Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0937050 | XP_024641713.2 | 97.534 | 730 | 18 | 0 | 1 | 730 | 1 | 730 | 0.0 | 1484 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0937050 | sp|Q9ZVH4|CUL3A_ARATH | 75.583 | 729 | 177 | 1 | 2 | 730 | 5 | 732 | 0.0 | 1179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0937050 | A0A396HFG7 | 97.534 | 730 | 18 | 0 | 1 | 730 | 1 | 730 | 0.0 | 1484 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002560 | Msa0937050 | 0.836480 | 9.131905e-57 | -8.615850e-47 |
| Msa0005270 | Msa0937050 | 0.806205 | 9.208709e-50 | -8.615850e-47 |
| Msa0010770 | Msa0937050 | 0.835598 | 1.528670e-56 | -8.615850e-47 |
| Msa0015120 | Msa0937050 | 0.808083 | 3.687069e-50 | -8.615850e-47 |
| Msa0023330 | Msa0937050 | 0.846306 | 2.359686e-59 | -8.615850e-47 |
| Msa0031180 | Msa0937050 | 0.853209 | 2.779639e-61 | -8.615850e-47 |
| Msa0034350 | Msa0937050 | 0.801189 | 1.012682e-48 | -8.615850e-47 |
| Msa0037120 | Msa0937050 | 0.845422 | 4.102342e-59 | -8.615850e-47 |
| Msa0043500 | Msa0937050 | 0.806358 | 8.549519e-50 | -8.615850e-47 |
| Msa0045340 | Msa0937050 | 0.829830 | 4.132824e-55 | -8.615850e-47 |
| Msa0053760 | Msa0937050 | 0.813633 | 2.318749e-51 | -8.615850e-47 |
| Msa0054820 | Msa0937050 | 0.847757 | 9.449669e-60 | -8.615850e-47 |
| Msa0059890 | Msa0937050 | 0.813068 | 3.085662e-51 | -8.615850e-47 |
| Msa0064290 | Msa0937050 | 0.804823 | 1.795157e-49 | -8.615850e-47 |
| Msa0078480 | Msa0937050 | 0.852976 | 3.241128e-61 | -8.615850e-47 |
| Msa0084340 | Msa0937050 | 0.828135 | 1.064013e-54 | -8.615850e-47 |
| Msa0085370 | Msa0937050 | 0.807575 | 4.727030e-50 | -8.615850e-47 |
| Msa0096580 | Msa0937050 | 0.838516 | 2.745132e-57 | -8.615850e-47 |
| Msa0097950 | Msa0937050 | 0.821543 | 3.819288e-53 | -8.615850e-47 |
| Msa0099620 | Msa0937050 | 0.812491 | 4.128381e-51 | -8.615850e-47 |
| Msa0099650 | Msa0937050 | 0.820869 | 5.461545e-53 | -8.615850e-47 |
| Msa0100160 | Msa0937050 | 0.840853 | 6.772107e-58 | -8.615850e-47 |
| Msa0115560 | Msa0937050 | 0.805762 | 1.141704e-49 | -8.615850e-47 |
| Msa0116080 | Msa0937050 | 0.829549 | 4.837891e-55 | -8.615850e-47 |
| Msa0610670 | Msa0937050 | 0.817647 | 2.958653e-52 | -8.615850e-47 |
| Msa0613090 | Msa0937050 | 0.803511 | 3.366835e-49 | -8.615850e-47 |
| Msa0623990 | Msa0937050 | 0.801020 | 1.096578e-48 | -8.615850e-47 |
| Msa0624060 | Msa0937050 | 0.828424 | 9.059375e-55 | -8.615850e-47 |
| Msa0629430 | Msa0937050 | 0.811042 | 8.530420e-51 | -8.615850e-47 |
| Msa0652690 | Msa0937050 | 0.820286 | 7.433924e-53 | -8.615850e-47 |
| Msa0667050 | Msa0937050 | 0.805889 | 1.073556e-49 | -8.615850e-47 |
| Msa0667790 | Msa0937050 | 0.800351 | 1.501303e-48 | -8.615850e-47 |
| Msa0676130 | Msa0937050 | 0.812283 | 4.583220e-51 | -8.615850e-47 |
| Msa0676180 | Msa0937050 | 0.818579 | 1.821043e-52 | -8.615850e-47 |
| Msa0686080 | Msa0937050 | 0.808253 | 3.392046e-50 | -8.615850e-47 |
| Msa0712560 | Msa0937050 | 0.815590 | 8.550327e-52 | -8.615850e-47 |
| Msa0715470 | Msa0937050 | 0.800086 | 1.699893e-48 | -8.615850e-47 |
| Msa0717890 | Msa0937050 | 0.808754 | 2.651368e-50 | -8.615850e-47 |
| Msa0721280 | Msa0937050 | 0.800963 | 1.126168e-48 | -8.615850e-47 |
| Msa0752700 | Msa0937050 | 0.807792 | 4.251802e-50 | -8.615850e-47 |
| Msa0756110 | Msa0937050 | 0.829611 | 4.673575e-55 | -8.615850e-47 |
| Msa0756540 | Msa0937050 | 0.838191 | 3.329168e-57 | -8.615850e-47 |
| Msa0796440 | Msa0937050 | 0.819816 | 9.522250e-53 | -8.615850e-47 |
| Msa0800700 | Msa0937050 | 0.828583 | 8.294261e-55 | -8.615850e-47 |
| Msa0805430 | Msa0937050 | 0.816931 | 4.287484e-52 | -8.615850e-47 |
| Msa0820200 | Msa0937050 | 0.802065 | 6.694899e-49 | -8.615850e-47 |
| Msa0828680 | Msa0937050 | 0.808778 | 2.620320e-50 | -8.615850e-47 |
| Msa0126190 | Msa0937050 | 0.811828 | 5.758161e-51 | -8.615850e-47 |
| Msa0131290 | Msa0937050 | 0.840188 | 1.010956e-57 | -8.615850e-47 |
| Msa0143850 | Msa0937050 | 0.825425 | 4.719758e-54 | -8.615850e-47 |
| Msa0151180 | Msa0937050 | 0.802187 | 6.318362e-49 | -8.615850e-47 |
| Msa0156230 | Msa0937050 | 0.806371 | 8.497417e-50 | -8.615850e-47 |
| Msa0177170 | Msa0937050 | 0.820653 | 6.121057e-53 | -8.615850e-47 |
| Msa0183050 | Msa0937050 | 0.826613 | 2.464169e-54 | -8.615850e-47 |
| Msa0183420 | Msa0937050 | 0.819192 | 1.321132e-52 | -8.615850e-47 |
| Msa0198700 | Msa0937050 | 0.805414 | 1.350487e-49 | -8.615850e-47 |
| Msa0218350 | Msa0937050 | 0.831842 | 1.326973e-55 | -8.615850e-47 |
| Msa0227230 | Msa0937050 | 0.805740 | 1.153588e-49 | -8.615850e-47 |
| Msa0230680 | Msa0937050 | 0.826208 | 3.078147e-54 | -8.615850e-47 |
| Msa0237200 | Msa0937050 | 0.872504 | 3.023170e-67 | -8.615850e-47 |
| Msa0376020 | Msa0937050 | 0.840186 | 1.011721e-57 | -8.615850e-47 |
| Msa0378970 | Msa0937050 | 0.825844 | 3.756584e-54 | -8.615850e-47 |
| Msa0381000 | Msa0937050 | 0.803227 | 3.854124e-49 | -8.615850e-47 |
| Msa0381080 | Msa0937050 | 0.809666 | 1.690553e-50 | -8.615850e-47 |
| Msa0387050 | Msa0937050 | 0.808354 | 3.227511e-50 | -8.615850e-47 |
| Msa0389910 | Msa0937050 | 0.827827 | 1.261551e-54 | -8.615850e-47 |
| Msa0417650 | Msa0937050 | 0.808170 | 3.532803e-50 | -8.615850e-47 |
| Msa0428050 | Msa0937050 | 0.801184 | 1.015098e-48 | -8.615850e-47 |
| Msa0430870 | Msa0937050 | 0.806381 | 8.455961e-50 | -8.615850e-47 |
| Msa0473330 | Msa0937050 | 0.803811 | 2.917540e-49 | -8.615850e-47 |
| Msa0474940 | Msa0937050 | 0.817682 | 2.904964e-52 | -8.615850e-47 |
| Msa0480780 | Msa0937050 | 0.821574 | 3.755847e-53 | -8.615850e-47 |
| Msa0240300 | Msa0937050 | 0.846278 | 2.401795e-59 | -8.615850e-47 |
| Msa0243250 | Msa0937050 | 0.809524 | 1.813853e-50 | -8.615850e-47 |
| Msa0245940 | Msa0937050 | 0.803438 | 3.486290e-49 | -8.615850e-47 |
| Msa0259240 | Msa0937050 | 0.805046 | 1.612511e-49 | -8.615850e-47 |
| Msa0274970 | Msa0937050 | 0.869705 | 2.533621e-66 | -8.615850e-47 |
| Msa0280110 | Msa0937050 | 0.804425 | 2.173444e-49 | -8.615850e-47 |
| Msa0290760 | Msa0937050 | 0.809273 | 2.052963e-50 | -8.615850e-47 |
| Msa0308440 | Msa0937050 | 0.823403 | 1.411647e-53 | -8.615850e-47 |
| Msa0308560 | Msa0937050 | 0.818463 | 1.934596e-52 | -8.615850e-47 |
| Msa0315680 | Msa0937050 | 0.871635 | 5.881492e-67 | -8.615850e-47 |
| Msa0320800 | Msa0937050 | 0.809542 | 1.796988e-50 | -8.615850e-47 |
| Msa0324240 | Msa0937050 | 0.846883 | 1.641872e-59 | -8.615850e-47 |
| Msa0326520 | Msa0937050 | 0.802182 | 6.333084e-49 | -8.615850e-47 |
| Msa0336050 | Msa0937050 | 0.828259 | 9.928822e-55 | -8.615850e-47 |
| Msa0336290 | Msa0937050 | 0.800773 | 1.231567e-48 | -8.615850e-47 |
| Msa0342010 | Msa0937050 | 0.803720 | 3.046842e-49 | -8.615850e-47 |
| Msa0346910 | Msa0937050 | 0.830932 | 2.222924e-55 | -8.615850e-47 |
| Msa0347950 | Msa0937050 | 0.805591 | 1.239508e-49 | -8.615850e-47 |
| Msa0484780 | Msa0937050 | 0.812993 | 3.205734e-51 | -8.615850e-47 |
| Msa0486130 | Msa0937050 | 0.820117 | 8.126083e-53 | -8.615850e-47 |
| Msa0506830 | Msa0937050 | 0.806797 | 6.907721e-50 | -8.615850e-47 |
| Msa0512870 | Msa0937050 | 0.803277 | 3.764771e-49 | -8.615850e-47 |
| Msa0516020 | Msa0937050 | 0.840922 | 6.494593e-58 | -8.615850e-47 |
| Msa0523050 | Msa0937050 | 0.853059 | 3.068393e-61 | -8.615850e-47 |
| Msa0557320 | Msa0937050 | 0.832291 | 1.028113e-55 | -8.615850e-47 |
| Msa0558230 | Msa0937050 | 0.800462 | 1.425261e-48 | -8.615850e-47 |
| Msa0564130 | Msa0937050 | 0.823279 | 1.508564e-53 | -8.615850e-47 |
| Msa0571130 | Msa0937050 | 0.829225 | 5.797855e-55 | -8.615850e-47 |
| Msa0571780 | Msa0937050 | 0.821361 | 4.205571e-53 | -8.615850e-47 |
| Msa0574390 | Msa0937050 | 0.818526 | 1.872041e-52 | -8.615850e-47 |
| Msa0575470 | Msa0937050 | 0.800171 | 1.633505e-48 | -8.615850e-47 |
| Msa0576680 | Msa0937050 | 0.837002 | 6.718595e-57 | -8.615850e-47 |
| Msa0579200 | Msa0937050 | 0.810458 | 1.141233e-50 | -8.615850e-47 |
| Msa0866400 | Msa0937050 | 0.801328 | 9.482447e-49 | -8.615850e-47 |
| Msa0906690 | Msa0937050 | 0.822090 | 2.852333e-53 | -8.615850e-47 |
| Msa0909770 | Msa0937050 | 0.803628 | 3.183681e-49 | -8.615850e-47 |
| Msa0933230 | Msa0937050 | 0.803836 | 2.882637e-49 | -8.615850e-47 |
| Msa0937050 | Msa0939000 | 0.826748 | 2.288276e-54 | -8.615850e-47 |
| Msa0937050 | Msa0945240 | 0.824033 | 1.004701e-53 | -8.615850e-47 |
| Msa0937050 | Msa0958030 | 0.801408 | 9.134128e-49 | -8.615850e-47 |
| Msa0937050 | Msa0972070 | 0.815795 | 7.696994e-52 | -8.615850e-47 |
| Msa0937050 | Msa0974370 | 0.839211 | 1.814276e-57 | -8.615850e-47 |
| Msa0937050 | Msa0975940 | 0.816410 | 5.609729e-52 | -8.615850e-47 |
| Msa0937050 | Msa0990580 | 0.824080 | 9.795416e-54 | -8.615850e-47 |
| Msa0937050 | Msa1008750 | 0.805848 | 1.094701e-49 | -8.615850e-47 |
| Msa0937050 | Msa1077070 | 0.803916 | 2.773595e-49 | -8.615850e-47 |
| Msa0937050 | Msa1080270 | 0.815186 | 1.051725e-51 | -8.615850e-47 |
| Msa0937050 | Msa1088410 | 0.836239 | 1.051572e-56 | -8.615850e-47 |
| Msa0937050 | Msa1096060 | 0.811787 | 5.879367e-51 | -8.615850e-47 |
| Msa0937050 | Msa1098400 | 0.800120 | 1.672987e-48 | -8.615850e-47 |
| Msa0937050 | Msa1098420 | 0.801882 | 7.298924e-49 | -8.615850e-47 |
| Msa0937050 | Msa1098890 | 0.804287 | 2.322087e-49 | -8.615850e-47 |
| Msa0937050 | Msa1118110 | 0.805061 | 1.600815e-49 | -8.615850e-47 |
| Msa0937050 | Msa1130530 | 0.824430 | 8.104653e-54 | -8.615850e-47 |
| Msa0937050 | Msa1133400 | 0.813864 | 2.062991e-51 | -8.615850e-47 |
| Msa0937050 | Msa1174850 | 0.833128 | 6.370130e-56 | -8.615850e-47 |
| Msa0937050 | Msa1176270 | 0.811568 | 6.558767e-51 | -8.615850e-47 |
| Msa0937050 | Msa1205370 | 0.813145 | 2.968788e-51 | -8.615850e-47 |
| Msa0937050 | Msa1224480 | 0.800846 | 1.189996e-48 | -8.615850e-47 |
| Msa0937050 | Msa1250290 | 0.804610 | 1.988567e-49 | -8.615850e-47 |
| Msa0937050 | Msa1255370 | 0.805248 | 1.463277e-49 | -8.615850e-47 |
| Msa0937050 | Msa1259640 | 0.805709 | 1.171285e-49 | -8.615850e-47 |
| Msa0937050 | Msa1295910 | 0.819228 | 1.296930e-52 | -8.615850e-47 |
| Msa0937050 | Msa1320820 | 0.823987 | 1.030111e-53 | -8.615850e-47 |
| Msa0937050 | Msa1328640 | 0.802124 | 6.509848e-49 | -8.615850e-47 |
| Msa0937050 | Msa1333730 | 0.812260 | 4.635740e-51 | -8.615850e-47 |
| Msa0937050 | Msa1341490 | 0.816973 | 4.194964e-52 | -8.615850e-47 |
| Msa0937050 | Msa1349520 | 0.810894 | 9.186665e-51 | -8.615850e-47 |
| Msa0937050 | Msa1358240 | 0.803163 | 3.973915e-49 | -8.615850e-47 |
| Msa0937050 | Msa1359560 | 0.830316 | 3.145662e-55 | -8.615850e-47 |
| Msa0937050 | Msa1378410 | 0.824821 | 6.557963e-54 | -8.615850e-47 |
| Msa0937050 | Msa1383230 | 0.800605 | 1.332630e-48 | -8.615850e-47 |
| Msa0937050 | Msa1383740 | 0.843190 | 1.631737e-58 | -8.615850e-47 |
| Msa0937050 | Msa1392700 | 0.835749 | 1.399998e-56 | -8.615850e-47 |
| Msa0937050 | Msa1426570 | 0.821010 | 5.068170e-53 | -8.615850e-47 |
| Msa0937050 | Msa1437330 | 0.825560 | 4.385319e-54 | -8.615850e-47 |
| Msa0937050 | Msa1438520 | 0.833096 | 6.490798e-56 | -8.615850e-47 |
| Msa0937050 | Msa1448490 | 0.836548 | 8.774961e-57 | -8.615850e-47 |
| Msa0937050 | Msa1450720 | 0.817506 | 3.183391e-52 | -8.615850e-47 |
| Msa0937050 | Msa1452480 | 0.800384 | 1.478428e-48 | -8.615850e-47 |
| Msa0937050 | Msa1464630 | 0.803616 | 3.201898e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0937050 | MtrunA17_Chr6g0453061 | 97.534 | 730 | 18 | 0 | 1 | 730 | 1 | 730 | 0.0 | 1484 |
| Msa0937050 | MtrunA17_Chr6g0453081 | 86.986 | 730 | 95 | 0 | 1 | 730 | 1 | 730 | 0.0 | 1308 |
| Msa0937050 | MtrunA17_Chr8g0361901 | 77.915 | 729 | 160 | 1 | 2 | 730 | 4 | 731 | 0.0 | 1197 |
| Msa0937050 | MtrunA17_Chr5g0416711 | 71.193 | 729 | 209 | 1 | 2 | 730 | 5 | 732 | 0.0 | 1108 |
| Msa0937050 | MtrunA17_Chr1g0166181 | 67.720 | 728 | 228 | 4 | 6 | 730 | 16 | 739 | 0.0 | 1022 |
| Msa0937050 | MtrunA17_Chr1g0166131 | 66.484 | 728 | 237 | 4 | 6 | 730 | 17 | 740 | 0.0 | 997 |
| Msa0937050 | MtrunA17_Chr7g0231701 | 66.960 | 681 | 213 | 3 | 50 | 730 | 40 | 708 | 0.0 | 947 |
| Msa0937050 | MtrunA17_Chr1g0166141 | 68.114 | 599 | 188 | 2 | 134 | 730 | 77 | 674 | 0.0 | 843 |
| Msa0937050 | MtrunA17_Chr1g0166141 | 68.421 | 76 | 24 | 0 | 275 | 350 | 1 | 76 | 6.92e-27 | 116 |
| Msa0937050 | MtrunA17_Chr7g0231741 | 77.480 | 373 | 83 | 1 | 358 | 730 | 4 | 375 | 0.0 | 620 |
| Msa0937050 | MtrunA17_Chr2g0285881 | 41.033 | 736 | 408 | 13 | 4 | 730 | 74 | 792 | 0.0 | 545 |
| Msa0937050 | MtrunA17_Chr5g0416691 | 57.673 | 404 | 164 | 4 | 329 | 730 | 3 | 401 | 2.65e-164 | 479 |
| Msa0937050 | MtrunA17_Chr5g0416731 | 57.971 | 414 | 129 | 2 | 50 | 418 | 25 | 438 | 1.47e-162 | 476 |
| Msa0937050 | MtrunA17_Chr7g0231791 | 57.178 | 404 | 166 | 4 | 329 | 730 | 3 | 401 | 7.28e-162 | 473 |
| Msa0937050 | MtrunA17_Chr5g0416831 | 65.749 | 327 | 74 | 3 | 404 | 730 | 1 | 289 | 2.53e-148 | 434 |
| Msa0937050 | MtrunA17_Chr7g0231751 | 64.706 | 306 | 108 | 0 | 2 | 307 | 5 | 310 | 1.72e-141 | 417 |
| Msa0937050 | MtrunA17_Chr7g0231721 | 61.702 | 329 | 119 | 2 | 50 | 377 | 25 | 347 | 1.29e-140 | 416 |
| Msa0937050 | MtrunA17_Chr5g0416901 | 60.568 | 317 | 124 | 1 | 52 | 368 | 21 | 336 | 2.66e-136 | 405 |
| Msa0937050 | MtrunA17_Chr7g0231581 | 60.064 | 313 | 124 | 1 | 56 | 368 | 1 | 312 | 5.55e-132 | 393 |
| Msa0937050 | MtrunA17_Chr2g0296381 | 33.378 | 743 | 450 | 14 | 23 | 730 | 10 | 742 | 8.80e-130 | 402 |
| Msa0937050 | MtrunA17_Chr4g0067011 | 33.110 | 746 | 448 | 14 | 23 | 730 | 12 | 744 | 4.51e-127 | 395 |
| Msa0937050 | MtrunA17_Chr7g0231571 | 60.163 | 246 | 97 | 1 | 56 | 301 | 1 | 245 | 7.46e-100 | 307 |
| Msa0937050 | MtrunA17_Chr5g0416911 | 58.400 | 250 | 103 | 1 | 52 | 301 | 5 | 253 | 7.00e-98 | 303 |
| Msa0937050 | MtrunA17_Chr7g0268881 | 39.848 | 394 | 222 | 7 | 344 | 730 | 4 | 389 | 2.82e-80 | 261 |
| Msa0937050 | MtrunA17_Chr7g0231801 | 51.793 | 251 | 119 | 2 | 56 | 304 | 1 | 251 | 9.01e-80 | 255 |
| Msa0937050 | MtrunA17_Chr5g0416681 | 51.793 | 251 | 119 | 2 | 56 | 304 | 1 | 251 | 9.33e-79 | 253 |
| Msa0937050 | MtrunA17_Chr5g0416931 | 62.424 | 165 | 62 | 0 | 50 | 214 | 38 | 202 | 9.33e-67 | 219 |
| Msa0937050 | MtrunA17_Chr1g0166151 | 57.143 | 182 | 77 | 1 | 80 | 261 | 1 | 181 | 4.18e-64 | 211 |
| Msa0937050 | MtrunA17_Chr7g0231561 | 60.377 | 159 | 63 | 0 | 56 | 214 | 1 | 159 | 1.10e-62 | 206 |
| Msa0937050 | MtrunA17_Chr7g0268891 | 29.260 | 311 | 201 | 6 | 23 | 317 | 9 | 316 | 7.40e-42 | 155 |
| Msa0937050 | MtrunA17_Chr5g0416841 | 64.211 | 95 | 34 | 0 | 204 | 298 | 14 | 108 | 1.21e-35 | 130 |
| Msa0937050 | MtrunA17_Chr5g0416721 | 68.627 | 51 | 16 | 0 | 1 | 51 | 4 | 54 | 4.72e-19 | 81.6 |
| Msa0937050 | MtrunA17_Chr7g0231731 | 64.706 | 51 | 18 | 0 | 1 | 51 | 4 | 54 | 1.09e-17 | 77.8 |
| Msa0937050 | MtrunA17_Chr7g0231711 | 56.000 | 50 | 21 | 1 | 2 | 51 | 5 | 53 | 2.38e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0937050 | AT1G26830.1 | 75.583 | 729 | 177 | 1 | 2 | 730 | 5 | 732 | 0.0 | 1179 |
| Msa0937050 | AT1G69670.1 | 75.034 | 729 | 181 | 1 | 2 | 730 | 5 | 732 | 0.0 | 1163 |
| Msa0937050 | AT1G69670.2 | 75.034 | 729 | 181 | 1 | 2 | 730 | 5 | 732 | 0.0 | 1163 |
| Msa0937050 | AT5G46210.1 | 41.337 | 733 | 410 | 13 | 4 | 730 | 74 | 792 | 1.10e-176 | 525 |
| Msa0937050 | AT4G02570.4 | 34.746 | 708 | 425 | 13 | 49 | 730 | 42 | 738 | 6.09e-135 | 416 |
| Msa0937050 | AT4G02570.2 | 34.746 | 708 | 425 | 13 | 49 | 730 | 42 | 738 | 6.09e-135 | 416 |
| Msa0937050 | AT4G02570.1 | 34.746 | 708 | 425 | 13 | 49 | 730 | 42 | 738 | 6.09e-135 | 416 |
| Msa0937050 | AT4G02570.3 | 34.746 | 708 | 425 | 13 | 49 | 730 | 42 | 738 | 6.09e-135 | 416 |
| Msa0937050 | AT1G02980.1 | 33.520 | 716 | 428 | 14 | 48 | 730 | 42 | 742 | 1.47e-119 | 376 |
| Msa0937050 | AT1G02980.2 | 33.520 | 716 | 428 | 14 | 48 | 730 | 42 | 742 | 1.47e-119 | 376 |
| Msa0937050 | AT1G43140.1 | 33.050 | 705 | 415 | 16 | 49 | 730 | 51 | 721 | 8.08e-109 | 347 |
| Msa0937050 | AT1G59790.2 | 27.469 | 324 | 219 | 7 | 49 | 363 | 48 | 364 | 2.89e-33 | 132 |
| Msa0937050 | AT1G59790.1 | 26.415 | 318 | 218 | 7 | 49 | 357 | 48 | 358 | 6.44e-30 | 122 |
| Msa0937050 | AT1G59800.1 | 27.536 | 207 | 144 | 3 | 49 | 251 | 43 | 247 | 1.78e-22 | 97.8 |
| Msa0937050 | AT4G12100.1 | 23.269 | 361 | 237 | 11 | 21 | 365 | 76 | 412 | 1.25e-17 | 86.7 |
Find 159 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCATCGTTGGAGAATT+TGG | 0.044642 | 6_3:-8113744 | None:intergenic |
| ACAGGATCTTTCAACCTTTC+AGG | 0.150230 | 6_3:-8116837 | None:intergenic |
| AATATGGTGCTACATAAATT+TGG | 0.153660 | 6_3:+8116042 | Msa0937050:CDS |
| AAATTCCCATTCACACTTCT+AGG | 0.220737 | 6_3:+8113692 | Msa0937050:five_prime_UTR |
| ATTGACGTGGCAAGCTAATA+TGG | 0.230633 | 6_3:+8117475 | Msa0937050:CDS |
| TATGGGGAATGCTGATTTAA+AGG | 0.232083 | 6_3:+8117493 | Msa0937050:CDS |
| ATGAACTTGGTTTGAATCTA+TGG | 0.232138 | 6_3:+8116271 | Msa0937050:CDS |
| AATTAAGATGCTGACGGATT+TGG | 0.234870 | 6_3:+8116410 | Msa0937050:CDS |
| TCAGCTTTGAAGAGCTTTAT+AGG | 0.248136 | 6_3:+8113889 | Msa0937050:CDS |
| GTAAACAAACTAGGCTTGTT+AGG | 0.249206 | 6_3:+8118209 | Msa0937050:three_prime_UTR |
| CTAGCAAAGAGGCTTCTTTC+GGG | 0.256381 | 6_3:+8117149 | Msa0937050:CDS |
| AAACTTCGTAGAGGGATAAA+AGG | 0.263934 | 6_3:+8117026 | Msa0937050:CDS |
| TTTGTAGAAACTTGAATAAA+AGG | 0.270110 | 6_3:-8116465 | None:intergenic |
| ATATGGTGCTACATAAATTT+GGG | 0.301338 | 6_3:+8116043 | Msa0937050:CDS |
| TTGTTTCGTAGGGTACCTTC+TGG | 0.309037 | 6_3:+8116747 | Msa0937050:CDS |
| ATTAAGATGCTGACGGATTT+GGG | 0.311827 | 6_3:+8116411 | Msa0937050:CDS |
| TCTTCATCGTTGGAGAATTT+GGG | 0.332605 | 6_3:-8113743 | None:intergenic |
| TACTGGTAAGCAGTTAATTA+TGG | 0.332800 | 6_3:+8116812 | Msa0937050:CDS |
| CCTAGCAAAGAGGCTTCTTT+CGG | 0.333153 | 6_3:+8117148 | Msa0937050:CDS |
| GTTCAGGAATGCTTATAATA+TGG | 0.335111 | 6_3:+8116026 | Msa0937050:intron |
| AAACATTCAGCTCATGCTTC+TGG | 0.345881 | 6_3:-8117532 | None:intergenic |
| TCAGAAACTAGGGTTTCATT+TGG | 0.354767 | 6_3:-8113670 | None:intergenic |
| CAAACACATCCTTCTCTTGC+AGG | 0.358631 | 6_3:-8117106 | None:intergenic |
| AGAGTTCATTTCTTTGTTTG+TGG | 0.365470 | 6_3:+8116998 | Msa0937050:CDS |
| CTAGGGTTTCATTTGGGAAA+TGG | 0.369545 | 6_3:-8113663 | None:intergenic |
| GCTGATTTAAAGGCTACATT+TGG | 0.371270 | 6_3:+8117503 | Msa0937050:CDS |
| TAGTCTTAGTTTCGTTAGAA+TGG | 0.378273 | 6_3:-8116308 | None:intergenic |
| TTCAAACCAAGTTCATGAAC+AGG | 0.392825 | 6_3:-8116264 | None:intergenic |
| GGAAGATTACATTGCGGACT+AGG | 0.395922 | 6_3:-8117386 | None:intergenic |
| CAGAAACTAGGGTTTCATTT+GGG | 0.396504 | 6_3:-8113669 | None:intergenic |
| GTAATCTTCCATCTGAAATC+CGG | 0.403875 | 6_3:+8117399 | Msa0937050:CDS |
| TTGTTAGGGTCACTTCTGTT+TGG | 0.404372 | 6_3:+8118224 | Msa0937050:three_prime_UTR |
| TCATTTGCAATGCCTTGTTA+TGG | 0.406474 | 6_3:-8116185 | None:intergenic |
| ATTCACTAGCAAGCTCTTCA+AGG | 0.417223 | 6_3:+8117760 | Msa0937050:CDS |
| TCAGATATGTCCTTGCTCAT+TGG | 0.420832 | 6_3:-8117710 | None:intergenic |
| AGCAGCTCATGGTGCTGAGT+TGG | 0.421446 | 6_3:+8117307 | Msa0937050:CDS |
| TATCCACACTCTCGTTCATA+TGG | 0.433213 | 6_3:+8116659 | Msa0937050:CDS |
| ATTGCTTTCTTCTTCATCGT+TGG | 0.435119 | 6_3:-8113753 | None:intergenic |
| AACTTCGTAGAGGGATAAAA+GGG | 0.437841 | 6_3:+8117027 | Msa0937050:CDS |
| GAGGCGTTTAAATGAAGAAA+TGG | 0.441848 | 6_3:+8116557 | Msa0937050:CDS |
| GCAGCTCATGGTGCTGAGTT+GGG | 0.442390 | 6_3:+8117308 | Msa0937050:CDS |
| AAAACCCCTGTTCATGAACT+TGG | 0.443461 | 6_3:+8116258 | Msa0937050:CDS |
| GACTTCTTATGATATGATGC+AGG | 0.444611 | 6_3:+8117277 | Msa0937050:CDS |
| TTTAAAGGCTACATTTGGTA+AGG | 0.448303 | 6_3:+8117508 | Msa0937050:CDS |
| TGTTTCGTAGGGTACCTTCT+GGG | 0.451428 | 6_3:+8116748 | Msa0937050:CDS |
| ATTCTGAAATGACTTGTCAT+TGG | 0.452379 | 6_3:-8116925 | None:intergenic |
| CGTTGGAGAATTTGGGAAAA+CGG | 0.459338 | 6_3:-8113736 | None:intergenic |
| TTGTGAGGGTAATGAAATCT+AGG | 0.460014 | 6_3:+8117885 | Msa0937050:CDS |
| TTGACGTGGCAAGCTAATAT+GGG | 0.461661 | 6_3:+8117476 | Msa0937050:CDS |
| TCTGTCCAGGTGCTTACAAC+AGG | 0.465386 | 6_3:+8117347 | Msa0937050:CDS |
| ATATCAATTCACTTCTAAGT+TGG | 0.468165 | 6_3:+8117232 | Msa0937050:CDS |
| AGGGACTGTTGTTGCACAAA+GGG | 0.470120 | 6_3:+8117790 | Msa0937050:CDS |
| AAGTTTCGTAATTATTATCT+CGG | 0.473608 | 6_3:+8117434 | Msa0937050:CDS |
| CAGTCGTTGGCCTTAGTCAA+AGG | 0.474202 | 6_3:+8117665 | Msa0937050:CDS |
| CAGGGTTTCTTAGCAGCTCA+TGG | 0.476009 | 6_3:+8117296 | Msa0937050:CDS |
| AAGGCTTCTCAAAGTCAGTC+TGG | 0.477739 | 6_3:-8116446 | None:intergenic |
| AATTCCCATTCACACTTCTA+GGG | 0.483028 | 6_3:+8113693 | Msa0937050:five_prime_UTR |
| ATATTCAAATGCAGAATTCA+AGG | 0.485048 | 6_3:-8116949 | None:intergenic |
| GATGACTTGTAAGGAGATAG+AGG | 0.485343 | 6_3:+8117601 | Msa0937050:CDS |
| TAATCTTCCATCTGAAATCC+GGG | 0.485583 | 6_3:+8117400 | Msa0937050:CDS |
| AATGGGAATTTCAGAAACTA+GGG | 0.488922 | 6_3:-8113680 | None:intergenic |
| TCAATTCACTTCTAAGTTGG+AGG | 0.491593 | 6_3:+8117235 | Msa0937050:CDS |
| TGGAGGAACTCAACAGGAAG+TGG | 0.491844 | 6_3:+8116157 | Msa0937050:CDS |
| AGGTGCTTACAACAGGTTCA+TGG | 0.492266 | 6_3:+8117354 | Msa0937050:CDS |
| GAATGTATAACTTGTTTCGT+AGG | 0.493143 | 6_3:+8116736 | Msa0937050:CDS |
| CGAGGTCACGAAGCAGCTGC+AGG | 0.494325 | 6_3:+8117937 | Msa0937050:CDS |
| GATAAAAGGGGTTGGTGAGG+AGG | 0.495340 | 6_3:+8117040 | Msa0937050:CDS |
| AGTCGTTGGCCTTAGTCAAA+GGG | 0.498877 | 6_3:+8117666 | Msa0937050:CDS |
| GAAAACCCTAGAAGTGTGAA+TGG | 0.498973 | 6_3:-8113698 | None:intergenic |
| CCGAAAGAAGCCTCTTTGCT+AGG | 0.499740 | 6_3:-8117148 | None:intergenic |
| CCGAGACATACTCATGTACA+TGG | 0.503098 | 6_3:+8116209 | Msa0937050:CDS |
| GAAGAGGTGCCTTCAGTCGT+TGG | 0.504097 | 6_3:+8117652 | Msa0937050:CDS |
| CATTGCGGACTAGGTTGAGT+TGG | 0.504999 | 6_3:-8117377 | None:intergenic |
| CATCAATGAGCATATTAACT+AGG | 0.505030 | 6_3:-8116692 | None:intergenic |
| AGAAATGAACTCTGGAGATC+GGG | 0.506629 | 6_3:-8116988 | None:intergenic |
| AAGAAATGAACTCTGGAGAT+CGG | 0.506678 | 6_3:-8116989 | None:intergenic |
| AGGGATAAAAGGGGTTGGTG+AGG | 0.506807 | 6_3:+8117037 | Msa0937050:CDS |
| GGAGAGAGTATCTCACTACT+TGG | 0.507157 | 6_3:+8116578 | Msa0937050:CDS |
| TAAACAAACTAGGCTTGTTA+GGG | 0.514850 | 6_3:+8118210 | Msa0937050:three_prime_UTR |
| TTTGGGGAGAAACTTTACTC+TGG | 0.520439 | 6_3:+8116060 | Msa0937050:CDS |
| CAGTTAAAACAATTTCATCA+TGG | 0.521284 | 6_3:+8118131 | Msa0937050:three_prime_UTR |
| GAATGGGAATTTCAGAAACT+AGG | 0.526336 | 6_3:-8113681 | None:intergenic |
| CATCCTTCTCTTGCAGGTAC+CGG | 0.527813 | 6_3:-8117100 | None:intergenic |
| AATGTATAACTTGTTTCGTA+GGG | 0.534146 | 6_3:+8116737 | Msa0937050:CDS |
| ACAAACAAAGAAATGAACTC+TGG | 0.544090 | 6_3:-8116996 | None:intergenic |
| AGACAGAAAGCCGCAGATTG+AGG | 0.544522 | 6_3:+8117856 | Msa0937050:CDS |
| CAATCAATCAAAGCTGCTCA+AGG | 0.545434 | 6_3:+8116123 | Msa0937050:CDS |
| TATAGAAACTCGACAAAGAG+TGG | 0.546676 | 6_3:+8117829 | Msa0937050:CDS |
| CTGCAGCTGCTTCGTGACCT+CGG | 0.548193 | 6_3:-8117936 | None:intergenic |
| TTTGGTAGAACTGAAAGTGA+AGG | 0.548386 | 6_3:-8113633 | None:intergenic |
| TGCTGATCGGATGACTTGTA+AGG | 0.549561 | 6_3:+8117592 | Msa0937050:CDS |
| AAAACCCTAGAAGTGTGAAT+GGG | 0.550472 | 6_3:-8113697 | None:intergenic |
| TTAATTGAATCATGTGATTG+TGG | 0.550947 | 6_3:+8116513 | Msa0937050:CDS |
| CATAGACCCCGGATTTCAGA+TGG | 0.553988 | 6_3:-8117407 | None:intergenic |
| TGACTAAGGCCAACGACTGA+AGG | 0.554710 | 6_3:-8117661 | None:intergenic |
| AAAGCATTAGTACACACATC+TGG | 0.555795 | 6_3:-8117562 | None:intergenic |
| TTAATCGTTGTGAGCCCAGA+AGG | 0.557812 | 6_3:-8116762 | None:intergenic |
| CTTAAGCTCAAAACAGAATG+TGG | 0.557946 | 6_3:+8117209 | Msa0937050:CDS |
| TAGCCCTACACTATCTGTCC+AGG | 0.560211 | 6_3:+8117334 | Msa0937050:CDS |
| ATTTACAATCGTAACGCTAG+TGG | 0.563604 | 6_3:+8113864 | Msa0937050:CDS |
| TTAAAGGCTACATTTGGTAA+GGG | 0.566080 | 6_3:+8117509 | Msa0937050:CDS |
| ATGAACCTGTTGTAAGCACC+TGG | 0.566331 | 6_3:-8117352 | None:intergenic |
| TACCCATGTCAGACTTGAAG+AGG | 0.566524 | 6_3:+8117636 | Msa0937050:CDS |
| CAATTCACTTCTAAGTTGGA+GGG | 0.568094 | 6_3:+8117236 | Msa0937050:CDS |
| TGATGACAAATATGATGACT+TGG | 0.569545 | 6_3:+8116710 | Msa0937050:CDS |
| TTGACCTTGTGCTTAAAGAG+AGG | 0.571221 | 6_3:+8116349 | Msa0937050:CDS |
| GAGGGTAATGAAATCTAGGC+GGG | 0.574043 | 6_3:+8117889 | Msa0937050:CDS |
| CATTCCTCTCTTTAAGCACA+AGG | 0.575206 | 6_3:-8116353 | None:intergenic |
| TTGCGCATAGTAAACAAACT+AGG | 0.579068 | 6_3:+8118200 | Msa0937050:three_prime_UTR |
| AGACGCTGCACAAAATCGAC+AGG | 0.580439 | 6_3:-8116855 | None:intergenic |
| TTTCCGGTACCTGCAAGAGA+AGG | 0.581468 | 6_3:+8117097 | Msa0937050:CDS |
| GCACCTCTTCAAGTCTGACA+TGG | 0.581848 | 6_3:-8117639 | None:intergenic |
| ACTTCTTATGATATGATGCA+GGG | 0.582653 | 6_3:+8117278 | Msa0937050:CDS |
| CCATGTACATGAGTATGTCT+CGG | 0.582690 | 6_3:-8116209 | None:intergenic |
| TGGATGACAAACTTCGTAGA+GGG | 0.586598 | 6_3:+8117018 | Msa0937050:CDS |
| TTGTCTCAGATGAGCAGTAA+CGG | 0.592895 | 6_3:-8116094 | None:intergenic |
| CGTAGAGGGATAAAAGGGGT+TGG | 0.600611 | 6_3:+8117032 | Msa0937050:CDS |
| TTATAAGCACCGTGTAGTTG+TGG | 0.601194 | 6_3:+8113788 | Msa0937050:CDS |
| CTCGTTCATATGGAGAACTC+AGG | 0.601425 | 6_3:+8116669 | Msa0937050:CDS |
| GAACTTAATTAAGATGCTGA+CGG | 0.603217 | 6_3:+8116404 | Msa0937050:CDS |
| AGTTAATTATGGATCCTGAA+AGG | 0.604723 | 6_3:+8116823 | Msa0937050:CDS |
| TAGGGACTGTTGTTGCACAA+AGG | 0.608557 | 6_3:+8117789 | Msa0937050:CDS |
| CAAACCAAGTTCATGAACAG+GGG | 0.610124 | 6_3:-8116262 | None:intergenic |
| TCGGAAAGAGCCAATGAGCA+AGG | 0.610423 | 6_3:+8117700 | Msa0937050:CDS |
| TCTCCATATGAACGAGAGTG+TGG | 0.611580 | 6_3:-8116662 | None:intergenic |
| TATGGTGCTACATAAATTTG+GGG | 0.615594 | 6_3:+8116044 | Msa0937050:CDS |
| TCAAACCAAGTTCATGAACA+GGG | 0.617319 | 6_3:-8116263 | None:intergenic |
| AGATTGAGGCAGCAATTGTG+AGG | 0.619824 | 6_3:+8117870 | Msa0937050:CDS |
| TAGCAAAGAGGCTTCTTTCG+GGG | 0.621837 | 6_3:+8117150 | Msa0937050:CDS |
| ATAAGCAACACCTAGCAAAG+AGG | 0.626717 | 6_3:+8117138 | Msa0937050:CDS |
| GTCAGAGATAACTAGTGTGG+TGG | 0.630259 | 6_3:+8116614 | Msa0937050:CDS |
| TTATTAACAGAGGCTTGATG+AGG | 0.631918 | 6_3:+8116382 | Msa0937050:CDS |
| ACAATTGCTGCCTCAATCTG+CGG | 0.633040 | 6_3:-8117866 | None:intergenic |
| AATGGTGAAGTTATTAACAG+AGG | 0.635361 | 6_3:+8116372 | Msa0937050:CDS |
| TACTGTTTCAAGCAAGATAG+CGG | 0.637161 | 6_3:-8118057 | None:intergenic |
| GAAACTTCTCACATAGACCC+CGG | 0.641304 | 6_3:-8117418 | None:intergenic |
| CACCTCTTCAAGTCTGACAT+GGG | 0.641603 | 6_3:-8117638 | None:intergenic |
| GGAGGAACTCAACAGGAAGT+GGG | 0.642357 | 6_3:+8116158 | Msa0937050:CDS |
| GTGGATGACAAACTTCGTAG+AGG | 0.651149 | 6_3:+8117017 | Msa0937050:CDS |
| GGGGAAGACTGTATCAGATG+AGG | 0.654353 | 6_3:+8117169 | Msa0937050:CDS |
| TGACGTGGCAAGCTAATATG+GGG | 0.657176 | 6_3:+8117477 | Msa0937050:CDS |
| GACTTGTAAGGAGATAGAGG+AGG | 0.657826 | 6_3:+8117604 | Msa0937050:CDS |
| ATTCTAACGAAACTAAGACT+AGG | 0.662282 | 6_3:+8116310 | Msa0937050:CDS |
| TGAGTCAGAGATAACTAGTG+TGG | 0.673139 | 6_3:+8116611 | Msa0937050:CDS |
| GATTGAGGCAGCAATTGTGA+GGG | 0.673825 | 6_3:+8117871 | Msa0937050:CDS |
| AGTTAGGATCCACAACTACA+CGG | 0.678703 | 6_3:-8113797 | None:intergenic |
| AGAAACTCGACAAAGAGTGG+AGG | 0.680888 | 6_3:+8117832 | Msa0937050:CDS |
| AGCACCTGGACAGATAGTGT+AGG | 0.681962 | 6_3:-8117338 | None:intergenic |
| ACATAATAATGTCATCGCCG+AGG | 0.682843 | 6_3:+8117919 | Msa0937050:CDS |
| TATTATCTCGGCGCTCACAG+TGG | 0.685408 | 6_3:+8117446 | Msa0937050:CDS |
| TCAGATGGAAGATTACATTG+CGG | 0.706660 | 6_3:-8117392 | None:intergenic |
| AATCTTCCATCTGAAATCCG+GGG | 0.712246 | 6_3:+8117401 | Msa0937050:CDS |
| TGAGGGTAATGAAATCTAGG+CGG | 0.717066 | 6_3:+8117888 | Msa0937050:CDS |
| CTTGTGCTTAAAGAGAGGAA+TGG | 0.720232 | 6_3:+8116354 | Msa0937050:CDS |
| GAAGTGGGTAGACCATAACA+AGG | 0.733172 | 6_3:+8116173 | Msa0937050:CDS |
| ATTATCTGAAGAAAGCTGAG+AGG | 0.737332 | 6_3:+8116538 | Msa0937050:CDS |
| ACTTCGTAGAGGGATAAAAG+GGG | 0.737364 | 6_3:+8117028 | Msa0937050:CDS |
| ATATGACAAAGTTATCACAA+CGG | 0.738442 | 6_3:+8116896 | Msa0937050:CDS |
| ACAGTGGTAGGAGATTGACG+TGG | 0.831078 | 6_3:+8117462 | Msa0937050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTTTTTTATTTAAA+CGG | - | chr6_3:8114652-8114671 | None:intergenic | 0.0% |
| !!! | GTTTTTTGTTAATTAATTTT+GGG | + | chr6_3:8113965-8113984 | Msa0937050:intron | 10.0% |
| !!! | TTATTTTATATTTGATCATA+TGG | + | chr6_3:8114021-8114040 | Msa0937050:intron | 10.0% |
| !! | AAATTAATTTAGTAGTAATA+TGG | + | chr6_3:8114616-8114635 | Msa0937050:intron | 10.0% |
| !!! | CAATTTTATTGATCATAATT+TGG | + | chr6_3:8113943-8113962 | Msa0937050:intron | 15.0% |
| !!! | GGTTTTTTGTTAATTAATTT+TGG | + | chr6_3:8113964-8113983 | Msa0937050:intron | 15.0% |
| !!! | TAGTTTTTGTGAATTAATTT+TGG | + | chr6_3:8113994-8114013 | Msa0937050:intron | 15.0% |
| !!! | TTGTTTTTTATATGATGATA+TGG | + | chr6_3:8114462-8114481 | Msa0937050:intron | 15.0% |
| !!! | TTTTTTATTTTTGAGAAATG+TGG | + | chr6_3:8114506-8114525 | Msa0937050:intron | 15.0% |
| !!! | TTTCTATATTTTGTTTTTTG+AGG | + | chr6_3:8115395-8115414 | Msa0937050:intron | 15.0% |
| !!! | TTCTATATTTTGTTTTTTGA+GGG | + | chr6_3:8115396-8115415 | Msa0937050:intron | 15.0% |
| !!! | TTATAAAAATCCCATTTTTT+TGG | + | chr6_3:8115493-8115512 | Msa0937050:intron | 15.0% |
| !! | ATTAAATAAATTCAGATTGT+TGG | + | chr6_3:8115714-8115733 | Msa0937050:intron | 15.0% |
| !! | TTTACTCAAATTTAACTAAA+TGG | - | chr6_3:8115846-8115865 | None:intergenic | 15.0% |
| !!! | ACATGATTCAATTAATTTTT+GGG | - | chr6_3:8116508-8116527 | None:intergenic | 15.0% |
| !!! | AGTTAATTTTGTGATTGAAA+TGG | + | chr6_3:8114166-8114185 | Msa0937050:intron | 20.0% |
| !! | AAATGAAAATATTAGAGAGT+TGG | + | chr6_3:8114378-8114397 | Msa0937050:intron | 20.0% |
| !! | ATGATGATATATCTATGATA+TGG | + | chr6_3:8114695-8114714 | Msa0937050:intron | 20.0% |
| !! | TTTAAATTAAATTGTAGCTG+CGG | + | chr6_3:8115153-8115172 | Msa0937050:intron | 20.0% |
| !!! | TCTATATTTTGTTTTTTGAG+GGG | + | chr6_3:8115397-8115416 | Msa0937050:intron | 20.0% |
| !!! | GGGATTGTTTTATATTATTA+TGG | + | chr6_3:8115417-8115436 | Msa0937050:intron | 20.0% |
| !! | TAAAAGTGAACCAAAAAAAT+GGG | - | chr6_3:8115506-8115525 | None:intergenic | 20.0% |
| !! | ATAAAAGTGAACCAAAAAAA+TGG | - | chr6_3:8115507-8115526 | None:intergenic | 20.0% |
| !!! | CAATGATTTGTATTAGAAAA+TGG | + | chr6_3:8115531-8115550 | Msa0937050:intron | 20.0% |
| !! | AGTTATAGTGTATAACAATT+AGG | - | chr6_3:8115935-8115954 | None:intergenic | 20.0% |
| !! | TTTGTAGAAACTTGAATAAA+AGG | - | chr6_3:8116468-8116487 | None:intergenic | 20.0% |
| !!! | CACATGATTCAATTAATTTT+TGG | - | chr6_3:8116509-8116528 | None:intergenic | 20.0% |
| !! | AAGTTTCGTAATTATTATCT+CGG | + | chr6_3:8117434-8117453 | Msa0937050:CDS | 20.0% |
| !!! | TTTTTAATAACAACAGGATT+AGG | - | chr6_3:8117974-8117993 | None:intergenic | 20.0% |
| !!! | CTGTTTAAACAATTTTATCA+TGG | + | chr6_3:8118097-8118116 | Msa0937050:three_prime_UTR | 20.0% |
| !!! | TTGGGAAATGGTTTTTTTTT+TGG | - | chr6_3:8113654-8113673 | None:intergenic | 25.0% |
| ! | TTTGATCATATGGATGATTA+TGG | + | chr6_3:8114031-8114050 | Msa0937050:intron | 25.0% |
| !!! | GAATTACATTTTAACCTTTG+TGG | + | chr6_3:8114792-8114811 | Msa0937050:intron | 25.0% |
| ! | GAATCTTTAGTTACAAATAG+AGG | + | chr6_3:8114838-8114857 | Msa0937050:intron | 25.0% |
| ! | TTAACGTCTTTACAATCTTT+AGG | - | chr6_3:8115238-8115257 | None:intergenic | 25.0% |
| ! | TTGTAAAGACGTTAATATTG+AGG | + | chr6_3:8115243-8115262 | Msa0937050:intron | 25.0% |
| ! | AATTTCAAAACCATGCTTTA+CGG | + | chr6_3:8115277-8115296 | Msa0937050:intron | 25.0% |
| !! | ATTATTATGGTCTGTTTCTT+TGG | + | chr6_3:8115430-8115449 | Msa0937050:intron | 25.0% |
| !! | TTATTATGGTCTGTTTCTTT+GGG | + | chr6_3:8115431-8115450 | Msa0937050:intron | 25.0% |
| ! | AGAAATCAGAATACAGATAT+AGG | - | chr6_3:8115783-8115802 | None:intergenic | 25.0% |
| ! | TGCTATTCGTGTTATAAAAT+AGG | + | chr6_3:8115880-8115899 | Msa0937050:intron | 25.0% |
| ! | GCTATTCGTGTTATAAAATA+GGG | + | chr6_3:8115881-8115900 | Msa0937050:intron | 25.0% |
| ! | TATTTGGGCATATATGTATA+TGG | + | chr6_3:8115981-8116000 | Msa0937050:intron | 25.0% |
| ! | ATTTGGGCATATATGTATAT+GGG | + | chr6_3:8115982-8116001 | Msa0937050:intron | 25.0% |
| !!! | TAATCATAATTTGTTCGTTC+AGG | + | chr6_3:8116010-8116029 | Msa0937050:intron | 25.0% |
| !!! | AATATGGTGCTACATAAATT+TGG | + | chr6_3:8116042-8116061 | Msa0937050:CDS | 25.0% |
| !!! | ATATGGTGCTACATAAATTT+GGG | + | chr6_3:8116043-8116062 | Msa0937050:CDS | 25.0% |
| ! | TTAATTGAATCATGTGATTG+TGG | + | chr6_3:8116513-8116532 | Msa0937050:CDS | 25.0% |
| !!! | AATGTATAACTTGTTTCGTA+GGG | + | chr6_3:8116737-8116756 | Msa0937050:CDS | 25.0% |
| !! | ATGTCATGACTTCTTTTATA+CGG | + | chr6_3:8116787-8116806 | Msa0937050:CDS | 25.0% |
| ! | ATATGACAAAGTTATCACAA+CGG | + | chr6_3:8116896-8116915 | Msa0937050:CDS | 25.0% |
| ! | ATATTCAAATGCAGAATTCA+AGG | - | chr6_3:8116952-8116971 | None:intergenic | 25.0% |
| ! | ATATCAATTCACTTCTAAGT+TGG | + | chr6_3:8117232-8117251 | Msa0937050:CDS | 25.0% |
| !! | ATCCTGTTGTTATTAAAAAG+CGG | + | chr6_3:8117975-8117994 | Msa0937050:CDS | 25.0% |
| ! | CAGTTAAAACAATTTCATCA+TGG | + | chr6_3:8118131-8118150 | Msa0937050:three_prime_UTR | 25.0% |
| !! | CAGCATTATACTTTTCATTT+TGG | + | chr6_3:8118335-8118354 | Msa0937050:three_prime_UTR | 25.0% |
| AATGGGAATTTCAGAAACTA+GGG | - | chr6_3:8113683-8113702 | None:intergenic | 30.0% | |
| ! | TATGGATGATTATGGATTGA+TGG | + | chr6_3:8114039-8114058 | Msa0937050:intron | 30.0% |
| ! | ATGGATGATTATGGATTGAT+GGG | + | chr6_3:8114040-8114059 | Msa0937050:intron | 30.0% |
| AGAATTGCATTTCAATCTTG+AGG | + | chr6_3:8114125-8114144 | Msa0937050:intron | 30.0% | |
| ! | TAAAATTTTCCCTCGAACTT+GGG | - | chr6_3:8114221-8114240 | None:intergenic | 30.0% |
| ! | ATAAAATTTTCCCTCGAACT+TGG | - | chr6_3:8114222-8114241 | None:intergenic | 30.0% |
| ! | AGTTCGAGGGAAAATTTTAT+CGG | + | chr6_3:8114222-8114241 | Msa0937050:intron | 30.0% |
| TATGGATGATTATGTCTTGA+TGG | + | chr6_3:8114480-8114499 | Msa0937050:intron | 30.0% | |
| ATGGATGATTATGTCTTGAT+GGG | + | chr6_3:8114481-8114500 | Msa0937050:intron | 30.0% | |
| TTTAACCTTTGTGGAATTTG+AGG | + | chr6_3:8114801-8114820 | Msa0937050:intron | 30.0% | |
| TTAATCCTCAAATTCCACAA+AGG | - | chr6_3:8114809-8114828 | None:intergenic | 30.0% | |
| !! | AAACTTTAAAGCTCTCACAA+TGG | - | chr6_3:8115135-8115154 | None:intergenic | 30.0% |
| TGTTGTATTGCTAAAACTTG+CGG | + | chr6_3:8115177-8115196 | Msa0937050:intron | 30.0% | |
| ! | TTTTAGTGCCTATTCTGTTT+TGG | + | chr6_3:8115579-8115598 | Msa0937050:intron | 30.0% |
| AATCACATCGAAAAATTCTC+TGG | + | chr6_3:8115646-8115665 | Msa0937050:intron | 30.0% | |
| AAAATTCTCTGGATGCTATT+TGG | + | chr6_3:8115657-8115676 | Msa0937050:intron | 30.0% | |
| TGCTTCTGCTTAATCATATT+TGG | + | chr6_3:8115689-8115708 | Msa0937050:intron | 30.0% | |
| ! | TAGTTTTCCATTTAGTGAGA+AGG | + | chr6_3:8115737-8115756 | Msa0937050:intron | 30.0% |
| TTTGATGGAGGTTTATAGAA+TGG | - | chr6_3:8115819-8115838 | None:intergenic | 30.0% | |
| TAACTAAATGGCAAGTTTGA+TGG | - | chr6_3:8115834-8115853 | None:intergenic | 30.0% | |
| TCTCTACTAATCCTCATATT+TGG | + | chr6_3:8115965-8115984 | Msa0937050:intron | 30.0% | |
| CTCTACTAATCCTCATATTT+GGG | + | chr6_3:8115966-8115985 | Msa0937050:intron | 30.0% | |
| TACATATATGCCCAAATATG+AGG | - | chr6_3:8115979-8115998 | None:intergenic | 30.0% | |
| GTTCAGGAATGCTTATAATA+TGG | + | chr6_3:8116026-8116045 | Msa0937050:intron | 30.0% | |
| !! | TATGGTGCTACATAAATTTG+GGG | + | chr6_3:8116044-8116063 | Msa0937050:CDS | 30.0% |
| ! | ATGAACTTGGTTTGAATCTA+TGG | + | chr6_3:8116271-8116290 | Msa0937050:CDS | 30.0% |
| ! | TAGTCTTAGTTTCGTTAGAA+TGG | - | chr6_3:8116311-8116330 | None:intergenic | 30.0% |
| ATTCTAACGAAACTAAGACT+AGG | + | chr6_3:8116310-8116329 | Msa0937050:CDS | 30.0% | |
| AATGGTGAAGTTATTAACAG+AGG | + | chr6_3:8116372-8116391 | Msa0937050:CDS | 30.0% | |
| GAACTTAATTAAGATGCTGA+CGG | + | chr6_3:8116404-8116423 | Msa0937050:CDS | 30.0% | |
| CATCAATGAGCATATTAACT+AGG | - | chr6_3:8116695-8116714 | None:intergenic | 30.0% | |
| TGATGACAAATATGATGACT+TGG | + | chr6_3:8116710-8116729 | Msa0937050:CDS | 30.0% | |
| !! | GAATGTATAACTTGTTTCGT+AGG | + | chr6_3:8116736-8116755 | Msa0937050:CDS | 30.0% |
| ! | TGTCATGACTTCTTTTATAC+GGG | + | chr6_3:8116788-8116807 | Msa0937050:CDS | 30.0% |
| TACTGGTAAGCAGTTAATTA+TGG | + | chr6_3:8116812-8116831 | Msa0937050:CDS | 30.0% | |
| AGTTAATTATGGATCCTGAA+AGG | + | chr6_3:8116823-8116842 | Msa0937050:CDS | 30.0% | |
| !! | ATTCTGAAATGACTTGTCAT+TGG | - | chr6_3:8116928-8116947 | None:intergenic | 30.0% |
| ACAAACAAAGAAATGAACTC+TGG | - | chr6_3:8116999-8117018 | None:intergenic | 30.0% | |
| ! | AGAGTTCATTTCTTTGTTTG+TGG | + | chr6_3:8116998-8117017 | Msa0937050:CDS | 30.0% |
| ACTTCTTATGATATGATGCA+GGG | + | chr6_3:8117278-8117297 | Msa0937050:CDS | 30.0% | |
| TTTAAAGGCTACATTTGGTA+AGG | + | chr6_3:8117508-8117527 | Msa0937050:CDS | 30.0% | |
| TTAAAGGCTACATTTGGTAA+GGG | + | chr6_3:8117509-8117528 | Msa0937050:CDS | 30.0% | |
| ! | AACATTTTTCCCTTTGACTA+AGG | - | chr6_3:8117678-8117697 | None:intergenic | 30.0% |
| TCAAAGGGAAAAATGTTCTT+CGG | + | chr6_3:8117681-8117700 | Msa0937050:CDS | 30.0% | |
| AAGCTCTTCAAGGTAAAAAT+AGG | + | chr6_3:8117770-8117789 | Msa0937050:CDS | 30.0% | |
| AGCTCTTCAAGGTAAAAATA+GGG | + | chr6_3:8117771-8117790 | Msa0937050:CDS | 30.0% | |
| ! | TGTCGAGTTTCTATATTTTC+TGG | - | chr6_3:8117824-8117843 | None:intergenic | 30.0% |
| !!! | ATCCGCTTTTTAATAACAAC+AGG | - | chr6_3:8117980-8117999 | None:intergenic | 30.0% |
| !! | TAAACAAACTAGGCTTGTTA+GGG | + | chr6_3:8118210-8118229 | Msa0937050:three_prime_UTR | 30.0% |
| CAGAAACTAGGGTTTCATTT+GGG | - | chr6_3:8113672-8113691 | None:intergenic | 35.0% | |
| TCAGAAACTAGGGTTTCATT+TGG | - | chr6_3:8113673-8113692 | None:intergenic | 35.0% | |
| GAATGGGAATTTCAGAAACT+AGG | - | chr6_3:8113684-8113703 | None:intergenic | 35.0% | |
| AAATTCCCATTCACACTTCT+AGG | + | chr6_3:8113692-8113711 | Msa0937050:five_prime_UTR | 35.0% | |
| AATTCCCATTCACACTTCTA+GGG | + | chr6_3:8113693-8113712 | Msa0937050:five_prime_UTR | 35.0% | |
| ! | AAAACCCTAGAAGTGTGAAT+GGG | - | chr6_3:8113700-8113719 | None:intergenic | 35.0% |
| TCTTCATCGTTGGAGAATTT+GGG | - | chr6_3:8113746-8113765 | None:intergenic | 35.0% | |
| TTCTTCATCGTTGGAGAATT+TGG | - | chr6_3:8113747-8113766 | None:intergenic | 35.0% | |
| ATTGCTTTCTTCTTCATCGT+TGG | - | chr6_3:8113756-8113775 | None:intergenic | 35.0% | |
| !!! | CAAGTTTTTTCAGCGTAGTT+AGG | - | chr6_3:8113816-8113835 | None:intergenic | 35.0% |
| CTAACTACGCTGAAAAAACT+TGG | + | chr6_3:8113814-8113833 | Msa0937050:CDS | 35.0% | |
| ATTTACAATCGTAACGCTAG+TGG | + | chr6_3:8113864-8113883 | Msa0937050:CDS | 35.0% | |
| !! | TCAGCTTTGAAGAGCTTTAT+AGG | + | chr6_3:8113889-8113908 | Msa0937050:CDS | 35.0% |
| ! | CTTTGAAGAGCTTTATAGGT+TGG | + | chr6_3:8113893-8113912 | Msa0937050:intron | 35.0% |
| AAATTATTGCCCAAGTTCGA+GGG | + | chr6_3:8114209-8114228 | Msa0937050:intron | 35.0% | |
| ! | TCCACCATCTTTTCTGTTAT+GGG | - | chr6_3:8114411-8114430 | None:intergenic | 35.0% |
| ! | TTCCACCATCTTTTCTGTTA+TGG | - | chr6_3:8114412-8114431 | None:intergenic | 35.0% |
| !! | CAGAAAAGATGGTGGAAAAT+AGG | + | chr6_3:8114415-8114434 | Msa0937050:intron | 35.0% |
| GAATTGCATTTCAATCGTAG+TGG | + | chr6_3:8114567-8114586 | Msa0937050:intron | 35.0% | |
| ! | CATTTCAATCGTAGTGGAAT+TGG | + | chr6_3:8114573-8114592 | Msa0937050:intron | 35.0% |
| TGGATGATTATGTGTCTTGA+TGG | + | chr6_3:8114715-8114734 | Msa0937050:intron | 35.0% | |
| GGATGATTATGTGTCTTGAT+GGG | + | chr6_3:8114716-8114735 | Msa0937050:intron | 35.0% | |
| GTGGAATTTGAGGATTAAGT+AGG | + | chr6_3:8114811-8114830 | Msa0937050:intron | 35.0% | |
| CTCAATGTAATCACATCTGT+TGG | - | chr6_3:8114929-8114948 | None:intergenic | 35.0% | |
| TGTTCATGACTCAGATAGTA+TGG | - | chr6_3:8115026-8115045 | None:intergenic | 35.0% | |
| TATCTGAGTCATGAACATGA+AGG | + | chr6_3:8115029-8115048 | Msa0937050:intron | 35.0% | |
| ! | CATGAACATGAAGGTAGTTT+TGG | + | chr6_3:8115038-8115057 | Msa0937050:intron | 35.0% |
| TGACATTTGCAAGTTACGTT+TGG | + | chr6_3:8115350-8115369 | Msa0937050:intron | 35.0% | |
| ACAGAATAGGCACTAAAAAC+AGG | - | chr6_3:8115577-8115596 | None:intergenic | 35.0% | |
| ACCAACAACCAAAACAGAAT+AGG | - | chr6_3:8115590-8115609 | None:intergenic | 35.0% | |
| !!! | ATTCTGTTTTGGTTGTTGGT+TGG | + | chr6_3:8115590-8115609 | Msa0937050:intron | 35.0% |
| AGCTTTACCTTCTCACTAAA+TGG | - | chr6_3:8115747-8115766 | None:intergenic | 35.0% | |
| ! | TGCTCAAGGAGATATTTTCT+TGG | + | chr6_3:8116137-8116156 | Msa0937050:CDS | 35.0% |
| ! | TCAAGGAGATATTTTCTTGG+AGG | + | chr6_3:8116140-8116159 | Msa0937050:CDS | 35.0% |
| ! | TCATTTGCAATGCCTTGTTA+TGG | - | chr6_3:8116188-8116207 | None:intergenic | 35.0% |
| TCAAACCAAGTTCATGAACA+GGG | - | chr6_3:8116266-8116285 | None:intergenic | 35.0% | |
| TTCAAACCAAGTTCATGAAC+AGG | - | chr6_3:8116267-8116286 | None:intergenic | 35.0% | |
| TTATTAACAGAGGCTTGATG+AGG | + | chr6_3:8116382-8116401 | Msa0937050:CDS | 35.0% | |
| !! | AATTAAGATGCTGACGGATT+TGG | + | chr6_3:8116410-8116429 | Msa0937050:CDS | 35.0% |
| !! | ATTAAGATGCTGACGGATTT+GGG | + | chr6_3:8116411-8116430 | Msa0937050:CDS | 35.0% |
| ATTATCTGAAGAAAGCTGAG+AGG | + | chr6_3:8116538-8116557 | Msa0937050:CDS | 35.0% | |
| ! | GAGGCGTTTAAATGAAGAAA+TGG | + | chr6_3:8116557-8116576 | Msa0937050:CDS | 35.0% |
| ! | ACTTCTTTTATACGGGATAC+TGG | + | chr6_3:8116795-8116814 | Msa0937050:CDS | 35.0% |
| ! | AAGAAATGAACTCTGGAGAT+CGG | - | chr6_3:8116992-8117011 | None:intergenic | 35.0% |
| AAACTTCGTAGAGGGATAAA+AGG | + | chr6_3:8117026-8117045 | Msa0937050:CDS | 35.0% | |
| AACTTCGTAGAGGGATAAAA+GGG | + | chr6_3:8117027-8117046 | Msa0937050:CDS | 35.0% | |
| ! | ACAAAGTCATGATGCTTTTC+CGG | + | chr6_3:8117081-8117100 | Msa0937050:CDS | 35.0% |
| CTTAAGCTCAAAACAGAATG+TGG | + | chr6_3:8117209-8117228 | Msa0937050:CDS | 35.0% | |
| ! | TCAATTCACTTCTAAGTTGG+AGG | + | chr6_3:8117235-8117254 | Msa0937050:CDS | 35.0% |
| ! | CAATTCACTTCTAAGTTGGA+GGG | + | chr6_3:8117236-8117255 | Msa0937050:CDS | 35.0% |
| GACTTCTTATGATATGATGC+AGG | + | chr6_3:8117277-8117296 | Msa0937050:CDS | 35.0% | |
| TCAGATGGAAGATTACATTG+CGG | - | chr6_3:8117395-8117414 | None:intergenic | 35.0% | |
| ! | GTAATCTTCCATCTGAAATC+CGG | + | chr6_3:8117399-8117418 | Msa0937050:CDS | 35.0% |
| ! | TAATCTTCCATCTGAAATCC+GGG | + | chr6_3:8117400-8117419 | Msa0937050:CDS | 35.0% |
| !! | TATGGGGAATGCTGATTTAA+AGG | + | chr6_3:8117493-8117512 | Msa0937050:CDS | 35.0% |
| ! | GCTGATTTAAAGGCTACATT+TGG | + | chr6_3:8117503-8117522 | Msa0937050:CDS | 35.0% |
| ! | AAAGCATTAGTACACACATC+TGG | - | chr6_3:8117565-8117584 | None:intergenic | 35.0% |
| ! | TGCTTTTCAACAATGCTGAT+CGG | + | chr6_3:8117579-8117598 | Msa0937050:CDS | 35.0% |
| TATAGAAACTCGACAAAGAG+TGG | + | chr6_3:8117829-8117848 | Msa0937050:CDS | 35.0% | |
| TTGTGAGGGTAATGAAATCT+AGG | + | chr6_3:8117885-8117904 | Msa0937050:CDS | 35.0% | |
| !! | GTTTTTAGAGAGGGATAAAG+TGG | + | chr6_3:8118021-8118040 | Msa0937050:CDS | 35.0% |
| TACTGTTTCAAGCAAGATAG+CGG | - | chr6_3:8118060-8118079 | None:intergenic | 35.0% | |
| TTGCGCATAGTAAACAAACT+AGG | + | chr6_3:8118200-8118219 | Msa0937050:three_prime_UTR | 35.0% | |
| ! | GTAAACAAACTAGGCTTGTT+AGG | + | chr6_3:8118209-8118228 | Msa0937050:three_prime_UTR | 35.0% |
| CTAGGGTTTCATTTGGGAAA+TGG | - | chr6_3:8113666-8113685 | None:intergenic | 40.0% | |
| ! | GAAAACCCTAGAAGTGTGAA+TGG | - | chr6_3:8113701-8113720 | None:intergenic | 40.0% |
| CGTTGGAGAATTTGGGAAAA+CGG | - | chr6_3:8113739-8113758 | None:intergenic | 40.0% | |
| ! | TTATAAGCACCGTGTAGTTG+TGG | + | chr6_3:8113788-8113807 | Msa0937050:CDS | 40.0% |
| AGTTAGGATCCACAACTACA+CGG | - | chr6_3:8113800-8113819 | None:intergenic | 40.0% | |
| GAAATTATTGCCCAAGTTCG+AGG | + | chr6_3:8114208-8114227 | Msa0937050:intron | 40.0% | |
| ACGAGATTGACGATGTTGTA+TGG | + | chr6_3:8114260-8114279 | Msa0937050:intron | 40.0% | |
| TGTTGTATGGAACAGAGTGT+TGG | + | chr6_3:8114273-8114292 | Msa0937050:intron | 40.0% | |
| ! | GTTGTATGGAACAGAGTGTT+GGG | + | chr6_3:8114274-8114293 | Msa0937050:intron | 40.0% |
| CGAGAATAAAATGAGCGTAG+AGG | + | chr6_3:8114313-8114332 | Msa0937050:intron | 40.0% | |
| AGCACCCATAACAGAAAAGA+TGG | + | chr6_3:8114404-8114423 | Msa0937050:intron | 40.0% | |
| ACCCATAACAGAAAAGATGG+TGG | + | chr6_3:8114407-8114426 | Msa0937050:intron | 40.0% | |
| !! | AGATGGTGGAAAATAGGCTT+AGG | + | chr6_3:8114421-8114440 | Msa0937050:intron | 40.0% |
| ! | TTCAATCGTAGTGGAATTGG+AGG | + | chr6_3:8114576-8114595 | Msa0937050:intron | 40.0% |
| CTAAAACTTGCGGACAATTG+TGG | + | chr6_3:8115187-8115206 | Msa0937050:intron | 40.0% | |
| TAACTGTGGTTGCGACAATT+TGG | + | chr6_3:8115211-8115230 | Msa0937050:intron | 40.0% | |
| AAGTTACGTTTGGCTGTTTG+AGG | + | chr6_3:8115360-8115379 | Msa0937050:intron | 40.0% | |
| !!! | GCCTATTCTGTTTTGGTTGT+TGG | + | chr6_3:8115586-8115605 | Msa0937050:intron | 40.0% |
| TTGGCAAGTTTCATCTCGAT+AGG | + | chr6_3:8115609-8115628 | Msa0937050:intron | 40.0% | |
| AGTTTCATCTCGATAGGCAT+CGG | + | chr6_3:8115615-8115634 | Msa0937050:intron | 40.0% | |
| CTAAATGGCAAGTTTGATGG+AGG | - | chr6_3:8115831-8115850 | None:intergenic | 40.0% | |
| CGTGTTATAAAATAGGGCTG+TGG | + | chr6_3:8115887-8115906 | Msa0937050:intron | 40.0% | |
| TTTGGGGAGAAACTTTACTC+TGG | + | chr6_3:8116060-8116079 | Msa0937050:CDS | 40.0% | |
| TTGTCTCAGATGAGCAGTAA+CGG | - | chr6_3:8116097-8116116 | None:intergenic | 40.0% | |
| CAATCAATCAAAGCTGCTCA+AGG | + | chr6_3:8116123-8116142 | Msa0937050:CDS | 40.0% | |
| ! | TTTTCTTGGAGGAACTCAAC+AGG | + | chr6_3:8116151-8116170 | Msa0937050:CDS | 40.0% |
| CCATGTACATGAGTATGTCT+CGG | - | chr6_3:8116212-8116231 | None:intergenic | 40.0% | |
| ! | GTTCATGAACAGGGGTTTTA+CGG | - | chr6_3:8116257-8116276 | None:intergenic | 40.0% |
| AAAACCCCTGTTCATGAACT+TGG | + | chr6_3:8116258-8116277 | Msa0937050:CDS | 40.0% | |
| CAAACCAAGTTCATGAACAG+GGG | - | chr6_3:8116265-8116284 | None:intergenic | 40.0% | |
| TTGACCTTGTGCTTAAAGAG+AGG | + | chr6_3:8116349-8116368 | Msa0937050:CDS | 40.0% | |
| CATTCCTCTCTTTAAGCACA+AGG | - | chr6_3:8116356-8116375 | None:intergenic | 40.0% | |
| CTTGTGCTTAAAGAGAGGAA+TGG | + | chr6_3:8116354-8116373 | Msa0937050:CDS | 40.0% | |
| TGAGTCAGAGATAACTAGTG+TGG | + | chr6_3:8116611-8116630 | Msa0937050:CDS | 40.0% | |
| TATCCACACTCTCGTTCATA+TGG | + | chr6_3:8116659-8116678 | Msa0937050:CDS | 40.0% | |
| ACAGGATCTTTCAACCTTTC+AGG | - | chr6_3:8116840-8116859 | None:intergenic | 40.0% | |
| ! | AGAAATGAACTCTGGAGATC+GGG | - | chr6_3:8116991-8117010 | None:intergenic | 40.0% |
| TGGATGACAAACTTCGTAGA+GGG | + | chr6_3:8117018-8117037 | Msa0937050:CDS | 40.0% | |
| ACTTCGTAGAGGGATAAAAG+GGG | + | chr6_3:8117028-8117047 | Msa0937050:CDS | 40.0% | |
| ATAAGCAACACCTAGCAAAG+AGG | + | chr6_3:8117138-8117157 | Msa0937050:CDS | 40.0% | |
| ! | AATCTTCCATCTGAAATCCG+GGG | + | chr6_3:8117401-8117420 | Msa0937050:CDS | 40.0% |
| ATTGACGTGGCAAGCTAATA+TGG | + | chr6_3:8117475-8117494 | Msa0937050:CDS | 40.0% | |
| TTGACGTGGCAAGCTAATAT+GGG | + | chr6_3:8117476-8117495 | Msa0937050:CDS | 40.0% | |
| AAACATTCAGCTCATGCTTC+TGG | - | chr6_3:8117535-8117554 | None:intergenic | 40.0% | |
| ! | GATGACTTGTAAGGAGATAG+AGG | + | chr6_3:8117601-8117620 | Msa0937050:CDS | 40.0% |
| TCAGATATGTCCTTGCTCAT+TGG | - | chr6_3:8117713-8117732 | None:intergenic | 40.0% | |
| ATTCACTAGCAAGCTCTTCA+AGG | + | chr6_3:8117760-8117779 | Msa0937050:CDS | 40.0% | |
| TGAGGGTAATGAAATCTAGG+CGG | + | chr6_3:8117888-8117907 | Msa0937050:CDS | 40.0% | |
| ACATAATAATGTCATCGCCG+AGG | + | chr6_3:8117919-8117938 | Msa0937050:CDS | 40.0% | |
| TAAAAACTCGCGCTCAATGA+GGG | - | chr6_3:8118008-8118027 | None:intergenic | 40.0% | |
| TTGTTAGGGTCACTTCTGTT+TGG | + | chr6_3:8118224-8118243 | Msa0937050:three_prime_UTR | 40.0% | |
| AAATGAGCGTAGAGGAGATG+AGG | + | chr6_3:8114321-8114340 | Msa0937050:intron | 45.0% | |
| TGGTGGAAAATAGGCTTAGG+TGG | + | chr6_3:8114424-8114443 | Msa0937050:intron | 45.0% | |
| TGGAAAATAGGCTTAGGTGG+TGG | + | chr6_3:8114427-8114446 | Msa0937050:intron | 45.0% | |
| CAGACAAACACGCATTCGAT+CGG | - | chr6_3:8114902-8114921 | None:intergenic | 45.0% | |
| TACGACATACACTGGCACAT+GGG | - | chr6_3:8114981-8115000 | None:intergenic | 45.0% | |
| ATACGACATACACTGGCACA+TGG | - | chr6_3:8114982-8115001 | None:intergenic | 45.0% | |
| ACATGGGATACGACATACAC+TGG | - | chr6_3:8114989-8115008 | None:intergenic | 45.0% | |
| TATCCCATGTTCGTGTATCG+TGG | + | chr6_3:8114999-8115018 | Msa0937050:intron | 45.0% | |
| !!! | TGAAGGTAGTTTTGGTGCAG+TGG | + | chr6_3:8115046-8115065 | Msa0937050:intron | 45.0% |
| GCTCTCACAATGGAAGACTT+AGG | - | chr6_3:8115125-8115144 | None:intergenic | 45.0% | |
| TGCATGAGCAAGCAACAATC+CGG | - | chr6_3:8115309-8115328 | None:intergenic | 45.0% | |
| GAAGTGGGTAGACCATAACA+AGG | + | chr6_3:8116173-8116192 | Msa0937050:CDS | 45.0% | |
| CCGAGACATACTCATGTACA+TGG | + | chr6_3:8116209-8116228 | Msa0937050:CDS | 45.0% | |
| AAGGCTTCTCAAAGTCAGTC+TGG | - | chr6_3:8116449-8116468 | None:intergenic | 45.0% | |
| !! | GGAGAGAGTATCTCACTACT+TGG | + | chr6_3:8116578-8116597 | Msa0937050:CDS | 45.0% |
| GTCAGAGATAACTAGTGTGG+TGG | + | chr6_3:8116614-8116633 | Msa0937050:CDS | 45.0% | |
| TCTCCATATGAACGAGAGTG+TGG | - | chr6_3:8116665-8116684 | None:intergenic | 45.0% | |
| CTCGTTCATATGGAGAACTC+AGG | + | chr6_3:8116669-8116688 | Msa0937050:CDS | 45.0% | |
| ! | TTGTTTCGTAGGGTACCTTC+TGG | + | chr6_3:8116747-8116766 | Msa0937050:CDS | 45.0% |
| ! | TGTTTCGTAGGGTACCTTCT+GGG | + | chr6_3:8116748-8116767 | Msa0937050:CDS | 45.0% |
| TTAATCGTTGTGAGCCCAGA+AGG | - | chr6_3:8116765-8116784 | None:intergenic | 45.0% | |
| ! | CGATTTTGTGCAGCGTCTTT+TGG | + | chr6_3:8116860-8116879 | Msa0937050:CDS | 45.0% |
| ! | GCAGCGTCTTTTGGATTTGA+AGG | + | chr6_3:8116869-8116888 | Msa0937050:CDS | 45.0% |
| GTGGATGACAAACTTCGTAG+AGG | + | chr6_3:8117017-8117036 | Msa0937050:CDS | 45.0% | |
| CAAACACATCCTTCTCTTGC+AGG | - | chr6_3:8117109-8117128 | None:intergenic | 45.0% | |
| CCTAGCAAAGAGGCTTCTTT+CGG | + | chr6_3:8117148-8117167 | Msa0937050:CDS | 45.0% | |
| CTAGCAAAGAGGCTTCTTTC+GGG | + | chr6_3:8117149-8117168 | Msa0937050:CDS | 45.0% | |
| TAGCAAAGAGGCTTCTTTCG+GGG | + | chr6_3:8117150-8117169 | Msa0937050:CDS | 45.0% | |
| ATGAACCTGTTGTAAGCACC+TGG | - | chr6_3:8117355-8117374 | None:intergenic | 45.0% | |
| AGGTGCTTACAACAGGTTCA+TGG | + | chr6_3:8117354-8117373 | Msa0937050:CDS | 45.0% | |
| GGAAGATTACATTGCGGACT+AGG | - | chr6_3:8117389-8117408 | None:intergenic | 45.0% | |
| GAAACTTCTCACATAGACCC+CGG | - | chr6_3:8117421-8117440 | None:intergenic | 45.0% | |
| TGACGTGGCAAGCTAATATG+GGG | + | chr6_3:8117477-8117496 | Msa0937050:CDS | 45.0% | |
| ! | TGCTGATCGGATGACTTGTA+AGG | + | chr6_3:8117592-8117611 | Msa0937050:CDS | 45.0% |
| GACTTGTAAGGAGATAGAGG+AGG | + | chr6_3:8117604-8117623 | Msa0937050:CDS | 45.0% | |
| TACCCATGTCAGACTTGAAG+AGG | + | chr6_3:8117636-8117655 | Msa0937050:CDS | 45.0% | |
| CACCTCTTCAAGTCTGACAT+GGG | - | chr6_3:8117641-8117660 | None:intergenic | 45.0% | |
| !! | AGTCGTTGGCCTTAGTCAAA+GGG | + | chr6_3:8117666-8117685 | Msa0937050:CDS | 45.0% |
| TAGGGACTGTTGTTGCACAA+AGG | + | chr6_3:8117789-8117808 | Msa0937050:CDS | 45.0% | |
| AGGGACTGTTGTTGCACAAA+GGG | + | chr6_3:8117790-8117809 | Msa0937050:CDS | 45.0% | |
| AGAAACTCGACAAAGAGTGG+AGG | + | chr6_3:8117832-8117851 | Msa0937050:CDS | 45.0% | |
| ACAATTGCTGCCTCAATCTG+CGG | - | chr6_3:8117869-8117888 | None:intergenic | 45.0% | |
| AGATTGAGGCAGCAATTGTG+AGG | + | chr6_3:8117870-8117889 | Msa0937050:CDS | 45.0% | |
| GATTGAGGCAGCAATTGTGA+GGG | + | chr6_3:8117871-8117890 | Msa0937050:CDS | 45.0% | |
| GAGGGTAATGAAATCTAGGC+GGG | + | chr6_3:8117889-8117908 | Msa0937050:CDS | 45.0% | |
| CTAAAAACTCGCGCTCAATG+AGG | - | chr6_3:8118009-8118028 | None:intergenic | 45.0% | |
| !! | TTGAGCGCGAGTTTTTAGAG+AGG | + | chr6_3:8118011-8118030 | Msa0937050:CDS | 45.0% |
| !! | TGAGCGCGAGTTTTTAGAGA+GGG | + | chr6_3:8118012-8118031 | Msa0937050:CDS | 45.0% |
| !! | GTATGGAACAGAGTGTTGGG+TGG | + | chr6_3:8114277-8114296 | Msa0937050:intron | 50.0% |
| AGGAGATGAGGATGTTGCGT+TGG | + | chr6_3:8114333-8114352 | Msa0937050:intron | 50.0% | |
| GATGCGTGGTTAGGCTAGAT+TGG | + | chr6_3:8114355-8114374 | Msa0937050:intron | 50.0% | |
| CGATCGAATGCGTGTTTGTC+TGG | + | chr6_3:8114900-8114919 | Msa0937050:intron | 50.0% | |
| GGACCACGATACACGAACAT+GGG | - | chr6_3:8115005-8115024 | None:intergenic | 50.0% | |
| TGGACCACGATACACGAACA+TGG | - | chr6_3:8115006-8115025 | None:intergenic | 50.0% | |
| !!! | GGTAGTTTTGGTGCAGTGGA+TGG | + | chr6_3:8115050-8115069 | Msa0937050:intron | 50.0% |
| ! | GTTGCTGTTGTGTGACTTCG+AGG | + | chr6_3:8115074-8115093 | Msa0937050:intron | 50.0% |
| TTGTGTGACTTCGAGGTCGT+TGG | + | chr6_3:8115081-8115100 | Msa0937050:intron | 50.0% | |
| CGGACAATTGTGGCTAACTG+TGG | + | chr6_3:8115197-8115216 | Msa0937050:intron | 50.0% | |
| CCATGCTTTACGGATCACAC+CGG | + | chr6_3:8115287-8115306 | Msa0937050:intron | 50.0% | |
| !! | TTCATCTCGATAGGCATCGG+TGG | + | chr6_3:8115618-8115637 | Msa0937050:intron | 50.0% |
| TGGAGGAACTCAACAGGAAG+TGG | + | chr6_3:8116157-8116176 | Msa0937050:CDS | 50.0% | |
| GGAGGAACTCAACAGGAAGT+GGG | + | chr6_3:8116158-8116177 | Msa0937050:CDS | 50.0% | |
| ! | ACAGGGGTTTTACGGTTGCT+TGG | - | chr6_3:8116249-8116268 | None:intergenic | 50.0% |
| AGACGCTGCACAAAATCGAC+AGG | - | chr6_3:8116858-8116877 | None:intergenic | 50.0% | |
| CGTAGAGGGATAAAAGGGGT+TGG | + | chr6_3:8117032-8117051 | Msa0937050:CDS | 50.0% | |
| !! | AGGGATAAAAGGGGTTGGTG+AGG | + | chr6_3:8117037-8117056 | Msa0937050:CDS | 50.0% |
| !! | GATAAAAGGGGTTGGTGAGG+AGG | + | chr6_3:8117040-8117059 | Msa0937050:CDS | 50.0% |
| TTTCCGGTACCTGCAAGAGA+AGG | + | chr6_3:8117097-8117116 | Msa0937050:CDS | 50.0% | |
| CATCCTTCTCTTGCAGGTAC+CGG | - | chr6_3:8117103-8117122 | None:intergenic | 50.0% | |
| CCGAAAGAAGCCTCTTTGCT+AGG | - | chr6_3:8117151-8117170 | None:intergenic | 50.0% | |
| GGGGAAGACTGTATCAGATG+AGG | + | chr6_3:8117169-8117188 | Msa0937050:CDS | 50.0% | |
| CAGGGTTTCTTAGCAGCTCA+TGG | + | chr6_3:8117296-8117315 | Msa0937050:CDS | 50.0% | |
| TAGCCCTACACTATCTGTCC+AGG | + | chr6_3:8117334-8117353 | Msa0937050:CDS | 50.0% | |
| GCACCTGGACAGATAGTGTA+GGG | - | chr6_3:8117340-8117359 | None:intergenic | 50.0% | |
| AGCACCTGGACAGATAGTGT+AGG | - | chr6_3:8117341-8117360 | None:intergenic | 50.0% | |
| TCTGTCCAGGTGCTTACAAC+AGG | + | chr6_3:8117347-8117366 | Msa0937050:CDS | 50.0% | |
| !! | CATTGCGGACTAGGTTGAGT+TGG | - | chr6_3:8117380-8117399 | None:intergenic | 50.0% |
| CATAGACCCCGGATTTCAGA+TGG | - | chr6_3:8117410-8117429 | None:intergenic | 50.0% | |
| TATTATCTCGGCGCTCACAG+TGG | + | chr6_3:8117446-8117465 | Msa0937050:CDS | 50.0% | |
| ACAGTGGTAGGAGATTGACG+TGG | + | chr6_3:8117462-8117481 | Msa0937050:CDS | 50.0% | |
| GCACCTCTTCAAGTCTGACA+TGG | - | chr6_3:8117642-8117661 | None:intergenic | 50.0% | |
| TGACTAAGGCCAACGACTGA+AGG | - | chr6_3:8117664-8117683 | None:intergenic | 50.0% | |
| !! | CAGTCGTTGGCCTTAGTCAA+AGG | + | chr6_3:8117665-8117684 | Msa0937050:CDS | 50.0% |
| TCGGAAAGAGCCAATGAGCA+AGG | + | chr6_3:8117700-8117719 | Msa0937050:CDS | 50.0% | |
| AGACAGAAAGCCGCAGATTG+AGG | + | chr6_3:8117856-8117875 | Msa0937050:CDS | 50.0% | |
| AGGATGTTGCGTTGGATGCG+TGG | + | chr6_3:8114341-8114360 | Msa0937050:intron | 55.0% | |
| GTTGCGTTGGATGCGTGGTT+AGG | + | chr6_3:8114346-8114365 | Msa0937050:intron | 55.0% | |
| CCGGTGTGATCCGTAAAGCA+TGG | - | chr6_3:8115290-8115309 | None:intergenic | 55.0% | |
| ! | AGCAGCTCATGGTGCTGAGT+TGG | + | chr6_3:8117307-8117326 | Msa0937050:CDS | 55.0% |
| ! | GCAGCTCATGGTGCTGAGTT+GGG | + | chr6_3:8117308-8117327 | Msa0937050:CDS | 55.0% |
| !! | GAAGAGGTGCCTTCAGTCGT+TGG | + | chr6_3:8117652-8117671 | Msa0937050:CDS | 55.0% |
| ATCTCGGCGCTCACAGTGGT+AGG | + | chr6_3:8117450-8117469 | Msa0937050:CDS | 60.0% | |
| CTGCAGCTGCTTCGTGACCT+CGG | - | chr6_3:8117939-8117958 | None:intergenic | 60.0% | |
| CGAGGTCACGAAGCAGCTGC+AGG | + | chr6_3:8117937-8117956 | Msa0937050:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 8113636 | 8118406 | 8113636 | ID=Msa0937050;Name=Msa0937050 |
| chr6_3 | mRNA | 8113636 | 8118406 | 8113636 | ID=Msa0937050-mRNA-1;Parent=Msa0937050;Name=Msa0937050-mRNA-1;_AED=0.01;_eAED=0.01;_QI=123|1|1|1|1|1|2|334|730 |
| chr6_3 | exon | 8113636 | 8113910 | 8113636 | ID=Msa0937050-mRNA-1:exon:2646;Parent=Msa0937050-mRNA-1 |
| chr6_3 | exon | 8116032 | 8118406 | 8116032 | ID=Msa0937050-mRNA-1:exon:2647;Parent=Msa0937050-mRNA-1 |
| chr6_3 | five_prime_UTR | 8113636 | 8113758 | 8113636 | ID=Msa0937050-mRNA-1:five_prime_utr;Parent=Msa0937050-mRNA-1 |
| chr6_3 | CDS | 8113759 | 8113910 | 8113759 | ID=Msa0937050-mRNA-1:cds;Parent=Msa0937050-mRNA-1 |
| chr6_3 | CDS | 8116032 | 8118072 | 8116032 | ID=Msa0937050-mRNA-1:cds;Parent=Msa0937050-mRNA-1 |
| chr6_3 | three_prime_UTR | 8118073 | 8118406 | 8118073 | ID=Msa0937050-mRNA-1:three_prime_utr;Parent=Msa0937050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
