AlfalfaGEDB | Msa0016120

M. sativa cultivar zhongmu-4 / Msa0016120

KEGG: -
GO: -
PFAM: PF04852.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0016120	sp\|O82268\|LSH3_ARATH	73.684	190	40	1	5	194	6	185	4.53e-87	259

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0002930	Msa0016120	0.842786	2.090637e-58	-8.615850e-47
Msa0005050	Msa0016120	0.829167	5.988009e-55	-8.615850e-47
Msa0006980	Msa0016120	0.811959	5.393314e-51	-8.615850e-47
Msa0015710	Msa0016120	0.908514	1.573971e-81	-8.615850e-47
Msa0016120	Msa0017510	0.801132	1.039921e-48	-8.615850e-47
Msa0016120	Msa0022640	0.818971	1.483523e-52	-8.615850e-47
Msa0016120	Msa0036430	0.834736	2.522612e-56	-8.615850e-47
Msa0016120	Msa0050040	0.817860	2.648295e-52	-8.615850e-47
Msa0016120	Msa0053110	0.833486	5.189061e-56	-8.615850e-47
Msa0016120	Msa0072810	0.838007	3.712533e-57	-8.615850e-47
Msa0016120	Msa0080990	0.802106	6.566167e-49	-8.615850e-47
Msa0016120	Msa0084000	0.804687	1.916571e-49	-8.615850e-47
Msa0016120	Msa0084500	0.820669	6.072071e-53	-8.615850e-47
Msa0016120	Msa0098440	0.845306	4.408389e-59	-8.615850e-47
Msa0016120	Msa0102990	0.817168	3.791825e-52	-8.615850e-47
Msa0016120	Msa0103000	0.838510	2.755249e-57	-8.615850e-47
Msa0016120	Msa0106790	0.835630	1.500267e-56	-8.615850e-47
Msa0016120	Msa0109880	0.954397	3.243442e-112	-8.615850e-47
Msa0016120	Msa0110970	0.829427	5.178529e-55	-8.615850e-47
Msa0016120	Msa0118400	0.839439	1.583148e-57	-8.615850e-47
Msa0016120	Msa0124130	0.824244	8.966066e-54	-8.615850e-47
Msa0016120	Msa0130570	0.813326	2.708323e-51	-8.615850e-47
Msa0016120	Msa0141600	0.858782	6.502472e-63	-8.615850e-47
Msa0016120	Msa0147560	0.835662	1.472677e-56	-8.615850e-47
Msa0016120	Msa0149140	0.829189	5.915337e-55	-8.615850e-47
Msa0016120	Msa0153420	0.828474	8.813753e-55	-8.615850e-47
Msa0016120	Msa0156250	0.852401	4.728654e-61	-8.615850e-47
Msa0016120	Msa0157290	0.801497	8.755957e-49	-8.615850e-47
Msa0016120	Msa0161680	0.822334	2.503969e-53	-8.615850e-47
Msa0016120	Msa0176470	0.803666	3.125974e-49	-8.615850e-47
Msa0016120	Msa0203030	0.851682	7.572223e-61	-8.615850e-47
Msa0016120	Msa0212150	0.839351	1.668690e-57	-8.615850e-47
Msa0016120	Msa0219190	0.842099	3.179026e-58	-8.615850e-47
Msa0016120	Msa0221290	0.813237	2.832887e-51	-8.615850e-47
Msa0016120	Msa0238890	0.828366	9.356697e-55	-8.615850e-47
Msa0016120	Msa0252770	0.829857	4.070562e-55	-8.615850e-47
Msa0016120	Msa0289890	0.801453	8.942436e-49	-8.615850e-47
Msa0016120	Msa0289920	0.817811	2.717153e-52	-8.615850e-47
Msa0016120	Msa0298240	0.840848	6.790787e-58	-8.615850e-47
Msa0016120	Msa0306120	0.850419	1.719376e-60	-8.615850e-47
Msa0016120	Msa0306300	0.814936	1.195049e-51	-8.615850e-47
Msa0016120	Msa0308830	0.801283	9.686976e-49	-8.615850e-47
Msa0016120	Msa0322830	0.830791	2.406579e-55	-8.615850e-47
Msa0016120	Msa0322840	0.840143	1.038258e-57	-8.615850e-47
Msa0016120	Msa0322860	0.808921	2.442073e-50	-8.615850e-47
Msa0016120	Msa0323610	0.801779	7.663097e-49	-8.615850e-47
Msa0016120	Msa0329620	0.854653	1.066328e-61	-8.615850e-47
Msa0016120	Msa0337850	0.831110	2.010054e-55	-8.615850e-47
Msa0016120	Msa0359250	0.838866	2.229364e-57	-8.615850e-47
Msa0016120	Msa0362780	0.817680	2.907941e-52	-8.615850e-47
Msa0016120	Msa0370600	0.826518	2.595994e-54	-8.615850e-47
Msa0016120	Msa0378500	0.810732	9.958287e-51	-8.615850e-47
Msa0016120	Msa0392420	0.809597	1.749464e-50	-8.615850e-47
Msa0016120	Msa0392460	0.803073	4.148709e-49	-8.615850e-47
Msa0016120	Msa0406000	0.841838	3.726608e-58	-8.615850e-47
Msa0016120	Msa0418200	0.835987	1.218676e-56	-8.615850e-47
Msa0016120	Msa0419970	0.808279	3.349360e-50	-8.615850e-47
Msa0016120	Msa0436500	0.845742	3.358986e-59	-8.615850e-47
Msa0016120	Msa0444010	0.808427	3.114454e-50	-8.615850e-47
Msa0016120	Msa0451400	0.850880	1.275749e-60	-8.615850e-47
Msa0016120	Msa0464540	0.828790	7.392341e-55	-8.615850e-47
Msa0016120	Msa0487570	0.814050	1.876814e-51	-8.615850e-47
Msa0016120	Msa0487630	0.806257	8.979226e-50	-8.615850e-47
Msa0016120	Msa0492190	0.828793	7.379266e-55	-8.615850e-47
Msa0016120	Msa0503580	0.806480	8.060872e-50	-8.615850e-47
Msa0016120	Msa0535040	0.842159	3.065278e-58	-8.615850e-47
Msa0016120	Msa0537920	0.821492	3.924259e-53	-8.615850e-47
Msa0016120	Msa0538220	0.827822	1.264885e-54	-8.615850e-47
Msa0016120	Msa0591790	0.814309	1.644904e-51	-8.615850e-47
Msa0016120	Msa0594090	0.825677	4.114371e-54	-8.615850e-47
Msa0016120	Msa0641250	0.821597	3.710274e-53	-8.615850e-47
Msa0016120	Msa0641360	0.811047	8.509426e-51	-8.615850e-47
Msa0016120	Msa0663680	0.802016	6.850753e-49	-8.615850e-47
Msa0016120	Msa0669840	0.842411	2.629368e-58	-8.615850e-47
Msa0016120	Msa0680150	0.816632	5.002814e-52	-8.615850e-47
Msa0016120	Msa0685330	0.814582	1.431994e-51	-8.615850e-47
Msa0016120	Msa0688500	0.807098	5.965796e-50	-8.615850e-47
Msa0016120	Msa0691160	0.820076	8.304560e-53	-8.615850e-47
Msa0016120	Msa0707220	0.832500	9.122877e-56	-8.615850e-47
Msa0016120	Msa0737190	0.806553	7.779354e-50	-8.615850e-47
Msa0016120	Msa0739580	0.839664	1.384345e-57	-8.615850e-47
Msa0016120	Msa0747780	0.837908	3.936702e-57	-8.615850e-47
Msa0016120	Msa0748000	0.801798	7.595906e-49	-8.615850e-47
Msa0016120	Msa0754030	0.807966	3.903765e-50	-8.615850e-47
Msa0016120	Msa0761580	0.806964	6.368666e-50	-8.615850e-47
Msa0016120	Msa0764820	0.800728	1.257506e-48	-8.615850e-47
Msa0016120	Msa0778930	0.801826	7.495184e-49	-8.615850e-47
Msa0016120	Msa0782360	0.830017	3.721216e-55	-8.615850e-47
Msa0016120	Msa0807110	0.810320	1.222125e-50	-8.615850e-47
Msa0016120	Msa0823400	0.805548	1.265888e-49	-8.615850e-47
Msa0016120	Msa0828830	0.949896	5.013853e-108	-8.615850e-47
Msa0016120	Msa0833040	0.819782	9.693783e-53	-8.615850e-47
Msa0016120	Msa0860280	0.846541	2.036477e-59	-8.615850e-47
Msa0016120	Msa0867350	0.854218	1.425340e-61	-8.615850e-47
Msa0016120	Msa0872310	0.822620	2.149308e-53	-8.615850e-47
Msa0016120	Msa0880140	0.806565	7.733421e-50	-8.615850e-47
Msa0016120	Msa0880440	0.802680	5.001065e-49	-8.615850e-47
Msa0016120	Msa0885060	0.835512	1.607583e-56	-8.615850e-47
Msa0016120	Msa0898730	0.847988	8.162896e-60	-8.615850e-47
Msa0016120	Msa0905550	0.831573	1.546644e-55	-8.615850e-47
Msa0016120	Msa0911990	0.820674	6.054665e-53	-8.615850e-47
Msa0016120	Msa0929870	0.812649	3.811819e-51	-8.615850e-47
Msa0016120	Msa0936410	0.809612	1.736248e-50	-8.615850e-47
Msa0016120	Msa0937550	0.824897	6.291934e-54	-8.615850e-47
Msa0016120	Msa0973250	0.805208	1.491694e-49	-8.615850e-47
Msa0016120	Msa0974750	0.800093	1.694362e-48	-8.615850e-47
Msa0016120	Msa0999300	0.852240	5.257727e-61	-8.615850e-47
Msa0016120	Msa0999360	0.819167	1.339039e-52	-8.615850e-47
Msa0016120	Msa0999410	0.804932	1.703779e-49	-8.615850e-47
Msa0016120	Msa1001890	0.814026	1.899722e-51	-8.615850e-47
Msa0016120	Msa1007870	0.801139	1.036728e-48	-8.615850e-47
Msa0016120	Msa1009000	0.813151	2.958645e-51	-8.615850e-47
Msa0016120	Msa1014270	0.818848	1.582147e-52	-8.615850e-47
Msa0016120	Msa1016600	0.813138	2.979004e-51	-8.615850e-47
Msa0016120	Msa1037900	0.824110	9.638084e-54	-8.615850e-47
Msa0016120	Msa1037910	0.813125	2.999203e-51	-8.615850e-47
Msa0016120	Msa1041530	0.852124	5.669525e-61	-8.615850e-47
Msa0016120	Msa1042670	0.818634	1.769483e-52	-8.615850e-47
Msa0016120	Msa1055260	0.823144	1.621967e-53	-8.615850e-47
Msa0016120	Msa1055280	0.833240	5.973578e-56	-8.615850e-47
Msa0016120	Msa1077180	0.800561	1.360086e-48	-8.615850e-47
Msa0016120	Msa1081570	0.851974	6.253929e-61	-8.615850e-47
Msa0016120	Msa1123880	0.824131	9.529836e-54	-8.615850e-47
Msa0016120	Msa1127140	0.860733	1.680837e-63	-8.615850e-47
Msa0016120	Msa1127950	0.806140	9.504296e-50	-8.615850e-47
Msa0016120	Msa1129960	0.822650	2.114457e-53	-8.615850e-47
Msa0016120	Msa1129970	0.805730	1.159354e-49	-8.615850e-47
Msa0016120	Msa1145020	0.852372	4.821544e-61	-8.615850e-47
Msa0016120	Msa1166400	0.852289	5.091338e-61	-8.615850e-47
Msa0016120	Msa1176160	0.834924	2.262411e-56	-8.615850e-47
Msa0016120	Msa1179280	0.805405	1.356024e-49	-8.615850e-47
Msa0016120	Msa1196080	0.801535	8.602008e-49	-8.615850e-47
Msa0016120	Msa1200440	0.848473	5.994643e-60	-8.615850e-47
Msa0016120	Msa1201160	0.813840	2.087780e-51	-8.615850e-47
Msa0016120	Msa1228190	0.819692	1.016042e-52	-8.615850e-47
Msa0016120	Msa1233560	0.813456	2.536373e-51	-8.615850e-47
Msa0016120	Msa1271260	0.811791	5.867928e-51	-8.615850e-47
Msa0016120	Msa1293770	0.803363	3.613510e-49	-8.615850e-47
Msa0016120	Msa1296800	0.807168	5.766350e-50	-8.615850e-47
Msa0016120	Msa1305510	0.849363	3.393768e-60	-8.615850e-47
Msa0016120	Msa1307190	0.835870	1.304623e-56	-8.615850e-47
Msa0016120	Msa1351760	0.811848	5.703032e-51	-8.615850e-47
Msa0016120	Msa1355400	0.831316	1.788516e-55	-8.615850e-47
Msa0016120	Msa1374550	0.800974	1.120309e-48	-8.615850e-47
Msa0016120	Msa1379970	0.836932	7.001214e-57	-8.615850e-47
Msa0016120	Msa1394890	0.803053	4.187437e-49	-8.615850e-47
Msa0016120	Msa1406780	0.850264	1.899732e-60	-8.615850e-47
Msa0016120	Msa1408870	0.810443	1.149687e-50	-8.615850e-47
Msa0016120	Msa1414930	0.802758	4.819690e-49	-8.615850e-47
Msa0016120	Msa1420060	0.863054	3.272478e-64	-8.615850e-47
Msa0016120	Msa1421550	0.869978	2.063585e-66	-8.615850e-47
Msa0016120	Msa1423460	0.802110	6.553331e-49	-8.615850e-47
Msa0016120	Msa1431850	0.855944	4.490587e-62	-8.615850e-47
Msa0016120	Msa1455590	0.816847	4.478459e-52	-8.615850e-47
Msa0016120	Msa1460240	0.801103	1.054210e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0016120	MtrunA17_Chr1g0167411	96.729	214	5	1	1	212	1	214	2.37e-152	421
Msa0016120	MtrunA17_Chr1g0187671	90.260	154	15	0	51	204	41	194	4.54e-90	263
Msa0016120	MtrunA17_Chr5g0431211	80.282	142	28	0	53	194	27	168	6.38e-88	258
Msa0016120	MtrunA17_Chr4g0051251	83.704	135	22	0	62	196	45	179	4.79e-87	256
Msa0016120	MtrunA17_Chr7g0261381	74.742	194	48	1	1	193	1	194	7.06e-86	253
Msa0016120	MtrunA17_Chr1g0183761	96.183	131	5	0	63	193	45	175	4.50e-84	248
Msa0016120	MtrunA17_Chr3g0105921	70.760	171	39	2	35	194	3	173	2.31e-76	229
Msa0016120	MtrunA17_Chr2g0325831	71.724	145	41	0	42	186	2	146	3.10e-75	224
Msa0016120	MtrunA17_Chr4g0041141	74.436	133	34	0	54	186	20	152	7.21e-75	223
Msa0016120	MtrunA17_Chr2g0315791	65.644	163	55	1	32	193	1	163	9.95e-74	221
Msa0016120	MtrunA17_Chr2g0283861	72.662	139	38	0	55	193	27	165	5.20e-72	216
Msa0016120	MtrunA17_Chr7g0274631	63.924	158	55	2	38	194	2	158	3.15e-71	214
Msa0016120	MtrunA17_Chr1g0190231	78.378	148	32	0	40	187	17	164	4.67e-71	214
Msa0016120	MtrunA17_Chr8g0379061	72.800	125	34	0	62	186	84	208	7.56e-57	180
Msa0016120	MtrunA17_Chr1g0211641	84.783	46	7	0	56	101	64	109	6.89e-24	91.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0016120	AT2G31160.1	73.684	190	40	1	5	194	6	185	4.60e-88	259
Msa0016120	AT1G07090.1	77.551	147	28	1	49	195	22	163	1.00e-86	254
Msa0016120	AT3G23290.2	95.238	126	6	0	62	187	47	172	5.33e-82	243
Msa0016120	AT5G58500.1	80.741	135	25	1	61	194	17	151	8.27e-82	241
Msa0016120	AT5G28490.1	80.405	148	23	1	45	192	13	154	1.72e-75	226
Msa0016120	AT2G42610.1	77.344	128	29	0	59	186	21	148	9.29e-73	218
Msa0016120	AT2G42610.2	77.344	128	29	0	59	186	21	148	9.29e-73	218
Msa0016120	AT3G04510.1	65.169	178	45	1	15	192	2	162	4.34e-71	215
Msa0016120	AT1G78815.1	62.585	147	55	0	62	208	39	185	9.06e-67	204
Msa0016120	AT4G18610.1	64.138	145	51	1	43	186	17	161	5.03e-64	197
Msa0016120	AT1G16910.1	57.419	155	61	1	37	191	2	151	5.06e-62	191

Find 64 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTCATCATGTCTTTGTTCT+TGG	0.227073	1_1:+26858070	None:intergenic
CACACAAATTTATTACAAAA+TGG	0.255478	1_1:+26856238	None:intergenic
TTGCGTTACCTCGACCAATT+TGG	0.269006	1_1:-26857804	Msa0016120:CDS
TGGATTTGGATGTCCATAAA+AGG	0.277270	1_1:+26857752	None:intergenic
CAAAATGGACCGTGAATAAT+TGG	0.289752	1_1:+26856253	None:intergenic
GTTGTTGTTGATGTTGTTGA+TGG	0.314316	1_1:+26857945	None:intergenic
GGACATGGTGCAGGTGGATT+TGG	0.320133	1_1:+26857738	None:intergenic
GACTTTACCTTCGCGAAGTT+AGG	0.323181	1_1:-26857599	Msa0016120:CDS
GATGATGGGTTTGTTATCAT+AGG	0.327393	1_1:+26858041	None:intergenic
TGAAAATAAATGATAGGGTT+TGG	0.339101	1_1:+26858191	None:intergenic
TATTTGTGAAAATAAATGAT+AGG	0.354121	1_1:+26858185	None:intergenic
AAGCCAGAAGCTAATCCTTT+TGG	0.361490	1_1:-26857636	Msa0016120:CDS
AGAAGAGATTGGAACACATT+TGG	0.367128	1_1:-26857897	Msa0016120:CDS
GTGGTGGTCTATGGTTTCTT+AGG	0.368488	1_1:+26857868	None:intergenic
GGTGGTGGTGGTGGCGGCTG+AGG	0.370057	1_1:+26857519	None:intergenic
ACTTTACCTTCGCGAAGTTA+GGG	0.398859	1_1:-26857598	Msa0016120:CDS
GCACCAAAAGGATTAGCTTC+TGG	0.418214	1_1:+26857633	None:intergenic
GTTGTAGTTGCATTATTTGA+TGG	0.419514	1_1:+26857498	None:intergenic
ATTTGTGAAAATAAATGATA+GGG	0.429262	1_1:+26858186	None:intergenic
TAGTAGCAGCAGTAACTAAA+GGG	0.431809	1_1:-26856291	Msa0016120:three_prime_UTR
GGTAGTCTTGATGCACTCAT+TGG	0.434097	1_1:-26857693	Msa0016120:CDS
AGAATCAAAAGAGAAGAGAT+TGG	0.459394	1_1:-26857908	Msa0016120:CDS
CTTGTCCTCTTCGCCAAGCG+TGG	0.459831	1_1:-26857716	Msa0016120:CDS
GGTGGTGGTGGCGGCTGAGG+CGG	0.465046	1_1:+26857522	None:intergenic
GTAGTAGCAGCAGTAACTAA+AGG	0.470487	1_1:-26856292	Msa0016120:three_prime_UTR
GCATTATTTGATGGTGGTGG+TGG	0.471088	1_1:+26857507	None:intergenic
GAAGAGAATTCATTGTTACT+TGG	0.472778	1_1:+26858111	None:intergenic
ATGGAAACTGCAGTGAAAGC+TGG	0.474521	1_1:-26856363	Msa0016120:three_prime_UTR
ATGATGGGTTTGTTATCATA+GGG	0.482921	1_1:+26858042	None:intergenic
TTATTTGATGGTGGTGGTGG+TGG	0.487231	1_1:+26857510	None:intergenic
TTGTCCTCTTCGCCAAGCGT+GGG	0.488923	1_1:-26857715	Msa0016120:CDS
CGAGGTAACGCAAGAATTCA+AGG	0.492274	1_1:+26857814	None:intergenic
AGAGTGAAAGTGGTGGTCTA+TGG	0.493036	1_1:+26857859	None:intergenic
ATAAATTTGTGTGTACTTGA+AGG	0.495736	1_1:-26856228	Msa0016120:three_prime_UTR
GTAGTCTTGATGCACTCATT+GGG	0.507513	1_1:-26857692	Msa0016120:CDS
TTTGTGTGACCAATTATTCA+CGG	0.508487	1_1:-26856262	Msa0016120:three_prime_UTR
TGATGTTGTTGTTGTGGACG+AGG	0.511739	1_1:+26857971	None:intergenic
GTTGCATTATTTGATGGTGG+TGG	0.513644	1_1:+26857504	None:intergenic
CGAACAGCACGAGCACCAAA+AGG	0.514487	1_1:+26857621	None:intergenic
TGGAAACTGCAGTGAAAGCT+GGG	0.516292	1_1:-26856362	Msa0016120:three_prime_UTR
TGGAGGTGATGTTGTTGTTG+TGG	0.519070	1_1:+26857965	None:intergenic
CACGCTTGGCGAAGAGGACA+AGG	0.527749	1_1:+26857717	None:intergenic
GTTGTTGATGTTGTTGATGG+AGG	0.529776	1_1:+26857948	None:intergenic
CTTTCACTCTCACGTTGTAG+TGG	0.531680	1_1:-26857846	Msa0016120:CDS
GGATTTGGATGTCCATAAAA+GGG	0.532805	1_1:+26857753	None:intergenic
CATCAAGACTACCCCACGCT+TGG	0.543485	1_1:+26857703	None:intergenic
GTAGTTGCATTATTTGATGG+TGG	0.544780	1_1:+26857501	None:intergenic
GTCATCGTCATGGATGATGA+TGG	0.559458	1_1:+26858026	None:intergenic
AGAGGACAAGGACATGGTGC+AGG	0.565916	1_1:+26857729	None:intergenic
CTACCCCACGCTTGGCGAAG+AGG	0.567363	1_1:+26857711	None:intergenic
CTACAACGTGAGAGTGAAAG+TGG	0.580478	1_1:+26857849	None:intergenic
GGACAAGGACATGGTGCAGG+TGG	0.588264	1_1:+26857732	None:intergenic
TGTTGTAGATGATGATGGTA+TGG	0.601682	1_1:+26858004	None:intergenic
GCTGATGTTGTAGATGATGA+TGG	0.601848	1_1:+26857999	None:intergenic
TGTCCTCTTCGCCAAGCGTG+GGG	0.612011	1_1:-26857714	Msa0016120:CDS
TGGCGAAGAGGACAAGGACA+TGG	0.629659	1_1:+26857723	None:intergenic
GAAGTCTTGAGATCAGTACA+TGG	0.630606	1_1:-26856410	Msa0016120:three_prime_UTR
TGATGGTATGGTCATCGTCA+TGG	0.630871	1_1:+26858016	None:intergenic
GATTCTCAAGCTAAAGCTAG+AGG	0.638819	1_1:-26857576	Msa0016120:CDS
GAGAATCCCTAACTTCGCGA+AGG	0.649287	1_1:+26857592	None:intergenic
TCATCGTCATGGATGATGAT+GGG	0.650264	1_1:+26858027	None:intergenic
CTGCAGTGTGAGATATGCAA+TGG	0.653802	1_1:-26856382	Msa0016120:three_prime_UTR
AAGTCTTGAGATCAGTACAT+GGG	0.676097	1_1:-26856409	Msa0016120:three_prime_UTR
CAACGTGAGAGTGAAAGTGG+TGG	0.746060	1_1:+26857852	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTGTGAAAATAAATGATA+GGG	+	chr1_1:26856241-26856260	None:intergenic	15.0%
!!	TATTTGTGAAAATAAATGAT+AGG	+	chr1_1:26856242-26856261	None:intergenic	15.0%
!!!	CAAACTTTTTTAATAAGAAT+AGG	+	chr1_1:26857252-26857271	None:intergenic	15.0%
!!!	TGACTACAATATTTTTTTTA+AGG	+	chr1_1:26857757-26857776	None:intergenic	15.0%
!!!	ATATGTATGCATATATTTTA+GGG	+	chr1_1:26857951-26857970	None:intergenic	15.0%
!!!	TATATGTATGCATATATTTT+AGG	+	chr1_1:26857952-26857971	None:intergenic	15.0%
!!	AACAAATTATAAACAAAGAA+TGG	+	chr1_1:26857986-26858005	None:intergenic	15.0%
!!!	TTTCATGTCTTTTTTATAAA+CGG	-	chr1_1:26858259-26858278	Msa0016120:five_prime_UTR	15.0%
!!	ATTTGTGAAAATAAATGATA+GGG	+	chr1_1:26856241-26856260	None:intergenic	15.0%
!!	TATTTGTGAAAATAAATGAT+AGG	+	chr1_1:26856242-26856261	None:intergenic	15.0%
!!!	CAAACTTTTTTAATAAGAAT+AGG	+	chr1_1:26857252-26857271	None:intergenic	15.0%
!!!	TGACTACAATATTTTTTTTA+AGG	+	chr1_1:26857757-26857776	None:intergenic	15.0%
!!!	ATATGTATGCATATATTTTA+GGG	+	chr1_1:26857951-26857970	None:intergenic	15.0%
!!!	TATATGTATGCATATATTTT+AGG	+	chr1_1:26857952-26857971	None:intergenic	15.0%
!!	AACAAATTATAAACAAAGAA+TGG	+	chr1_1:26857986-26858005	None:intergenic	15.0%
!!!	TTTCATGTCTTTTTTATAAA+CGG	-	chr1_1:26858259-26858278	Msa0016120:five_prime_UTR	15.0%
!!!	TCTTTTTCCTAAATTTTTCT+TGG	-	chr1_1:26856185-26856204	Msa0016120:three_prime_UTR	20.0%
!!	CAATCTCTATATATTATAGT+AGG	-	chr1_1:26857048-26857067	Msa0016120:intron	20.0%
!!	AAAAAAGAAATAATTTGAGC+TGG	-	chr1_1:26857138-26857157	Msa0016120:intron	20.0%
!!	AAAAAGAAATAATTTGAGCT+GGG	-	chr1_1:26857139-26857158	Msa0016120:intron	20.0%
!!!	TAAAAAGAGTTAGCTTTAAT+AGG	-	chr1_1:26857380-26857399	Msa0016120:intron	20.0%
!!	TCTATAAAAGAAAATTACAC+AGG	+	chr1_1:26857861-26857880	None:intergenic	20.0%
!!!	CTTTTATAGATAATTCATCA+AGG	-	chr1_1:26857871-26857890	Msa0016120:CDS	20.0%
!!	CACACAAATTTATTACAAAA+TGG	+	chr1_1:26858189-26858208	None:intergenic	20.0%
!!!	TCTTTTTCCTAAATTTTTCT+TGG	-	chr1_1:26856185-26856204	Msa0016120:three_prime_UTR	20.0%
!!	CAATCTCTATATATTATAGT+AGG	-	chr1_1:26857048-26857067	Msa0016120:intron	20.0%
!!	AAAAAAGAAATAATTTGAGC+TGG	-	chr1_1:26857138-26857157	Msa0016120:intron	20.0%
!!	AAAAAGAAATAATTTGAGCT+GGG	-	chr1_1:26857139-26857158	Msa0016120:intron	20.0%
!!!	TAAAAAGAGTTAGCTTTAAT+AGG	-	chr1_1:26857380-26857399	Msa0016120:intron	20.0%
!!	TCTATAAAAGAAAATTACAC+AGG	+	chr1_1:26857861-26857880	None:intergenic	20.0%
!!!	CTTTTATAGATAATTCATCA+AGG	-	chr1_1:26857871-26857890	Msa0016120:CDS	20.0%
!!	CACACAAATTTATTACAAAA+TGG	+	chr1_1:26858189-26858208	None:intergenic	20.0%
!	AGTAGAACCAAGAAAAATTT+AGG	+	chr1_1:26856195-26856214	None:intergenic	25.0%
!	TGAAAATAAATGATAGGGTT+TGG	+	chr1_1:26856236-26856255	None:intergenic	25.0%
!	TTATAGTAGGATGTGATAAT+AGG	-	chr1_1:26857061-26857080	Msa0016120:intron	25.0%
!	TATAGTAGGATGTGATAATA+GGG	-	chr1_1:26857062-26857081	Msa0016120:intron	25.0%
!	ATAGGGATCCAAATATATAT+CGG	-	chr1_1:26857079-26857098	Msa0016120:intron	25.0%
!	TTCATTGACCGATATATATT+TGG	+	chr1_1:26857090-26857109	None:intergenic	25.0%
!	TATATATCGGTCAATGAAAT+AGG	-	chr1_1:26857092-26857111	Msa0016120:intron	25.0%
!	ATATTGAGATTTCCTACATT+GGG	+	chr1_1:26857652-26857671	None:intergenic	25.0%
!	ATAAATTTGTGTGTACTTGA+AGG	-	chr1_1:26858196-26858215	Msa0016120:five_prime_UTR	25.0%
!	AGTAGAACCAAGAAAAATTT+AGG	+	chr1_1:26856195-26856214	None:intergenic	25.0%
!	TGAAAATAAATGATAGGGTT+TGG	+	chr1_1:26856236-26856255	None:intergenic	25.0%
!	TTATAGTAGGATGTGATAAT+AGG	-	chr1_1:26857061-26857080	Msa0016120:intron	25.0%
!	TATAGTAGGATGTGATAATA+GGG	-	chr1_1:26857062-26857081	Msa0016120:intron	25.0%
!	ATAGGGATCCAAATATATAT+CGG	-	chr1_1:26857079-26857098	Msa0016120:intron	25.0%
!	TTCATTGACCGATATATATT+TGG	+	chr1_1:26857090-26857109	None:intergenic	25.0%
!	TATATATCGGTCAATGAAAT+AGG	-	chr1_1:26857092-26857111	Msa0016120:intron	25.0%
!	ATATTGAGATTTCCTACATT+GGG	+	chr1_1:26857652-26857671	None:intergenic	25.0%
!	ATAAATTTGTGTGTACTTGA+AGG	-	chr1_1:26858196-26858215	Msa0016120:five_prime_UTR	25.0%
!!	TTTTTCTGATCTAGCTTGAT+TGG	+	chr1_1:26856276-26856295	None:intergenic	30.0%
	GAAGAGAATTCATTGTTACT+TGG	+	chr1_1:26856316-26856335	None:intergenic	30.0%
!!	ATGATGGGTTTGTTATCATA+GGG	+	chr1_1:26856385-26856404	None:intergenic	30.0%
!!	TTTTGATTCTCGTATCTACT+TGG	+	chr1_1:26856506-26856525	None:intergenic	30.0%
	AGAATCAAAAGAGAAGAGAT+TGG	-	chr1_1:26856516-26856535	Msa0016120:intron	30.0%
!!!	GAACCTTTGTTTTTCCAAAT+TGG	+	chr1_1:26856637-26856656	None:intergenic	30.0%
	GTTGTAGTTGCATTATTTGA+TGG	+	chr1_1:26856929-26856948	None:intergenic	30.0%
	TAAGAGATACTCGGAAAATT+TGG	+	chr1_1:26857332-26857351	None:intergenic	30.0%
!	AAGAGAGTATAAGAGATACT+CGG	+	chr1_1:26857341-26857360	None:intergenic	30.0%
!	ATAGATACAAGGGTGTAAAT+AGG	-	chr1_1:26857429-26857448	Msa0016120:intron	30.0%
	TATTGAGATTTCCTACATTG+GGG	+	chr1_1:26857651-26857670	None:intergenic	30.0%
	CATATTGAGATTTCCTACAT+TGG	+	chr1_1:26857653-26857672	None:intergenic	30.0%
	TTTGTGTGACCAATTATTCA+CGG	-	chr1_1:26858162-26858181	Msa0016120:five_prime_UTR	30.0%
!!	TTTTTCTGATCTAGCTTGAT+TGG	+	chr1_1:26856276-26856295	None:intergenic	30.0%
	GAAGAGAATTCATTGTTACT+TGG	+	chr1_1:26856316-26856335	None:intergenic	30.0%
!!	ATGATGGGTTTGTTATCATA+GGG	+	chr1_1:26856385-26856404	None:intergenic	30.0%
!!	TTTTGATTCTCGTATCTACT+TGG	+	chr1_1:26856506-26856525	None:intergenic	30.0%
	AGAATCAAAAGAGAAGAGAT+TGG	-	chr1_1:26856516-26856535	Msa0016120:intron	30.0%
!!!	GAACCTTTGTTTTTCCAAAT+TGG	+	chr1_1:26856637-26856656	None:intergenic	30.0%
	GTTGTAGTTGCATTATTTGA+TGG	+	chr1_1:26856929-26856948	None:intergenic	30.0%
	TAAGAGATACTCGGAAAATT+TGG	+	chr1_1:26857332-26857351	None:intergenic	30.0%
!	AAGAGAGTATAAGAGATACT+CGG	+	chr1_1:26857341-26857360	None:intergenic	30.0%
!	ATAGATACAAGGGTGTAAAT+AGG	-	chr1_1:26857429-26857448	Msa0016120:intron	30.0%
	TATTGAGATTTCCTACATTG+GGG	+	chr1_1:26857651-26857670	None:intergenic	30.0%
	CATATTGAGATTTCCTACAT+TGG	+	chr1_1:26857653-26857672	None:intergenic	30.0%
	TTTGTGTGACCAATTATTCA+CGG	-	chr1_1:26858162-26858181	Msa0016120:five_prime_UTR	30.0%
!!!	TTTGGTTTTAGAAGCTTGGT+AGG	+	chr1_1:26856218-26856237	None:intergenic	35.0%
	GTTCATCATGTCTTTGTTCT+TGG	+	chr1_1:26856357-26856376	None:intergenic	35.0%
!!	GATGATGGGTTTGTTATCAT+AGG	+	chr1_1:26856386-26856405	None:intergenic	35.0%
!!	TGTTGTAGATGATGATGGTA+TGG	+	chr1_1:26856423-26856442	None:intergenic	35.0%
!	GTTGTTGTTGATGTTGTTGA+TGG	+	chr1_1:26856482-26856501	None:intergenic	35.0%
	AGAAGAGATTGGAACACATT+TGG	-	chr1_1:26856527-26856546	Msa0016120:intron	35.0%
!!	TTGTTTTTCCAAATTGGTCG+AGG	+	chr1_1:26856631-26856650	None:intergenic	35.0%
	CGACCAATTTGGAAAAACAA+AGG	-	chr1_1:26856631-26856650	Msa0016120:intron	35.0%
!	ACTCAGATTTGTCCCTTTTA+TGG	-	chr1_1:26856659-26856678	Msa0016120:intron	35.0%
	GGATTTGGATGTCCATAAAA+GGG	+	chr1_1:26856674-26856693	None:intergenic	35.0%
	TGGATTTGGATGTCCATAAA+AGG	+	chr1_1:26856675-26856694	None:intergenic	35.0%
!!!	AGAGCTGCTTTTGAAGAAAA+TGG	-	chr1_1:26856761-26856780	Msa0016120:intron	35.0%
!!	CTGCTTTTGAAGAAAATGGT+GGG	-	chr1_1:26856765-26856784	Msa0016120:intron	35.0%
	GTAGTTGCATTATTTGATGG+TGG	+	chr1_1:26856926-26856945	None:intergenic	35.0%
!	AATGAAATAGGTTGAGCTGT+TGG	-	chr1_1:26857104-26857123	Msa0016120:intron	35.0%
	AAGAAATAATTTGAGCTGGG+AGG	-	chr1_1:26857142-26857161	Msa0016120:intron	35.0%
	AGAAATAATTTGAGCTGGGA+GGG	-	chr1_1:26857143-26857162	Msa0016120:intron	35.0%
	AAATGCGTGCATAGATACAA+GGG	-	chr1_1:26857419-26857438	Msa0016120:intron	35.0%
	TAAATAGGAAATTCTGCCCT+TGG	-	chr1_1:26857444-26857463	Msa0016120:intron	35.0%
!!!	TGAATGCAGGTTTTTTCCAA+GGG	+	chr1_1:26857463-26857482	None:intergenic	35.0%
	GTTAGCATATTGAGAGTCAT+TGG	-	chr1_1:26857487-26857506	Msa0016120:CDS	35.0%
	GAACGGTTCAAAATTCAAGT+CGG	+	chr1_1:26857573-26857592	None:intergenic	35.0%
	GTCATTGGATTGACATTGAA+CGG	+	chr1_1:26857590-26857609	None:intergenic	35.0%
	CAATGTCAATCCAATGACTT+CGG	-	chr1_1:26857592-26857611	Msa0016120:CDS	35.0%
	TCATGAATATCCGAAGTCAT+TGG	+	chr1_1:26857605-26857624	None:intergenic	35.0%
!	CGTCGCGGTTTTTAATATTT+TGG	-	chr1_1:26857709-26857728	Msa0016120:CDS	35.0%
	AAGTCTTGAGATCAGTACAT+GGG	-	chr1_1:26858015-26858034	Msa0016120:CDS	35.0%
	TAGTAGCAGCAGTAACTAAA+GGG	-	chr1_1:26858133-26858152	Msa0016120:five_prime_UTR	35.0%
	CAAAATGGACCGTGAATAAT+TGG	+	chr1_1:26858174-26858193	None:intergenic	35.0%
!!!	TTTGGTTTTAGAAGCTTGGT+AGG	+	chr1_1:26856218-26856237	None:intergenic	35.0%
	GTTCATCATGTCTTTGTTCT+TGG	+	chr1_1:26856357-26856376	None:intergenic	35.0%
!!	GATGATGGGTTTGTTATCAT+AGG	+	chr1_1:26856386-26856405	None:intergenic	35.0%
!!	TGTTGTAGATGATGATGGTA+TGG	+	chr1_1:26856423-26856442	None:intergenic	35.0%
!	GTTGTTGTTGATGTTGTTGA+TGG	+	chr1_1:26856482-26856501	None:intergenic	35.0%
	AGAAGAGATTGGAACACATT+TGG	-	chr1_1:26856527-26856546	Msa0016120:intron	35.0%
!!	TTGTTTTTCCAAATTGGTCG+AGG	+	chr1_1:26856631-26856650	None:intergenic	35.0%
	CGACCAATTTGGAAAAACAA+AGG	-	chr1_1:26856631-26856650	Msa0016120:intron	35.0%
!	ACTCAGATTTGTCCCTTTTA+TGG	-	chr1_1:26856659-26856678	Msa0016120:intron	35.0%
	GGATTTGGATGTCCATAAAA+GGG	+	chr1_1:26856674-26856693	None:intergenic	35.0%
	TGGATTTGGATGTCCATAAA+AGG	+	chr1_1:26856675-26856694	None:intergenic	35.0%
!!!	AGAGCTGCTTTTGAAGAAAA+TGG	-	chr1_1:26856761-26856780	Msa0016120:intron	35.0%
!!	CTGCTTTTGAAGAAAATGGT+GGG	-	chr1_1:26856765-26856784	Msa0016120:intron	35.0%
	GTAGTTGCATTATTTGATGG+TGG	+	chr1_1:26856926-26856945	None:intergenic	35.0%
!	AATGAAATAGGTTGAGCTGT+TGG	-	chr1_1:26857104-26857123	Msa0016120:intron	35.0%
	AAGAAATAATTTGAGCTGGG+AGG	-	chr1_1:26857142-26857161	Msa0016120:intron	35.0%
	AGAAATAATTTGAGCTGGGA+GGG	-	chr1_1:26857143-26857162	Msa0016120:intron	35.0%
	AAATGCGTGCATAGATACAA+GGG	-	chr1_1:26857419-26857438	Msa0016120:intron	35.0%
	TAAATAGGAAATTCTGCCCT+TGG	-	chr1_1:26857444-26857463	Msa0016120:intron	35.0%
!!!	TGAATGCAGGTTTTTTCCAA+GGG	+	chr1_1:26857463-26857482	None:intergenic	35.0%
	GTTAGCATATTGAGAGTCAT+TGG	-	chr1_1:26857487-26857506	Msa0016120:CDS	35.0%
	GAACGGTTCAAAATTCAAGT+CGG	+	chr1_1:26857573-26857592	None:intergenic	35.0%
	GTCATTGGATTGACATTGAA+CGG	+	chr1_1:26857590-26857609	None:intergenic	35.0%
	CAATGTCAATCCAATGACTT+CGG	-	chr1_1:26857592-26857611	Msa0016120:CDS	35.0%
	TCATGAATATCCGAAGTCAT+TGG	+	chr1_1:26857605-26857624	None:intergenic	35.0%
!	CGTCGCGGTTTTTAATATTT+TGG	-	chr1_1:26857709-26857728	Msa0016120:CDS	35.0%
	AAGTCTTGAGATCAGTACAT+GGG	-	chr1_1:26858015-26858034	Msa0016120:CDS	35.0%
	TAGTAGCAGCAGTAACTAAA+GGG	-	chr1_1:26858133-26858152	Msa0016120:five_prime_UTR	35.0%
	CAAAATGGACCGTGAATAAT+TGG	+	chr1_1:26858174-26858193	None:intergenic	35.0%
!!!	AGGGTTTGGTTTTAGAAGCT+TGG	+	chr1_1:26856222-26856241	None:intergenic	40.0%
	TCATCGTCATGGATGATGAT+GGG	+	chr1_1:26856400-26856419	None:intergenic	40.0%
	GCTGATGTTGTAGATGATGA+TGG	+	chr1_1:26856428-26856447	None:intergenic	40.0%
!	GTTGTTGATGTTGTTGATGG+AGG	+	chr1_1:26856479-26856498	None:intergenic	40.0%
!	GTAGTCTTGATGCACTCATT+GGG	-	chr1_1:26856732-26856751	Msa0016120:intron	40.0%
!!!	GCTGCTTTTGAAGAAAATGG+TGG	-	chr1_1:26856764-26856783	Msa0016120:intron	40.0%
!	AAGCCAGAAGCTAATCCTTT+TGG	-	chr1_1:26856788-26856807	Msa0016120:intron	40.0%
	ACTTTACCTTCGCGAAGTTA+GGG	-	chr1_1:26856826-26856845	Msa0016120:intron	40.0%
	GATTCTCAAGCTAAAGCTAG+AGG	-	chr1_1:26856848-26856867	Msa0016120:intron	40.0%
!!	GTTGCATTATTTGATGGTGG+TGG	+	chr1_1:26856923-26856942	None:intergenic	40.0%
!	AGCTTGCTTCACAAACTCTT+TGG	+	chr1_1:26857169-26857188	None:intergenic	40.0%
	AGAGTTTGTGAAGCAAGCTA+AGG	-	chr1_1:26857170-26857189	Msa0016120:intron	40.0%
	GAGTTTGTGAAGCAAGCTAA+GGG	-	chr1_1:26857171-26857190	Msa0016120:intron	40.0%
	CAAATGCGTGCATAGATACA+AGG	-	chr1_1:26857418-26857437	Msa0016120:intron	40.0%
!!!	GTGAATGCAGGTTTTTTCCA+AGG	+	chr1_1:26857464-26857483	None:intergenic	40.0%
	GAAGTCTTGAGATCAGTACA+TGG	-	chr1_1:26858014-26858033	Msa0016120:CDS	40.0%
	GTAGTAGCAGCAGTAACTAA+AGG	-	chr1_1:26858132-26858151	Msa0016120:five_prime_UTR	40.0%
!!!	AGGGTTTGGTTTTAGAAGCT+TGG	+	chr1_1:26856222-26856241	None:intergenic	40.0%
	TCATCGTCATGGATGATGAT+GGG	+	chr1_1:26856400-26856419	None:intergenic	40.0%
	GCTGATGTTGTAGATGATGA+TGG	+	chr1_1:26856428-26856447	None:intergenic	40.0%
!	GTTGTTGATGTTGTTGATGG+AGG	+	chr1_1:26856479-26856498	None:intergenic	40.0%
!	GTAGTCTTGATGCACTCATT+GGG	-	chr1_1:26856732-26856751	Msa0016120:intron	40.0%
!!!	GCTGCTTTTGAAGAAAATGG+TGG	-	chr1_1:26856764-26856783	Msa0016120:intron	40.0%
!	AAGCCAGAAGCTAATCCTTT+TGG	-	chr1_1:26856788-26856807	Msa0016120:intron	40.0%
	ACTTTACCTTCGCGAAGTTA+GGG	-	chr1_1:26856826-26856845	Msa0016120:intron	40.0%
	GATTCTCAAGCTAAAGCTAG+AGG	-	chr1_1:26856848-26856867	Msa0016120:intron	40.0%
!!	GTTGCATTATTTGATGGTGG+TGG	+	chr1_1:26856923-26856942	None:intergenic	40.0%
!	AGCTTGCTTCACAAACTCTT+TGG	+	chr1_1:26857169-26857188	None:intergenic	40.0%
	AGAGTTTGTGAAGCAAGCTA+AGG	-	chr1_1:26857170-26857189	Msa0016120:intron	40.0%
	GAGTTTGTGAAGCAAGCTAA+GGG	-	chr1_1:26857171-26857190	Msa0016120:intron	40.0%
	CAAATGCGTGCATAGATACA+AGG	-	chr1_1:26857418-26857437	Msa0016120:intron	40.0%
!!!	GTGAATGCAGGTTTTTTCCA+AGG	+	chr1_1:26857464-26857483	None:intergenic	40.0%
	GAAGTCTTGAGATCAGTACA+TGG	-	chr1_1:26858014-26858033	Msa0016120:CDS	40.0%
	GTAGTAGCAGCAGTAACTAA+AGG	-	chr1_1:26858132-26858151	Msa0016120:five_prime_UTR	40.0%
	GTCATCGTCATGGATGATGA+TGG	+	chr1_1:26856401-26856420	None:intergenic	45.0%
	TGATGGTATGGTCATCGTCA+TGG	+	chr1_1:26856411-26856430	None:intergenic	45.0%
!	TGATGTTGTTGTTGTGGACG+AGG	+	chr1_1:26856456-26856475	None:intergenic	45.0%
!	TGGAGGTGATGTTGTTGTTG+TGG	+	chr1_1:26856462-26856481	None:intergenic	45.0%
	GTGGTGGTCTATGGTTTCTT+AGG	+	chr1_1:26856559-26856578	None:intergenic	45.0%
	AGAGTGAAAGTGGTGGTCTA+TGG	+	chr1_1:26856568-26856587	None:intergenic	45.0%
	CTACAACGTGAGAGTGAAAG+TGG	+	chr1_1:26856578-26856597	None:intergenic	45.0%
	CTTTCACTCTCACGTTGTAG+TGG	-	chr1_1:26856578-26856597	Msa0016120:intron	45.0%
	CGAGGTAACGCAAGAATTCA+AGG	+	chr1_1:26856613-26856632	None:intergenic	45.0%
	TTGCGTTACCTCGACCAATT+TGG	-	chr1_1:26856620-26856639	Msa0016120:intron	45.0%
!	GGTAGTCTTGATGCACTCAT+TGG	-	chr1_1:26856731-26856750	Msa0016120:intron	45.0%
!!	GCACCAAAAGGATTAGCTTC+TGG	+	chr1_1:26856794-26856813	None:intergenic	45.0%
	GACTTTACCTTCGCGAAGTT+AGG	-	chr1_1:26856825-26856844	Msa0016120:intron	45.0%
!!	TTATTTGATGGTGGTGGTGG+TGG	+	chr1_1:26856917-26856936	None:intergenic	45.0%
!!	GCATTATTTGATGGTGGTGG+TGG	+	chr1_1:26856920-26856939	None:intergenic	45.0%
!	GAAATAGGTTGAGCTGTTGG+TGG	-	chr1_1:26857107-26857126	Msa0016120:intron	45.0%
	TATGCTAACAGCGTGAATGC+AGG	+	chr1_1:26857476-26857495	None:intergenic	45.0%
	CCACAAGATGTAGTTGCGAT+TGG	+	chr1_1:26857800-26857819	None:intergenic	45.0%
	CCAATCGCAACTACATCTTG+TGG	-	chr1_1:26857797-26857816	Msa0016120:CDS	45.0%
	ACACAGGAGTGAAAGACAAG+CGG	+	chr1_1:26857845-26857864	None:intergenic	45.0%
	CTGCAGTGTGAGATATGCAA+TGG	-	chr1_1:26858042-26858061	Msa0016120:CDS	45.0%
	ATGGAAACTGCAGTGAAAGC+TGG	-	chr1_1:26858061-26858080	Msa0016120:CDS	45.0%
	TGGAAACTGCAGTGAAAGCT+GGG	-	chr1_1:26858062-26858081	Msa0016120:CDS	45.0%
	GTCATCGTCATGGATGATGA+TGG	+	chr1_1:26856401-26856420	None:intergenic	45.0%
	TGATGGTATGGTCATCGTCA+TGG	+	chr1_1:26856411-26856430	None:intergenic	45.0%
!	TGATGTTGTTGTTGTGGACG+AGG	+	chr1_1:26856456-26856475	None:intergenic	45.0%
!	TGGAGGTGATGTTGTTGTTG+TGG	+	chr1_1:26856462-26856481	None:intergenic	45.0%
	GTGGTGGTCTATGGTTTCTT+AGG	+	chr1_1:26856559-26856578	None:intergenic	45.0%
	AGAGTGAAAGTGGTGGTCTA+TGG	+	chr1_1:26856568-26856587	None:intergenic	45.0%
	CTACAACGTGAGAGTGAAAG+TGG	+	chr1_1:26856578-26856597	None:intergenic	45.0%
	CTTTCACTCTCACGTTGTAG+TGG	-	chr1_1:26856578-26856597	Msa0016120:intron	45.0%
	CGAGGTAACGCAAGAATTCA+AGG	+	chr1_1:26856613-26856632	None:intergenic	45.0%
	TTGCGTTACCTCGACCAATT+TGG	-	chr1_1:26856620-26856639	Msa0016120:intron	45.0%
!	GGTAGTCTTGATGCACTCAT+TGG	-	chr1_1:26856731-26856750	Msa0016120:intron	45.0%
!!	GCACCAAAAGGATTAGCTTC+TGG	+	chr1_1:26856794-26856813	None:intergenic	45.0%
	GACTTTACCTTCGCGAAGTT+AGG	-	chr1_1:26856825-26856844	Msa0016120:intron	45.0%
!!	TTATTTGATGGTGGTGGTGG+TGG	+	chr1_1:26856917-26856936	None:intergenic	45.0%
!!	GCATTATTTGATGGTGGTGG+TGG	+	chr1_1:26856920-26856939	None:intergenic	45.0%
!	GAAATAGGTTGAGCTGTTGG+TGG	-	chr1_1:26857107-26857126	Msa0016120:intron	45.0%
	TATGCTAACAGCGTGAATGC+AGG	+	chr1_1:26857476-26857495	None:intergenic	45.0%
	CCACAAGATGTAGTTGCGAT+TGG	+	chr1_1:26857800-26857819	None:intergenic	45.0%
	CCAATCGCAACTACATCTTG+TGG	-	chr1_1:26857797-26857816	Msa0016120:CDS	45.0%
	ACACAGGAGTGAAAGACAAG+CGG	+	chr1_1:26857845-26857864	None:intergenic	45.0%
	CTGCAGTGTGAGATATGCAA+TGG	-	chr1_1:26858042-26858061	Msa0016120:CDS	45.0%
	ATGGAAACTGCAGTGAAAGC+TGG	-	chr1_1:26858061-26858080	Msa0016120:CDS	45.0%
	TGGAAACTGCAGTGAAAGCT+GGG	-	chr1_1:26858062-26858081	Msa0016120:CDS	45.0%
	CAACGTGAGAGTGAAAGTGG+TGG	+	chr1_1:26856575-26856594	None:intergenic	50.0%
	GAGAATCCCTAACTTCGCGA+AGG	+	chr1_1:26856835-26856854	None:intergenic	50.0%
!	TGCGAGCTTTTCCCCAATGT+AGG	-	chr1_1:26857637-26857656	Msa0016120:CDS	50.0%
	TAACAACTGCAACTGCGTCG+CGG	-	chr1_1:26857694-26857713	Msa0016120:CDS	50.0%
	CAACGTGAGAGTGAAAGTGG+TGG	+	chr1_1:26856575-26856594	None:intergenic	50.0%
	GAGAATCCCTAACTTCGCGA+AGG	+	chr1_1:26856835-26856854	None:intergenic	50.0%
!	TGCGAGCTTTTCCCCAATGT+AGG	-	chr1_1:26857637-26857656	Msa0016120:CDS	50.0%
	TAACAACTGCAACTGCGTCG+CGG	-	chr1_1:26857694-26857713	Msa0016120:CDS	50.0%
!	GGACATGGTGCAGGTGGATT+TGG	+	chr1_1:26856689-26856708	None:intergenic	55.0%
	AGAGGACAAGGACATGGTGC+AGG	+	chr1_1:26856698-26856717	None:intergenic	55.0%
	TGGCGAAGAGGACAAGGACA+TGG	+	chr1_1:26856704-26856723	None:intergenic	55.0%
	TTGTCCTCTTCGCCAAGCGT+GGG	-	chr1_1:26856709-26856728	Msa0016120:intron	55.0%
	CATCAAGACTACCCCACGCT+TGG	+	chr1_1:26856724-26856743	None:intergenic	55.0%
	CGAACAGCACGAGCACCAAA+AGG	+	chr1_1:26856806-26856825	None:intergenic	55.0%
!!	TTTGATGGTGGTGGTGGTGG+CGG	+	chr1_1:26856914-26856933	None:intergenic	55.0%
!	GGACATGGTGCAGGTGGATT+TGG	+	chr1_1:26856689-26856708	None:intergenic	55.0%
	AGAGGACAAGGACATGGTGC+AGG	+	chr1_1:26856698-26856717	None:intergenic	55.0%
	TGGCGAAGAGGACAAGGACA+TGG	+	chr1_1:26856704-26856723	None:intergenic	55.0%
	TTGTCCTCTTCGCCAAGCGT+GGG	-	chr1_1:26856709-26856728	Msa0016120:intron	55.0%
	CATCAAGACTACCCCACGCT+TGG	+	chr1_1:26856724-26856743	None:intergenic	55.0%
	CGAACAGCACGAGCACCAAA+AGG	+	chr1_1:26856806-26856825	None:intergenic	55.0%
!!	TTTGATGGTGGTGGTGGTGG+CGG	+	chr1_1:26856914-26856933	None:intergenic	55.0%
	GGACAAGGACATGGTGCAGG+TGG	+	chr1_1:26856695-26856714	None:intergenic	60.0%
	CACGCTTGGCGAAGAGGACA+AGG	+	chr1_1:26856710-26856729	None:intergenic	60.0%
	CTTGTCCTCTTCGCCAAGCG+TGG	-	chr1_1:26856708-26856727	Msa0016120:intron	60.0%
	TGTCCTCTTCGCCAAGCGTG+GGG	-	chr1_1:26856710-26856729	Msa0016120:intron	60.0%
	GGACAAGGACATGGTGCAGG+TGG	+	chr1_1:26856695-26856714	None:intergenic	60.0%
	CACGCTTGGCGAAGAGGACA+AGG	+	chr1_1:26856710-26856729	None:intergenic	60.0%
	CTTGTCCTCTTCGCCAAGCG+TGG	-	chr1_1:26856708-26856727	Msa0016120:intron	60.0%
	TGTCCTCTTCGCCAAGCGTG+GGG	-	chr1_1:26856710-26856729	Msa0016120:intron	60.0%
	CTACCCCACGCTTGGCGAAG+AGG	+	chr1_1:26856716-26856735	None:intergenic	65.0%
	CTACCCCACGCTTGGCGAAG+AGG	+	chr1_1:26856716-26856735	None:intergenic	65.0%
!!	GGTGGTGGTGGCGGCTGAGG+CGG	+	chr1_1:26856905-26856924	None:intergenic	75.0%
!!	GGTGGTGGTGGTGGCGGCTG+AGG	+	chr1_1:26856908-26856927	None:intergenic	75.0%
!!	GGTGGTGGTGGCGGCTGAGG+CGG	+	chr1_1:26856905-26856924	None:intergenic	75.0%
!!	GGTGGTGGTGGTGGCGGCTG+AGG	+	chr1_1:26856908-26856927	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_1	gene	26856155	26858291	26856155	ID=Msa0016120;Name=Msa0016120
chr1_1	mRNA	26856155	26858291	26856155	ID=Msa0016120-mRNA-1;Parent=Msa0016120;Name=Msa0016120-mRNA-1;_AED=0.00;_eAED=0.00;_QI=168\|0\|0.5\|1\|0\|0.5\|2\|277\|212
chr1_1	exon	26856155	26856431	26856155	ID=Msa0016120-mRNA-1:exon:8981;Parent=Msa0016120-mRNA-1
chr1_1	exon	26857485	26858291	26857485	ID=Msa0016120-mRNA-1:exon:8980;Parent=Msa0016120-mRNA-1
chr1_1	five_prime_UTR	26858124	26858291	26858124	ID=Msa0016120-mRNA-1:five_prime_utr;Parent=Msa0016120-mRNA-1
chr1_1	CDS	26857485	26858123	26857485	ID=Msa0016120-mRNA-1:cds;Parent=Msa0016120-mRNA-1
chr1_1	three_prime_UTR	26856155	26856431	26856155	ID=Msa0016120-mRNA-1:three_prime_utr;Parent=Msa0016120-mRNA-1

Gene Sequence

>Msa0016120

ATGAATTCTCTTCAAGAATTTGAATCATCAACCAAGAACAAAGACATGATGAACACAAACCCTATGATAACAAACCCATCATCATCCATGACGATGACCATACCATCATCATCTACAACATCAGCATCATCCTCGTCCACAACAACAACATCACCTCCATCAACAACATCAACAACAACACCAAGTAGATACGAGAATCAAAAGAGAAGAGATTGGAACACATTTGGACAATACCTAAGAAACCATAGACCACCACTTTCACTCTCACGTTGTAGTGGAGCTCATGTCCTTGAATTCTTGCGTTACCTCGACCAATTTGGAAAAACAAAGGTTCACACTCAGATTTGTCCCTTTTATGGACATCCAAATCCACCTGCACCATGTCCTTGTCCTCTTCGCCAAGCGTGGGGTAGTCTTGATGCACTCATTGGGAGACTTAGAGCTGCTTTTGAAGAAAATGGTGGGAAGCCAGAAGCTAATCCTTTTGGTGCTCGTGCTGTTCGACTTTACCTTCGCGAAGTTAGGGATTCTCAAGCTAAAGCTAGAGGTATTAGCTATGAGAAAAAGAAGCGCAAGCGTCCGCCTCAGCCGCCACCACCACCACCATCAAATAATGCAACTACAACTGATCTTCACTAG

Protein sequence

>Msa0016120

MNSLQEFESSTKNKDMMNTNPMITNPSSSMTMTIPSSSTTSASSSSTTTTSPPSTTSTTTPSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTQICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPPQPPPPPPSNNATTTDLH*