0974370:CDS | 55.0% |
| ATCTCGGCGCTCACAGTGGT+AGG | + | chr6_4:7384523-7384542 | Msa0974370:CDS | 60.0% | |
| CTGCAGCTGCTTCGTGACCT+CGG | - | chr6_4:7385012-7385031 | None:intergenic | 60.0% | |
| CGAGGTCACGAAGCAGCTGC+AGG | + | chr6_4:7385010-7385029 | Msa0974370:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 7380685 | 7385479 | 7380685 | ID=Msa0974370;Name=Msa0974370 |
| chr6_4 | mRNA | 7380685 | 7385479 | 7380685 | ID=Msa0974370-mRNA-1;Parent=Msa0974370;Name=Msa0974370-mRNA-1;_AED=0.01;_eAED=0.01;_QI=122|1|1|1|1|1|2|334|730 |
| chr6_4 | exon | 7380685 | 7380958 | 7380685 | ID=Msa0974370-mRNA-1:exon:2859;Parent=Msa0974370-mRNA-1 |
| chr6_4 | exon | 7383105 | 7385479 | 7383105 | ID=Msa0974370-mRNA-1:exon:2860;Parent=Msa0974370-mRNA-1 |
| chr6_4 | five_prime_UTR | 7380685 | 7380806 | 7380685 | ID=Msa0974370-mRNA-1:five_prime_utr;Parent=Msa0974370-mRNA-1 |
| chr6_4 | CDS | 7380807 | 7380958 | 7380807 | ID=Msa0974370-mRNA-1:cds;Parent=Msa0974370-mRNA-1 |
| chr6_4 | CDS | 7383105 | 7385145 | 7383105 | ID=Msa0974370-mRNA-1:cds;Parent=Msa0974370-mRNA-1 |
| chr6_4 | three_prime_UTR | 7385146 | 7385479 | 7385146 | ID=Msa0974370-mRNA-1:three_prime_utr;Parent=Msa0974370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
