Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707220 | XP_013447233.2 | 69.828 | 116 | 1 | 1 | 300 | 381 | 367 | 482 | 3.36e-37 | 151 |
| Msa0707220 | XP_013447233.2 | 90.184 | 326 | 23 | 1 | 1 | 317 | 1 | 326 | 0.0 | 594 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707220 | sp|P23902|KASC1_HORVU | 53.428 | 423 | 94 | 5 | 62 | 381 | 40 | 462 | 3.93e-144 | 419 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707220 | A0A072U5Z3 | 68.966 | 116 | 2 | 1 | 300 | 381 | 367 | 482 | 6.35e-37 | 149 |
| Msa0707220 | A0A072U5Z3 | 90.184 | 326 | 23 | 1 | 1 | 317 | 1 | 326 | 0.0 | 594 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa0707220 | 0.823048 | 1.708157e-53 | -8.615850e-47 |
| Msa0005050 | Msa0707220 | 0.842646 | 2.277029e-58 | -8.615850e-47 |
| Msa0006980 | Msa0707220 | 0.803300 | 3.722727e-49 | -8.615850e-47 |
| Msa0010560 | Msa0707220 | 0.804232 | 2.384094e-49 | -8.615850e-47 |
| Msa0012440 | Msa0707220 | 0.811926 | 5.481818e-51 | -8.615850e-47 |
| Msa0016120 | Msa0707220 | 0.832500 | 9.122877e-56 | -8.615850e-47 |
| Msa0018220 | Msa0707220 | 0.803148 | 4.003485e-49 | -8.615850e-47 |
| Msa0019600 | Msa0707220 | 0.826324 | 2.888550e-54 | -8.615850e-47 |
| Msa0032840 | Msa0707220 | -0.812676 | 3.760485e-51 | -8.615850e-47 |
| Msa0036430 | Msa0707220 | 0.832215 | 1.073258e-55 | -8.615850e-47 |
| Msa0044020 | Msa0707220 | 0.802294 | 6.005379e-49 | -8.615850e-47 |
| Msa0048200 | Msa0707220 | 0.800650 | 1.304625e-48 | -8.615850e-47 |
| Msa0050040 | Msa0707220 | 0.842831 | 2.033815e-58 | -8.615850e-47 |
| Msa0053110 | Msa0707220 | 0.850087 | 2.130611e-60 | -8.615850e-47 |
| Msa0057240 | Msa0707220 | 0.821366 | 4.196064e-53 | -8.615850e-47 |
| Msa0084500 | Msa0707220 | 0.839264 | 1.757777e-57 | -8.615850e-47 |
| Msa0097050 | Msa0707220 | 0.803498 | 3.386968e-49 | -8.615850e-47 |
| Msa0098440 | Msa0707220 | 0.850325 | 1.826241e-60 | -8.615850e-47 |
| Msa0101300 | Msa0707220 | 0.800704 | 1.271878e-48 | -8.615850e-47 |
| Msa0102990 | Msa0707220 | 0.842715 | 2.182943e-58 | -8.615850e-47 |
| Msa0103000 | Msa0707220 | 0.800815 | 1.207199e-48 | -8.615850e-47 |
| Msa0106790 | Msa0707220 | 0.828044 | 1.118771e-54 | -8.615850e-47 |
| Msa0109880 | Msa0707220 | 0.809116 | 2.218593e-50 | -8.615850e-47 |
| Msa0110970 | Msa0707220 | 0.824688 | 7.049360e-54 | -8.615850e-47 |
| Msa0111750 | Msa0707220 | 0.815292 | 9.963905e-52 | -8.615850e-47 |
| Msa0114540 | Msa0707220 | -0.818332 | 2.071480e-52 | -8.615850e-47 |
| Msa0118400 | Msa0707220 | 0.805264 | 1.452091e-49 | -8.615850e-47 |
| Msa0619980 | Msa0707220 | 0.818174 | 2.249294e-52 | -8.615850e-47 |
| Msa0620240 | Msa0707220 | 0.806819 | 6.834380e-50 | -8.615850e-47 |
| Msa0620260 | Msa0707220 | 0.808388 | 3.174684e-50 | -8.615850e-47 |
| Msa0625890 | Msa0707220 | 0.826172 | 3.138409e-54 | -8.615850e-47 |
| Msa0641250 | Msa0707220 | 0.829508 | 4.950380e-55 | -8.615850e-47 |
| Msa0645050 | Msa0707220 | 0.807392 | 5.170675e-50 | -8.615850e-47 |
| Msa0663590 | Msa0707220 | 0.819772 | 9.744015e-53 | -8.615850e-47 |
| Msa0663680 | Msa0707220 | 0.848368 | 6.407167e-60 | -8.615850e-47 |
| Msa0669840 | Msa0707220 | 0.850565 | 1.564097e-60 | -8.615850e-47 |
| Msa0678890 | Msa0707220 | 0.817184 | 3.761682e-52 | -8.615850e-47 |
| Msa0680150 | Msa0707220 | 0.852086 | 5.812940e-61 | -8.615850e-47 |
| Msa0682530 | Msa0707220 | 0.820951 | 5.228384e-53 | -8.615850e-47 |
| Msa0685330 | Msa0707220 | 0.846785 | 1.746682e-59 | -8.615850e-47 |
| Msa0688500 | Msa0707220 | 0.846662 | 1.886903e-59 | -8.615850e-47 |
| Msa0691160 | Msa0707220 | 0.823681 | 1.215198e-53 | -8.615850e-47 |
| Msa0707220 | Msa0709450 | 0.805274 | 1.444594e-49 | -8.615850e-47 |
| Msa0707220 | Msa0716800 | 0.819628 | 1.051057e-52 | -8.615850e-47 |
| Msa0707220 | Msa0720040 | 0.816655 | 4.943457e-52 | -8.615850e-47 |
| Msa0707220 | Msa0722940 | 0.821935 | 3.098275e-53 | -8.615850e-47 |
| Msa0707220 | Msa0723150 | 0.816431 | 5.550052e-52 | -8.615850e-47 |
| Msa0707220 | Msa0737190 | 0.801872 | 7.334109e-49 | -8.615850e-47 |
| Msa0707220 | Msa0739580 | 0.809224 | 2.103242e-50 | -8.615850e-47 |
| Msa0707220 | Msa0741900 | 0.839372 | 1.648239e-57 | -8.615850e-47 |
| Msa0707220 | Msa0747780 | 0.849631 | 2.856158e-60 | -8.615850e-47 |
| Msa0707220 | Msa0752840 | 0.831799 | 1.359787e-55 | -8.615850e-47 |
| Msa0707220 | Msa0754030 | 0.815464 | 9.124265e-52 | -8.615850e-47 |
| Msa0707220 | Msa0757870 | 0.831273 | 1.832601e-55 | -8.615850e-47 |
| Msa0707220 | Msa0761580 | 0.837804 | 4.188378e-57 | -8.615850e-47 |
| Msa0707220 | Msa0764820 | 0.840465 | 8.556738e-58 | -8.615850e-47 |
| Msa0707220 | Msa0799210 | 0.802297 | 5.997556e-49 | -8.615850e-47 |
| Msa0707220 | Msa0802840 | 0.807290 | 5.432625e-50 | -8.615850e-47 |
| Msa0707220 | Msa0807110 | 0.829894 | 3.986542e-55 | -8.615850e-47 |
| Msa0707220 | Msa0810020 | 0.807949 | 3.937368e-50 | -8.615850e-47 |
| Msa0707220 | Msa0816450 | 0.805878 | 1.079175e-49 | -8.615850e-47 |
| Msa0707220 | Msa0822990 | 0.837035 | 6.592656e-57 | -8.615850e-47 |
| Msa0707220 | Msa0823400 | 0.827170 | 1.813297e-54 | -8.615850e-47 |
| Msa0707220 | Msa0833040 | 0.823265 | 1.520407e-53 | -8.615850e-47 |
| Msa0707220 | Msa0840500 | 0.815892 | 7.322996e-52 | -8.615850e-47 |
| Msa0707220 | Msa0841320 | 0.813229 | 2.844671e-51 | -8.615850e-47 |
| Msa0707220 | Msa0843640 | 0.811401 | 7.132186e-51 | -8.615850e-47 |
| Msa0707220 | Msa0844560 | 0.810645 | 1.039892e-50 | -8.615850e-47 |
| Msa0707220 | Msa0849280 | 0.805792 | 1.125021e-49 | -8.615850e-47 |
| Msa0707220 | Msa0850500 | 0.811728 | 6.055530e-51 | -8.615850e-47 |
| Msa0707220 | Msa0851020 | 0.804857 | 1.766442e-49 | -8.615850e-47 |
| Msa0707220 | Msa0862100 | 0.839934 | 1.177302e-57 | -8.615850e-47 |
| Msa0707220 | Msa0867350 | 0.880475 | 5.324131e-70 | -8.615850e-47 |
| Msa0707220 | Msa0872310 | 0.846251 | 2.442885e-59 | -8.615850e-47 |
| Msa0707220 | Msa0873190 | 0.851702 | 7.469826e-61 | -8.615850e-47 |
| Msa0707220 | Msa0876690 | 0.815434 | 9.262696e-52 | -8.615850e-47 |
| Msa0707220 | Msa0880440 | 0.806763 | 7.023287e-50 | -8.615850e-47 |
| Msa0707220 | Msa0885060 | 0.882399 | 1.076218e-70 | -8.615850e-47 |
| Msa0707220 | Msa0896970 | 0.808885 | 2.485595e-50 | -8.615850e-47 |
| Msa0707220 | Msa0898730 | 0.871340 | 7.363785e-67 | -8.615850e-47 |
| Msa0707220 | Msa0905550 | 0.853969 | 1.680650e-61 | -8.615850e-47 |
| Msa0707220 | Msa0906370 | 0.821280 | 4.391778e-53 | -8.615850e-47 |
| Msa0707220 | Msa0911990 | 0.849147 | 3.897413e-60 | -8.615850e-47 |
| Msa0707220 | Msa0918800 | 0.806808 | 6.871422e-50 | -8.615850e-47 |
| Msa0707220 | Msa0929870 | 0.819619 | 1.055840e-52 | -8.615850e-47 |
| Msa0707220 | Msa0936410 | 0.800457 | 1.428185e-48 | -8.615850e-47 |
| Msa0707220 | Msa0937550 | 0.848188 | 7.184741e-60 | -8.615850e-47 |
| Msa0707220 | Msa0938430 | 0.855206 | 7.367800e-62 | -8.615850e-47 |
| Msa0707220 | Msa0941960 | 0.822912 | 1.838033e-53 | -8.615850e-47 |
| Msa0707220 | Msa0961560 | 0.811655 | 6.279612e-51 | -8.615850e-47 |
| Msa0707220 | Msa0973250 | 0.801309 | 9.567965e-49 | -8.615850e-47 |
| Msa0707220 | Msa0974750 | 0.836397 | 9.586563e-57 | -8.615850e-47 |
| Msa0707220 | Msa0975580 | 0.856008 | 4.301047e-62 | -8.615850e-47 |
| Msa0707220 | Msa0979510 | 0.802892 | 4.521574e-49 | -8.615850e-47 |
| Msa0707220 | Msa0996270 | 0.809871 | 1.527213e-50 | -8.615850e-47 |
| Msa0707220 | Msa0999300 | 0.810115 | 1.353043e-50 | -8.615850e-47 |
| Msa0707220 | Msa0999360 | 0.803630 | 3.181167e-49 | -8.615850e-47 |
| Msa0707220 | Msa1007350 | 0.804196 | 2.425925e-49 | -8.615850e-47 |
| Msa0707220 | Msa1007870 | 0.800772 | 1.231871e-48 | -8.615850e-47 |
| Msa0707220 | Msa1014270 | 0.817519 | 3.162212e-52 | -8.615850e-47 |
| Msa0707220 | Msa1032450 | 0.850942 | 1.224803e-60 | -8.615850e-47 |
| Msa0707220 | Msa1033560 | 0.833831 | 4.253981e-56 | -8.615850e-47 |
| Msa0707220 | Msa1037890 | 0.818346 | 2.056528e-52 | -8.615850e-47 |
| Msa0707220 | Msa1037900 | 0.848793 | 4.887256e-60 | -8.615850e-47 |
| Msa0707220 | Msa1037910 | 0.822045 | 2.922743e-53 | -8.615850e-47 |
| Msa0707220 | Msa1037920 | 0.823297 | 1.494444e-53 | -8.615850e-47 |
| Msa0707220 | Msa1041530 | 0.871074 | 9.011124e-67 | -8.615850e-47 |
| Msa0707220 | Msa1042670 | 0.844346 | 8.003542e-59 | -8.615850e-47 |
| Msa0707220 | Msa1045780 | 0.841318 | 5.110443e-58 | -8.615850e-47 |
| Msa0707220 | Msa1055260 | 0.821841 | 3.257405e-53 | -8.615850e-47 |
| Msa0707220 | Msa1055280 | 0.820177 | 7.870910e-53 | -8.615850e-47 |
| Msa0707220 | Msa1055500 | 0.800225 | 1.592772e-48 | -8.615850e-47 |
| Msa0707220 | Msa1073340 | 0.833744 | 4.472644e-56 | -8.615850e-47 |
| Msa0707220 | Msa1081570 | 0.874433 | 6.777939e-68 | -8.615850e-47 |
| Msa0707220 | Msa1084520 | 0.802841 | 4.632707e-49 | -8.615850e-47 |
| Msa0707220 | Msa1113850 | 0.825890 | 3.662718e-54 | -8.615850e-47 |
| Msa0707220 | Msa1123880 | 0.850738 | 1.397946e-60 | -8.615850e-47 |
| Msa0707220 | Msa1127140 | 0.874546 | 6.206312e-68 | -8.615850e-47 |
| Msa0707220 | Msa1129950 | 0.803587 | 3.246332e-49 | -8.615850e-47 |
| Msa0707220 | Msa1129960 | 0.852716 | 3.846577e-61 | -8.615850e-47 |
| Msa0707220 | Msa1129970 | 0.835268 | 1.852245e-56 | -8.615850e-47 |
| Msa0707220 | Msa1129980 | 0.828368 | 9.348191e-55 | -8.615850e-47 |
| Msa0707220 | Msa1130010 | 0.832771 | 7.815166e-56 | -8.615850e-47 |
| Msa0707220 | Msa1130760 | 0.821149 | 4.706453e-53 | -8.615850e-47 |
| Msa0707220 | Msa1133000 | 0.806997 | 6.266963e-50 | -8.615850e-47 |
| Msa0707220 | Msa1136230 | 0.811169 | 8.009361e-51 | -8.615850e-47 |
| Msa0707220 | Msa1139810 | 0.826168 | 3.145847e-54 | -8.615850e-47 |
| Msa0707220 | Msa1145020 | 0.864765 | 9.608742e-65 | -8.615850e-47 |
| Msa0707220 | Msa1160400 | 0.830106 | 3.539953e-55 | -8.615850e-47 |
| Msa0707220 | Msa1166400 | 0.868905 | 4.612985e-66 | -8.615850e-47 |
| Msa0707220 | Msa1169710 | 0.806130 | 9.552064e-50 | -8.615850e-47 |
| Msa0707220 | Msa1169990 | 0.850136 | 2.063923e-60 | -8.615850e-47 |
| Msa0707220 | Msa1171310 | 0.803709 | 3.062923e-49 | -8.615850e-47 |
| Msa0707220 | Msa1176160 | 0.810463 | 1.138271e-50 | -8.615850e-47 |
| Msa0707220 | Msa1179280 | 0.824718 | 6.936473e-54 | -8.615850e-47 |
| Msa0707220 | Msa1200440 | 0.819250 | 1.281700e-52 | -8.615850e-47 |
| Msa0707220 | Msa1201110 | 0.845370 | 4.236493e-59 | -8.615850e-47 |
| Msa0707220 | Msa1201160 | 0.836587 | 8.576416e-57 | -8.615850e-47 |
| Msa0707220 | Msa1211090 | 0.801850 | 7.411484e-49 | -8.615850e-47 |
| Msa0707220 | Msa1221560 | 0.803106 | 4.084245e-49 | -8.615850e-47 |
| Msa0707220 | Msa1228190 | 0.809332 | 1.993445e-50 | -8.615850e-47 |
| Msa0707220 | Msa1228610 | 0.833633 | 4.766407e-56 | -8.615850e-47 |
| Msa0707220 | Msa1233560 | 0.853130 | 2.927755e-61 | -8.615850e-47 |
| Msa0707220 | Msa1248040 | 0.804552 | 2.045360e-49 | -8.615850e-47 |
| Msa0707220 | Msa1271260 | 0.811325 | 7.409552e-51 | -8.615850e-47 |
| Msa0707220 | Msa1272330 | 0.810974 | 8.826212e-51 | -8.615850e-47 |
| Msa0707220 | Msa1285900 | 0.819662 | 1.032666e-52 | -8.615850e-47 |
| Msa0707220 | Msa1294290 | 0.819148 | 1.352185e-52 | -8.615850e-47 |
| Msa0707220 | Msa1305510 | 0.852588 | 4.184520e-61 | -8.615850e-47 |
| Msa0707220 | Msa1307190 | 0.800579 | 1.349024e-48 | -8.615850e-47 |
| Msa0707220 | Msa1313970 | 0.820687 | 6.013592e-53 | -8.615850e-47 |
| Msa0707220 | Msa1321000 | 0.811219 | 7.809234e-51 | -8.615850e-47 |
| Msa0707220 | Msa1340670 | 0.816512 | 5.322798e-52 | -8.615850e-47 |
| Msa0707220 | Msa1348400 | 0.805540 | 1.270733e-49 | -8.615850e-47 |
| Msa0707220 | Msa1355400 | 0.864208 | 1.434051e-64 | -8.615850e-47 |
| Msa0707220 | Msa1365200 | 0.803248 | 3.817114e-49 | -8.615850e-47 |
| Msa0707220 | Msa1374550 | 0.800784 | 1.225039e-48 | -8.615850e-47 |
| Msa0707220 | Msa1378770 | 0.834294 | 3.257927e-56 | -8.615850e-47 |
| Msa0707220 | Msa1379990 | 0.826989 | 2.003441e-54 | -8.615850e-47 |
| Msa0707220 | Msa1406780 | 0.815388 | 9.482073e-52 | -8.615850e-47 |
| Msa0707220 | Msa1408870 | 0.830818 | 2.369808e-55 | -8.615850e-47 |
| Msa0707220 | Msa1414930 | 0.831169 | 1.943370e-55 | -8.615850e-47 |
| Msa0707220 | Msa1417960 | 0.809661 | 1.694796e-50 | -8.615850e-47 |
| Msa0707220 | Msa1420060 | 0.897000 | 2.147690e-76 | -8.615850e-47 |
| Msa0707220 | Msa1421550 | 0.847914 | 8.552569e-60 | -8.615850e-47 |
| Msa0707220 | Msa1424690 | 0.820113 | 8.140371e-53 | -8.615850e-47 |
| Msa0707220 | Msa1429420 | 0.821828 | 3.281459e-53 | -8.615850e-47 |
| Msa0707220 | Msa1431850 | 0.810953 | 8.918966e-51 | -8.615850e-47 |
| Msa0707220 | Msa1435480 | 0.815679 | 8.169822e-52 | -8.615850e-47 |
| Msa0707220 | Msa1437710 | 0.807637 | 4.585795e-50 | -8.615850e-47 |
| Msa0707220 | Msa1445790 | 0.800971 | 1.122099e-48 | -8.615850e-47 |
| Msa0707220 | Msa1455590 | 0.808031 | 3.781046e-50 | -8.615850e-47 |
| Msa0707220 | Msa1461060 | 0.806914 | 6.525228e-50 | -8.615850e-47 |
| Msa0130010 | Msa0707220 | 0.805453 | 1.324991e-49 | -8.615850e-47 |
| Msa0130570 | Msa0707220 | 0.829539 | 4.865171e-55 | -8.615850e-47 |
| Msa0134130 | Msa0707220 | 0.814896 | 1.219553e-51 | -8.615850e-47 |
| Msa0139900 | Msa0707220 | 0.810729 | 9.974986e-51 | -8.615850e-47 |
| Msa0141600 | Msa0707220 | 0.839266 | 1.755939e-57 | -8.615850e-47 |
| Msa0147560 | Msa0707220 | 0.821293 | 4.361006e-53 | -8.615850e-47 |
| Msa0147600 | Msa0707220 | 0.813862 | 2.064437e-51 | -8.615850e-47 |
| Msa0149140 | Msa0707220 | 0.824706 | 6.981418e-54 | -8.615850e-47 |
| Msa0149560 | Msa0707220 | 0.825657 | 4.159847e-54 | -8.615850e-47 |
| Msa0153420 | Msa0707220 | 0.838786 | 2.337935e-57 | -8.615850e-47 |
| Msa0161100 | Msa0707220 | 0.805054 | 1.606581e-49 | -8.615850e-47 |
| Msa0161200 | Msa0707220 | 0.826840 | 2.174743e-54 | -8.615850e-47 |
| Msa0161680 | Msa0707220 | 0.801538 | 8.590502e-49 | -8.615850e-47 |
| Msa0176470 | Msa0707220 | 0.836542 | 8.803893e-57 | -8.615850e-47 |
| Msa0184990 | Msa0707220 | 0.802918 | 4.465232e-49 | -8.615850e-47 |
| Msa0200970 | Msa0707220 | 0.801474 | 8.854342e-49 | -8.615850e-47 |
| Msa0203010 | Msa0707220 | 0.828781 | 7.427496e-55 | -8.615850e-47 |
| Msa0203020 | Msa0707220 | 0.803459 | 3.451075e-49 | -8.615850e-47 |
| Msa0203030 | Msa0707220 | 0.883594 | 3.930874e-71 | -8.615850e-47 |
| Msa0203160 | Msa0707220 | 0.832817 | 7.614406e-56 | -8.615850e-47 |
| Msa0219190 | Msa0707220 | 0.888896 | 3.929912e-73 | -8.615850e-47 |
| Msa0219310 | Msa0707220 | 0.804547 | 2.050305e-49 | -8.615850e-47 |
| Msa0220420 | Msa0707220 | 0.813123 | 3.000980e-51 | -8.615850e-47 |
| Msa0230550 | Msa0707220 | -0.816667 | 4.914467e-52 | -8.615850e-47 |
| Msa0235890 | Msa0707220 | 0.801377 | 9.265438e-49 | -8.615850e-47 |
| Msa0369570 | Msa0707220 | 0.800268 | 1.560838e-48 | -8.615850e-47 |
| Msa0370600 | Msa0707220 | 0.853302 | 2.613947e-61 | -8.615850e-47 |
| Msa0378500 | Msa0707220 | 0.837840 | 4.098408e-57 | -8.615850e-47 |
| Msa0382010 | Msa0707220 | 0.811864 | 5.656013e-51 | -8.615850e-47 |
| Msa0392420 | Msa0707220 | 0.809677 | 1.681434e-50 | -8.615850e-47 |
| Msa0392460 | Msa0707220 | 0.807565 | 4.750891e-50 | -8.615850e-47 |
| Msa0392490 | Msa0707220 | 0.806622 | 7.523179e-50 | -8.615850e-47 |
| Msa0406000 | Msa0707220 | 0.836843 | 7.376659e-57 | -8.615850e-47 |
| Msa0408630 | Msa0707220 | 0.819754 | 9.837542e-53 | -8.615850e-47 |
| Msa0408640 | Msa0707220 | 0.810554 | 1.088066e-50 | -8.615850e-47 |
| Msa0413930 | Msa0707220 | 0.858340 | 8.809332e-63 | -8.615850e-47 |
| Msa0418200 | Msa0707220 | 0.868738 | 5.224543e-66 | -8.615850e-47 |
| Msa0419820 | Msa0707220 | 0.815380 | 9.522594e-52 | -8.615850e-47 |
| Msa0423100 | Msa0707220 | 0.807008 | 6.233913e-50 | -8.615850e-47 |
| Msa0424340 | Msa0707220 | 0.806432 | 8.250312e-50 | -8.615850e-47 |
| Msa0424350 | Msa0707220 | 0.803510 | 3.367977e-49 | -8.615850e-47 |
| Msa0430820 | Msa0707220 | 0.811513 | 6.741499e-51 | -8.615850e-47 |
| Msa0436460 | Msa0707220 | 0.810374 | 1.189759e-50 | -8.615850e-47 |
| Msa0436500 | Msa0707220 | 0.876288 | 1.573249e-68 | -8.615850e-47 |
| Msa0441590 | Msa0707220 | 0.834936 | 2.246935e-56 | -8.615850e-47 |
| Msa0444010 | Msa0707220 | 0.850508 | 1.622947e-60 | -8.615850e-47 |
| Msa0451400 | Msa0707220 | 0.843181 | 1.640627e-58 | -8.615850e-47 |
| Msa0458950 | Msa0707220 | 0.839138 | 1.896089e-57 | -8.615850e-47 |
| Msa0464540 | Msa0707220 | 0.851987 | 6.203285e-61 | -8.615850e-47 |
| Msa0238890 | Msa0707220 | 0.803799 | 2.933849e-49 | -8.615850e-47 |
| Msa0239570 | Msa0707220 | 0.801598 | 8.347429e-49 | -8.615850e-47 |
| Msa0260970 | Msa0707220 | 0.803036 | 4.222372e-49 | -8.615850e-47 |
| Msa0262560 | Msa0707220 | 0.807942 | 3.949402e-50 | -8.615850e-47 |
| Msa0298240 | Msa0707220 | 0.861751 | 8.229273e-64 | -8.615850e-47 |
| Msa0300620 | Msa0707220 | 0.820160 | 7.945036e-53 | -8.615850e-47 |
| Msa0306120 | Msa0707220 | 0.816674 | 4.895313e-52 | -8.615850e-47 |
| Msa0308830 | Msa0707220 | 0.806327 | 8.680995e-50 | -8.615850e-47 |
| Msa0315990 | Msa0707220 | 0.811777 | 5.906980e-51 | -8.615850e-47 |
| Msa0322830 | Msa0707220 | 0.844093 | 9.355962e-59 | -8.615850e-47 |
| Msa0322840 | Msa0707220 | 0.859245 | 4.726416e-63 | -8.615850e-47 |
| Msa0322860 | Msa0707220 | 0.837835 | 4.111660e-57 | -8.615850e-47 |
| Msa0323610 | Msa0707220 | 0.817063 | 4.004357e-52 | -8.615850e-47 |
| Msa0329620 | Msa0707220 | 0.804070 | 2.577366e-49 | -8.615850e-47 |
| Msa0336090 | Msa0707220 | 0.817598 | 3.035122e-52 | -8.615850e-47 |
| Msa0337040 | Msa0707220 | 0.807519 | 4.858954e-50 | -8.615850e-47 |
| Msa0337850 | Msa0707220 | 0.854560 | 1.135138e-61 | -8.615850e-47 |
| Msa0344570 | Msa0707220 | 0.819054 | 1.420312e-52 | -8.615850e-47 |
| Msa0351770 | Msa0707220 | 0.835336 | 1.780679e-56 | -8.615850e-47 |
| Msa0359250 | Msa0707220 | 0.840597 | 7.902045e-58 | -8.615850e-47 |
| Msa0361260 | Msa0707220 | 0.804330 | 2.274947e-49 | -8.615850e-47 |
| Msa0487570 | Msa0707220 | 0.808849 | 2.530156e-50 | -8.615850e-47 |
| Msa0487630 | Msa0707220 | 0.801964 | 7.021789e-49 | -8.615850e-47 |
| Msa0492190 | Msa0707220 | 0.842296 | 2.820245e-58 | -8.615850e-47 |
| Msa0517390 | Msa0707220 | 0.804299 | 2.308590e-49 | -8.615850e-47 |
| Msa0520510 | Msa0707220 | 0.822583 | 2.192080e-53 | -8.615850e-47 |
| Msa0533080 | Msa0707220 | 0.809746 | 1.624465e-50 | -8.615850e-47 |
| Msa0534930 | Msa0707220 | 0.816640 | 4.982192e-52 | -8.615850e-47 |
| Msa0535040 | Msa0707220 | 0.844585 | 6.901624e-59 | -8.615850e-47 |
| Msa0537920 | Msa0707220 | 0.846976 | 1.548491e-59 | -8.615850e-47 |
| Msa0538060 | Msa0707220 | 0.806255 | 8.989460e-50 | -8.615850e-47 |
| Msa0538220 | Msa0707220 | 0.886097 | 4.600164e-72 | -8.615850e-47 |
| Msa0543850 | Msa0707220 | 0.834902 | 2.291265e-56 | -8.615850e-47 |
| Msa0571080 | Msa0707220 | 0.807727 | 4.389316e-50 | -8.615850e-47 |
| Msa0575740 | Msa0707220 | 0.818343 | 2.059507e-52 | -8.615850e-47 |
| Msa0585730 | Msa0707220 | 0.814751 | 1.313576e-51 | -8.615850e-47 |
| Msa0591790 | Msa0707220 | 0.800497 | 1.402074e-48 | -8.615850e-47 |
| Msa0594090 | Msa0707220 | 0.811296 | 7.517448e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707220 | MtrunA17_Chr8g0388511 | 89.338 | 272 | 20 | 1 | 55 | 317 | 2 | 273 | 2.45e-173 | 488 |
| Msa0707220 | MtrunA17_Chr8g0388511 | 92.500 | 40 | 3 | 0 | 300 | 339 | 314 | 353 | 7.48e-16 | 78.6 |
| Msa0707220 | MtrunA17_Chr1g0204841 | 64.561 | 285 | 91 | 2 | 43 | 317 | 32 | 316 | 4.65e-130 | 381 |
| Msa0707220 | MtrunA17_Chr1g0204841 | 50.862 | 116 | 23 | 1 | 300 | 381 | 357 | 472 | 3.46e-26 | 109 |
| Msa0707220 | MtrunA17_Chr8g0388531 | 79.111 | 225 | 36 | 2 | 28 | 241 | 1 | 225 | 3.17e-123 | 355 |
| Msa0707220 | MtrunA17_Chr8g0388551 | 69.231 | 260 | 35 | 3 | 36 | 293 | 1 | 217 | 3.48e-120 | 350 |
| Msa0707220 | MtrunA17_Chr4g0052121 | 44.444 | 468 | 153 | 7 | 11 | 381 | 9 | 466 | 2.95e-115 | 343 |
| Msa0707220 | MtrunA17_Chr2g0301361 | 38.876 | 445 | 167 | 8 | 37 | 379 | 46 | 487 | 3.72e-93 | 287 |
| Msa0707220 | MtrunA17_Chr4g0070171 | 43.421 | 304 | 162 | 2 | 23 | 317 | 33 | 335 | 8.85e-77 | 245 |
| Msa0707220 | MtrunA17_Chr8g0388541 | 90.426 | 94 | 9 | 0 | 246 | 339 | 1 | 94 | 6.67e-57 | 182 |
| Msa0707220 | MtrunA17_Chr1g0183091 | 33.574 | 277 | 156 | 6 | 70 | 318 | 37 | 313 | 3.33e-40 | 148 |
| Msa0707220 | MtrunA17_Chr8g0388561 | 65.487 | 113 | 8 | 1 | 300 | 381 | 58 | 170 | 1.17e-39 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707220 | AT5G46290.1 | 68.773 | 269 | 75 | 1 | 58 | 317 | 49 | 317 | 2.64e-132 | 387 |
| Msa0707220 | AT5G46290.1 | 52.586 | 116 | 21 | 1 | 300 | 381 | 358 | 473 | 4.96e-27 | 112 |
| Msa0707220 | AT5G46290.3 | 68.773 | 269 | 75 | 1 | 58 | 317 | 49 | 317 | 3.67e-132 | 387 |
| Msa0707220 | AT5G46290.3 | 46.212 | 132 | 21 | 1 | 300 | 381 | 358 | 489 | 6.67e-25 | 106 |
| Msa0707220 | AT5G46290.2 | 48.320 | 387 | 120 | 9 | 58 | 381 | 49 | 418 | 5.45e-102 | 308 |
| Msa0707220 | AT1G74960.1 | 47.566 | 267 | 130 | 2 | 60 | 317 | 120 | 385 | 3.92e-82 | 261 |
| Msa0707220 | AT1G74960.3 | 47.566 | 267 | 130 | 2 | 60 | 317 | 120 | 385 | 3.92e-82 | 261 |
| Msa0707220 | AT1G74960.2 | 47.566 | 267 | 130 | 2 | 60 | 317 | 120 | 385 | 3.92e-82 | 261 |
| Msa0707220 | AT2G04540.1 | 33.213 | 277 | 154 | 6 | 70 | 318 | 31 | 304 | 4.81e-34 | 131 |
Find 92 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACAGCAGTTCTGCTTTAT+TGG | 0.161775 | 4_4:-80440065 | Msa0707220:CDS |
| CATGGTCTTGAAGCCTTCTT+AGG | 0.261630 | 4_4:+80439839 | None:intergenic |
| ATGAAATATTGTTTAGTTGC+AGG | 0.283817 | 4_4:-80440528 | Msa0707220:CDS |
| ACAGCTATCTCAAATTCATT+TGG | 0.288514 | 4_4:-80438368 | Msa0707220:intron |
| ATGGGTCTTGTGTCAGTCTT+TGG | 0.300758 | 4_4:-80440720 | Msa0707220:CDS |
| AGGCATCAAACCTATCTATT+AGG | 0.312929 | 4_4:+80440643 | None:intergenic |
| CAAATTAAGGAATATATAAA+AGG | 0.321353 | 4_4:+80441617 | None:intergenic |
| TCAAGCTTCCCCGTCCGTTT+TGG | 0.321480 | 4_4:-80440621 | Msa0707220:CDS |
| TCTTCAAAAGGTTACATTGA+TGG | 0.328774 | 4_4:-80440579 | Msa0707220:CDS |
| GCTTTATTGGCTATAGAAAC+TGG | 0.329983 | 4_4:-80440052 | Msa0707220:CDS |
| TGGAAGGGAAGAACAAATTA+AGG | 0.338159 | 4_4:+80441604 | None:intergenic |
| GGCTATAGAAACTGGCCTAA+TGG | 0.341363 | 4_4:-80440044 | Msa0707220:CDS |
| CAGCTATCTCAAATTCATTT+GGG | 0.344596 | 4_4:-80438367 | Msa0707220:CDS |
| GCAGTAGAAATGGAATAATT+TGG | 0.351291 | 4_4:+80440019 | None:intergenic |
| ATCTCAAATTCATTTGGGTT+TGG | 0.351713 | 4_4:-80438362 | Msa0707220:CDS |
| TTGGAGCATTCATTGCTTGC+AGG | 0.356258 | 4_4:-80439886 | Msa0707220:CDS |
| AAGTGGTGAAGTAGATATTA+TGG | 0.364011 | 4_4:-80439948 | Msa0707220:CDS |
| GCTATAGAAACTGGCCTAAT+GGG | 0.366775 | 4_4:-80440043 | Msa0707220:CDS |
| TGGAATAATTTGGTCCCATT+AGG | 0.388383 | 4_4:+80440029 | None:intergenic |
| TCATTCTAAGCCCTTCATAC+TGG | 0.394389 | 4_4:+80441513 | None:intergenic |
| AATTACAATTAGGGTGTGAA+TGG | 0.406993 | 4_4:+80438311 | None:intergenic |
| TTTGTCCTTGGTGAAGGCTC+TGG | 0.413751 | 4_4:-80439797 | Msa0707220:CDS |
| TGGGTTTGGTGGACATAATT+CGG | 0.417446 | 4_4:-80438348 | Msa0707220:CDS |
| TCACTTATACCTTCTGGTGT+TGG | 0.427107 | 4_4:-80439905 | Msa0707220:CDS |
| TCAAATTCATTTGGGTTTGG+TGG | 0.427308 | 4_4:-80438359 | Msa0707220:CDS |
| GTGGGATAAGCCTAATAGAT+AGG | 0.427864 | 4_4:-80440653 | Msa0707220:CDS |
| TGGTGAAGGCTCTGGTGTAC+TGG | 0.437806 | 4_4:-80439789 | Msa0707220:intron |
| GCACTTGAAGATGCTAATCT+TGG | 0.441793 | 4_4:-80440498 | Msa0707220:CDS |
| AATAAAGCAGAACTGCTGTT+AGG | 0.448303 | 4_4:+80440067 | None:intergenic |
| CTGAAATGTAAGAAAACAAA+TGG | 0.458401 | 4_4:+80441696 | None:intergenic |
| CTCTCACTCGAAAGGGTCAT+AGG | 0.461629 | 4_4:-80440123 | Msa0707220:CDS |
| CACCGTGATGGCTTTGTCCT+TGG | 0.463528 | 4_4:-80439809 | Msa0707220:CDS |
| GATGGCTTTGTCCTTGGTGA+AGG | 0.465037 | 4_4:-80439803 | Msa0707220:CDS |
| CATCAGAATTGAAAATGAAC+GGG | 0.470500 | 4_4:-80439033 | Msa0707220:CDS |
| GAAGCTTCACTTATACCTTC+TGG | 0.473210 | 4_4:-80439911 | Msa0707220:CDS |
| ATCAACAGCATTGTTAAAAG+TGG | 0.481436 | 4_4:+80440147 | None:intergenic |
| ATTACAATTAGGGTGTGAAT+GGG | 0.482509 | 4_4:+80438312 | None:intergenic |
| GTATCTTTGGTCCAGTATGA+AGG | 0.482698 | 4_4:-80441524 | Msa0707220:CDS |
| ATTGAAAATGAACGGGACTA+AGG | 0.484775 | 4_4:-80439026 | Msa0707220:intron |
| CATGCCACATCCACGGTAGC+TGG | 0.488866 | 4_4:-80439100 | Msa0707220:CDS |
| ATTGTTTAGTTGCAGGAAAG+AGG | 0.494720 | 4_4:-80440521 | Msa0707220:CDS |
| CGCGTATCTGACCACCAAAA+CGG | 0.495054 | 4_4:+80440607 | None:intergenic |
| ATACGCGATTTCTCTTCAAA+AGG | 0.496139 | 4_4:-80440591 | Msa0707220:CDS |
| GAGAGTGGTAATAACAGGAA+TGG | 0.497255 | 4_4:-80440739 | Msa0707220:CDS |
| AGTTCTAGTAGGATCAGGAA+TGG | 0.500705 | 4_4:-80440179 | Msa0707220:intron |
| AAGAAGCATGAAGTTAATGT+TGG | 0.500838 | 4_4:-80438476 | Msa0707220:intron |
| AGAAGGTATAAGTGAAGCTT+CGG | 0.506743 | 4_4:+80439913 | None:intergenic |
| AGAGTGGTAATAACAGGAAT+GGG | 0.509159 | 4_4:-80440738 | Msa0707220:CDS |
| TGTTGCACAAGCAGTAGAAA+TGG | 0.509995 | 4_4:+80440009 | None:intergenic |
| AAGCTTCTAGAGGGAGAAAG+TGG | 0.510159 | 4_4:-80440672 | Msa0707220:CDS |
| GTCACCAGCTACCGTGGATG+TGG | 0.515201 | 4_4:+80439096 | None:intergenic |
| CAAGAAATGCAAAACAATCA+AGG | 0.518811 | 4_4:-80440814 | Msa0707220:CDS |
| ATCTGACCACCAAAACGGAC+GGG | 0.522249 | 4_4:+80440612 | None:intergenic |
| ATCCACGGTAGCTGGTGACT+TGG | 0.524496 | 4_4:-80439092 | Msa0707220:CDS |
| TGGACCAAAGATACCTCAAA+AGG | 0.527943 | 4_4:+80441533 | None:intergenic |
| TGGTGGACATAATTCGGTAG+TGG | 0.531420 | 4_4:-80438342 | Msa0707220:CDS |
| GAAGTAGATATTATGGTGGT+TGG | 0.533930 | 4_4:-80439941 | Msa0707220:CDS |
| GAGGAATGAAGAGCCTAAGA+AGG | 0.534878 | 4_4:-80439852 | Msa0707220:CDS |
| GTTGATGCTCTCACTCGAAA+GGG | 0.544680 | 4_4:-80440130 | Msa0707220:CDS |
| TTGTTTAGTTGCAGGAAAGA+GGG | 0.545243 | 4_4:-80440520 | Msa0707220:CDS |
| AAAACTAACATGGCATGCAT+TGG | 0.552070 | 4_4:-80441572 | Msa0707220:exon |
| TGGAGCATTCATTGCTTGCA+GGG | 0.554208 | 4_4:-80439885 | Msa0707220:CDS |
| ACATCAGAATTGAAAATGAA+CGG | 0.560317 | 4_4:-80439034 | Msa0707220:CDS |
| GGTAGCTGGTGACTTGGCTG+AGG | 0.563821 | 4_4:-80439086 | Msa0707220:CDS |
| CCATCACGGTGTTTGTCCCA+TGG | 0.565247 | 4_4:+80439821 | None:intergenic |
| GTTCTAGTAGGATCAGGAAT+GGG | 0.565575 | 4_4:-80440178 | Msa0707220:intron |
| ATGCAAAACAATCAAGGTCA+AGG | 0.567045 | 4_4:-80440808 | Msa0707220:CDS |
| TGTTGATGCTCTCACTCGAA+AGG | 0.568540 | 4_4:-80440131 | Msa0707220:CDS |
| ACTGCTGTTAGGAATGGTGT+AGG | 0.571087 | 4_4:+80440078 | None:intergenic |
| AGCAGAACTGCTGTTAGGAA+TGG | 0.571244 | 4_4:+80440072 | None:intergenic |
| TATCTTTGGTCCAGTATGAA+GGG | 0.577661 | 4_4:-80441523 | Msa0707220:CDS |
| ACATTGATGGCAAGACTGAT+CGG | 0.587450 | 4_4:-80440566 | Msa0707220:CDS |
| CTTGCAGGGCGTTGTCTCAG+AGG | 0.590883 | 4_4:-80439871 | Msa0707220:CDS |
| CTAAGAAGGCTTCAAGACCA+TGG | 0.592322 | 4_4:-80439838 | Msa0707220:CDS |
| TCTGACCACCAAAACGGACG+GGG | 0.595025 | 4_4:+80440613 | None:intergenic |
| TAAGAAGGCTTCAAGACCAT+GGG | 0.598820 | 4_4:-80439837 | Msa0707220:CDS |
| GCTTCTCATCACATTAGAAG+TGG | 0.604035 | 4_4:-80439965 | Msa0707220:CDS |
| ATGAATGCTCCAACACCAGA+AGG | 0.607630 | 4_4:+80439896 | None:intergenic |
| CACCAAGGACAAAGCCATCA+CGG | 0.608128 | 4_4:+80439807 | None:intergenic |
| TATCTGACCACCAAAACGGA+CGG | 0.610935 | 4_4:+80440611 | None:intergenic |
| CTGCTGTTAGGAATGGTGTA+GGG | 0.611344 | 4_4:+80440079 | None:intergenic |
| AGCCAAGTCACCAGCTACCG+TGG | 0.614633 | 4_4:+80439090 | None:intergenic |
| AAAACGGACGGGGAAGCTTG+AGG | 0.623712 | 4_4:+80440623 | None:intergenic |
| CCATGGGACAAACACCGTGA+TGG | 0.625136 | 4_4:-80439821 | Msa0707220:CDS |
| GTAGATATTATGGTGGTTGG+TGG | 0.636144 | 4_4:-80439938 | Msa0707220:CDS |
| GAATGCTCATGCCACATCCA+CGG | 0.642543 | 4_4:-80439107 | Msa0707220:CDS |
| CTAGTAGGATCAGGAATGGG+AGG | 0.653490 | 4_4:-80440175 | Msa0707220:intron |
| AGCTTCTAGAGGGAGAAAGT+GGG | 0.654437 | 4_4:-80440671 | Msa0707220:CDS |
| TGGTGAAGTAGATATTATGG+TGG | 0.671392 | 4_4:-80439945 | Msa0707220:CDS |
| TTACAATTAGGGTGTGAATG+GGG | 0.673231 | 4_4:+80438313 | None:intergenic |
| AATATTTCATGCAATCATCG+AGG | 0.737038 | 4_4:+80440541 | None:intergenic |
| GTACACCAGAGCCTTCACCA+AGG | 0.794543 | 4_4:+80439792 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAGAAAAAGA+AGG | + | chr4_4:80438597-80438616 | None:intergenic | 10.0% |
| !! | AATTAATAATAAAAAAAACG+GGG | + | chr4_4:80438928-80438947 | None:intergenic | 10.0% |
| !! | GAATTAATAATAAAAAAAAC+GGG | + | chr4_4:80438929-80438948 | None:intergenic | 10.0% |
| !! | CAAATTAAGGAATATATAAA+AGG | + | chr4_4:80438402-80438421 | None:intergenic | 15.0% |
| !! | ATAAAGAAATCAATGAATAA+TGG | + | chr4_4:80440269-80440288 | None:intergenic | 15.0% |
| !!! | ATTATTCATTGATTTCTTTA+TGG | - | chr4_4:80440268-80440287 | Msa0707220:intron | 15.0% |
| !! | TTATTATTGAGATAAGATAA+TGG | - | chr4_4:80440442-80440461 | Msa0707220:intron | 15.0% |
| !! | AAAAATAATTGCTGAATATT+TGG | - | chr4_4:80440496-80440515 | Msa0707220:CDS | 15.0% |
| !! | AAAATAATTGCTGAATATTT+GGG | - | chr4_4:80440497-80440516 | Msa0707220:CDS | 15.0% |
| !! | TTAACTTAATAAGTTCTGTT+TGG | - | chr4_4:80438730-80438749 | Msa0707220:intron | 20.0% |
| !! | ATTAAGAAAATAGATTCACT+TGG | - | chr4_4:80438788-80438807 | Msa0707220:intron | 20.0% |
| !!! | CAAATATTTTCTCTTTTTGA+CGG | - | chr4_4:80438824-80438843 | Msa0707220:intron | 20.0% |
| !!! | AGTATTAAGAGTACAATTTA+TGG | - | chr4_4:80438865-80438884 | Msa0707220:intron | 20.0% |
| !!! | TACAATTTATGGATTTTCAT+TGG | - | chr4_4:80438876-80438895 | Msa0707220:intron | 20.0% |
| !!! | ACAATTTATGGATTTTCATT+GGG | - | chr4_4:80438877-80438896 | Msa0707220:intron | 20.0% |
| !!! | CTAAATCTTTTAAACATGTT+GGG | + | chr4_4:80438959-80438978 | None:intergenic | 20.0% |
| !!! | TCTAAATCTTTTAAACATGT+TGG | + | chr4_4:80438960-80438979 | None:intergenic | 20.0% |
| !! | TTATATTGACAATATGTTCA+AGG | + | chr4_4:80439092-80439111 | None:intergenic | 20.0% |
| !! | ATCTTACCTTTATTGTTAAT+TGG | - | chr4_4:80439151-80439170 | Msa0707220:intron | 20.0% |
| !!! | TCTCAGTTATTTCAAATTTT+AGG | + | chr4_4:80439701-80439720 | None:intergenic | 20.0% |
| !!! | TAAAATTTGAAATAACTGAG+AGG | - | chr4_4:80439700-80439719 | Msa0707220:intron | 20.0% |
| !!! | TATCCTATTTTTTTAACAGA+TGG | - | chr4_4:80439798-80439817 | Msa0707220:CDS | 20.0% |
| !!! | AAAACATTTTGAATTGCATT+AGG | + | chr4_4:80440411-80440430 | None:intergenic | 20.0% |
| !!! | ACTAAGATGAATTTTTTTTC+CGG | + | chr4_4:80440660-80440679 | None:intergenic | 20.0% |
| !! | ATTTCAAACATGTACTTAAT+CGG | - | chr4_4:80440810-80440829 | Msa0707220:CDS | 20.0% |
| !! | AGTTTAGAAATTAACCAATT+AGG | + | chr4_4:80440872-80440891 | None:intergenic | 20.0% |
| !!! | TGATTAAGTTGTTAATTTAG+CGG | + | chr4_4:80441221-80441240 | None:intergenic | 20.0% |
| !!! | CATGCTTCTTTTTAAAATTA+GGG | + | chr4_4:80441530-80441549 | None:intergenic | 20.0% |
| !!! | TCATGCTTCTTTTTAAAATT+AGG | + | chr4_4:80441531-80441550 | None:intergenic | 20.0% |
| ! | CTGAAATGTAAGAAAACAAA+TGG | + | chr4_4:80438323-80438342 | None:intergenic | 25.0% |
| !!! | CATTTGTTTTCTTACATTTC+AGG | - | chr4_4:80438321-80438340 | Msa0707220:CDS | 25.0% |
| !!! | ATGTTAGTTTTCTCTCAAAA+TGG | + | chr4_4:80438435-80438454 | None:intergenic | 25.0% |
| !!! | ATTTTGAGAGAAAACTAACA+TGG | - | chr4_4:80438434-80438453 | Msa0707220:intron | 25.0% |
| !! | GAAGCTAAAATGTATCTTTT+CGG | + | chr4_4:80438564-80438583 | None:intergenic | 25.0% |
| !!! | AAAAGATACATTTTAGCTTC+AGG | - | chr4_4:80438564-80438583 | Msa0707220:intron | 25.0% |
| !! | AAACTTGGATATTTAAAGCA+TGG | + | chr4_4:80438673-80438692 | None:intergenic | 25.0% |
| ! | AACATCAAGAATGTAAAACT+TGG | + | chr4_4:80438688-80438707 | None:intergenic | 25.0% |
| ! | CTATATTAATATCGATATCC+CGG | - | chr4_4:80439051-80439070 | Msa0707220:CDS | 25.0% |
| ! | TATATTAATATCGATATCCC+GGG | - | chr4_4:80439052-80439071 | Msa0707220:CDS | 25.0% |
| ! | TCAACTCCAATTAACAATAA+AGG | + | chr4_4:80439160-80439179 | None:intergenic | 25.0% |
| ! | ATGAAATATTGTTTAGTTGC+AGG | - | chr4_4:80439488-80439507 | Msa0707220:intron | 25.0% |
| !!! | ACTTTTGACTTACATTGTTA+AGG | + | chr4_4:80439553-80439572 | None:intergenic | 25.0% |
| ! | TTTCTTAAAGTTTCCTACTT+TGG | - | chr4_4:80439575-80439594 | Msa0707220:intron | 25.0% |
| ! | TTCTTAAAGTTTCCTACTTT+GGG | - | chr4_4:80439576-80439595 | Msa0707220:intron | 25.0% |
| ! | CAACATGTATTTACATACTA+CGG | + | chr4_4:80439666-80439685 | None:intergenic | 25.0% |
| !! | GTATCATTATTCTTTTGAAC+CGG | - | chr4_4:80439751-80439770 | Msa0707220:intron | 25.0% |
| ! | TGTCCATCTGTTAAAAAAAT+AGG | + | chr4_4:80439804-80439823 | None:intergenic | 25.0% |
| ! | AACATGTAAATACACAATGT+TGG | + | chr4_4:80440364-80440383 | None:intergenic | 25.0% |
| ! | AAGAAGTAATCATTAACATC+CGG | - | chr4_4:80440638-80440657 | Msa0707220:CDS | 25.0% |
| !!! | TAAAGTTGATGAATCCTAAT+TGG | - | chr4_4:80440855-80440874 | Msa0707220:intron | 25.0% |
| ! | GGTTAATTTCTAAACTGTAA+AGG | - | chr4_4:80440876-80440895 | Msa0707220:intron | 25.0% |
| !! | TGCAATCAAACAAGTTTTTA+AGG | - | chr4_4:80440957-80440976 | Msa0707220:intron | 25.0% |
| ! | ACATCAGAATTGAAAATGAA+CGG | - | chr4_4:80440982-80441001 | Msa0707220:intron | 25.0% |
| ! | AAGATCAATAAGATGTTGTT+GGG | + | chr4_4:80441050-80441069 | None:intergenic | 25.0% |
| !!! | TCTTTTTTTCAGTCAATGAT+TGG | - | chr4_4:80441092-80441111 | Msa0707220:intron | 25.0% |
| ! | AACATAAGTAGTTGTGAATA+AGG | + | chr4_4:80441374-80441393 | None:intergenic | 25.0% |
| !! | TTTGTTTGAATTTGCGTTTT+TGG | + | chr4_4:80441408-80441427 | None:intergenic | 25.0% |
| ! | GAAATAGATGAAACATATGT+TGG | + | chr4_4:80441432-80441451 | None:intergenic | 25.0% |
| ! | AACATTGGTAAAAGTTTAGA+AGG | - | chr4_4:80441584-80441603 | Msa0707220:exon | 25.0% |
| ! | AGTTTTCTCTCAAAATGGAA+GGG | + | chr4_4:80438430-80438449 | None:intergenic | 30.0% |
| ! | TAGTTTTCTCTCAAAATGGA+AGG | + | chr4_4:80438431-80438450 | None:intergenic | 30.0% |
| ! | AATTTGAGAGTGTAACTCAT+TGG | + | chr4_4:80438759-80438778 | None:intergenic | 30.0% |
| !! | ATTTTCTCTTTTTGACGGAT+AGG | - | chr4_4:80438829-80438848 | Msa0707220:intron | 30.0% |
| GCTTAAATTCAAAACAGAGA+AGG | + | chr4_4:80438999-80439018 | None:intergenic | 30.0% | |
| TGTTGTAGGTAACATTTCTT+TGG | + | chr4_4:80439126-80439145 | None:intergenic | 30.0% | |
| AGGTAAGATAAACATGTTGT+AGG | + | chr4_4:80439140-80439159 | None:intergenic | 30.0% | |
| !! | CTTGATTGTTTTGCATTTCT+TGG | + | chr4_4:80439204-80439223 | None:intergenic | 30.0% |
| CAAGAAATGCAAAACAATCA+AGG | - | chr4_4:80439202-80439221 | Msa0707220:intron | 30.0% | |
| ! | TTTGGATCTTTCTCTCTTTT+AGG | + | chr4_4:80439254-80439273 | None:intergenic | 30.0% |
| !!! | GTTATTACCACTCTCTTTTT+TGG | + | chr4_4:80439272-80439291 | None:intergenic | 30.0% |
| AAAAAGAGAGTGGTAATAAC+AGG | - | chr4_4:80439272-80439291 | Msa0707220:intron | 30.0% | |
| ! | ATTTTACAACAAGCTTCTAG+AGG | - | chr4_4:80439334-80439353 | Msa0707220:intron | 30.0% |
| ! | TTTTACAACAAGCTTCTAGA+GGG | - | chr4_4:80439335-80439354 | Msa0707220:intron | 30.0% |
| TCTTCAAAAGGTTACATTGA+TGG | - | chr4_4:80439437-80439456 | Msa0707220:intron | 30.0% | |
| AATATTTCATGCAATCATCG+AGG | + | chr4_4:80439478-80439497 | None:intergenic | 30.0% | |
| TACTGTTAGAATAGCAATTC+CGG | + | chr4_4:80439773-80439792 | None:intergenic | 30.0% | |
| ATCAACAGCATTGTTAAAAG+TGG | + | chr4_4:80439872-80439891 | None:intergenic | 30.0% | |
| GCAGTAGAAATGGAATAATT+TGG | + | chr4_4:80440000-80440019 | None:intergenic | 30.0% | |
| AAGTGGTGAAGTAGATATTA+TGG | - | chr4_4:80440068-80440087 | Msa0707220:CDS | 30.0% | |
| ! | TTGTTCACTTTAGAAGAGTT+TGG | - | chr4_4:80440308-80440327 | Msa0707220:intron | 30.0% |
| ATAATTGCTGAATATTTGGG+TGG | - | chr4_4:80440500-80440519 | Msa0707220:CDS | 30.0% | |
| AGTATCATCTTGCATAAACA+AGG | - | chr4_4:80440577-80440596 | Msa0707220:CDS | 30.0% | |
| GTATCATCTTGCATAAACAA+GGG | - | chr4_4:80440578-80440597 | Msa0707220:CDS | 30.0% | |
| CTTAGTACATGTTTAGATTG+CGG | - | chr4_4:80440674-80440693 | Msa0707220:CDS | 30.0% | |
| ! | TTTTGGCAAAAACTGCATTT+TGG | - | chr4_4:80440729-80440748 | Msa0707220:CDS | 30.0% |
| CATCAGAATTGAAAATGAAC+GGG | - | chr4_4:80440983-80441002 | Msa0707220:intron | 30.0% | |
| CAAGATCAATAAGATGTTGT+TGG | + | chr4_4:80441051-80441070 | None:intergenic | 30.0% | |
| ! | TCAATGATTGGTCATTGTAT+TGG | - | chr4_4:80441104-80441123 | Msa0707220:intron | 30.0% |
| AATACATCTTGGTTAATGGT+TGG | + | chr4_4:80441191-80441210 | None:intergenic | 30.0% | |
| AGACAATACATCTTGGTTAA+TGG | + | chr4_4:80441195-80441214 | None:intergenic | 30.0% | |
| ! | AAGAAGCATGAAGTTAATGT+TGG | - | chr4_4:80441540-80441559 | Msa0707220:CDS | 30.0% |
| ! | TTTTACCAATGTTCACAACA+AGG | + | chr4_4:80441577-80441596 | None:intergenic | 30.0% |
| ACAGCTATCTCAAATTCATT+TGG | - | chr4_4:80441648-80441667 | Msa0707220:five_prime_UTR | 30.0% | |
| CAGCTATCTCAAATTCATTT+GGG | - | chr4_4:80441649-80441668 | Msa0707220:five_prime_UTR | 30.0% | |
| ! | ATCTCAAATTCATTTGGGTT+TGG | - | chr4_4:80441654-80441673 | Msa0707220:five_prime_UTR | 30.0% |
| TGGAAGGGAAGAACAAATTA+AGG | + | chr4_4:80438415-80438434 | None:intergenic | 35.0% | |
| AAAACTAACATGGCATGCAT+TGG | - | chr4_4:80438444-80438463 | Msa0707220:intron | 35.0% | |
| ! | GTTTAGTACATGTCCTTTTG+AGG | - | chr4_4:80438470-80438489 | Msa0707220:intron | 35.0% |
| !!! | ATGTCCTTTTGAGGTATCTT+TGG | - | chr4_4:80438479-80438498 | Msa0707220:CDS | 35.0% |
| TATCTTTGGTCCAGTATGAA+GGG | - | chr4_4:80438493-80438512 | Msa0707220:CDS | 35.0% | |
| TCTAACTGAGCTACAATACA+AGG | + | chr4_4:80438629-80438648 | None:intergenic | 35.0% | |
| ! | TATGGATTTTCATTGGGCAT+CGG | - | chr4_4:80438883-80438902 | Msa0707220:intron | 35.0% |
| ATGCAAAACAATCAAGGTCA+AGG | - | chr4_4:80439208-80439227 | Msa0707220:intron | 35.0% | |
| GAAAGATCCAAAAAAGAGAG+TGG | - | chr4_4:80439262-80439281 | Msa0707220:intron | 35.0% | |
| AGAGTGGTAATAACAGGAAT+GGG | - | chr4_4:80439278-80439297 | Msa0707220:intron | 35.0% | |
| AGGCATCAAACCTATCTATT+AGG | + | chr4_4:80439376-80439395 | None:intergenic | 35.0% | |
| ATACGCGATTTCTCTTCAAA+AGG | - | chr4_4:80439425-80439444 | Msa0707220:intron | 35.0% | |
| ATTGTTTAGTTGCAGGAAAG+AGG | - | chr4_4:80439495-80439514 | Msa0707220:intron | 35.0% | |
| TTGTTTAGTTGCAGGAAAGA+GGG | - | chr4_4:80439496-80439515 | Msa0707220:intron | 35.0% | |
| GATACCACAAACTATAGCTA+CGG | - | chr4_4:80439602-80439621 | Msa0707220:intron | 35.0% | |
| ! | GGCGCATATTTACTGATTAA+GGG | - | chr4_4:80439623-80439642 | Msa0707220:intron | 35.0% |
| CAGATGGACAAAACAAGAAT+AGG | - | chr4_4:80439814-80439833 | Msa0707220:CDS | 35.0% | |
| ! | ACAAGAATAGGAGTTCTAGT+AGG | - | chr4_4:80439826-80439845 | Msa0707220:CDS | 35.0% |
| ATGGTGTAGGGAATGAAAAA+TGG | + | chr4_4:80439928-80439947 | None:intergenic | 35.0% | |
| AATAAAGCAGAACTGCTGTT+AGG | + | chr4_4:80439952-80439971 | None:intergenic | 35.0% | |
| TAACAGCAGTTCTGCTTTAT+TGG | - | chr4_4:80439951-80439970 | Msa0707220:CDS | 35.0% | |
| ! | GCTTTATTGGCTATAGAAAC+TGG | - | chr4_4:80439964-80439983 | Msa0707220:CDS | 35.0% |
| TGGAATAATTTGGTCCCATT+AGG | + | chr4_4:80439990-80440009 | None:intergenic | 35.0% | |
| TGGTGAAGTAGATATTATGG+TGG | - | chr4_4:80440071-80440090 | Msa0707220:CDS | 35.0% | |
| GAAGTAGATATTATGGTGGT+TGG | - | chr4_4:80440075-80440094 | Msa0707220:CDS | 35.0% | |
| ! | AGAAGGTATAAGTGAAGCTT+CGG | + | chr4_4:80440106-80440125 | None:intergenic | 35.0% |
| ! | AAGAGTTTGGTCGTTCTTTT+AGG | - | chr4_4:80440321-80440340 | Msa0707220:intron | 35.0% |
| TACTTCTTTGTTACCTCTTC+AGG | + | chr4_4:80440626-80440645 | None:intergenic | 35.0% | |
| ATTGAAAATGAACGGGACTA+AGG | - | chr4_4:80440990-80441009 | Msa0707220:intron | 35.0% | |
| ACCATCAAAGCAATAACAAC+TGG | - | chr4_4:80441155-80441174 | Msa0707220:intron | 35.0% | |
| ! | TCAAATTCATTTGGGTTTGG+TGG | - | chr4_4:80441657-80441676 | Msa0707220:five_prime_UTR | 35.0% |
| TGGACCAAAGATACCTCAAA+AGG | + | chr4_4:80438486-80438505 | None:intergenic | 40.0% | |
| GTATCTTTGGTCCAGTATGA+AGG | - | chr4_4:80438492-80438511 | Msa0707220:CDS | 40.0% | |
| TCATTCTAAGCCCTTCATAC+TGG | + | chr4_4:80438506-80438525 | None:intergenic | 40.0% | |
| ! | ATATCCCGGGTTATTAGCTT+AGG | - | chr4_4:80439065-80439084 | Msa0707220:CDS | 40.0% |
| AAGGTCCTAAGCTAATAACC+CGG | + | chr4_4:80439073-80439092 | None:intergenic | 40.0% | |
| GAGAGTGGTAATAACAGGAA+TGG | - | chr4_4:80439277-80439296 | Msa0707220:intron | 40.0% | |
| GTGGGATAAGCCTAATAGAT+AGG | - | chr4_4:80439363-80439382 | Msa0707220:intron | 40.0% | |
| ! | ACATTGATGGCAAGACTGAT+CGG | - | chr4_4:80439450-80439469 | Msa0707220:intron | 40.0% |
| GCACTTGAAGATGCTAATCT+TGG | - | chr4_4:80439518-80439537 | Msa0707220:intron | 40.0% | |
| TGTGGTATCAATCCCAAAGT+AGG | + | chr4_4:80439591-80439610 | None:intergenic | 40.0% | |
| ! | CGGCGCATATTTACTGATTA+AGG | - | chr4_4:80439622-80439641 | Msa0707220:intron | 40.0% |
| ! | ATAGGAGTTCTAGTAGGATC+AGG | - | chr4_4:80439832-80439851 | Msa0707220:CDS | 40.0% |
| ! | AGTTCTAGTAGGATCAGGAA+TGG | - | chr4_4:80439837-80439856 | Msa0707220:CDS | 40.0% |
| GTTCTAGTAGGATCAGGAAT+GGG | - | chr4_4:80439838-80439857 | Msa0707220:CDS | 40.0% | |
| ! | GCTATAGAAACTGGCCTAAT+GGG | - | chr4_4:80439973-80439992 | Msa0707220:CDS | 40.0% |
| TGTTGCACAAGCAGTAGAAA+TGG | + | chr4_4:80440010-80440029 | None:intergenic | 40.0% | |
| GCTTCTCATCACATTAGAAG+TGG | - | chr4_4:80440051-80440070 | Msa0707220:CDS | 40.0% | |
| GTAGATATTATGGTGGTTGG+TGG | - | chr4_4:80440078-80440097 | Msa0707220:CDS | 40.0% | |
| GAAGCTTCACTTATACCTTC+TGG | - | chr4_4:80440105-80440124 | Msa0707220:CDS | 40.0% | |
| TCACTTATACCTTCTGGTGT+TGG | - | chr4_4:80440111-80440130 | Msa0707220:CDS | 40.0% | |
| TAAGAAGGCTTCAAGACCAT+GGG | - | chr4_4:80440179-80440198 | Msa0707220:intron | 40.0% | |
| ! | CTTAGAGAGTGCAACAAAGA+GGG | - | chr4_4:80440469-80440488 | Msa0707220:intron | 40.0% |
| ! | TTAGAGAGTGCAACAAAGAG+GGG | - | chr4_4:80440470-80440489 | Msa0707220:intron | 40.0% |
| GTGATGAGCATCACATGTTA+TGG | + | chr4_4:80440528-80440547 | None:intergenic | 40.0% | |
| ATGACTGATCCTAGATCTGA+TGG | - | chr4_4:80440548-80440567 | Msa0707220:CDS | 40.0% | |
| AACAAGGGTTTAGAAGATGC+TGG | - | chr4_4:80440593-80440612 | Msa0707220:CDS | 40.0% | |
| ACAAGGGTTTAGAAGATGCT+GGG | - | chr4_4:80440594-80440613 | Msa0707220:CDS | 40.0% | |
| ATGTTTAGATTGCGGTGAGT+TGG | - | chr4_4:80440682-80440701 | Msa0707220:CDS | 40.0% | |
| ! | CACGGTGTAACGTGATATTT+TGG | - | chr4_4:80440712-80440731 | Msa0707220:CDS | 40.0% |
| ! | GCCAGTTGTTATTGCTTTGA+TGG | + | chr4_4:80441159-80441178 | None:intergenic | 40.0% |
| TCAAAGCAATAACAACTGGC+TGG | - | chr4_4:80441159-80441178 | Msa0707220:intron | 40.0% | |
| ! | CTACCTTTTTCCACAGAACT+TGG | - | chr4_4:80441479-80441498 | Msa0707220:CDS | 40.0% |
| ! | GATTGCCTTGTTGTGAACAT+TGG | - | chr4_4:80441569-80441588 | Msa0707220:exon | 40.0% |
| !! | TGGGTTTGGTGGACATAATT+CGG | - | chr4_4:80441668-80441687 | Msa0707220:five_prime_UTR | 40.0% |
| !!! | GGCAAGCTTTGTTTTGAGTG+TGG | + | chr4_4:80438381-80438400 | None:intergenic | 45.0% |
| !! | GCATCGGTTTGCATGAACAA+TGG | - | chr4_4:80438899-80438918 | Msa0707220:intron | 45.0% |
| AGGTCCTAAGCTAATAACCC+GGG | + | chr4_4:80439072-80439091 | None:intergenic | 45.0% | |
| TGGCTGTGATGCAAGTAGAA+AGG | + | chr4_4:80439184-80439203 | None:intergenic | 45.0% | |
| ! | ATGGGTCTTGTGTCAGTCTT+TGG | - | chr4_4:80439296-80439315 | Msa0707220:intron | 45.0% |
| ! | AAGCTTCTAGAGGGAGAAAG+TGG | - | chr4_4:80439344-80439363 | Msa0707220:intron | 45.0% |
| ! | AGCTTCTAGAGGGAGAAAGT+GGG | - | chr4_4:80439345-80439364 | Msa0707220:intron | 45.0% |
| TATCTGACCACCAAAACGGA+CGG | + | chr4_4:80439408-80439427 | None:intergenic | 45.0% | |
| TGTTGATGCTCTCACTCGAA+AGG | - | chr4_4:80439885-80439904 | Msa0707220:CDS | 45.0% | |
| GTTGATGCTCTCACTCGAAA+GGG | - | chr4_4:80439886-80439905 | Msa0707220:CDS | 45.0% | |
| CTGCTGTTAGGAATGGTGTA+GGG | + | chr4_4:80439940-80439959 | None:intergenic | 45.0% | |
| ACTGCTGTTAGGAATGGTGT+AGG | + | chr4_4:80439941-80439960 | None:intergenic | 45.0% | |
| AGCAGAACTGCTGTTAGGAA+TGG | + | chr4_4:80439947-80439966 | None:intergenic | 45.0% | |
| ! | GGCTATAGAAACTGGCCTAA+TGG | - | chr4_4:80439972-80439991 | Msa0707220:CDS | 45.0% |
| ATGAATGCTCCAACACCAGA+AGG | + | chr4_4:80440123-80440142 | None:intergenic | 45.0% | |
| ! | TTGGAGCATTCATTGCTTGC+AGG | - | chr4_4:80440130-80440149 | Msa0707220:CDS | 45.0% |
| ! | TGGAGCATTCATTGCTTGCA+GGG | - | chr4_4:80440131-80440150 | Msa0707220:CDS | 45.0% |
| GAGGAATGAAGAGCCTAAGA+AGG | - | chr4_4:80440164-80440183 | Msa0707220:CDS | 45.0% | |
| ! | CATGGTCTTGAAGCCTTCTT+AGG | + | chr4_4:80440180-80440199 | None:intergenic | 45.0% |
| CTAAGAAGGCTTCAAGACCA+TGG | - | chr4_4:80440178-80440197 | Msa0707220:intron | 45.0% | |
| ! | GCTTAGAGAGTGCAACAAAG+AGG | - | chr4_4:80440468-80440487 | Msa0707220:intron | 45.0% |
| !! | GATCCTAGATCTGATGGACT+AGG | - | chr4_4:80440554-80440573 | Msa0707220:CDS | 45.0% |
| ACTCCTAGTCCATCAGATCT+AGG | + | chr4_4:80440560-80440579 | None:intergenic | 45.0% | |
| CAAGGGTTTAGAAGATGCTG+GGG | - | chr4_4:80440595-80440614 | Msa0707220:CDS | 45.0% | |
| GCGGTCAAGACAATACATCT+TGG | + | chr4_4:80441202-80441221 | None:intergenic | 45.0% | |
| CCTCCAAGTTCTGTGGAAAA+AGG | + | chr4_4:80441485-80441504 | None:intergenic | 45.0% | |
| ! | CCTTTTTCCACAGAACTTGG+AGG | - | chr4_4:80441482-80441501 | Msa0707220:CDS | 45.0% |
| ! | TTTTCCACAGAACTTGGAGG+AGG | - | chr4_4:80441485-80441504 | Msa0707220:CDS | 45.0% |
| ! | TGGTGGACATAATTCGGTAG+TGG | - | chr4_4:80441674-80441693 | Msa0707220:five_prime_UTR | 45.0% |
| !! | TGAATTAATAATAAAAAAAA+CGG | + | chr4_4:80438930-80438949 | None:intergenic | 5.0% |
| ATCTGACCACCAAAACGGAC+GGG | + | chr4_4:80439407-80439426 | None:intergenic | 50.0% | |
| CGCGTATCTGACCACCAAAA+CGG | + | chr4_4:80439412-80439431 | None:intergenic | 50.0% | |
| TGCGCCGTAGCTATAGTTTG+TGG | + | chr4_4:80439609-80439628 | None:intergenic | 50.0% | |
| CTAGTAGGATCAGGAATGGG+AGG | - | chr4_4:80439841-80439860 | Msa0707220:CDS | 50.0% | |
| CTCTCACTCGAAAGGGTCAT+AGG | - | chr4_4:80439893-80439912 | Msa0707220:CDS | 50.0% | |
| CACCAAGGACAAAGCCATCA+CGG | + | chr4_4:80440212-80440231 | None:intergenic | 50.0% | |
| !! | GATGGCTTTGTCCTTGGTGA+AGG | - | chr4_4:80440213-80440232 | Msa0707220:intron | 50.0% |
| TTTGTCCTTGGTGAAGGCTC+TGG | - | chr4_4:80440219-80440238 | Msa0707220:intron | 50.0% | |
| ! | CGGTGAGTTGGACAGAATCA+CGG | - | chr4_4:80440694-80440713 | Msa0707220:CDS | 50.0% |
| GAATGCTCATGCCACATCCA+CGG | - | chr4_4:80440909-80440928 | Msa0707220:intron | 50.0% | |
| !! | GGTCATTGTATTGGTGCTGC+TGG | - | chr4_4:80441113-80441132 | Msa0707220:intron | 50.0% |
| !! | TATTGGTGCTGCTGGTGCTT+TGG | - | chr4_4:80441121-80441140 | Msa0707220:intron | 50.0% |
| ACATCCTCCTCCAAGTTCTG+TGG | + | chr4_4:80441492-80441511 | None:intergenic | 50.0% | |
| AAAACGGACGGGGAAGCTTG+AGG | + | chr4_4:80439396-80439415 | None:intergenic | 55.0% | |
| ! | TCAAGCTTCCCCGTCCGTTT+TGG | - | chr4_4:80439395-80439414 | Msa0707220:intron | 55.0% |
| TCTGACCACCAAAACGGACG+GGG | + | chr4_4:80439406-80439425 | None:intergenic | 55.0% | |
| CCATCACGGTGTTTGTCCCA+TGG | + | chr4_4:80440198-80440217 | None:intergenic | 55.0% | |
| CCATGGGACAAACACCGTGA+TGG | - | chr4_4:80440195-80440214 | Msa0707220:intron | 55.0% | |
| !! | CACCGTGATGGCTTTGTCCT+TGG | - | chr4_4:80440207-80440226 | Msa0707220:intron | 55.0% |
| GTACACCAGAGCCTTCACCA+AGG | + | chr4_4:80440227-80440246 | None:intergenic | 55.0% | |
| ! | TGGTGAAGGCTCTGGTGTAC+TGG | - | chr4_4:80440227-80440246 | Msa0707220:intron | 55.0% |
| TGCTGGGGTTTCTCCTGAAG+AGG | - | chr4_4:80440610-80440629 | Msa0707220:CDS | 55.0% | |
| ATCCACGGTAGCTGGTGACT+TGG | - | chr4_4:80440924-80440943 | Msa0707220:intron | 55.0% | |
| ! | AGCTTCCCCGTCCGTTTTGG+TGG | - | chr4_4:80439398-80439417 | Msa0707220:intron | 60.0% |
| !! | CTTGCAGGGCGTTGTCTCAG+AGG | - | chr4_4:80440145-80440164 | Msa0707220:CDS | 60.0% |
| CATGCCACATCCACGGTAGC+TGG | - | chr4_4:80440916-80440935 | Msa0707220:intron | 60.0% | |
| GTCACCAGCTACCGTGGATG+TGG | + | chr4_4:80440923-80440942 | None:intergenic | 60.0% | |
| AGCCAAGTCACCAGCTACCG+TGG | + | chr4_4:80440929-80440948 | None:intergenic | 60.0% | |
| ! | GGTAGCTGGTGACTTGGCTG+AGG | - | chr4_4:80440930-80440949 | Msa0707220:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 80438319 | 80441719 | 80438319 | ID=Msa0707220;Name=Msa0707220 |
| chr4_4 | mRNA | 80438319 | 80441719 | 80438319 | ID=Msa0707220-mRNA-1;Parent=Msa0707220;Name=Msa0707220-mRNA-1;_AED=0.45;_eAED=0.45;_QI=134|0.2|0.16|1|0.8|0.83|6|0|381 |
| chr4_4 | exon | 80438319 | 80438386 | 80438319 | ID=Msa0707220-mRNA-1:exon:26159;Parent=Msa0707220-mRNA-1 |
| chr4_4 | exon | 80438477 | 80438543 | 80438477 | ID=Msa0707220-mRNA-1:exon:26158;Parent=Msa0707220-mRNA-1 |
| chr4_4 | exon | 80439027 | 80439140 | 80439027 | ID=Msa0707220-mRNA-1:exon:26157;Parent=Msa0707220-mRNA-1 |
| chr4_4 | exon | 80439790 | 80440190 | 80439790 | ID=Msa0707220-mRNA-1:exon:26156;Parent=Msa0707220-mRNA-1 |
| chr4_4 | exon | 80440475 | 80440837 | 80440475 | ID=Msa0707220-mRNA-1:exon:26155;Parent=Msa0707220-mRNA-1 |
| chr4_4 | exon | 80441453 | 80441719 | 80441453 | ID=Msa0707220-mRNA-1:exon:26154;Parent=Msa0707220-mRNA-1 |
| chr4_4 | five_prime_UTR | 80441586 | 80441719 | 80441586 | ID=Msa0707220-mRNA-1:five_prime_utr;Parent=Msa0707220-mRNA-1 |
| chr4_4 | CDS | 80441453 | 80441585 | 80441453 | ID=Msa0707220-mRNA-1:cds;Parent=Msa0707220-mRNA-1 |
| chr4_4 | CDS | 80440475 | 80440837 | 80440475 | ID=Msa0707220-mRNA-1:cds;Parent=Msa0707220-mRNA-1 |
| chr4_4 | CDS | 80439790 | 80440190 | 80439790 | ID=Msa0707220-mRNA-1:cds;Parent=Msa0707220-mRNA-1 |
| chr4_4 | CDS | 80439027 | 80439140 | 80439027 | ID=Msa0707220-mRNA-1:cds;Parent=Msa0707220-mRNA-1 |
| chr4_4 | CDS | 80438477 | 80438543 | 80438477 | ID=Msa0707220-mRNA-1:cds;Parent=Msa0707220-mRNA-1 |
| chr4_4 | CDS | 80438319 | 80438386 | 80438319 | ID=Msa0707220-mRNA-1:cds;Parent=Msa0707220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
