AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0766910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0766910 MtrunA17_Chr5g0422391 98.395 997 16 0 1 997 1 997 0.0 1991
Msa0766910 MtrunA17_Chr1g0198861 66.469 1014 287 18 1 996 1 979 0.0 1189
Msa0766910 MtrunA17_Chr1g0151531 52.500 360 148 3 621 977 407 746 1.58e-113 367
Msa0766910 MtrunA17_Chr1g0151531 37.712 236 84 6 126 361 128 300 7.71e-29 124
Msa0766910 MtrunA17_Chr4g0045981 57.353 272 110 3 715 984 346 613 9.89e-99 324
Msa0766910 MtrunA17_Chr4g0069431 46.947 262 139 0 718 979 296 557 9.79e-81 273
Msa0766910 MtrunA17_Chr5g0430701 43.382 272 147 4 707 976 151 417 4.09e-67 232
Msa0766910 MtrunA17_Chr8g0340991 34.095 525 278 14 1 493 24 512 9.44e-61 218
Msa0766910 MtrunA17_Chr2g0330791 33.761 468 273 11 1 453 13 458 3.54e-60 215
Msa0766910 MtrunA17_Chr2g0307341 32.599 454 252 13 110 548 33 447 1.30e-41 161
Msa0766910 MtrunA17_Chr1g0179671 25.781 256 180 3 125 375 98 348 2.77e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0766910 AT3G25690.1 70.039 1018 234 16 1 981 1 984 0.0 1236
Msa0766910 AT3G25690.2 70.039 1018 234 16 1 981 1 984 0.0 1236
Msa0766910 AT3G25690.6 70.039 1018 234 16 1 981 1 984 0.0 1236
Msa0766910 AT3G25690.4 70.039 1018 234 16 1 981 1 984 0.0 1236
Msa0766910 AT3G25690.5 70.059 1012 232 16 7 981 9 986 0.0 1225
Msa0766910 AT3G25690.3 66.132 499 133 9 191 675 53 529 0.0 568
Msa0766910 AT4G18570.1 56.429 280 105 4 715 984 352 624 9.38e-94 311
Msa0766910 AT1G48280.1 46.038 265 143 0 715 979 278 542 6.48e-81 274
Msa0766910 AT1G07120.1 47.529 263 129 5 716 976 128 383 1.08e-71 243
Msa0766910 AT1G52080.2 32.849 551 292 15 1 502 13 534 2.55e-63 225
Msa0766910 AT1G52080.1 32.849 551 292 15 1 502 13 534 2.55e-63 225
Msa0766910 AT4G18570.2 53.846 208 81 3 715 912 352 554 9.46e-63 224
Msa0766910 AT1G07120.2 45.729 199 103 3 716 912 128 323 6.23e-49 177

Find 253 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCCCATTTCTTCAATTTC+TGG 0.106112 5_2:+29323219 None:intergenic
AATTTCACATCTATATTTAT+AGG 0.137988 5_2:+29320001 None:intergenic
TTGCTTAAACAACAAGTTTC+TGG 0.139596 5_2:-29324419 Msa0766910:CDS
ATTTGAAGGAATGCATAATT+TGG 0.162253 5_2:-29325370 Msa0766910:five_prime_UTR
CCCTAGCCATGGCCAATTTA+TGG 0.175617 5_2:+29322868 None:intergenic
AATATAGATGTGAAATTTAA+AGG 0.198079 5_2:-29319995 None:intergenic
CTCCGCTTGCAGAGAATTAA+TGG 0.200637 5_2:+29324574 None:intergenic
TGATGAGTATTCTATGTTTC+TGG 0.205149 5_2:+29320333 None:intergenic
ATTTCACGGTACAGAGAATT+TGG 0.209559 5_2:-29321266 Msa0766910:CDS
TTGCCTTCGCTTGTGATTTC+GGG 0.216812 5_2:+29323408 None:intergenic
CTTGAGGGGCTTGAGGGGTT+TGG 0.222362 5_2:+29320379 None:intergenic
TTTGCCTTCGCTTGTGATTT+CGG 0.223108 5_2:+29323407 None:intergenic
CTAGCAGTATTAGGAGTTTC+AGG 0.254443 5_2:+29323014 None:intergenic
GAATCTTGTAGCCAGTTTAT+TGG 0.264027 5_2:+29321239 None:intergenic
AAAGCAAGAGTTCAGAAGTT+TGG 0.275073 5_2:-29322819 Msa0766910:CDS
AGCAGCTTCACATGAGAGTT+TGG 0.283940 5_2:+29321523 None:intergenic
TTTCAGGCAGTTCTCCAAAA+AGG 0.293704 5_2:-29323151 Msa0766910:CDS
GATAAAAGGTCTTCAAATTC+TGG 0.297145 5_2:+29324851 None:intergenic
ATAAACTGGCTACAAGATTC+TGG 0.304894 5_2:-29321236 Msa0766910:CDS
AATCTTGTAGCCAGTTTATT+GGG 0.305182 5_2:+29321240 None:intergenic
ATATCAAGATCTGATGAAAT+TGG 0.306706 5_2:-29321576 Msa0766910:CDS
AGTAGCATTCACAATATAAT+TGG 0.322575 5_2:+29320185 None:intergenic
AGACCAGCACTAGCAGTATT+AGG 0.325676 5_2:+29323005 None:intergenic
GGCAAACTTTATCTTGCTAA+TGG 0.330666 5_2:+29322647 None:intergenic
CACCAACTTGAGGGGCTTGA+GGG 0.334010 5_2:+29320373 None:intergenic
GTATAAAGATCGCCATAAAT+TGG 0.334328 5_2:-29322880 Msa0766910:CDS
TCTGAACTTGATGCATTATC+TGG 0.340915 5_2:-29320837 Msa0766910:CDS
AAGCAAGAGTTCAGAAGTTT+GGG 0.342986 5_2:-29322818 Msa0766910:CDS
ACTCAATCTCTCCAGATAAA+AGG 0.348637 5_2:+29324837 None:intergenic
ACCCGTTGAAGAAACTAATA+AGG 0.349118 5_2:+29322326 None:intergenic
AAGAACACTAGAATCATCTT+TGG 0.349582 5_2:+29323193 None:intergenic
GAAAGCTGTGAATGATTTAG+AGG 0.350300 5_2:-29324339 Msa0766910:CDS
TAATCCAGAAATTGAAGAAA+TGG 0.351637 5_2:-29323223 Msa0766910:CDS
TTGTCAAAATCTTCACTTCC+TGG 0.354802 5_2:+29323302 None:intergenic
ACCTAAACTTTCTAAAATAA+AGG 0.354901 5_2:-29322736 Msa0766910:CDS
GAGATTGAGTTATCATTTCC+TGG 0.357651 5_2:-29324824 Msa0766910:CDS
TTAGGTGGCAAAGATATATT+AGG 0.357928 5_2:+29322753 None:intergenic
TACTATCATGAAGCTTCTTT+AGG 0.358982 5_2:+29325335 None:intergenic
TGAGTATGAGTGTTAAATCT+AGG 0.365473 5_2:-29323127 Msa0766910:CDS
TCTCTAGCTGGTTCCTTCTC+AGG 0.365817 5_2:+29320813 None:intergenic
AGTGCATCTGCTTTACCTTC+AGG 0.366034 5_2:+29321617 None:intergenic
CCTGCTTTCATCACTGTTGA+AGG 0.369661 5_2:-29325440 Msa0766910:five_prime_UTR
GGAGGAAGAAGAGGAGAAAG+AGG 0.375017 5_2:-29324933 Msa0766910:CDS
ATCAATCTTGTTCCCCTAGC+TGG 0.376302 5_2:-29325776 Msa0766910:five_prime_UTR
ACCTGGTTGCCTTTGTGAAC+TGG 0.376411 5_2:-29322036 Msa0766910:CDS
ATCAAGTGACTCACTAAATT+CGG 0.378484 5_2:-29322970 Msa0766910:CDS
AGGTCTATCTCTTTCGATCT+TGG 0.378644 5_2:+29322773 None:intergenic
GGAGAATTGCTTGAGTACTA+TGG 0.381095 5_2:-29324680 Msa0766910:CDS
CTACAAGATTCTGGAGTTGT+AGG 0.385109 5_2:-29321227 Msa0766910:CDS
AATCCAGAAATTGAAGAAAT+GGG 0.386976 5_2:-29323222 Msa0766910:CDS
TTTCTTTAAATGATATTTGA+AGG 0.398349 5_2:-29325384 Msa0766910:five_prime_UTR
ATGCTAGGAACAACATGATT+GGG 0.399059 5_2:-29322293 Msa0766910:CDS
CTGTCTTGAAGCACTTTGAT+TGG 0.399397 5_2:-29321640 Msa0766910:CDS
TCCTTATTAGTTTCTTCAAC+GGG 0.402713 5_2:-29322327 Msa0766910:CDS
TGATGAAACAGAATCCATTT+AGG 0.403474 5_2:+29325464 None:intergenic
GAACCACCACCTGATGGTTT+AGG 0.405766 5_2:+29322585 None:intergenic
CTGATGACTTGGACATCAAA+TGG 0.411116 5_2:+29322934 None:intergenic
TTGCTGTTGTGGAGCTTAAG+AGG 0.412288 5_2:-29324316 Msa0766910:CDS
TTTGAACTAGCATGAACAAT+TGG 0.413777 5_2:+29322708 None:intergenic
GAGTCTGACCTCTGTCATAT+TGG 0.414337 5_2:+29324214 None:intergenic
GCAGCTTCACATGAGAGTTT+GGG 0.419555 5_2:+29321524 None:intergenic
AGATGAAGAACTTTCCTTCC+TGG 0.419668 5_2:-29322011 Msa0766910:intron
CTTGGAAGAGGCGGTGGAGG+AGG 0.422673 5_2:+29322456 None:intergenic
TTTATCAGAAAGATAGATCA+TGG 0.425184 5_2:-29320027 Msa0766910:three_prime_UTR
GGTCTTCATTTGCGTGTCTC+AGG 0.427743 5_2:+29323588 None:intergenic
GGTCCACCTGGTGGAGGAGG+AGG 0.431071 5_2:+29322480 None:intergenic
CGCTTGAAAGCTTGATGATA+AGG 0.432388 5_2:-29323100 Msa0766910:CDS
AGTGAAGGAATTGGAGGAAA+GGG 0.434864 5_2:-29324717 Msa0766910:CDS
TCACCAACTTGAGGGGCTTG+AGG 0.435017 5_2:+29320372 None:intergenic
CCACCTGGTGGACGAGGAGG+AGG 0.435071 5_2:+29322504 None:intergenic
GTTGGCTAGAAACAAGATAA+AGG 0.435240 5_2:-29324495 Msa0766910:CDS
ATAGTCTTCCTGAGGGTGCC+TGG 0.437629 5_2:+29323459 None:intergenic
GGAAGAGGCGGTGGAGGAGG+CGG 0.438647 5_2:+29322459 None:intergenic
GATGGTTTAGGAGGTGGCCT+TGG 0.439613 5_2:+29322597 None:intergenic
TGGAAGGACTTCAAATGAAT+CGG 0.444993 5_2:-29323553 Msa0766910:CDS
TCTTCACTTCCTGGTGAAGA+AGG 0.445084 5_2:+29323311 None:intergenic
AATTTGGAATCCCAATAAAC+TGG 0.445616 5_2:-29321250 Msa0766910:CDS
GCTTGAGTACTATGGTTTGA+AGG 0.449241 5_2:-29324672 Msa0766910:CDS
GTCCTTCCACTTGCTTCGAC+AGG 0.450079 5_2:+29323567 None:intergenic
GGCGGTCCACCTGGTGGAGG+AGG 0.451744 5_2:+29322477 None:intergenic
CCTGGTGGACGAGGAGGAGG+AGG 0.452241 5_2:+29322507 None:intergenic
CCTCCTCCTCCTCGTCCACC+AGG 0.453292 5_2:-29322507 Msa0766910:CDS
GTAGGCAGCGATGATGATCT+TGG 0.454826 5_2:+29320155 None:intergenic
GGTGGAGGAGGAGGTCCACC+TGG 0.456329 5_2:+29322489 None:intergenic
AAAGAAGCTTCATGATAGTA+AGG 0.457627 5_2:-29325332 Msa0766910:exon
TCGCTTGTGATTTCGGGCTA+AGG 0.462063 5_2:+29323414 None:intergenic
TTTCAATTTCTTGTCAATCT+CGG 0.462137 5_2:+29324358 None:intergenic
CCCTTGACCTCGTTCCGATC+CGG 0.464671 5_2:+29323364 None:intergenic
GATGCTAGGAACAACATGAT+TGG 0.467089 5_2:-29322294 Msa0766910:CDS
CACTTCCTGGTGAAGAAGGA+TGG 0.468336 5_2:+29323315 None:intergenic
CTCTGTCATATTGGAGAGCT+CGG 0.473915 5_2:+29324223 None:intergenic
GGTGGACGAGGAGGAGGAGG+AGG 0.475864 5_2:+29322510 None:intergenic
TATCTTCTTCACCAACTTGA+GGG 0.477737 5_2:+29320364 None:intergenic
GTTGGGTCAATGCATGTTTG+AGG 0.480052 5_2:-29323499 Msa0766910:CDS
AGTGTAGCAATCACCACCTT+TGG 0.482526 5_2:-29323065 Msa0766910:CDS
TTCCTTATTAGTTTCTTCAA+CGG 0.482845 5_2:-29322328 Msa0766910:CDS
GCCATAAATTGGCCATGGCT+AGG 0.484118 5_2:-29322869 Msa0766910:CDS
AACTTAGTAAAAGCTATGTT+AGG 0.484710 5_2:+29325529 None:intergenic
GGAGGTCCACCTGGTGGACG+AGG 0.485982 5_2:+29322498 None:intergenic
AATGAATTATACAGCTGAAA+GGG 0.486041 5_2:+29320258 None:intergenic
TCTTGGACTGCAGAGTGAAA+TGG 0.487052 5_2:-29323639 Msa0766910:intron
GGAGGCGGTCCACCTGGTGG+AGG 0.487730 5_2:+29322474 None:intergenic
TTTGATAGGCCTCTTGGAAG+AGG 0.488859 5_2:+29322444 None:intergenic
GAAAGGGAAGTGAAACTTGA+AGG 0.490463 5_2:-29324701 Msa0766910:CDS
CCTCTTGGAAGAGGCGGTGG+AGG 0.490929 5_2:+29322453 None:intergenic
CTTCTCAGATATTGAAGACC+TGG 0.490941 5_2:-29322053 Msa0766910:CDS
CAGTTAAAACTAACCAGCTA+GGG 0.491494 5_2:+29325763 None:intergenic
GGTGGAGGAGGCGGTCCACC+TGG 0.493163 5_2:+29322468 None:intergenic
CTTCAAGAAGAACTCACAAA+TGG 0.494267 5_2:-29324542 Msa0766910:CDS
CCATAAATTGGCCATGGCTA+GGG 0.494574 5_2:-29322868 Msa0766910:CDS
GGAGGAATGGATGGAGCAGA+TGG 0.495461 5_2:+29322528 None:intergenic
TGATTTAGAGGTTGCTGTTG+TGG 0.499894 5_2:-29324327 Msa0766910:CDS
ACAGTTAAAACTAACCAGCT+AGG 0.501609 5_2:+29325762 None:intergenic
GAGTATGAGTGTTAAATCTA+GGG 0.503061 5_2:-29323126 Msa0766910:CDS
GCGTCAGCTAGTGAAGGAAT+TGG 0.504568 5_2:-29324726 Msa0766910:CDS
ACTGTTAAGCAGCTCAATGT+TGG 0.505956 5_2:-29325273 Msa0766910:CDS
CCTTCAACAGTGATGAAAGC+AGG 0.508083 5_2:+29325440 None:intergenic
AGGCCTCTTGGAAGAGGCGG+TGG 0.508709 5_2:+29322450 None:intergenic
AGAACTCGTATACCTTCGTT+GGG 0.509500 5_2:-29323516 Msa0766910:CDS
GATGAAGCGGGAAGCAAAGA+AGG 0.510423 5_2:-29322358 Msa0766910:CDS
GTTGTTTAAGCAACAAAAGT+TGG 0.511120 5_2:+29324429 None:intergenic
TTCTCCCATCCTTCTTCACC+AGG 0.512217 5_2:-29323320 Msa0766910:CDS
GTACTATGGTTTGAAGGAGC+AGG 0.512565 5_2:-29324666 Msa0766910:CDS
CTTCCAAGAGGCCTATCAAA+AGG 0.513794 5_2:-29322441 Msa0766910:CDS
AAGGTAAAGCAGATGCACTA+AGG 0.515387 5_2:-29321613 Msa0766910:CDS
CTATCTTCTTCACCAACTTG+AGG 0.515694 5_2:+29320363 None:intergenic
AAGAATCACCAGGCACCCTC+AGG 0.516205 5_2:-29323467 Msa0766910:CDS
AAGCACTTTGATTGGCCTGA+AGG 0.517950 5_2:-29321632 Msa0766910:CDS
TACCATTAATTCTCTGCAAG+CGG 0.518242 5_2:-29324576 Msa0766910:CDS
GCAATCACCACCTTTGGTCA+AGG 0.521162 5_2:-29323059 Msa0766910:CDS
ACCAACTTGAGGGGCTTGAG+GGG 0.521386 5_2:+29320374 None:intergenic
GCCGGATCGGAACGAGGTCA+AGG 0.521409 5_2:-29323365 Msa0766910:CDS
ACATTGAGAAAAGGCCTACT+CGG 0.522076 5_2:-29322623 Msa0766910:CDS
CTTGAGGCTAACCAAACAAA+AGG 0.522471 5_2:-29324452 Msa0766910:CDS
GGTGGACCTCCTCCTCCACC+AGG 0.523365 5_2:-29322486 Msa0766910:CDS
AAGAACTCGTATACCTTCGT+TGG 0.526358 5_2:-29323517 Msa0766910:CDS
ATTGACCTTCTCTTGTTCTG+TGG 0.529796 5_2:+29325084 None:intergenic
GGAGAGTGATCTAAAAGAAA+AGG 0.532067 5_2:-29322847 Msa0766910:CDS
GCCAGTTCACAAAGGCAACC+AGG 0.533328 5_2:+29322035 None:intergenic
ATTGTTACGAACAAGAGATA+TGG 0.533942 5_2:-29321291 Msa0766910:CDS
AGCTTCATGATAGTAAGGTT+AGG 0.534874 5_2:-29325327 Msa0766910:exon
AGACGCATCAACTGATGACT+TGG 0.535247 5_2:+29322923 None:intergenic
TTTATCAATCATTGATGAAG+CGG 0.539733 5_2:-29322371 Msa0766910:CDS
AGGCCACCTCCTAAACCATC+AGG 0.539960 5_2:-29322594 Msa0766910:CDS
GCAGATGGTATTCCATTCGC+AGG 0.541589 5_2:+29322543 None:intergenic
GAGCTCGGCAACTCTAGATT+CGG 0.541744 5_2:+29324238 None:intergenic
GCTCAGAACATGGTGAAGAA+AGG 0.542499 5_2:-29325129 Msa0766910:intron
TTGATCCCCTTGACCAAAGG+TGG 0.543107 5_2:+29323052 None:intergenic
AAGTTTAACATACAGCTAAG+AGG 0.544134 5_2:+29322247 None:intergenic
AGTTTGCCGACATTGAGAAA+AGG 0.544849 5_2:-29322632 Msa0766910:CDS
CTAAGAAAACATAATCAAGT+AGG 0.550112 5_2:+29320137 None:intergenic
CCACCTGATGGTTTAGGAGG+TGG 0.550943 5_2:+29322591 None:intergenic
TTATCAATCATTGATGAAGC+GGG 0.551161 5_2:-29322370 Msa0766910:CDS
GGTGGCCTTGGTACCCGAGT+AGG 0.552272 5_2:+29322609 None:intergenic
ACTTCCTGGTGAAGAAGGAT+GGG 0.552850 5_2:+29323316 None:intergenic
TTCTTGATCCCCTTGACCAA+AGG 0.554015 5_2:+29323049 None:intergenic
CAATCACCACCTTTGGTCAA+GGG 0.554925 5_2:-29323058 Msa0766910:CDS
TGCATTATCTGGACCTGAGA+AGG 0.555945 5_2:-29320826 Msa0766910:CDS
AATGGTTGCCAAGGCAAAAG+AGG 0.556783 5_2:-29323621 Msa0766910:CDS
CAAGAGATATGGCTATTTCA+CGG 0.556828 5_2:-29321280 Msa0766910:CDS
CGAGGCCACAGAACAAGAGA+AGG 0.556923 5_2:-29325089 Msa0766910:CDS
CTAGGGGAACAAGATTGATA+AGG 0.558485 5_2:+29325780 None:intergenic
CTTTGATGCAGAGAGCATGA+AGG 0.561581 5_2:-29320427 Msa0766910:CDS
CAAAGTTTATGAAATTGAGA+TGG 0.567396 5_2:-29324777 Msa0766910:CDS
GGTGATTGCTACACTATCAC+TGG 0.567705 5_2:+29323073 None:intergenic
TCGGGCTAAGGTTCTTGCTG+AGG 0.567719 5_2:+29323426 None:intergenic
ATCTTCTTCACCAACTTGAG+GGG 0.568553 5_2:+29320365 None:intergenic
TTACAGATGATTCTTTCGAA+AGG 0.569506 5_2:-29325057 Msa0766910:CDS
GCGCGCTGATAGTCTTCCTG+AGG 0.571719 5_2:+29323451 None:intergenic
TGAAGACCTGTCGAAGCAAG+TGG 0.572018 5_2:-29323573 Msa0766910:CDS
ACCCCTCAAGCCCCTCAAGT+TGG 0.572221 5_2:-29320375 Msa0766910:CDS
CGGGTAACACATCTGATGCT+AGG 0.574445 5_2:-29322308 Msa0766910:CDS
CAGGTCTTCAATATCTGAGA+AGG 0.575182 5_2:+29322054 None:intergenic
TTTCTTCTGTACAACTAGCA+AGG 0.576094 5_2:-29320881 Msa0766910:CDS
GGAGGAGGCGGTCCACCTGG+TGG 0.576132 5_2:+29322471 None:intergenic
TGAAGAAAATAACGATGAGA+AGG 0.577311 5_2:-29324801 Msa0766910:CDS
TTATGGCGATCTTTATACGC+AGG 0.577520 5_2:+29322885 None:intergenic
CTTATCATCAAGCTTTCAAG+CGG 0.578195 5_2:+29323101 None:intergenic
GCAGAGTGAAATGGTTGCCA+AGG 0.582172 5_2:-29323630 Msa0766910:intron
TCAAATGATCAATCTGAGGA+TGG 0.582360 5_2:-29322690 Msa0766910:CDS
CCACCACCTGATGGTTTAGG+AGG 0.582529 5_2:+29322588 None:intergenic
CCGGATCGGAACGAGGTCAA+GGG 0.583503 5_2:-29323364 Msa0766910:CDS
AATCACCACCTTTGGTCAAG+GGG 0.583931 5_2:-29323057 Msa0766910:CDS
GGACCTCCTCCTCCACCAGG+TGG 0.585473 5_2:-29322483 Msa0766910:CDS
AGTTCACCGTGCTCCACAGT+TGG 0.585608 5_2:-29322400 Msa0766910:CDS
TAGATCACTCTCCCTAGCCA+TGG 0.585978 5_2:+29322857 None:intergenic
GGTCCACCTGGTGGACGAGG+AGG 0.586202 5_2:+29322501 None:intergenic
GTCATCAGTTGATGCGTCTG+TGG 0.587342 5_2:-29322919 Msa0766910:CDS
GAATGAATTATACAGCTGAA+AGG 0.587891 5_2:+29320257 None:intergenic
AGGTAAAGCAGATGCACTAA+GGG 0.590443 5_2:-29321612 Msa0766910:CDS
CCTCCACCGCCTCTTCCAAG+AGG 0.592482 5_2:-29322453 Msa0766910:CDS
ACTCCTAATACTGCTAGTGC+TGG 0.594001 5_2:-29323008 Msa0766910:CDS
GTCTTCAATATCTGAGAAGG+AGG 0.596746 5_2:+29322057 None:intergenic
AGAGAGTTCTTGATTCTGCA+AGG 0.596913 5_2:-29320795 Msa0766910:CDS
GGAAGAAGAGGAGAAAGAGG+AGG 0.597529 5_2:-29324930 Msa0766910:CDS
AGAATCAAGAACTCTCTAGC+TGG 0.597894 5_2:+29320801 None:intergenic
TGCGAAGAGAGATCTTGAGT+TGG 0.598167 5_2:-29324513 Msa0766910:CDS
CATTGAGAAAAGGCCTACTC+GGG 0.598950 5_2:-29322622 Msa0766910:CDS
GACCTGTCGAAGCAAGTGGA+AGG 0.601916 5_2:-29323569 Msa0766910:CDS
TCAGCTAGTGAAGGAATTGG+AGG 0.602487 5_2:-29324723 Msa0766910:CDS
TAAAGCAGATGCACTAAGGG+AGG 0.603377 5_2:-29321609 Msa0766910:CDS
CGCGCTGATAGTCTTCCTGA+GGG 0.603466 5_2:+29323452 None:intergenic
TAGTGAAGGAATTGGAGGAA+AGG 0.604260 5_2:-29324718 Msa0766910:CDS
AGATCGCCATAAATTGGCCA+TGG 0.608376 5_2:-29322874 Msa0766910:CDS
TGATAAAATTCAACCAACTG+TGG 0.609090 5_2:+29322387 None:intergenic
GATGTTAGAATATGCCGGAT+CGG 0.609797 5_2:-29323378 Msa0766910:CDS
TATGGCGATCTTTATACGCA+GGG 0.609835 5_2:+29322886 None:intergenic
CCTCCTAAACCATCAGGTGG+TGG 0.610139 5_2:-29322588 Msa0766910:CDS
CTTCAACAGTGATGAAAGCA+GGG 0.611532 5_2:+29325441 None:intergenic
CAGCTGATGTTAGAATATGC+CGG 0.612494 5_2:-29323383 Msa0766910:CDS
GAATATGCCGGATCGGAACG+AGG 0.616158 5_2:-29323371 Msa0766910:CDS
GGAGGAGGAGGTCCACCTGG+TGG 0.616417 5_2:+29322492 None:intergenic
CCTCCTCCTCGTCCACCAGG+TGG 0.621777 5_2:-29322504 Msa0766910:CDS
ACAAACTCAAATCCTGCGAA+TGG 0.622026 5_2:-29322555 Msa0766910:CDS
CGGATCGGAACGAGGTCAAG+GGG 0.623381 5_2:-29323363 Msa0766910:CDS
TTCATCTAGCCAGTTCACAA+AGG 0.630833 5_2:+29322027 None:intergenic
GGAGCAGGAATCAGACATTG+TGG 0.630928 5_2:-29324651 Msa0766910:CDS
CTAACAGAACCACCACCTGA+TGG 0.633052 5_2:+29322579 None:intergenic
CTACAAGTGAAAGAAGAGGC+GGG 0.634825 5_2:-29324395 Msa0766910:CDS
ATTCAACCAACTGTGGAGCA+CGG 0.636746 5_2:+29322394 None:intergenic
ACAAAGACAGATGCAGCTTG+AGG 0.637837 5_2:-29324468 Msa0766910:CDS
GTCTAAAGATCGTCAAGACG+AGG 0.638271 5_2:-29325107 Msa0766910:CDS
ATCCAGAAATTGAAGAAATG+GGG 0.638544 5_2:-29323221 Msa0766910:CDS
ACGATTGCGTCAGCTAGTGA+AGG 0.639024 5_2:-29324732 Msa0766910:CDS
TAAAGGCATGCATACCAGGA+AGG 0.640747 5_2:+29321997 None:intergenic
TAGCCCGAAATCACAAGCGA+AGG 0.642342 5_2:-29323411 Msa0766910:CDS
AGATTCTGGAGTTGTAGGCA+AGG 0.644734 5_2:-29321222 Msa0766910:intron
AATTACGAACCTGATGAACA+CGG 0.646865 5_2:+29320757 None:intergenic
AAAGGCCTACTCGGGTACCA+AGG 0.646961 5_2:-29322614 Msa0766910:CDS
AGGCCTATCAAAAGGAGCAG+CGG 0.652768 5_2:-29322433 Msa0766910:CDS
AATGTTGGAAATTCAAAACC+AGG 0.654067 5_2:-29325258 Msa0766910:intron
TCTACAAGTGAAAGAAGAGG+CGG 0.656081 5_2:-29324396 Msa0766910:CDS
GATAGGCCTCTTGGAAGAGG+CGG 0.658405 5_2:+29322447 None:intergenic
GTATGAGCTAAAGAATCACC+AGG 0.658793 5_2:-29323477 Msa0766910:CDS
TGGTCTACAAGTGAAAGAAG+AGG 0.663730 5_2:-29324399 Msa0766910:CDS
TGCTAGGAACAACATGATTG+GGG 0.664643 5_2:-29322292 Msa0766910:CDS
AGTATGAGTGTTAAATCTAG+GGG 0.665333 5_2:-29323125 Msa0766910:CDS
CAGACATTGTGGAGTTACAA+CGG 0.666939 5_2:-29324640 Msa0766910:CDS
GGTTGCCAAGGCAAAAGAGG+AGG 0.667693 5_2:-29323618 Msa0766910:CDS
ACGGCAGCTGAAAATTAAGA+CGG 0.676456 5_2:-29324621 Msa0766910:CDS
TGATGATAAAGCCAATTGTG+TGG 0.678932 5_2:-29325592 Msa0766910:five_prime_UTR
TAGTTCAAATGATCAATCTG+AGG 0.680104 5_2:-29322694 Msa0766910:CDS
CAGCAGCCACCAATAACTAG+AGG 0.681077 5_2:+29325647 None:intergenic
GCAGCTGAAAATTAAGACGG+TGG 0.682047 5_2:-29324618 Msa0766910:CDS
CCACCTCCTAAACCATCAGG+TGG 0.688030 5_2:-29322591 Msa0766910:CDS
GAGTGATCTAAAAGAAAAGG+CGG 0.689350 5_2:-29322844 Msa0766910:CDS
AGTTAAAACTAACCAGCTAG+GGG 0.689499 5_2:+29325764 None:intergenic
AACATGCATTGACCCAACGA+AGG 0.691991 5_2:+29323504 None:intergenic
CGAGCTCTCCAATATGACAG+AGG 0.711952 5_2:-29324222 Msa0766910:intron
GAGTTTGGGATCATCGACGA+AGG 0.715055 5_2:+29321538 None:intergenic
AAAGCTGATGTAGAAACACA+AGG 0.721363 5_2:-29322118 Msa0766910:CDS
ATATACAGAAGCAAATACCG+AGG 0.723922 5_2:+29320285 None:intergenic
ATCAGAAAGATAGATCATGG+AGG 0.770420 5_2:-29320024 Msa0766910:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTATTTTTATTTATAT+TGG - chr5_2:29320621-29320640 Msa0766910:intron 0.0%
!!! TTTATTTTTATTTATATTGG+TGG - chr5_2:29320624-29320643 Msa0766910:intron 10.0%
!!! TTTTATGTTAGAAATAAATT+TGG - chr5_2:29320828-29320847 Msa0766910:CDS 10.0%
!!! AAATATTTATATCAAAGTTT+TGG - chr5_2:29321724-29321743 Msa0766910:intron 10.0%
!! TTTCTTTAAATGATATTTGA+AGG - chr5_2:29320429-29320448 Msa0766910:CDS 15.0%
!! TATTGATATGTATCTTTAAA+TGG - chr5_2:29322119-29322138 Msa0766910:CDS 15.0%
!! ATTGATATGTATCTTTAAAT+GGG - chr5_2:29322120-29322139 Msa0766910:CDS 15.0%
!!! TTCTATTATTTTTCTCATTT+TGG - chr5_2:29323597-29323616 Msa0766910:CDS 15.0%
!!! AAATTTTAAAACATACAACA+TGG + chr5_2:29323981-29324000 None:intergenic 15.0%
!! TATCTATACCATAATATAAA+GGG + chr5_2:29324087-29324106 None:intergenic 15.0%
!! AAGTAATATGATAAATACTA+TGG + chr5_2:29324370-29324389 None:intergenic 15.0%
!! AATTTCACATCTATATTTAT+AGG + chr5_2:29325815-29325834 None:intergenic 15.0%
!! ATATGCATAAAAATATTCAG+TGG + chr5_2:29320253-29320272 None:intergenic 20.0%
!!! TTGAAGGAATAATCATTTTT+GGG - chr5_2:29320389-29320408 Msa0766910:CDS 20.0%
!!! AATAATCATTTTTGGGAAAT+GGG - chr5_2:29320396-29320415 Msa0766910:CDS 20.0%
!! GTTAGAAATAAATTTGGTAA+AGG - chr5_2:29320834-29320853 Msa0766910:CDS 20.0%
!!! AAAGTTGTTTAATTTTTGCA+GGG - chr5_2:29320857-29320876 Msa0766910:CDS 20.0%
!! AATTCGAATAGATTTACTAA+AGG + chr5_2:29321993-29322012 None:intergenic 20.0%
!!! TTTATTTTAGAAAGTTTAGG+TGG + chr5_2:29323078-29323097 None:intergenic 20.0%
!!! ACCTAAACTTTCTAAAATAA+AGG - chr5_2:29323077-29323096 Msa0766910:CDS 20.0%
!!! TCCTTTATTTTAGAAAGTTT+AGG + chr5_2:29323081-29323100 None:intergenic 20.0%
!! CATTTATGAAACATGTATAT+AGG - chr5_2:29323670-29323689 Msa0766910:intron 20.0%
!!! TTAAGCATGAAATAATTTTG+AGG + chr5_2:29323875-29323894 None:intergenic 20.0%
!! GTATCTATACCATAATATAA+AGG + chr5_2:29324088-29324107 None:intergenic 20.0%
!! TTGATTTCCTATGAAATATA+AGG - chr5_2:29324138-29324157 Msa0766910:intron 20.0%
!! AATATGATAAATACTATGGT+AGG + chr5_2:29324366-29324385 None:intergenic 20.0%
!! ATGACTTAATATTACTGTAT+TGG - chr5_2:29324462-29324481 Msa0766910:CDS 20.0%
!! CAAATATACAACATATATAC+TGG + chr5_2:29324782-29324801 None:intergenic 20.0%
!! TTTAATAACTCAAGAATTTG+TGG + chr5_2:29324811-29324830 None:intergenic 20.0%
!! CATAAAAGAAATAACAAAAG+TGG + chr5_2:29325086-29325105 None:intergenic 20.0%
!! TTCAATGAAATAAGAAAAAG+AGG - chr5_2:29325129-29325148 Msa0766910:intron 20.0%
!!! AATGTAAATTTGTAATGGAA+AGG + chr5_2:29325223-29325242 None:intergenic 20.0%
!! GTTCAAATGTAAATTTGTAA+TGG + chr5_2:29325228-29325247 None:intergenic 20.0%
!!! TTTTTTCTTTTCTTTTTCCT+CGG - chr5_2:29325511-29325530 Msa0766910:five_prime_UTR 20.0%
!! CAATCCTTTTTGTTCATTTT+TGG - chr5_2:29320143-29320162 Msa0766910:three_prime_UTR 25.0%
! AACTTAGTAAAAGCTATGTT+AGG + chr5_2:29320287-29320306 None:intergenic 25.0%
!! GTTGAAGGAATAATCATTTT+TGG - chr5_2:29320388-29320407 Msa0766910:CDS 25.0%
!!! GAATAATCATTTTTGGGAAA+TGG - chr5_2:29320395-29320414 Msa0766910:CDS 25.0%
! ATTTGAAGGAATGCATAATT+TGG - chr5_2:29320443-29320462 Msa0766910:intron 25.0%
!!! GAAAGTTGTTTAATTTTTGC+AGG - chr5_2:29320856-29320875 Msa0766910:CDS 25.0%
!!! AAGTTGTTTAATTTTTGCAG+GGG - chr5_2:29320858-29320877 Msa0766910:CDS 25.0%
! CAAAGTTTATGAAATTGAGA+TGG - chr5_2:29321036-29321055 Msa0766910:intron 25.0%
! TTTCAATTTCTTGTCAATCT+CGG + chr5_2:29321458-29321477 None:intergenic 25.0%
!!! ATTTTAAAGAAGCTTTGTCT+TGG - chr5_2:29322157-29322176 Msa0766910:intron 25.0%
! TAATCCAGAAATTGAAGAAA+TGG - chr5_2:29322590-29322609 Msa0766910:CDS 25.0%
! AATCCAGAAATTGAAGAAAT+GGG - chr5_2:29322591-29322610 Msa0766910:CDS 25.0%
! TTTATCAATCATTGATGAAG+CGG - chr5_2:29323442-29323461 Msa0766910:CDS 25.0%
!! TTCCTTATTAGTTTCTTCAA+CGG - chr5_2:29323485-29323504 Msa0766910:CDS 25.0%
! TTAACGTAGATTATATGAGA+AGG - chr5_2:29323891-29323910 Msa0766910:intron 25.0%
!!! TTTTAAAACATACAACATGG+AGG + chr5_2:29323978-29323997 None:intergenic 25.0%
! GTAAAAAACTGTATTGCTAA+AGG - chr5_2:29324002-29324021 Msa0766910:intron 25.0%
! TCATCAACCTTATATTTCAT+AGG + chr5_2:29324148-29324167 None:intergenic 25.0%
! ATATCAAGATCTGATGAAAT+TGG - chr5_2:29324237-29324256 Msa0766910:CDS 25.0%
! CATATTACTTACCAAGAAAA+TGG - chr5_2:29324380-29324399 Msa0766910:CDS 25.0%
! TGTACATTGAATACAAATCT+AGG - chr5_2:29324684-29324703 Msa0766910:CDS 25.0%
! GTACATTGAATACAAATCTA+GGG - chr5_2:29324685-29324704 Msa0766910:CDS 25.0%
! AAATCTAGATACACAAAACT+TGG - chr5_2:29324710-29324729 Msa0766910:CDS 25.0%
! GCTTATAATTAATCACATGA+TGG - chr5_2:29324860-29324879 Msa0766910:CDS 25.0%
! AATGAATTATACAGCTGAAA+GGG + chr5_2:29325558-29325577 None:intergenic 25.0%
! AGTAGCATTCACAATATAAT+TGG + chr5_2:29325631-29325650 None:intergenic 25.0%
! CTAAGAAAACATAATCAAGT+AGG + chr5_2:29325679-29325698 None:intergenic 25.0%
! TTTATCAGAAAGATAGATCA+TGG - chr5_2:29325786-29325805 Msa0766910:five_prime_UTR 25.0%
ATGCACACACAAGAAAAAAA+AGG + chr5_2:29320312-29320331 None:intergenic 30.0%
! TTTCTCTTTTCTGTCCTAAA+TGG - chr5_2:29320335-29320354 Msa0766910:exon 30.0%
TGATGAAACAGAATCCATTT+AGG + chr5_2:29320352-29320371 None:intergenic 30.0%
TACTATCATGAAGCTTCTTT+AGG + chr5_2:29320481-29320500 None:intergenic 30.0%
AAAGAAGCTTCATGATAGTA+AGG - chr5_2:29320481-29320500 Msa0766910:intron 30.0%
AATGTTGGAAATTCAAAACC+AGG - chr5_2:29320555-29320574 Msa0766910:intron 30.0%
TTACAGATGATTCTTTCGAA+AGG - chr5_2:29320756-29320775 Msa0766910:intron 30.0%
!! AGTTGTTTAATTTTTGCAGG+GGG - chr5_2:29320859-29320878 Msa0766910:CDS 30.0%
GATAAAAGGTCTTCAAATTC+TGG + chr5_2:29320965-29320984 None:intergenic 30.0%
! GAATTTGAAGACCTTTTATC+TGG - chr5_2:29320965-29320984 Msa0766910:intron 30.0%
TGAAGAAAATAACGATGAGA+AGG - chr5_2:29321012-29321031 Msa0766910:intron 30.0%
GTTGTTTAAGCAACAAAAGT+TGG + chr5_2:29321387-29321406 None:intergenic 30.0%
TTGCTTAAACAACAAGTTTC+TGG - chr5_2:29321394-29321413 Msa0766910:intron 30.0%
! TTTCTAAGTTTTGCATCACT+TGG - chr5_2:29321695-29321714 Msa0766910:intron 30.0%
CAGTTGATTGTCTAAACAAA+GGG + chr5_2:29321766-29321785 None:intergenic 30.0%
TCAGTTGATTGTCTAAACAA+AGG + chr5_2:29321767-29321786 None:intergenic 30.0%
GTATATTCAACGAAGTTGTT+TGG + chr5_2:29321832-29321851 None:intergenic 30.0%
AAACACTAAAGACACTTTGT+AGG + chr5_2:29321882-29321901 None:intergenic 30.0%
AATATACCAGCATCACAAAA+TGG + chr5_2:29321924-29321943 None:intergenic 30.0%
TTTCTAAATTGTCGTATGCT+TGG + chr5_2:29321967-29321986 None:intergenic 30.0%
ATCCAGAAATTGAAGAAATG+GGG - chr5_2:29322592-29322611 Msa0766910:CDS 30.0%
AAGAACACTAGAATCATCTT+TGG + chr5_2:29322623-29322642 None:intergenic 30.0%
TGAGTATGAGTGTTAAATCT+AGG - chr5_2:29322686-29322705 Msa0766910:CDS 30.0%
GAGTATGAGTGTTAAATCTA+GGG - chr5_2:29322687-29322706 Msa0766910:CDS 30.0%
AGTATGAGTGTTAAATCTAG+GGG - chr5_2:29322688-29322707 Msa0766910:CDS 30.0%
ATCAAGTGACTCACTAAATT+CGG - chr5_2:29322843-29322862 Msa0766910:CDS 30.0%
GTATAAAGATCGCCATAAAT+TGG - chr5_2:29322933-29322952 Msa0766910:CDS 30.0%
TTAGGTGGCAAAGATATATT+AGG + chr5_2:29323063-29323082 None:intergenic 30.0%
TTTGAACTAGCATGAACAAT+TGG + chr5_2:29323108-29323127 None:intergenic 30.0%
TAGTTCAAATGATCAATCTG+AGG - chr5_2:29323119-29323138 Msa0766910:CDS 30.0%
TGATAAAATTCAACCAACTG+TGG + chr5_2:29323429-29323448 None:intergenic 30.0%
TTATCAATCATTGATGAAGC+GGG - chr5_2:29323443-29323462 Msa0766910:CDS 30.0%
! TCCTTATTAGTTTCTTCAAC+GGG - chr5_2:29323486-29323505 Msa0766910:CDS 30.0%
AAGTTTAACATACAGCTAAG+AGG + chr5_2:29323569-29323588 None:intergenic 30.0%
! TCTTAAGTCATGACACATTT+TGG - chr5_2:29323624-29323643 Msa0766910:CDS 30.0%
!!! CCAAAAGTACCTATCAATTT+TGG + chr5_2:29324060-29324079 None:intergenic 30.0%
! CCAAAATTGATAGGTACTTT+TGG - chr5_2:29324057-29324076 Msa0766910:intron 30.0%
TTGGAGTTCCCTTTATATTA+TGG - chr5_2:29324076-29324095 Msa0766910:intron 30.0%
TCATAGGAAATCAAATGAGA+TGG + chr5_2:29324132-29324151 None:intergenic 30.0%
GATAAATACTATGGTAGGAA+GGG + chr5_2:29324361-29324380 None:intergenic 30.0%
TGATAAATACTATGGTAGGA+AGG + chr5_2:29324362-29324381 None:intergenic 30.0%
TTACTTACCAAGAAAATGGA+TGG - chr5_2:29324384-29324403 Msa0766910:CDS 30.0%
ATTGTTACGAACAAGAGATA+TGG - chr5_2:29324522-29324541 Msa0766910:CDS 30.0%
! AATTTGGAATCCCAATAAAC+TGG - chr5_2:29324563-29324582 Msa0766910:CDS 30.0%
AATCTTGTAGCCAGTTTATT+GGG + chr5_2:29324576-29324595 None:intergenic 30.0%
!!! TCAAGTTTTTTCCTCTCTTA+TGG + chr5_2:29324660-29324679 None:intergenic 30.0%
AATAACTCAAGAATTTGTGG+AGG + chr5_2:29324808-29324827 None:intergenic 30.0%
! AGCTTTATCTACAACAAGAT+AGG + chr5_2:29324913-29324932 None:intergenic 30.0%
! TTCTTGTTTGTGAGAACAAT+TGG + chr5_2:29325259-29325278 None:intergenic 30.0%
!! CAGTATTAGAGTGTTGTATT+TGG + chr5_2:29325332-29325351 None:intergenic 30.0%
CAAATACAACACTCTAATAC+TGG - chr5_2:29325330-29325349 Msa0766910:exon 30.0%
!! TGAAGGCTTTTGAAGATTTA+AGG - chr5_2:29325403-29325422 Msa0766910:five_prime_UTR 30.0%
TGATGAGTATTCTATGTTTC+TGG + chr5_2:29325483-29325502 None:intergenic 30.0%
GAATGAATTATACAGCTGAA+AGG + chr5_2:29325559-29325578 None:intergenic 30.0%
AGTTAAAACTAACCAGCTAG+GGG + chr5_2:29320052-29320071 None:intergenic 35.0%
CAGTTAAAACTAACCAGCTA+GGG + chr5_2:29320053-29320072 None:intergenic 35.0%
ACAGTTAAAACTAACCAGCT+AGG + chr5_2:29320054-29320073 None:intergenic 35.0%
GAGGCCAAAAATGAACAAAA+AGG + chr5_2:29320150-29320169 None:intergenic 35.0%
!!! CATTTTTGGCCTCTAGTTAT+TGG - chr5_2:29320157-29320176 Msa0766910:three_prime_UTR 35.0%
TGATGATAAAGCCAATTGTG+TGG - chr5_2:29320221-29320240 Msa0766910:three_prime_UTR 35.0%
! AGTGGTATTTTCCACACAAT+TGG + chr5_2:29320235-29320254 None:intergenic 35.0%
AGCTTCATGATAGTAAGGTT+AGG - chr5_2:29320486-29320505 Msa0766910:intron 35.0%
!! AAACACATAGAAGAAGTACC+TGG + chr5_2:29320576-29320595 None:intergenic 35.0%
! AAGCAACTTCGTCTACATTT+TGG - chr5_2:29320662-29320681 Msa0766910:intron 35.0%
ACTCAATCTCTCCAGATAAA+AGG + chr5_2:29320979-29320998 None:intergenic 35.0%
GAGATTGAGTTATCATTTCC+TGG - chr5_2:29320989-29321008 Msa0766910:intron 35.0%
!! TCATCGTTATTTTCTTCACC+AGG + chr5_2:29321010-29321029 None:intergenic 35.0%
TACCATTAATTCTCTGCAAG+CGG - chr5_2:29321237-29321256 Msa0766910:CDS 35.0%
CTTCAAGAAGAACTCACAAA+TGG - chr5_2:29321271-29321290 Msa0766910:CDS 35.0%
GTTGGCTAGAAACAAGATAA+AGG - chr5_2:29321318-29321337 Msa0766910:intron 35.0%
!!! ACAAAAGTTGGCCTTTTGTT+TGG + chr5_2:29321375-29321394 None:intergenic 35.0%
GAAAGCTGTGAATGATTTAG+AGG - chr5_2:29321474-29321493 Msa0766910:intron 35.0%
! CAAAGTGTCTTTAGTGTTTC+AGG - chr5_2:29321883-29321902 Msa0766910:intron 35.0%
! CATAACTTTTGACCACTTCT+CGG + chr5_2:29322064-29322083 None:intergenic 35.0%
TGGAAGGACTTCAAATGAAT+CGG - chr5_2:29322260-29322279 Msa0766910:CDS 35.0%
TTGTCAAAATCTTCACTTCC+TGG + chr5_2:29322514-29322533 None:intergenic 35.0%
TACCCCATTTCTTCAATTTC+TGG + chr5_2:29322597-29322616 None:intergenic 35.0%
! TCACCATCAAGATCTTTTTC+AGG - chr5_2:29322646-29322665 Msa0766910:CDS 35.0%
! ACACTCATACTCATCCTTTT+TGG + chr5_2:29322679-29322698 None:intergenic 35.0%
CTTATCATCAAGCTTTCAAG+CGG + chr5_2:29322715-29322734 None:intergenic 35.0%
GGAGAGTGATCTAAAAGAAA+AGG - chr5_2:29322966-29322985 Msa0766910:CDS 35.0%
GAGTGATCTAAAAGAAAAGG+CGG - chr5_2:29322969-29322988 Msa0766910:CDS 35.0%
AAAGCAAGAGTTCAGAAGTT+TGG - chr5_2:29322994-29323013 Msa0766910:CDS 35.0%
AAGCAAGAGTTCAGAAGTTT+GGG - chr5_2:29322995-29323014 Msa0766910:CDS 35.0%
TCAAATGATCAATCTGAGGA+TGG - chr5_2:29323123-29323142 Msa0766910:CDS 35.0%
GGCAAACTTTATCTTGCTAA+TGG + chr5_2:29323169-29323188 None:intergenic 35.0%
ACCCGTTGAAGAAACTAATA+AGG + chr5_2:29323490-29323509 None:intergenic 35.0%
ATGCTAGGAACAACATGATT+GGG - chr5_2:29323520-29323539 Msa0766910:CDS 35.0%
AAAGCTGATGTAGAAACACA+AGG - chr5_2:29323695-29323714 Msa0766910:intron 35.0%
! AGGTGATTTTGTCACATCAT+TGG - chr5_2:29323715-29323734 Msa0766910:intron 35.0%
TGATGAGAATTGACACCTAA+AGG + chr5_2:29323836-29323855 None:intergenic 35.0%
! ATATGAGAAGGCATGAAACT+TGG - chr5_2:29323903-29323922 Msa0766910:intron 35.0%
AAGGTCTGACCAAAATTGAT+AGG - chr5_2:29324048-29324067 Msa0766910:intron 35.0%
! TATCAAGCCATCCATTTTCT+TGG + chr5_2:29324394-29324413 None:intergenic 35.0%
! CAAGAGATATGGCTATTTCA+CGG - chr5_2:29324533-29324552 Msa0766910:CDS 35.0%
ATTTCACGGTACAGAGAATT+TGG - chr5_2:29324547-29324566 Msa0766910:CDS 35.0%
GAATCTTGTAGCCAGTTTAT+TGG + chr5_2:29324577-29324596 None:intergenic 35.0%
ATAAACTGGCTACAAGATTC+TGG - chr5_2:29324577-29324596 Msa0766910:CDS 35.0%
! TAGCATACTGGTATTTCTGT+TGG + chr5_2:29324634-29324653 None:intergenic 35.0%
GGTTCTCTCCTATCTTATTA+TGG - chr5_2:29324881-29324900 Msa0766910:CDS 35.0%
GGAGAGAACCATAATAAGAT+AGG + chr5_2:29324892-29324911 None:intergenic 35.0%
TTTCTTCTGTACAACTAGCA+AGG - chr5_2:29324932-29324951 Msa0766910:CDS 35.0%
AATTACGAACCTGATGAACA+CGG + chr5_2:29325059-29325078 None:intergenic 35.0%
GTTCATCAGGTTCGTAATTT+AGG - chr5_2:29325060-29325079 Msa0766910:CDS 35.0%
TAAGAAAAAGAGGTTGACTG+AGG - chr5_2:29325139-29325158 Msa0766910:intron 35.0%
GCATGCATTTAGGAAATAGA+AGG - chr5_2:29325161-29325180 Msa0766910:intron 35.0%
CAAACAAGCTTGAAATAGCT+TGG + chr5_2:29325200-29325219 None:intergenic 35.0%
! ATACTGGTGCAAAACTCTTT+TGG - chr5_2:29325346-29325365 Msa0766910:five_prime_UTR 35.0%
TATCTTCTTCACCAACTTGA+GGG + chr5_2:29325452-29325471 None:intergenic 35.0%
ATATACAGAAGCAAATACCG+AGG + chr5_2:29325531-29325550 None:intergenic 35.0%
ATCAGAAAGATAGATCATGG+AGG - chr5_2:29325789-29325808 Msa0766910:five_prime_UTR 35.0%
CTAGGGGAACAAGATTGATA+AGG + chr5_2:29320036-29320055 None:intergenic 40.0%
! TTTTGGCCTCTAGTTATTGG+TGG - chr5_2:29320160-29320179 Msa0766910:three_prime_UTR 40.0%
CTTCAACAGTGATGAAAGCA+GGG + chr5_2:29320375-29320394 None:intergenic 40.0%
ACTGTTAAGCAGCTCAATGT+TGG - chr5_2:29320540-29320559 Msa0766910:intron 40.0%
!!! CTACATTTTGGCTCAGAACA+TGG - chr5_2:29320674-29320693 Msa0766910:intron 40.0%
ATTGACCTTCTCTTGTTCTG+TGG + chr5_2:29320732-29320751 None:intergenic 40.0%
!! TGTTTAATTTTTGCAGGGGG+AGG - chr5_2:29320862-29320881 Msa0766910:CDS 40.0%
TAGTGAAGGAATTGGAGGAA+AGG - chr5_2:29321095-29321114 Msa0766910:intron 40.0%
AGTGAAGGAATTGGAGGAAA+GGG - chr5_2:29321096-29321115 Msa0766910:intron 40.0%
GAAAGGGAAGTGAAACTTGA+AGG - chr5_2:29321112-29321131 Msa0766910:intron 40.0%
GGAGAATTGCTTGAGTACTA+TGG - chr5_2:29321133-29321152 Msa0766910:intron 40.0%
GCTTGAGTACTATGGTTTGA+AGG - chr5_2:29321141-29321160 Msa0766910:intron 40.0%
CAGACATTGTGGAGTTACAA+CGG - chr5_2:29321173-29321192 Msa0766910:intron 40.0%
ACGGCAGCTGAAAATTAAGA+CGG - chr5_2:29321192-29321211 Msa0766910:intron 40.0%
CTTGAGGCTAACCAAACAAA+AGG - chr5_2:29321361-29321380 Msa0766910:intron 40.0%
TGGTCTACAAGTGAAAGAAG+AGG - chr5_2:29321414-29321433 Msa0766910:intron 40.0%
TCTACAAGTGAAAGAAGAGG+CGG - chr5_2:29321417-29321436 Msa0766910:intron 40.0%
! TGATTTAGAGGTTGCTGTTG+TGG - chr5_2:29321486-29321505 Msa0766910:intron 40.0%
!!! GTATTGCCATTTTGTGATGC+TGG - chr5_2:29321915-29321934 Msa0766910:intron 40.0%
GTATTCTTTGTTCCGAGAAG+TGG - chr5_2:29322049-29322068 Msa0766910:CDS 40.0%
AAGAACTCGTATACCTTCGT+TGG - chr5_2:29322296-29322315 Msa0766910:CDS 40.0%
AGAACTCGTATACCTTCGTT+GGG - chr5_2:29322297-29322316 Msa0766910:CDS 40.0%
GTATGAGCTAAAGAATCACC+AGG - chr5_2:29322336-29322355 Msa0766910:CDS 40.0%
TTTGCCTTCGCTTGTGATTT+CGG + chr5_2:29322409-29322428 None:intergenic 40.0%
CAGCTGATGTTAGAATATGC+CGG - chr5_2:29322430-29322449 Msa0766910:CDS 40.0%
GATGTTAGAATATGCCGGAT+CGG - chr5_2:29322435-29322454 Msa0766910:CDS 40.0%
CTGCCTGAAAAAGATCTTGA+TGG + chr5_2:29322652-29322671 None:intergenic 40.0%
TTTCAGGCAGTTCTCCAAAA+AGG - chr5_2:29322662-29322681 Msa0766910:CDS 40.0%
! CGCTTGAAAGCTTGATGATA+AGG - chr5_2:29322713-29322732 Msa0766910:CDS 40.0%
CTAGCAGTATTAGGAGTTTC+AGG + chr5_2:29322802-29322821 None:intergenic 40.0%
! CTGATGACTTGGACATCAAA+TGG + chr5_2:29322882-29322901 None:intergenic 40.0%
TATGGCGATCTTTATACGCA+GGG + chr5_2:29322930-29322949 None:intergenic 40.0%
TTATGGCGATCTTTATACGC+AGG + chr5_2:29322931-29322950 None:intergenic 40.0%
AGGTCTATCTCTTTCGATCT+TGG + chr5_2:29323043-29323062 None:intergenic 40.0%
AGTTTGCCGACATTGAGAAA+AGG - chr5_2:29323181-29323200 Msa0766910:CDS 40.0%
! AGTAGGCCTTTTCTCAATGT+CGG + chr5_2:29323190-29323209 None:intergenic 40.0%
ACATTGAGAAAAGGCCTACT+CGG - chr5_2:29323190-29323209 Msa0766910:CDS 40.0%
ACAAACTCAAATCCTGCGAA+TGG - chr5_2:29323258-29323277 Msa0766910:CDS 40.0%
GATGCTAGGAACAACATGAT+TGG - chr5_2:29323519-29323538 Msa0766910:CDS 40.0%
TGCTAGGAACAACATGATTG+GGG - chr5_2:29323521-29323540 Msa0766910:CDS 40.0%
GTCTTCAATATCTGAGAAGG+AGG + chr5_2:29323759-29323778 None:intergenic 40.0%
CAGGTCTTCAATATCTGAGA+AGG + chr5_2:29323762-29323781 None:intergenic 40.0%
CTTCTCAGATATTGAAGACC+TGG - chr5_2:29323760-29323779 Msa0766910:intron 40.0%
TTCATCTAGCCAGTTCACAA+AGG + chr5_2:29323789-29323808 None:intergenic 40.0%
AGATGAAGAACTTTCCTTCC+TGG - chr5_2:29323802-29323821 Msa0766910:intron 40.0%
ATTTCAACCATTCACATCCG+AGG - chr5_2:29323948-29323967 Msa0766910:intron 40.0%
! TACAACATGGAGGTTTTCCT+CGG + chr5_2:29323968-29323987 None:intergenic 40.0%
! CTGTCTTGAAGCACTTTGAT+TGG - chr5_2:29324173-29324192 Msa0766910:intron 40.0%
AAGGTAAAGCAGATGCACTA+AGG - chr5_2:29324200-29324219 Msa0766910:intron 40.0%
AGGTAAAGCAGATGCACTAA+GGG - chr5_2:29324201-29324220 Msa0766910:intron 40.0%
! GGTTTGAAACATTTGCAGAG+TGG - chr5_2:29324483-29324502 Msa0766910:CDS 40.0%
!! CTACAAGATTCTGGAGTTGT+AGG - chr5_2:29324586-29324605 Msa0766910:CDS 40.0%
! CTCTTATGGTCTTAGCATAC+TGG + chr5_2:29324646-29324665 None:intergenic 40.0%
GTATGCTAAGACCATAAGAG+AGG - chr5_2:29324646-29324665 Msa0766910:CDS 40.0%
AGAATCAAGAACTCTCTAGC+TGG + chr5_2:29325015-29325034 None:intergenic 40.0%
AGAGAGTTCTTGATTCTGCA+AGG - chr5_2:29325018-29325037 Msa0766910:intron 40.0%
! TTTTGCTTTCCGTGTTCATC+AGG - chr5_2:29325047-29325066 Msa0766910:intron 40.0%
!!! CTCTTTTGGTTTCAGTTTGC+AGG - chr5_2:29325360-29325379 Msa0766910:five_prime_UTR 40.0%
!!! TTTTGGTTTCAGTTTGCAGG+AGG - chr5_2:29325363-29325382 Msa0766910:five_prime_UTR 40.0%
ATCTTCTTCACCAACTTGAG+GGG + chr5_2:29325451-29325470 None:intergenic 40.0%
CTATCTTCTTCACCAACTTG+AGG + chr5_2:29325453-29325472 None:intergenic 40.0%
ATCAATCTTGTTCCCCTAGC+TGG - chr5_2:29320037-29320056 Msa0766910:three_prime_UTR 45.0%
CCTTCAACAGTGATGAAAGC+AGG + chr5_2:29320376-29320395 None:intergenic 45.0%
CCTGCTTTCATCACTGTTGA+AGG - chr5_2:29320373-29320392 Msa0766910:CDS 45.0%
GACGAAGTTGCTTAGTTCGT+AGG + chr5_2:29320655-29320674 None:intergenic 45.0%
GCTCAGAACATGGTGAAGAA+AGG - chr5_2:29320684-29320703 Msa0766910:intron 45.0%
GTCTAAAGATCGTCAAGACG+AGG - chr5_2:29320706-29320725 Msa0766910:intron 45.0%
TCAGCTAGTGAAGGAATTGG+AGG - chr5_2:29321090-29321109 Msa0766910:intron 45.0%
GTACTATGGTTTGAAGGAGC+AGG - chr5_2:29321147-29321166 Msa0766910:intron 45.0%
GCAGCTGAAAATTAAGACGG+TGG - chr5_2:29321195-29321214 Msa0766910:intron 45.0%
CTCCGCTTGCAGAGAATTAA+TGG + chr5_2:29321242-29321261 None:intergenic 45.0%
TGCGAAGAGAGATCTTGAGT+TGG - chr5_2:29321300-29321319 Msa0766910:CDS 45.0%
ACAAAGACAGATGCAGCTTG+AGG - chr5_2:29321345-29321364 Msa0766910:intron 45.0%
CTACAAGTGAAAGAAGAGGC+GGG - chr5_2:29321418-29321437 Msa0766910:intron 45.0%
! TTGCTGTTGTGGAGCTTAAG+AGG - chr5_2:29321497-29321516 Msa0766910:CDS 45.0%
CTCTGTCATATTGGAGAGCT+CGG + chr5_2:29321593-29321612 None:intergenic 45.0%
GAGTCTGACCTCTGTCATAT+TGG + chr5_2:29321602-29321621 None:intergenic 45.0%
TCTTGGACTGCAGAGTGAAA+TGG - chr5_2:29322174-29322193 Msa0766910:intron 45.0%
AATGGTTGCCAAGGCAAAAG+AGG - chr5_2:29322192-29322211 Msa0766910:intron 45.0%
! AACATGCATTGACCCAACGA+AGG + chr5_2:29322312-29322331 None:intergenic 45.0%
GTTGGGTCAATGCATGTTTG+AGG - chr5_2:29322314-29322333 Msa0766910:CDS 45.0%
TTGCCTTCGCTTGTGATTTC+GGG + chr5_2:29322408-29322427 None:intergenic 45.0%
ACTTCCTGGTGAAGAAGGAT+GGG + chr5_2:29322500-29322519 None:intergenic 45.0%
TCTTCACTTCCTGGTGAAGA+AGG + chr5_2:29322505-29322524 None:intergenic 45.0%
GGTGATTGCTACACTATCAC+TGG + chr5_2:29322743-29322762 None:intergenic 45.0%
AGTGTAGCAATCACCACCTT+TGG - chr5_2:29322748-29322767 Msa0766910:CDS 45.0%
CAATCACCACCTTTGGTCAA+GGG - chr5_2:29322755-29322774 Msa0766910:CDS 45.0%
AATCACCACCTTTGGTCAAG+GGG - chr5_2:29322756-29322775 Msa0766910:CDS 45.0%
TTCTTGATCCCCTTGACCAA+AGG + chr5_2:29322767-29322786 None:intergenic 45.0%
ACTCCTAATACTGCTAGTGC+TGG - chr5_2:29322805-29322824 Msa0766910:CDS 45.0%
AGACCAGCACTAGCAGTATT+AGG + chr5_2:29322811-29322830 None:intergenic 45.0%
AGACGCATCAACTGATGACT+TGG + chr5_2:29322893-29322912 None:intergenic 45.0%
AGATCGCCATAAATTGGCCA+TGG - chr5_2:29322939-29322958 Msa0766910:CDS 45.0%
CCATAAATTGGCCATGGCTA+GGG - chr5_2:29322945-29322964 Msa0766910:CDS 45.0%
CATTGAGAAAAGGCCTACTC+GGG - chr5_2:29323191-29323210 Msa0766910:CDS 45.0%
TTTGATAGGCCTCTTGGAAG+AGG + chr5_2:29323372-29323391 None:intergenic 45.0%
CTTCCAAGAGGCCTATCAAA+AGG - chr5_2:29323372-29323391 Msa0766910:CDS 45.0%
ATTCAACCAACTGTGGAGCA+CGG + chr5_2:29323422-29323441 None:intergenic 45.0%
! TAAAGGCATGCATACCAGGA+AGG + chr5_2:29323819-29323838 None:intergenic 45.0%
TTCCTGGTATGCATGCCTTT+AGG - chr5_2:29323818-29323837 Msa0766910:intron 45.0%
! AGGTTTTCCTCGGATGTGAA+TGG + chr5_2:29323958-29323977 None:intergenic 45.0%
!! AAGCACTTTGATTGGCCTGA+AGG - chr5_2:29324181-29324200 Msa0766910:intron 45.0%
AGTGCATCTGCTTTACCTTC+AGG + chr5_2:29324199-29324218 None:intergenic 45.0%
TAAAGCAGATGCACTAAGGG+AGG - chr5_2:29324204-29324223 Msa0766910:intron 45.0%
GCAGCTTCACATGAGAGTTT+GGG + chr5_2:29324292-29324311 None:intergenic 45.0%
AGCAGCTTCACATGAGAGTT+TGG + chr5_2:29324293-29324312 None:intergenic 45.0%
ACTATGGTAGGAAGGGAAAG+AGG + chr5_2:29324354-29324373 None:intergenic 45.0%
!! AGATTCTGGAGTTGTAGGCA+AGG - chr5_2:29324591-29324610 Msa0766910:CDS 45.0%
GTTGACTGAGGCATGCATTT+AGG - chr5_2:29325151-29325170 Msa0766910:intron 45.0%
! CTTTGATGCAGAGAGCATGA+AGG - chr5_2:29325386-29325405 Msa0766910:five_prime_UTR 45.0%
!! TTTGTAAAAAAAAAAAAAAA+AGG - chr5_2:29324029-29324048 Msa0766910:intron 5.0%
CAGCAGCCACCAATAACTAG+AGG + chr5_2:29320169-29320188 None:intergenic 50.0%
GGAGGAAGAAGAGGAGAAAG+AGG - chr5_2:29320880-29320899 Msa0766910:CDS 50.0%
GGAAGAAGAGGAGAAAGAGG+AGG - chr5_2:29320883-29320902 Msa0766910:CDS 50.0%
ACGATTGCGTCAGCTAGTGA+AGG - chr5_2:29321081-29321100 Msa0766910:intron 50.0%
GCGTCAGCTAGTGAAGGAAT+TGG - chr5_2:29321087-29321106 Msa0766910:intron 50.0%
GGAGCAGGAATCAGACATTG+TGG - chr5_2:29321162-29321181 Msa0766910:intron 50.0%
GAGCTCGGCAACTCTAGATT+CGG + chr5_2:29321578-29321597 None:intergenic 50.0%
CGAGCTCTCCAATATGACAG+AGG - chr5_2:29321591-29321610 Msa0766910:CDS 50.0%
GCAGAGTGAAATGGTTGCCA+AGG - chr5_2:29322183-29322202 Msa0766910:intron 50.0%
! ACTGACCTCCTCTTTTGCCT+TGG + chr5_2:29322203-29322222 None:intergenic 50.0%
GGTCTTCATTTGCGTGTCTC+AGG + chr5_2:29322228-29322247 None:intergenic 50.0%
TGAAGACCTGTCGAAGCAAG+TGG - chr5_2:29322240-29322259 Msa0766910:intron 50.0%
TCGCTTGTGATTTCGGGCTA+AGG + chr5_2:29322402-29322421 None:intergenic 50.0%
TAGCCCGAAATCACAAGCGA+AGG - chr5_2:29322402-29322421 Msa0766910:CDS 50.0%
TTCTCCCATCCTTCTTCACC+AGG - chr5_2:29322493-29322512 Msa0766910:CDS 50.0%
CACTTCCTGGTGAAGAAGGA+TGG + chr5_2:29322501-29322520 None:intergenic 50.0%
GCAATCACCACCTTTGGTCA+AGG - chr5_2:29322754-29322773 Msa0766910:CDS 50.0%
TTGATCCCCTTGACCAAAGG+TGG + chr5_2:29322764-29322783 None:intergenic 50.0%
! GTCATCAGTTGATGCGTCTG+TGG - chr5_2:29322894-29322913 Msa0766910:CDS 50.0%
GCCATAAATTGGCCATGGCT+AGG - chr5_2:29322944-29322963 Msa0766910:CDS 50.0%
CCCTAGCCATGGCCAATTTA+TGG + chr5_2:29322948-29322967 None:intergenic 50.0%
TAGATCACTCTCCCTAGCCA+TGG + chr5_2:29322959-29322978 None:intergenic 50.0%
GAACCACCACCTGATGGTTT+AGG + chr5_2:29323231-29323250 None:intergenic 50.0%
CTAACAGAACCACCACCTGA+TGG + chr5_2:29323237-29323256 None:intergenic 50.0%
GCAGATGGTATTCCATTCGC+AGG + chr5_2:29323273-29323292 None:intergenic 50.0%
! GCTCCTTTTGATAGGCCTCT+TGG + chr5_2:29323378-29323397 None:intergenic 50.0%
AGGCCTATCAAAAGGAGCAG+CGG - chr5_2:29323380-29323399 Msa0766910:CDS 50.0%
! CATCCGCTGCTCCTTTTGAT+AGG + chr5_2:29323386-29323405 None:intergenic 50.0%
GATGAAGCGGGAAGCAAAGA+AGG - chr5_2:29323455-29323474 Msa0766910:CDS 50.0%
CGGGTAACACATCTGATGCT+AGG - chr5_2:29323505-29323524 Msa0766910:CDS 50.0%
ACCTGGTTGCCTTTGTGAAC+TGG - chr5_2:29323777-29323796 Msa0766910:intron 50.0%
! CACCTAAAGGCATGCATACC+AGG + chr5_2:29323823-29323842 None:intergenic 50.0%
! GAGTTTGGGATCATCGACGA+AGG + chr5_2:29324278-29324297 None:intergenic 50.0%
! TCTCTAGCTGGTTCCTTCTC+AGG + chr5_2:29325003-29325022 None:intergenic 50.0%
GTAGGCAGCGATGATGATCT+TGG + chr5_2:29325661-29325680 None:intergenic 50.0%
CGAGGCCACAGAACAAGAGA+AGG - chr5_2:29320724-29320743 Msa0766910:intron 55.0%
TTTGCAGGGGGAGGAAGAAG+AGG - chr5_2:29320871-29320890 Msa0766910:CDS 55.0%
GGTTGCCAAGGCAAAAGAGG+AGG - chr5_2:29322195-29322214 Msa0766910:intron 55.0%
GACCTGTCGAAGCAAGTGGA+AGG - chr5_2:29322244-29322263 Msa0766910:intron 55.0%
GTCCTTCCACTTGCTTCGAC+AGG + chr5_2:29322249-29322268 None:intergenic 55.0%
AAGAATCACCAGGCACCCTC+AGG - chr5_2:29322346-29322365 Msa0766910:CDS 55.0%
!! ATAGTCTTCCTGAGGGTGCC+TGG + chr5_2:29322357-29322376 None:intergenic 55.0%
! CGCGCTGATAGTCTTCCTGA+GGG + chr5_2:29322364-29322383 None:intergenic 55.0%
TCGGGCTAAGGTTCTTGCTG+AGG + chr5_2:29322390-29322409 None:intergenic 55.0%
GAATATGCCGGATCGGAACG+AGG - chr5_2:29322442-29322461 Msa0766910:CDS 55.0%
AAAGGCCTACTCGGGTACCA+AGG - chr5_2:29323199-29323218 Msa0766910:CDS 55.0%
GATGGTTTAGGAGGTGGCCT+TGG + chr5_2:29323219-29323238 None:intergenic 55.0%
AGGCCACCTCCTAAACCATC+AGG - chr5_2:29323219-29323238 Msa0766910:CDS 55.0%
CCACCTGATGGTTTAGGAGG+TGG + chr5_2:29323225-29323244 None:intergenic 55.0%
CCACCTCCTAAACCATCAGG+TGG - chr5_2:29323222-29323241 Msa0766910:CDS 55.0%
CCACCACCTGATGGTTTAGG+AGG + chr5_2:29323228-29323247 None:intergenic 55.0%
CCTCCTAAACCATCAGGTGG+TGG - chr5_2:29323225-29323244 Msa0766910:CDS 55.0%
GGAGGAATGGATGGAGCAGA+TGG + chr5_2:29323288-29323307 None:intergenic 55.0%
GATAGGCCTCTTGGAAGAGG+CGG + chr5_2:29323369-29323388 None:intergenic 55.0%
AGTTCACCGTGCTCCACAGT+TGG - chr5_2:29323413-29323432 Msa0766910:CDS 55.0%
GCCAGTTCACAAAGGCAACC+AGG + chr5_2:29323781-29323800 None:intergenic 55.0%
ACCAACTTGAGGGGCTTGAG+GGG + chr5_2:29325442-29325461 None:intergenic 55.0%
CACCAACTTGAGGGGCTTGA+GGG + chr5_2:29325443-29325462 None:intergenic 55.0%
TCACCAACTTGAGGGGCTTG+AGG + chr5_2:29325444-29325463 None:intergenic 55.0%
! GCGCGCTGATAGTCTTCCTG+AGG + chr5_2:29322365-29322384 None:intergenic 60.0%
CCCTTGACCTCGTTCCGATC+CGG + chr5_2:29322452-29322471 None:intergenic 60.0%
CCGGATCGGAACGAGGTCAA+GGG - chr5_2:29322449-29322468 Msa0766910:CDS 60.0%
CGGATCGGAACGAGGTCAAG+GGG - chr5_2:29322450-29322469 Msa0766910:CDS 60.0%
GGAGGAGGAGGAGGAATGGA+TGG + chr5_2:29323297-29323316 None:intergenic 60.0%
ACGAGGAGGAGGAGGAGGAA+TGG + chr5_2:29323301-29323320 None:intergenic 60.0%
CTTGAGGGGCTTGAGGGGTT+TGG + chr5_2:29325437-29325456 None:intergenic 60.0%
ACCCCTCAAGCCCCTCAAGT+TGG - chr5_2:29325438-29325457 Msa0766910:five_prime_UTR 60.0%
GCCGGATCGGAACGAGGTCA+AGG - chr5_2:29322448-29322467 Msa0766910:CDS 65.0%
! GGTGGCCTTGGTACCCGAGT+AGG + chr5_2:29323207-29323226 None:intergenic 65.0%
CTTGGAAGAGGCGGTGGAGG+AGG + chr5_2:29323360-29323379 None:intergenic 65.0%
CCTCTTGGAAGAGGCGGTGG+AGG + chr5_2:29323363-29323382 None:intergenic 65.0%
CCTCCACCGCCTCTTCCAAG+AGG - chr5_2:29323360-29323379 Msa0766910:CDS 65.0%
AGGCCTCTTGGAAGAGGCGG+TGG + chr5_2:29323366-29323385 None:intergenic 65.0%
GGTGGACGAGGAGGAGGAGG+AGG + chr5_2:29323306-29323325 None:intergenic 70.0%
! CCTGGTGGACGAGGAGGAGG+AGG + chr5_2:29323309-29323328 None:intergenic 70.0%
CCTCCTCCTCCTCGTCCACC+AGG - chr5_2:29323306-29323325 Msa0766910:CDS 70.0%
! CCACCTGGTGGACGAGGAGG+AGG + chr5_2:29323312-29323331 None:intergenic 70.0%
CCTCCTCCTCGTCCACCAGG+TGG - chr5_2:29323309-29323328 Msa0766910:CDS 70.0%
! GGTCCACCTGGTGGACGAGG+AGG + chr5_2:29323315-29323334 None:intergenic 70.0%
! GGAGGTCCACCTGGTGGACG+AGG + chr5_2:29323318-29323337 None:intergenic 70.0%
GGAGGAGGAGGTCCACCTGG+TGG + chr5_2:29323324-29323343 None:intergenic 70.0%
GGTGGAGGAGGAGGTCCACC+TGG + chr5_2:29323327-29323346 None:intergenic 70.0%
GGTGGACCTCCTCCTCCACC+AGG - chr5_2:29323327-29323346 Msa0766910:CDS 70.0%
GGACCTCCTCCTCCACCAGG+TGG - chr5_2:29323330-29323349 Msa0766910:CDS 70.0%
GGTCCACCTGGTGGAGGAGG+AGG + chr5_2:29323336-29323355 None:intergenic 70.0%
GGAAGAGGCGGTGGAGGAGG+CGG + chr5_2:29323357-29323376 None:intergenic 70.0%
GGCGGTCCACCTGGTGGAGG+AGG + chr5_2:29323339-29323358 None:intergenic 75.0%
GGAGGCGGTCCACCTGGTGG+AGG + chr5_2:29323342-29323361 None:intergenic 75.0%
GGAGGAGGCGGTCCACCTGG+TGG + chr5_2:29323345-29323364 None:intergenic 75.0%
GGTGGAGGAGGCGGTCCACC+TGG + chr5_2:29323348-29323367 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 29319997 29325838 29319997 ID=Msa0766910;Name=Msa0766910
chr5_2 mRNA 29319997 29325838 29319997 ID=Msa0766910-mRNA-1;Parent=Msa0766910;Name=Msa0766910-mRNA-1;_AED=0.04;_eAED=0.04;_QI=495|1|1|1|1|1|9|347|997
chr5_2 exon 29319997 29320460 29319997 ID=Msa0766910-mRNA-1:exon:11211;Parent=Msa0766910-mRNA-1
chr5_2 exon 29320767 29320910 29320767 ID=Msa0766910-mRNA-1:exon:11210;Parent=Msa0766910-mRNA-1
chr5_2 exon 29321223 29321334 29321223 ID=Msa0766910-mRNA-1:exon:11209;Parent=Msa0766910-mRNA-1
chr5_2 exon 29321494 29321675 29321494 ID=Msa0766910-mRNA-1:exon:11208;Parent=Msa0766910-mRNA-1
chr5_2 exon 29322012 29322143 29322012 ID=Msa0766910-mRNA-1:exon:11207;Parent=Msa0766910-mRNA-1
chr5_2 exon 29322260 29323648 29322260 ID=Msa0766910-mRNA-1:exon:11206;Parent=Msa0766910-mRNA-1
chr5_2 exon 29324223 29324957 29324223 ID=Msa0766910-mRNA-1:exon:11205;Parent=Msa0766910-mRNA-1
chr5_2 exon 29325048 29325145 29325048 ID=Msa0766910-mRNA-1:exon:11204;Parent=Msa0766910-mRNA-1
chr5_2 exon 29325259 29325838 29325259 ID=Msa0766910-mRNA-1:exon:11203;Parent=Msa0766910-mRNA-1
chr5_2 five_prime_UTR 29325344 29325838 29325344 ID=Msa0766910-mRNA-1:five_prime_utr;Parent=Msa0766910-mRNA-1
chr5_2 CDS 29325259 29325343 29325259 ID=Msa0766910-mRNA-1:cds;Parent=Msa0766910-mRNA-1
chr5_2 CDS 29325048 29325145 29325048 ID=Msa0766910-mRNA-1:cds;Parent=Msa0766910-mRNA-1
chr5_2 CDS 29324223 29324957 29324223 ID=Msa0766910-mRNA-1:cds;Parent=Msa0766910-mRNA-1
chr5_2 CDS 29322260 29323648 29322260 ID=Msa0766910-mRNA-1:cds;Parent=Msa0766910-mRNA-1
chr5_2 CDS 29322012 29322143 29322012 ID=Msa0766910-mRNA-1:cds;Parent=Msa0766910-mRNA-1
chr5_2 CDS 29321494 29321675 29321494 ID=Msa0766910-mRNA-1:cds;Parent=Msa0766910-mRNA-1
chr5_2 CDS 29321223 29321334 29321223 ID=Msa0766910-mRNA-1:cds;Parent=Msa0766910-mRNA-1
chr5_2 CDS 29320767 29320910 29320767 ID=Msa0766910-mRNA-1:cds;Parent=Msa0766910-mRNA-1
chr5_2 CDS 29320344 29320460 29320344 ID=Msa0766910-mRNA-1:cds;Parent=Msa0766910-mRNA-1
chr5_2 three_prime_UTR 29319997 29320343 29319997 ID=Msa0766910-mRNA-1:three_prime_utr;Parent=Msa0766910-mRNA-1
Gene Sequence

>Msa0766910

ATGATAGTAAGGTTAGGACTCATTGTTGCTGCTTCATTAGCAGCTTTTACTGTTAAGCAGCTCAATGTTGGAAATTCAAAACCAGAACATGGTGAAGAAAGGTCTAAAGATCGTCAAGACGAGGCCACAGAACAAGAGAAGGTCAATAGTATTACAGATGATTCTTTCGAAAGGAATGATGATGGGGAGGAAGAAGAGGAGAAAGAGGAGGTTAAATTAATTAGCAGCATAATTAATCGAGCGAATGATTTTGAAGATGATATTCTACCAGAATTTGAAGACCTTTTATCTGGAGAGATTGAGTTATCATTTCCTGGTGAAGAAAATAACGATGAGAAGGACAAAGTTTATGAAATTGAGATGGCATACAATGATAGTGAATTAGAACGATTGCGTCAGCTAGTGAAGGAATTGGAGGAAAGGGAAGTGAAACTTGAAGGAGAATTGCTTGAGTACTATGGTTTGAAGGAGCAGGAATCAGACATTGTGGAGTTACAACGGCAGCTGAAAATTAAGACGGTGGAAATTGACATGCTTAATATTACCATTAATTCTCTGCAAGCGGAGCGAAAGAAGCTTCAAGAAGAACTCACAAATGGAGCTTCTGCGAAGAGAGATCTTGAGTTGGCTAGAAACAAGATAAAGGAGCTACAAAGACAGATGCAGCTTGAGGCTAACCAAACAAAAGGCCAACTTTTGTTGCTTAAACAACAAGTTTCTGGTCTACAAGTGAAAGAAGAGGCGGGTGCAATAAAAGATGCCGAGATTGACAAGAAATTGAAAGCTGTGAATGATTTAGAGGTTGCTGTTGTGGAGCTTAAGAGGAAAAATAAAGAACTTCAATACGAGAAGCGAGAGCTAACTGTTAAACTCAATGCTGCCGAATCTAGAGTTGCCGAGCTCTCCAATATGACAGAGAGTGAAATGGTTGCCAAGGCAAAAGAGGAGGTCAGTAACCTGAGACACGCAAATGAAGACCTGTCGAAGCAAGTGGAAGGACTTCAAATGAATCGGTTTAGCGAAGTTGAAGAACTCGTATACCTTCGTTGGGTCAATGCATGTTTGAGGTATGAGCTAAAGAATCACCAGGCACCCTCAGGAAGACTATCAGCGCGCGACCTCAGCAAGAACCTTAGCCCGAAATCACAAGCGAAGGCAAAGCAGCTGATGTTAGAATATGCCGGATCGGAACGAGGTCAAGGGGACACAGATCTTGAAAGCAACTTCTCCCATCCTTCTTCACCAGGAAGTGAAGATTTTGACAATGCTTCTATTGACAGCTTTTCTAGCAAATATAGTAGTGTTAGCAAGAAAACTAGCTTAATCCAGAAATTGAAGAAATGGGGTAAAACCAAAGATGATTCTAGTGTTCTTTCATCACCATCAAGATCTTTTTCAGGCAGTTCTCCAAAAAGGATGAGTATGAGTGTTAAATCTAGGGGTCCGCTTGAAAGCTTGATGATAAGGAATGCCAGTGATAGTGTAGCAATCACCACCTTTGGTCAAGGGGATCAAGAATCTATTTATTCTCCTGAAACTCCTAATACTGCTAGTGCTGGTCTAAGAAGAGTTACATCAAGTGACTCACTAAATTCGGTTGCTTCTTCATTCCATTTGATGTCCAAGTCATCAGTTGATGCGTCTGTGGACGAAAAGTACCCTGCGTATAAAGATCGCCATAAATTGGCCATGGCTAGGGAGAGTGATCTAAAAGAAAAGGCGGAAAAAGCAAGAGTTCAGAAGTTTGGGAACAGTTCAAATTTGAATATGACCAAGATCGAAAGAGATAGACCTAATATATCTTTGCCACCTAAACTTTCTAAAATAAAGGAGAAGCCAATTGTTCATGCTAGTTCAAATGATCAATCTGAGGATGGAAAGAATGTTGAAAATCAAACCATTAGCAAGATAAAGTTTGCCGACATTGAGAAAAGGCCTACTCGGGTACCAAGGCCACCTCCTAAACCATCAGGTGGTGGTTCTGTTAGCACAAACTCAAATCCTGCGAATGGAATACCATCTGCTCCATCCATTCCTCCTCCTCCTCCTCGTCCACCAGGTGGACCTCCTCCTCCACCAGGTGGACCGCCTCCTCCACCGCCTCTTCCAAGAGGCCTATCAAAAGGAGCAGCGGATGACGACAAAGTTCACCGTGCTCCACAGTTGGTTGAATTTTATCAATCATTGATGAAGCGGGAAGCAAAGAAGGACACTTCTTCCTTATTAGTTTCTTCAACGGGTAACACATCTGATGCTAGGAACAACATGATTGGGGAAATTGAGAATAGATCAACATTCCTCTTAGCTGTGAAAGCTGATGTAGAAACACAAGGTGATTTTGTCACATCATTGGCAACTGAAGTTAGAGCATCCTCCTTCTCAGATATTGAAGACCTGGTTGCCTTTGTGAACTGGCTAGATGAAGAACTTTCCTTCCTGGTTGATGAACGAGCTGTCTTGAAGCACTTTGATTGGCCTGAAGGTAAAGCAGATGCACTAAGGGAGGCAGCTTTTGAATATCAAGATCTGATGAAATTGGAGAATCGAGTCTCTACCTTCGTCGATGATCCCAAACTCTCATGTGAAGCTGCTCTCAAGAAAATGTATTCATTGCTTGAAAAAGTGGAGCAAAGTGTATATGCATTGTTACGAACAAGAGATATGGCTATTTCACGGTACAGAGAATTTGGAATCCCAATAAACTGGCTACAAGATTCTGGAGTTGTAGGCAAGATAAAGCTTTCTTCTGTACAACTAGCAAGGAAGTATATGAAACGTGTTGCATCTGAACTTGATGCATTATCTGGACCTGAGAAGGAACCAGCTAGAGAGTTCTTGATTCTGCAAGGCGTTCGTTTTGCTTTCCGTGTTCATCAGTTTGCAGGAGGCTTTGATGCAGAGAGCATGAAGGCTTTTGAAGATTTAAGGAGTCGAATCCAAACCCCTCAAGCCCCTCAAGTTGGTGAAGAAGATAGTAAACAACCAGAAACATAG
Protein sequence

>Msa0766910

MIVRLGLIVAASLAAFTVKQLNVGNSKPEHGEERSKDRQDEATEQEKVNSITDDSFERNDDGEEEEEKEEVKLISSIINRANDFEDDILPEFEDLLSGEIELSFPGEENNDEKDKVYEIEMAYNDSELERLRQLVKELEEREVKLEGELLEYYGLKEQESDIVELQRQLKIKTVEIDMLNITINSLQAERKKLQEELTNGASAKRDLELARNKIKELQRQMQLEANQTKGQLLLLKQQVSGLQVKEEAGAIKDAEIDKKLKAVNDLEVAVVELKRKNKELQYEKRELTVKLNAAESRVAELSNMTESEMVAKAKEEVSNLRHANEDLSKQVEGLQMNRFSEVEELVYLRWVNACLRYELKNHQAPSGRLSARDLSKNLSPKSQAKAKQLMLEYAGSERGQGDTDLESNFSHPSSPGSEDFDNASIDSFSSKYSSVSKKTSLIQKLKKWGKTKDDSSVLSSPSRSFSGSSPKRMSMSVKSRGPLESLMIRNASDSVAITTFGQGDQESIYSPETPNTASAGLRRVTSSDSLNSVASSFHLMSKSSVDASVDEKYPAYKDRHKLAMARESDLKEKAEKARVQKFGNSSNLNMTKIERDRPNISLPPKLSKIKEKPIVHASSNDQSEDGKNVENQTISKIKFADIEKRPTRVPRPPPKPSGGGSVSTNSNPANGIPSAPSIPPPPPRPPGGPPPPPGGPPPPPPLPRGLSKGAADDDKVHRAPQLVEFYQSLMKREAKKDTSSLLVSSTGNTSDARNNMIGEIENRSTFLLAVKADVETQGDFVTSLATEVRASSFSDIEDLVAFVNWLDEELSFLVDERAVLKHFDWPEGKADALREAAFEYQDLMKLENRVSTFVDDPKLSCEAALKKMYSLLEKVEQSVYALLRTRDMAISRYREFGIPINWLQDSGVVGKIKLSSVQLARKYMKRVASELDALSGPEKEPAREFLILQGVRFAFRVHQFAGGFDAESMKAFEDLRSRIQTPQAPQVGEEDSKQPET*