AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0483410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0483410 MtrunA17_Chr4g0000041 97.306 594 6 5 1 589 1 589 0.0 1164
Msa0483410 MtrunA17_Chr8g0379501 51.351 74 35 1 478 551 81 153 7.23e-14 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0483410 AT1G16720.1 82.869 502 85 1 88 589 98 598 0.0 867
Msa0483410 AT1G16720.2 77.757 535 85 2 88 589 98 631 0.0 851
Msa0483410 AT1G16720.3 82.112 464 82 1 88 551 98 560 0.0 793
Msa0483410 AT4G18810.2 29.258 458 258 22 139 551 113 549 4.72e-24 107
Msa0483410 AT4G18810.1 29.258 458 258 22 139 551 113 549 5.18e-24 107

Find 177 sgRNAs with CRISPR-Local

Find 479 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATACAACACTTTCACTTTC+AGG 0.166841 3_4:+192845 Msa0483410:CDS
CGTTGTTGTCGTCGTCGTTT+TGG 0.174964 3_4:-193000 None:intergenic
TAATCTATCTAAAGCATTTC+AGG 0.177804 3_4:+193864 Msa0483410:CDS
ATTCTCAGTGAACTCAAATT+TGG 0.188350 3_4:-194049 None:intergenic
CGTGCTTCCACGTACTAAAT+AGG 0.210340 3_4:-192551 None:intergenic
TTTGTCTTAGTTTCATGTTC+TGG 0.244048 3_4:+196541 Msa0483410:CDS
TTGGACATTACCTGTCTTCT+AGG 0.270556 3_4:-194721 None:intergenic
CTATCACTGGTGATCTCTTC+AGG 0.274699 3_4:+193821 Msa0483410:CDS
GAGAAGCTTTCAGCTAATAT+TGG 0.279017 3_4:+195519 Msa0483410:CDS
ATTCTAGAAGCTGGTCCTTC+AGG 0.280246 3_4:+194401 Msa0483410:CDS
GCCTTGGTATTGAGCCTTCC+AGG 0.286621 3_4:+196563 Msa0483410:CDS
ACAGCAGCCTTGACTGTGTT+TGG 0.292381 3_4:-193754 None:intergenic
TGTCAACTTCAAATCTGAAT+TGG 0.300935 3_4:-192653 None:intergenic
AGATATTACAGGGGACTAAT+TGG 0.315769 3_4:+198771 Msa0483410:three_prime_UTR
TCTTTGCCATCCCTGGTGTT+TGG 0.318685 3_4:-192962 None:intergenic
AAAGAAAATGTAGATATTAC+AGG 0.331116 3_4:+198760 Msa0483410:three_prime_UTR
AACCCCTGAGCATGAGTTTA+CGG 0.337945 3_4:-193285 None:intergenic
TTAGTTTCATGTTCTGGCCT+TGG 0.337954 3_4:+196547 Msa0483410:CDS
GAAGATTCCTTGAGAAGATC+TGG 0.343993 3_4:+196727 Msa0483410:CDS
CTTGCTGTCTTTGCCATCCC+TGG 0.353209 3_4:-192969 None:intergenic
TCTCCAGGCCAGGGATGTTC+AGG 0.370394 3_4:-197965 None:intergenic
TGCAAGAATTAGTACAAAAG+TGG 0.371055 3_4:+194451 Msa0483410:CDS
GTTCTCTCTGTTGGCGGCAA+TGG 0.376433 3_4:+194362 Msa0483410:CDS
AGTTCGTCCGGGTCCATTGC+AGG 0.386123 3_4:+196765 Msa0483410:CDS
GTTAATGTATGTACAAGAAA+AGG 0.389677 3_4:-194685 None:intergenic
AAATTTGAGTTCACTGAGAA+TGG 0.390202 3_4:+194051 Msa0483410:CDS
TAATCAGGTTGCCCACTTGC+CGG 0.392057 3_4:+197891 Msa0483410:intron
ACAAGAAAAGGGTCTAAAAC+TGG 0.404655 3_4:-194673 None:intergenic
GGACAACAATTCGACCTATA+CGG 0.404869 3_4:-193264 None:intergenic
ACCGGACGAAATGATGAAAA+TGG 0.406247 3_4:-194637 None:intergenic
TTCTAGAAGCTGGTCCTTCA+GGG 0.411008 3_4:+194402 Msa0483410:CDS
GGGTCTAAAACTGGATGATC+TGG 0.417511 3_4:-194664 None:intergenic
TCATGATAGGTATGAGGGCT+TGG 0.424833 3_4:+194340 Msa0483410:intron
AATACTACTGTACTTGTTGT+TGG 0.426072 3_4:+193232 Msa0483410:CDS
CTGAATCTTCACTGGATGGA+TGG 0.426462 3_4:+193962 Msa0483410:CDS
TTGGAGAAAATTCTCTGGAC+TGG 0.426876 3_4:+193108 Msa0483410:CDS
CTGGACTGGGTCAGATCTCT+AGG 0.427807 3_4:+193122 Msa0483410:CDS
GACTGACAACTGACAGGAAT+CGG 0.427951 3_4:-192631 None:intergenic
GTTGGTGCTACTAGCCGTAT+AGG 0.435219 3_4:+193250 Msa0483410:CDS
TGTTTCTTGCAGTTGAATCA+TGG 0.435790 3_4:-197659 None:intergenic
GAGTGCCTTCACACATATAT+CGG 0.436679 3_4:-197637 None:intergenic
TGGATACACAATAGTTCGTC+CGG 0.437257 3_4:+196753 Msa0483410:CDS
AGATAGTTATTTGCTTTGTC+CGG 0.438211 3_4:-197910 None:intergenic
ATTTAAATCTGAATCTTCAC+TGG 0.438895 3_4:+193954 Msa0483410:CDS
TTAGGGTATGTCTTCAATAG+AGG 0.440898 3_4:+194185 Msa0483410:intron
TTGTCCGTAAACTCATGCTC+AGG 0.442258 3_4:+193281 Msa0483410:CDS
GGCAGATATTCGATGAGGTT+TGG 0.442586 3_4:+193089 Msa0483410:CDS
TCAGGATCACAACAATCAAT+TGG 0.444558 3_4:+193882 Msa0483410:CDS
GTGCTTCCACGTACTAAATA+GGG 0.444643 3_4:-192550 None:intergenic
GCTGAAAGCTTCTCGAATCC+TGG 0.446728 3_4:-195510 None:intergenic
GAGATAGTGATTGGGGATGT+TGG 0.447831 3_4:+193727 Msa0483410:CDS
AACAAATGAACCTACCCTCT+TGG 0.448430 3_4:-196605 None:intergenic
AATTGGCTCAGTTGCGCGCT+GGG 0.448540 3_4:+193899 Msa0483410:CDS
GTGTTTGGAGCAGCGGCTAT+AGG 0.454033 3_4:-192947 None:intergenic
ACAGTCAAGGCTGCTGTAGA+AGG 0.459186 3_4:+193760 Msa0483410:CDS
GAGGTTTGGAGAAAATTCTC+TGG 0.460565 3_4:+193103 Msa0483410:CDS
TCCTTGAGAAGATCTGGGCT+TGG 0.460859 3_4:+196733 Msa0483410:CDS
ATGTGTGAGTTTGCCATCCC+TGG 0.462288 3_4:+193202 Msa0483410:CDS
AGGTCAGTAGAGATAGTGAT+TGG 0.469344 3_4:+193718 Msa0483410:CDS
TTGTACATACATTAACAATA+CGG 0.470364 3_4:+194692 Msa0483410:CDS
TTGTAGGAGGTATGTTCTCC+AGG 0.472948 3_4:-197980 None:intergenic
AAATACAATTTACTCTGACT+TGG 0.474303 3_4:-194428 None:intergenic
GGAGGTATGTTCTCCAGGCC+AGG 0.475726 3_4:-197975 None:intergenic
TTTAAGAACTTGCTCCCGCC+TGG 0.479129 3_4:-196581 None:intergenic
CATCTGTCATGATAGGTATG+AGG 0.480362 3_4:+194334 Msa0483410:intron
GACGTCAACCCTGTGGGACT+TGG 0.481549 3_4:+193055 Msa0483410:CDS
GACACCAGCTCTCTCTGTCT+TGG 0.482972 3_4:+197933 Msa0483410:CDS
ACATGAAACTAAGACAAAAT+CGG 0.484449 3_4:-196536 None:intergenic
TATGTATTAATTCTAGAAGC+TGG 0.484676 3_4:+194392 Msa0483410:CDS
ATTAGAGCACGCTGCCCACC+AGG 0.489698 3_4:-197371 None:intergenic
TGGAGAAAATTCTCTGGACT+GGG 0.490104 3_4:+193109 Msa0483410:CDS
CAATTGGCTCAGTTGCGCGC+TGG 0.490703 3_4:+193898 Msa0483410:CDS
ATCCCTGGTGTTTGGAGCAG+CGG 0.491895 3_4:-192954 None:intergenic
TACGAGTACGTTGCTGAGGA+TGG 0.493701 3_4:+197776 Msa0483410:CDS
GAGGGCTTGGTTCTCTCTGT+TGG 0.494157 3_4:+194353 Msa0483410:CDS
ATACCTGAACATCCCTGGCC+TGG 0.496705 3_4:+197962 Msa0483410:exon
TGAATCTTCACTGGATGGAT+GGG 0.497784 3_4:+193963 Msa0483410:CDS
GGTCAGTAGAGATAGTGATT+GGG 0.500030 3_4:+193719 Msa0483410:CDS
GCAAGAATTAGTACAAAAGT+GGG 0.501200 3_4:+194452 Msa0483410:CDS
TTAATGTATGTACAAGAAAA+GGG 0.503140 3_4:-194684 None:intergenic
GATCGCTCGCAATTGCCAAT+TGG 0.504803 3_4:-192684 None:intergenic
TGGTATTGAGCCTTCCAGGC+GGG 0.505603 3_4:+196567 Msa0483410:CDS
ATCACCAGTGATAGTTGAGC+GGG 0.506989 3_4:-193812 None:intergenic
TAGCCGCTGCTCCAAACACC+AGG 0.507877 3_4:+192951 Msa0483410:CDS
CGCTCGCAATTGCCAATTGG+AGG 0.507964 3_4:-192681 None:intergenic
AAATCATAGTAATTACACTT+TGG 0.508911 3_4:+198853 Msa0483410:three_prime_UTR
ATCACTATCTCTACTGACCT+TGG 0.510201 3_4:-193715 None:intergenic
GCTTCTAGAATTAATACATA+AGG 0.513253 3_4:-194389 None:intergenic
CTGCAATGAAGGCTTTGGTA+AGG 0.516682 3_4:+193662 Msa0483410:intron
CTTTGGGTAGTACTCTTGAC+AGG 0.517774 3_4:+194243 Msa0483410:CDS
TATCACTGGTGATCTCTTCA+GGG 0.525143 3_4:+193822 Msa0483410:CDS
CAGTCGTTGTACAGAGGAGC+GGG 0.528087 3_4:-192921 None:intergenic
AAGATTCCTTGAGAAGATCT+GGG 0.529508 3_4:+196728 Msa0483410:CDS
GATCTTCGACCAAGTCCCAC+AGG 0.531721 3_4:-193064 None:intergenic
GTAGTTACCTCAAAATATGA+TGG 0.532512 3_4:+194015 Msa0483410:CDS
AAAAGAAACTGTACCTGCAA+TGG 0.533749 3_4:-196778 None:intergenic
AACTGTACCTGCAATGGACC+CGG 0.533940 3_4:-196772 None:intergenic
ATCAAGGAGACAGAATATCT+CGG 0.538498 3_4:+197399 Msa0483410:CDS
GTTGACACAAGTCCTCCAAT+TGG 0.538762 3_4:+192669 Msa0483410:five_prime_UTR
ACTGGATGATCTGGTTTCAC+CGG 0.539360 3_4:-194655 None:intergenic
TGTCCGTAAACTCATGCTCA+GGG 0.540648 3_4:+193282 Msa0483410:CDS
ACAGTAGTATTCTGAGCACC+AGG 0.541242 3_4:-193220 None:intergenic
CTCTGACTTGGATCCCCTGA+AGG 0.545090 3_4:-194416 None:intergenic
GAATTGGACTGACAACTGAC+AGG 0.546532 3_4:-192637 None:intergenic
AAGGAAGGCAGATGAAGAGG+TGG 0.546607 3_4:+193681 Msa0483410:CDS
GTCAGTAGAGATAGTGATTG+GGG 0.546856 3_4:+193720 Msa0483410:CDS
GAAAGTAGTGTTGATTTGTG+AGG 0.548084 3_4:-192873 None:intergenic
TATTTGCTTTGTCCGGCAAG+TGG 0.553339 3_4:-197903 None:intergenic
TGGGAATGAGCTTTATGAGC+TGG 0.553677 3_4:+197796 Msa0483410:CDS
AGTGATAGTTGAGCGGGCAG+TGG 0.554082 3_4:-193806 None:intergenic
GGCTTGGTTCTCTCTGTTGG+CGG 0.554436 3_4:+194356 Msa0483410:CDS
AGGTGGTAGAGCTGCTTCCA+AGG 0.555546 3_4:+193698 Msa0483410:CDS
GACTATACGTACTGATGATG+TGG 0.555620 3_4:+193144 Msa0483410:CDS
AAATCTGAATCTTCACTGGA+TGG 0.556032 3_4:+193958 Msa0483410:CDS
ACGAGTACGTTGCTGAGGAT+GGG 0.556225 3_4:+197777 Msa0483410:CDS
AGAACTTGCTCCCGCCTGGA+AGG 0.556592 3_4:-196577 None:intergenic
TCAAGGAGACAGAATATCTC+GGG 0.556593 3_4:+197400 Msa0483410:CDS
GAAGAATACCTGAACATCCC+TGG 0.556642 3_4:+197957 Msa0483410:exon
ATCTGTCATGATAGGTATGA+GGG 0.558247 3_4:+194335 Msa0483410:intron
AGTAAATGCGTCAAAGAACC+AGG 0.559462 3_4:+195492 Msa0483410:CDS
GACGGAACCTTACTTGTAGG+AGG 0.563579 3_4:-197993 None:intergenic
GCTCAGGGGTTACTCTGTCA+AGG 0.566034 3_4:+193297 Msa0483410:CDS
ACGGTTTGAGCCTAGAAGAC+AGG 0.567499 3_4:+194711 Msa0483410:CDS
GATGCTCTTCTTGTTCGTGA+AGG 0.569216 3_4:+193175 Msa0483410:CDS
ACTGCCCGCTCAACTATCAC+TGG 0.569404 3_4:+193808 Msa0483410:CDS
CTCAAAATATGATGGAGGGA+TGG 0.571128 3_4:+194023 Msa0483410:CDS
TTCTCCAAGACAGAGAGAGC+TGG 0.571260 3_4:-197937 None:intergenic
GCTGCTCCAAACACCAGGGA+TGG 0.572532 3_4:+192956 Msa0483410:CDS
GCCTGGAAGGCTCAATACCA+AGG 0.575877 3_4:-196564 None:intergenic
AGCAAGTTCTTAAAGCCAAG+AGG 0.576792 3_4:+196590 Msa0483410:CDS
CGTGCTCTAATATTTGATCA+AGG 0.579384 3_4:+197383 Msa0483410:CDS
AAGAAAATGTAGATATTACA+GGG 0.581726 3_4:+198761 Msa0483410:three_prime_UTR
TTTGGAGCAGCGGCTATAGG+AGG 0.582108 3_4:-192944 None:intergenic
CTATTTAGTACGTGGAAGCA+CGG 0.584626 3_4:+192552 Msa0483410:five_prime_UTR
ATTTGCTTTGTCCGGCAAGT+GGG 0.589515 3_4:-197902 None:intergenic
GGGTATGTCTTCAATAGAGG+TGG 0.590645 3_4:+194188 Msa0483410:intron
GTTACCTCAAAATATGATGG+AGG 0.594354 3_4:+194018 Msa0483410:CDS
GGTAAGGAAGGCAGATGAAG+AGG 0.596194 3_4:+193678 Msa0483410:CDS
AATGAAGGCTTTGGTAAGGA+AGG 0.596671 3_4:+193666 Msa0483410:intron
GGGATGGCAAACTCACACAT+AGG 0.598239 3_4:-193199 None:intergenic
GAGGTATGTTCTCCAGGCCA+GGG 0.602858 3_4:-197974 None:intergenic
GCAAGTTCTTAAAGCCAAGA+GGG 0.604143 3_4:+196591 Msa0483410:CDS
GACAACTGACAGGAATCGGA+TGG 0.607102 3_4:-192627 None:intergenic
AGTAGTGTTGATTTGTGAGG+AGG 0.608720 3_4:-192870 None:intergenic
GGATACACAATAGTTCGTCC+GGG 0.610507 3_4:+196754 Msa0483410:CDS
GCAGCAATTGTTGTTGCTGA+AGG 0.611171 3_4:-192791 None:intergenic
GGGCATCAGTTGTGCTGATG+TGG 0.616066 3_4:+197614 Msa0483410:intron
TGGGACTTGGTCGAAGATCG+CGG 0.620126 3_4:+193068 Msa0483410:CDS
CTCTTCAGGGTTGATCAGCA+AGG 0.623616 3_4:+193835 Msa0483410:CDS
AGTATTCTGAGCACCAGGGA+TGG 0.632012 3_4:-193215 None:intergenic
TATGAAAACACCTACAGGCA+AGG 0.632269 3_4:-195554 None:intergenic
TTACCTCAAAATATGATGGA+GGG 0.640633 3_4:+194019 Msa0483410:CDS
TCCAAGCCCAGATCTTCTCA+AGG 0.642912 3_4:-196734 None:intergenic
CTCGACGACGTCAACCCTGT+GGG 0.648664 3_4:+193049 Msa0483410:CDS
AGGAGGCAGTCGTTGTACAG+AGG 0.649342 3_4:-192927 None:intergenic
TCTAGAAGCTGGTCCTTCAG+GGG 0.650111 3_4:+194403 Msa0483410:CDS
ATCTTCGACCAAGTCCCACA+GGG 0.651382 3_4:-193063 None:intergenic
TGGTGATCCAAACACAGTCA+AGG 0.654891 3_4:+193747 Msa0483410:CDS
ATGTTACGAGTACGTTGCTG+AGG 0.656759 3_4:+197772 Msa0483410:CDS
ATAATGAATTGAAAATGCAG+TGG 0.657643 3_4:-192716 None:intergenic
AACACTCCCTATTTAGTACG+TGG 0.661051 3_4:+192544 Msa0483410:five_prime_UTR
GATCACCAGTGATAGTTGAG+CGG 0.662278 3_4:-193813 None:intergenic
GCAGTCGTTGTACAGAGGAG+CGG 0.662658 3_4:-192922 None:intergenic
TCTCGACGACGTCAACCCTG+TGG 0.668504 3_4:+193048 Msa0483410:CDS
GCTGACAGGAAGAACCTGGT+GGG 0.669326 3_4:+197357 Msa0483410:intron
TATACGTACTGATGATGTGG+AGG 0.669817 3_4:+193147 Msa0483410:CDS
TTGGTATTGAGCCTTCCAGG+CGG 0.672929 3_4:+196566 Msa0483410:CDS
TGCTGACAGGAAGAACCTGG+TGG 0.676407 3_4:+197356 Msa0483410:intron
AATTGTTGTTGCTGAAGGTG+AGG 0.678588 3_4:-192786 None:intergenic
CTGTCAAGAGTACTACCCAA+AGG 0.683886 3_4:-194242 None:intergenic
GATGGATGGGAAGTTCGTCA+AGG 0.684473 3_4:+193976 Msa0483410:CDS
ATCGCGGCAGATATTCGATG+AGG 0.685359 3_4:+193084 Msa0483410:CDS
GTCCGTAAACTCATGCTCAG+GGG 0.688942 3_4:+193283 Msa0483410:CDS
AGCCGCTGCTCCAAACACCA+GGG 0.697507 3_4:+192952 Msa0483410:CDS
CAGTAGTATTCTGAGCACCA+GGG 0.701255 3_4:-193219 None:intergenic
TGTGGCCGATATATGTGTGA+AGG 0.705155 3_4:+197632 Msa0483410:CDS
AGAAAATGTAGATATTACAG+GGG 0.712636 3_4:+198762 Msa0483410:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAAAAATAAAATATA+GGG - chr3_4:194167-194186 None:intergenic 0.0%
!! TAAAATTAAAAATAAAATAT+AGG - chr3_4:194168-194187 None:intergenic 0.0%
!!! TATATTTTATTTTTAATTTT+AGG + chr3_4:194167-194186 Msa0483410:intron 0.0%
!!! ATATTTTATTTTTAATTTTA+GGG + chr3_4:194168-194187 Msa0483410:intron 0.0%
!! ATATGTATGTATAAATAAAA+TGG + chr3_4:193496-193515 Msa0483410:intron 10.0%
!! ATTTAATAAATTACATTAGA+AGG + chr3_4:194865-194884 Msa0483410:intron 10.0%
!!! ATTATTTATCTTTATTGATT+TGG + chr3_4:196039-196058 Msa0483410:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - chr3_4:197226-197245 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr3_4:197227-197246 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_4:195357-195376 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_4:195357-195376 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_4:195357-195376 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_4:195357-195376 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_4:195357-195376 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_4:195357-195376 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_4:195357-195376 None:intergenic 100.0%
!! AATATCCAATAACATAATTA+AGG - chr3_4:193552-193571 None:intergenic 15.0%
!! ACAAATTTAAGTAAAAGATT+CGG - chr3_4:194760-194779 None:intergenic 15.0%
!!! TTTTTATCTTTTATACTATG+AGG - chr3_4:195016-195035 None:intergenic 15.0%
!!! AGATAAAAAAATGTTGTTTT+AGG + chr3_4:195027-195046 Msa0483410:intron 15.0%
!!! TTTTCTTATAATAAAATGCA+AGG + chr3_4:195772-195791 Msa0483410:intron 15.0%
!!! AGTTTTCAATTTAAAATACT+TGG + chr3_4:196092-196111 Msa0483410:intron 15.0%
!!! GTTTTCAATTTAAAATACTT+GGG + chr3_4:196093-196112 Msa0483410:intron 15.0%
!! TTTAAATACATTCACAAAAT+TGG - chr3_4:196908-196927 None:intergenic 15.0%
!! AATTAGAGTTATATTGTATT+GGG - chr3_4:197161-197180 None:intergenic 15.0%
!! TAATTAGAGTTATATTGTAT+TGG - chr3_4:197162-197181 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr3_4:197225-197244 None:intergenic 15.0%
!!! TTCAATTTTTCAAAAATCAA+AGG - chr3_4:198133-198152 None:intergenic 15.0%
!! ATCAATAAATAAATTGCATT+AGG + chr3_4:198172-198191 Msa0483410:intron 15.0%
!! ACATATATCAAAATATAATG+TGG + chr3_4:198461-198480 Msa0483410:intron 15.0%
!! AAAATTGAATGGAAATAATA+CGG - chr3_4:198545-198564 None:intergenic 15.0%
!! TTAAGTATTCATTTAAATTG+TGG + chr3_4:198617-198636 Msa0483410:intron 15.0%
!!! AATATCTACATTTTCTTTTT+TGG - chr3_4:198758-198777 None:intergenic 15.0%
!!! ATAAAATGGTTAATTTTCCT+TGG + chr3_4:193510-193529 Msa0483410:intron 20.0%
!! ATTCACCTTAATTATGTTAT+TGG + chr3_4:193544-193563 Msa0483410:intron 20.0%
!! AATAATCTTGCAAAAAATGT+TGG - chr3_4:194120-194139 None:intergenic 20.0%
!! TTAATGTATGTACAAGAAAA+GGG - chr3_4:194687-194706 None:intergenic 20.0%
!! TTGTACATACATTAACAATA+CGG + chr3_4:194692-194711 Msa0483410:CDS 20.0%
!!! TTAAATTTGTCTTCTGTTTT+TGG + chr3_4:194770-194789 Msa0483410:intron 20.0%
!! ACTTGTAAGGAAAAATAAAA+GGG - chr3_4:195126-195145 None:intergenic 20.0%
!! TACTTGTAAGGAAAAATAAA+AGG - chr3_4:195127-195146 None:intergenic 20.0%
!! TTCTATAATTCTGTTACTAA+TGG - chr3_4:195181-195200 None:intergenic 20.0%
!!! AGGTATATTGATTGATATTT+TGG + chr3_4:196225-196244 Msa0483410:intron 20.0%
!! TGCATTGGATTAATTATTAA+TGG + chr3_4:196832-196851 Msa0483410:intron 20.0%
!! AATTATTAATGGCTTAAGAT+TGG + chr3_4:196843-196862 Msa0483410:intron 20.0%
!!! GACACTTTTTTTTAGTAAAT+GGG - chr3_4:197092-197111 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - chr3_4:197129-197148 None:intergenic 20.0%
!! AAAGTGGAATATATTGAATT+GGG - chr3_4:197202-197221 None:intergenic 20.0%
!! CAATAATCAAAATTGTTTAC+GGG - chr3_4:197552-197571 None:intergenic 20.0%
!! CCAATAATCAAAATTGTTTA+CGG - chr3_4:197553-197572 None:intergenic 20.0%
!!! ATTTTGATTATTGGAATAAC+TGG + chr3_4:197559-197578 Msa0483410:intron 20.0%
!!! TGAAAATGTTAAGTTTCTTT+TGG - chr3_4:197739-197758 None:intergenic 20.0%
!!! ATTTTTCTGTATATATTCAC+AGG + chr3_4:198061-198080 Msa0483410:intron 20.0%
!! AAAGAAAATGTAGATATTAC+AGG + chr3_4:198760-198779 Msa0483410:three_prime_UTR 20.0%
!! AAGAAAATGTAGATATTACA+GGG + chr3_4:198761-198780 Msa0483410:three_prime_UTR 20.0%
! ATAATGAATTGAAAATGCAG+TGG - chr3_4:192719-192738 None:intergenic 25.0%
!! AGATTGATTTAGAAACTAAC+TGG - chr3_4:193386-193405 None:intergenic 25.0%
!! AGTTAGTTTCTAAATCAATC+TGG + chr3_4:193385-193404 Msa0483410:intron 25.0%
!! GTTAGTTTCTAAATCAATCT+GGG + chr3_4:193386-193405 Msa0483410:intron 25.0%
! TTAGTTTCTAAATCAATCTG+GGG + chr3_4:193387-193406 Msa0483410:intron 25.0%
!! TTTGATTGGCTAAAAAACAT+GGG - chr3_4:193433-193452 None:intergenic 25.0%
! GAATGTGAAATTGCTAAATA+TGG - chr3_4:193461-193480 None:intergenic 25.0%
! TCAAATCATTTCTGACAAAT+CGG - chr3_4:193597-193616 None:intergenic 25.0%
!! TAATCTATCTAAAGCATTTC+AGG + chr3_4:193864-193883 Msa0483410:CDS 25.0%
! ATTTAAATCTGAATCTTCAC+TGG + chr3_4:193954-193973 Msa0483410:CDS 25.0%
!!! GCTTCTAGAATTAATACATA+AGG - chr3_4:194392-194411 None:intergenic 25.0%
!! TATGTATTAATTCTAGAAGC+TGG + chr3_4:194392-194411 Msa0483410:CDS 25.0%
! AAATACAATTTACTCTGACT+TGG - chr3_4:194431-194450 None:intergenic 25.0%
!! AAGAATCATTCTCATTTTAG+TGG + chr3_4:194487-194506 Msa0483410:intron 25.0%
! GTTAATGTATGTACAAGAAA+AGG - chr3_4:194688-194707 None:intergenic 25.0%
! TAAAAGATTCGGAAACAATA+AGG - chr3_4:194749-194768 None:intergenic 25.0%
! AAATAGTATTTAATCACCAC+TGG + chr3_4:194892-194911 Msa0483410:intron 25.0%
! TTGTAAGGAAAAATAAAAGG+GGG - chr3_4:195124-195143 None:intergenic 25.0%
! CTTGTAAGGAAAAATAAAAG+GGG - chr3_4:195125-195144 None:intergenic 25.0%
! TAACAAAAGCAAGTAAATAG+GGG - chr3_4:195329-195348 None:intergenic 25.0%
! GTAACAAAAGCAAGTAAATA+GGG - chr3_4:195330-195349 None:intergenic 25.0%
! TGTAACAAAAGCAAGTAAAT+AGG - chr3_4:195331-195350 None:intergenic 25.0%
!!! TTTCGTATGACTTTTTTCTT+TGG + chr3_4:195994-196013 Msa0483410:intron 25.0%
! TTAAATTGAAAACTATCAGC+AGG - chr3_4:196086-196105 None:intergenic 25.0%
! TTATTGACACTCTTTCATTT+AGG + chr3_4:196205-196224 Msa0483410:intron 25.0%
!!! TATTTTGGAGAAAATCATGA+AGG + chr3_4:196240-196259 Msa0483410:intron 25.0%
!!! ATTTTGGAGAAAATCATGAA+GGG + chr3_4:196241-196260 Msa0483410:intron 25.0%
! ACATGAAACTAAGACAAAAT+CGG - chr3_4:196539-196558 None:intergenic 25.0%
!!! ATGTTCCTTTTTGTTATGTT+TGG + chr3_4:196674-196693 Msa0483410:intron 25.0%
! CATTCAAAAACATATTCTAC+CGG - chr3_4:196812-196831 None:intergenic 25.0%
!!! ATATGTTTTTGAATGTGCAT+TGG + chr3_4:196817-196836 Msa0483410:intron 25.0%
!! TAATATTGAGTGGATTTAGA+GGG - chr3_4:196982-197001 None:intergenic 25.0%
! TAAATCCACTCAATATTAGA+GGG + chr3_4:196984-197003 Msa0483410:intron 25.0%
!!! GGACACTTTTTTTTAGTAAA+TGG - chr3_4:197093-197112 None:intergenic 25.0%
! GAAAGTGGAATATATTGAAT+TGG - chr3_4:197203-197222 None:intergenic 25.0%
!!! TTCTTGTTTTTAGGTTTCTT+CGG + chr3_4:197492-197511 Msa0483410:intron 25.0%
!!! CCGTAAACAATTTTGATTAT+TGG + chr3_4:197550-197569 Msa0483410:intron 25.0%
! TGCCAAATGTCATAATTTAT+AGG + chr3_4:197593-197612 Msa0483410:intron 25.0%
! GCCAAATGTCATAATTTATA+GGG + chr3_4:197594-197613 Msa0483410:intron 25.0%
!!! GATTATTTTTGTGTCTAATC+AGG + chr3_4:197876-197895 Msa0483410:intron 25.0%
!! AATTTAACTGTGCAGATTTT+AGG - chr3_4:198090-198109 None:intergenic 25.0%
!! AGTGTAAAAATACCGAATTT+TGG + chr3_4:198223-198242 Msa0483410:intron 25.0%
!! TGTTTCTCTAAAAATACCTT+TGG + chr3_4:198248-198267 Msa0483410:intron 25.0%
! GTAGTATACACAAAATTGAA+TGG - chr3_4:198556-198575 None:intergenic 25.0%
! AGTATTCATTTAAATTGTGG+TGG + chr3_4:198620-198639 Msa0483410:intron 25.0%
! AGAAAATGTAGATATTACAG+GGG + chr3_4:198762-198781 Msa0483410:three_prime_UTR 25.0%
! GGAATTCATCATATTTTGTG+TGG + chr3_4:192573-192592 Msa0483410:five_prime_UTR 30.0%
TGTCAACTTCAAATCTGAAT+TGG - chr3_4:192656-192675 None:intergenic 30.0%
AATACAACACTTTCACTTTC+AGG + chr3_4:192845-192864 Msa0483410:CDS 30.0%
!! AATACTACTGTACTTGTTGT+TGG + chr3_4:193232-193251 Msa0483410:CDS 30.0%
AACTAACTGGTCATCAATTA+TGG - chr3_4:193373-193392 None:intergenic 30.0%
! GTTTGATTGGCTAAAAAACA+TGG - chr3_4:193434-193453 None:intergenic 30.0%
! TAAATATGGTGGTGTTTGAT+TGG - chr3_4:193447-193466 None:intergenic 30.0%
TGTGAAATTGCTAAATATGG+TGG - chr3_4:193458-193477 None:intergenic 30.0%
GACAGTTTCAAAACATAAAC+TGG + chr3_4:193615-193634 Msa0483410:intron 30.0%
!! ATCAACTTTTTCTGCAATGA+AGG + chr3_4:193651-193670 Msa0483410:intron 30.0%
GTAGTTACCTCAAAATATGA+TGG + chr3_4:194015-194034 Msa0483410:CDS 30.0%
! TTACCTCAAAATATGATGGA+GGG + chr3_4:194019-194038 Msa0483410:CDS 30.0%
ATTCTCAGTGAACTCAAATT+TGG - chr3_4:194052-194071 None:intergenic 30.0%
! AAATTTGAGTTCACTGAGAA+TGG + chr3_4:194051-194070 Msa0483410:CDS 30.0%
AAAAAAGCTTTCTCTACCTT+TGG + chr3_4:194226-194245 Msa0483410:CDS 30.0%
AAAAAGCTTTCTCTACCTTT+GGG + chr3_4:194227-194246 Msa0483410:CDS 30.0%
TGCAAGAATTAGTACAAAAG+TGG + chr3_4:194451-194470 Msa0483410:CDS 30.0%
GCAAGAATTAGTACAAAAGT+GGG + chr3_4:194452-194471 Msa0483410:CDS 30.0%
! TACAAAAGTGGGATTTTGTA+GGG + chr3_4:194463-194482 Msa0483410:CDS 30.0%
ATTCGGAAACAATAAGGTAT+TGG - chr3_4:194743-194762 None:intergenic 30.0%
AAAGCCAGTTATTGAACTAA+TGG - chr3_4:194969-194988 None:intergenic 30.0%
!!! ATGTTGTTTTAGGACATTCA+AGG + chr3_4:195037-195056 Msa0483410:intron 30.0%
TAAAAGTTGTTACTAGACAG+AGG - chr3_4:195079-195098 None:intergenic 30.0%
TGTAAGGAAAAATAAAAGGG+GGG - chr3_4:195123-195142 None:intergenic 30.0%
TTAGAAACCAAGCAATAGTT+AGG + chr3_4:195284-195303 Msa0483410:intron 30.0%
AACAAAAGCAAGTAAATAGG+GGG - chr3_4:195328-195347 None:intergenic 30.0%
! TCTGAAACAAGAGTGAATAT+AGG - chr3_4:195462-195481 None:intergenic 30.0%
! TATATTCACTCTTGTTTCAG+AGG + chr3_4:195461-195480 Msa0483410:intron 30.0%
AAATGTATGAAAACACCTAC+AGG - chr3_4:195562-195581 None:intergenic 30.0%
ATATGCTTGTCTAATGTTCA+TGG + chr3_4:195619-195638 Msa0483410:intron 30.0%
TTTCTATCTTCTTGAAGATG+TGG + chr3_4:195867-195886 Msa0483410:intron 30.0%
GAGTTGAAGTTTATAAGACA+TGG - chr3_4:195911-195930 None:intergenic 30.0%
ATGTAACATAACAGCATCAA+AGG - chr3_4:195951-195970 None:intergenic 30.0%
! CAATTTAAAATACTTGGGTC+TGG + chr3_4:196098-196117 Msa0483410:intron 30.0%
GTGTCAATAAGTGATTATTG+CGG - chr3_4:196195-196214 None:intergenic 30.0%
GAAAAGAAGAATGCATAACT+AGG + chr3_4:196411-196430 Msa0483410:intron 30.0%
CAATAGAATATACATCTTCC+AGG - chr3_4:196439-196458 None:intergenic 30.0%
TCACATGCAAAACTTACATT+AGG - chr3_4:196492-196511 None:intergenic 30.0%
TTTGTCTTAGTTTCATGTTC+TGG + chr3_4:196541-196560 Msa0483410:CDS 30.0%
! CTAATATTGAGTGGATTTAG+AGG - chr3_4:196983-197002 None:intergenic 30.0%
CTAAATCCACTCAATATTAG+AGG + chr3_4:196983-197002 Msa0483410:intron 30.0%
AAATCCACTCAATATTAGAG+GGG + chr3_4:196985-197004 Msa0483410:intron 30.0%
! AGTATTTGGTTTAGGGTATA+TGG - chr3_4:197047-197066 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr3_4:197218-197237 None:intergenic 30.0%
!!! CATACACGTTTCTTGTTTTT+AGG + chr3_4:197483-197502 Msa0483410:intron 30.0%
GCCCTATAAATTATGACATT+TGG - chr3_4:197598-197617 None:intergenic 30.0%
! TAACATTTTCAACCTTGTCT+AGG + chr3_4:197748-197767 Msa0483410:intron 30.0%
TGAATGCAGATTAGATCAAA+AGG - chr3_4:197848-197867 None:intergenic 30.0%
! TTTTGATCTAATCTGCATTC+AGG + chr3_4:197847-197866 Msa0483410:intron 30.0%
TTTGATCTAATCTGCATTCA+GGG + chr3_4:197848-197867 Msa0483410:intron 30.0%
AGATAGTTATTTGCTTTGTC+CGG - chr3_4:197913-197932 None:intergenic 30.0%
TAGAAGTAGAAGCAATTTGA+CGG - chr3_4:198014-198033 None:intergenic 30.0%
TAGAGAAACAAGCCAAAATT+CGG - chr3_4:198238-198257 None:intergenic 30.0%
TTGATATATGTATCATCCCT+TGG - chr3_4:198452-198471 None:intergenic 30.0%
!! TTGAACATTGACTCATTTAC+AGG + chr3_4:198656-198675 Msa0483410:intron 30.0%
! TCATCATATTTTGTGTGGCT+TGG + chr3_4:192578-192597 Msa0483410:five_prime_UTR 35.0%
!! GAAAGTAGTGTTGATTTGTG+AGG - chr3_4:192876-192895 None:intergenic 35.0%
! ATCAATCTGGGGTACAAAAA+AGG + chr3_4:193398-193417 Msa0483410:intron 35.0%
GTGAATTGTCTTCTAAACCA+AGG - chr3_4:193530-193549 None:intergenic 35.0%
! TTTTTCTGCAATGAAGGCTT+TGG + chr3_4:193657-193676 Msa0483410:intron 35.0%
TCAGGATCACAACAATCAAT+TGG + chr3_4:193882-193901 Msa0483410:CDS 35.0%
AAATCTGAATCTTCACTGGA+TGG + chr3_4:193958-193977 Msa0483410:CDS 35.0%
GTTACCTCAAAATATGATGG+AGG + chr3_4:194018-194037 Msa0483410:CDS 35.0%
AGGGGTAAAATCAGAATTTC+AGG - chr3_4:194148-194167 None:intergenic 35.0%
TTAGGGTATGTCTTCAATAG+AGG + chr3_4:194185-194204 Msa0483410:intron 35.0%
ATGAGTTCATCTGTCATGAT+AGG + chr3_4:194327-194346 Msa0483410:intron 35.0%
ATCTGTCATGATAGGTATGA+GGG + chr3_4:194335-194354 Msa0483410:intron 35.0%
! GTACAAAAGTGGGATTTTGT+AGG + chr3_4:194462-194481 Msa0483410:CDS 35.0%
!! TTCTCATTTTAGTGGCTCTA+TGG + chr3_4:194495-194514 Msa0483410:intron 35.0%
! ACCATTTTCATCATTTCGTC+CGG + chr3_4:194636-194655 Msa0483410:CDS 35.0%
! ACAAGAAAAGGGTCTAAAAC+TGG - chr3_4:194676-194695 None:intergenic 35.0%
CTTTCCGAACCTTTGTAATA+GGG + chr3_4:194990-195009 Msa0483410:intron 35.0%
GACTCTAAGTGATACTTGTA+AGG - chr3_4:195139-195158 None:intergenic 35.0%
! TCTGTTACTAATGGACGTAA+TGG - chr3_4:195172-195191 None:intergenic 35.0%
AAGTAAAACAGGTTTGTGGT+GGG - chr3_4:195241-195260 None:intergenic 35.0%
TAAGTAAAACAGGTTTGTGG+TGG - chr3_4:195242-195261 None:intergenic 35.0%
! ACCACAAACCTGTTTTACTT+AGG + chr3_4:195241-195260 Msa0483410:intron 35.0%
TCCTAAGTAAAACAGGTTTG+TGG - chr3_4:195245-195264 None:intergenic 35.0%
AGAATGGTCCTAAGTAAAAC+AGG - chr3_4:195252-195271 None:intergenic 35.0%
CTTATTGCCTAACTATTGCT+TGG - chr3_4:195294-195313 None:intergenic 35.0%
ACAAAAGCAAGTAAATAGGG+GGG - chr3_4:195327-195346 None:intergenic 35.0%
GAGAAGCTTTCAGCTAATAT+TGG + chr3_4:195519-195538 Msa0483410:CDS 35.0%
TATATAAAAGCCTTGCCTGT+AGG + chr3_4:195544-195563 Msa0483410:intron 35.0%
AAATGTTCAGAGCGATGATA+AGG + chr3_4:195729-195748 Msa0483410:intron 35.0%
AAAATGCAAGGATACCAACA+AGG + chr3_4:195784-195803 Msa0483410:intron 35.0%
! GGACAAGCTTTTAGTAAAAC+TGG + chr3_4:196165-196184 Msa0483410:intron 35.0%
TCAGATTACTAGAATCAAGC+AGG - chr3_4:196386-196405 None:intergenic 35.0%
GGTGACCAAACATAACAAAA+AGG - chr3_4:196682-196701 None:intergenic 35.0%
AAGATTCCTTGAGAAGATCT+GGG + chr3_4:196728-196747 Msa0483410:CDS 35.0%
AAAAGAAACTGTACCTGCAA+TGG - chr3_4:196781-196800 None:intergenic 35.0%
GATTTAGAGGGAAAGAAGAT+GGG - chr3_4:196941-196960 None:intergenic 35.0%
GATTTAGAGGGAAAGAAGAT+GGG - chr3_4:196941-196960 None:intergenic 35.0%
! TTTGGTTTAGGGTATATGGA+GGG - chr3_4:197043-197062 None:intergenic 35.0%
! ATTTGGTTTAGGGTATATGG+AGG - chr3_4:197044-197063 None:intergenic 35.0%
AGTAAATGGGTCAGATATTC+CGG - chr3_4:197079-197098 None:intergenic 35.0%
!! TGAAATGGCTCAGCTATTTT+GGG - chr3_4:197114-197133 None:intergenic 35.0%
! TTGAAATGGCTCAGCTATTT+TGG - chr3_4:197115-197134 None:intergenic 35.0%
ATCTGTGTGAAAAACCAAAC+TGG + chr3_4:197247-197266 Msa0483410:intron 35.0%
CGTGCTCTAATATTTGATCA+AGG + chr3_4:197383-197402 Msa0483410:CDS 35.0%
ATCAAGGAGACAGAATATCT+CGG + chr3_4:197399-197418 Msa0483410:CDS 35.0%
TCTATTCTTTACTGTCACTG+AGG + chr3_4:197432-197451 Msa0483410:intron 35.0%
TGTATGATAGCAAATGTTGG+GGG - chr3_4:197469-197488 None:intergenic 35.0%
GTGTATGATAGCAAATGTTG+GGG - chr3_4:197470-197489 None:intergenic 35.0%
CGTGTATGATAGCAAATGTT+GGG - chr3_4:197471-197490 None:intergenic 35.0%
ACGTGTATGATAGCAAATGT+TGG - chr3_4:197472-197491 None:intergenic 35.0%
TGTTTCTTGCAGTTGAATCA+TGG - chr3_4:197662-197681 None:intergenic 35.0%
TTTGATGTGAGTAAACTGCT+TGG + chr3_4:197687-197706 Msa0483410:intron 35.0%
TTCTACATAGCTGCATCAAA+TGG + chr3_4:198029-198048 Msa0483410:intron 35.0%
TTTCTTCCAGTTGTTGAAGT+AGG + chr3_4:198351-198370 Msa0483410:intron 35.0%
ATGTTTCCTACTTCAACAAC+TGG - chr3_4:198360-198379 None:intergenic 35.0%
TTGACTACGTCAATCTCTTT+AGG + chr3_4:198379-198398 Msa0483410:intron 35.0%
!! TCAATCTCTTTAGGACTGAT+CGG + chr3_4:198388-198407 Msa0483410:intron 35.0%
GTGCAGTCAATAATACTCTA+TGG + chr3_4:198418-198437 Msa0483410:intron 35.0%
ATATGTATCATCCCTTGGTT+GGG - chr3_4:198447-198466 None:intergenic 35.0%
TATATGTATCATCCCTTGGT+TGG - chr3_4:198448-198467 None:intergenic 35.0%
TAAGAGGGATAAATGGATCA+TGG - chr3_4:198487-198506 None:intergenic 35.0%
TTGTGTATACTACTGTCACT+TGG + chr3_4:198563-198582 Msa0483410:intron 35.0%
! CTCATTTACAGGTCTTTTCA+AGG + chr3_4:198667-198686 Msa0483410:intron 35.0%
!! TTTACAGGTCTTTTCAAGGA+TGG + chr3_4:198671-198690 Msa0483410:intron 35.0%
AGATATTACAGGGGACTAAT+TGG + chr3_4:198771-198790 Msa0483410:three_prime_UTR 35.0%
AACACTCCCTATTTAGTACG+TGG + chr3_4:192544-192563 Msa0483410:five_prime_UTR 40.0%
GTGCTTCCACGTACTAAATA+GGG - chr3_4:192553-192572 None:intergenic 40.0%
CTATTTAGTACGTGGAAGCA+CGG + chr3_4:192552-192571 Msa0483410:five_prime_UTR 40.0%
! AATTGTTGTTGCTGAAGGTG+AGG - chr3_4:192789-192808 None:intergenic 40.0%
!! AGTAGTGTTGATTTGTGAGG+AGG - chr3_4:192873-192892 None:intergenic 40.0%
GAGGTTTGGAGAAAATTCTC+TGG + chr3_4:193103-193122 Msa0483410:CDS 40.0%
TTGGAGAAAATTCTCTGGAC+TGG + chr3_4:193108-193127 Msa0483410:CDS 40.0%
TGGAGAAAATTCTCTGGACT+GGG + chr3_4:193109-193128 Msa0483410:CDS 40.0%
! GACTATACGTACTGATGATG+TGG + chr3_4:193144-193163 Msa0483410:CDS 40.0%
! TATACGTACTGATGATGTGG+AGG + chr3_4:193147-193166 Msa0483410:CDS 40.0%
GGACAACAATTCGACCTATA+CGG - chr3_4:193267-193286 None:intergenic 40.0%
TTGGCTAAAAAACATGGGAC+TGG - chr3_4:193428-193447 None:intergenic 40.0%
! AATGAAGGCTTTGGTAAGGA+AGG + chr3_4:193666-193685 Msa0483410:intron 40.0%
ATCACTATCTCTACTGACCT+TGG - chr3_4:193718-193737 None:intergenic 40.0%
AGGTCAGTAGAGATAGTGAT+TGG + chr3_4:193718-193737 Msa0483410:CDS 40.0%
GGTCAGTAGAGATAGTGATT+GGG + chr3_4:193719-193738 Msa0483410:CDS 40.0%
GTCAGTAGAGATAGTGATTG+GGG + chr3_4:193720-193739 Msa0483410:CDS 40.0%
TATCACTGGTGATCTCTTCA+GGG + chr3_4:193822-193841 Msa0483410:CDS 40.0%
TGAATCTTCACTGGATGGAT+GGG + chr3_4:193963-193982 Msa0483410:CDS 40.0%
! CATCCCTCCATCATATTTTG+AGG - chr3_4:194025-194044 None:intergenic 40.0%
! CTCAAAATATGATGGAGGGA+TGG + chr3_4:194023-194042 Msa0483410:CDS 40.0%
!!! CTGCTGTTTTCTCAGGTATA+TGG + chr3_4:194076-194095 Msa0483410:intron 40.0%
! GTTTTCTCAGGTATATGGAG+AGG + chr3_4:194081-194100 Msa0483410:intron 40.0%
CATCTGTCATGATAGGTATG+AGG + chr3_4:194334-194353 Msa0483410:intron 40.0%
CCTGTCATGGTAATACAGAT+AGG - chr3_4:194606-194625 None:intergenic 40.0%
CCTATCTGTATTACCATGAC+AGG + chr3_4:194603-194622 Msa0483410:intron 40.0%
ACCGGACGAAATGATGAAAA+TGG - chr3_4:194640-194659 None:intergenic 40.0%
TTGGACATTACCTGTCTTCT+AGG - chr3_4:194724-194743 None:intergenic 40.0%
TCAGAGACAAGACAAATGCA+AGG - chr3_4:194797-194816 None:intergenic 40.0%
TCGAGGTTCAAATGTTCAAC+CGG - chr3_4:194936-194955 None:intergenic 40.0%
GGCTCCATTAGTTCAATAAC+TGG + chr3_4:194962-194981 Msa0483410:intron 40.0%
GCTTTCCGAACCTTTGTAAT+AGG + chr3_4:194989-195008 Msa0483410:intron 40.0%
ACTATGAGGCCCTATTACAA+AGG - chr3_4:195002-195021 None:intergenic 40.0%
GAAAAATAAAAGGGGGGAAG+GGG - chr3_4:195117-195136 None:intergenic 40.0%
GGAAAAATAAAAGGGGGGAA+GGG - chr3_4:195118-195137 None:intergenic 40.0%
AGGAAAAATAAAAGGGGGGA+AGG - chr3_4:195119-195138 None:intergenic 40.0%
! AAGAATAGACGGGGTTAGTA+AGG - chr3_4:195218-195237 None:intergenic 40.0%
! TTTGTGGTGGGAAGAATAGA+CGG - chr3_4:195229-195248 None:intergenic 40.0%
CTATTGCTTGGTTTCTAAGC+AGG - chr3_4:195282-195301 None:intergenic 40.0%
TCTGCGCAGAAAAAAAAGAG+GGG - chr3_4:195385-195404 None:intergenic 40.0%
GTCTGCGCAGAAAAAAAAGA+GGG - chr3_4:195386-195405 None:intergenic 40.0%
AGTCTGCGCAGAAAAAAAAG+AGG - chr3_4:195387-195406 None:intergenic 40.0%
AGTAAATGCGTCAAAGAACC+AGG + chr3_4:195492-195511 Msa0483410:CDS 40.0%
TATGAAAACACCTACAGGCA+AGG - chr3_4:195557-195576 None:intergenic 40.0%
CAACAAGGCAACTATAGTGT+GGG + chr3_4:195799-195818 Msa0483410:intron 40.0%
TTGTCCAATTGCTGACAACT+TGG + chr3_4:196144-196163 Msa0483410:intron 40.0%
TTGTCCAAGTTGTCAGCAAT+TGG - chr3_4:196151-196170 None:intergenic 40.0%
TTAGTTTCATGTTCTGGCCT+TGG + chr3_4:196547-196566 Msa0483410:CDS 40.0%
AGCAAGTTCTTAAAGCCAAG+AGG + chr3_4:196590-196609 Msa0483410:CDS 40.0%
GCAAGTTCTTAAAGCCAAGA+GGG + chr3_4:196591-196610 Msa0483410:CDS 40.0%
AACAAATGAACCTACCCTCT+TGG - chr3_4:196608-196627 None:intergenic 40.0%
GAAGATTCCTTGAGAAGATC+TGG + chr3_4:196727-196746 Msa0483410:CDS 40.0%
TGGATACACAATAGTTCGTC+CGG + chr3_4:196753-196772 Msa0483410:CDS 40.0%
! CAGTTTCTTTTGTAGTGTGC+CGG + chr3_4:196790-196809 Msa0483410:intron 40.0%
GGATTTAGAGGGAAAGAAGA+TGG - chr3_4:196942-196961 None:intergenic 40.0%
GGATTTAGAGGGAAAGAAGA+TGG - chr3_4:196942-196961 None:intergenic 40.0%
! TTGGTTTAGGGTATATGGAG+GGG - chr3_4:197042-197061 None:intergenic 40.0%
GTAAATGGGTCAGATATTCC+GGG - chr3_4:197078-197097 None:intergenic 40.0%
! GACTTGAATGTTTTGCTGAC+AGG + chr3_4:197343-197362 Msa0483410:intron 40.0%
TCAAGGAGACAGAATATCTC+GGG + chr3_4:197400-197419 Msa0483410:CDS 40.0%
TAGCAAATGTTGGGGGAAAT+AGG - chr3_4:197462-197481 None:intergenic 40.0%
GAGTGCCTTCACACATATAT+CGG - chr3_4:197640-197659 None:intergenic 40.0%
ACTCGTAACATACCTAGACA+AGG - chr3_4:197763-197782 None:intergenic 40.0%
GAACATACCTCCTACAAGTA+AGG + chr3_4:197986-198005 Msa0483410:intron 40.0%
TTTGACGGAACCTTACTTGT+AGG - chr3_4:197999-198018 None:intergenic 40.0%
GATCCATTTATCCCTCTTAG+AGG + chr3_4:198488-198507 Msa0483410:intron 40.0%
CGTGCTTCCACGTACTAAAT+AGG - chr3_4:192554-192573 None:intergenic 45.0%
GACTGACAACTGACAGGAAT+CGG - chr3_4:192634-192653 None:intergenic 45.0%
GAATTGGACTGACAACTGAC+AGG - chr3_4:192640-192659 None:intergenic 45.0%
GTTGACACAAGTCCTCCAAT+TGG + chr3_4:192669-192688 Msa0483410:five_prime_UTR 45.0%
! GCAGCAATTGTTGTTGCTGA+AGG - chr3_4:192794-192813 None:intergenic 45.0%
!!! GCTGCTTTTTGGTGTATGAG+AGG - chr3_4:192898-192917 None:intergenic 45.0%
!! GTTGTTGTCGTCGTCGTTTT+GGG - chr3_4:193002-193021 None:intergenic 45.0%
GGCAGATATTCGATGAGGTT+TGG + chr3_4:193089-193108 Msa0483410:CDS 45.0%
GATGCTCTTCTTGTTCGTGA+AGG + chr3_4:193175-193194 Msa0483410:CDS 45.0%
CAGTAGTATTCTGAGCACCA+GGG - chr3_4:193222-193241 None:intergenic 45.0%
ACAGTAGTATTCTGAGCACC+AGG - chr3_4:193223-193242 None:intergenic 45.0%
TTGTCCGTAAACTCATGCTC+AGG + chr3_4:193281-193300 Msa0483410:CDS 45.0%
TGTCCGTAAACTCATGCTCA+GGG + chr3_4:193282-193301 Msa0483410:CDS 45.0%
AACCCCTGAGCATGAGTTTA+CGG - chr3_4:193288-193307 None:intergenic 45.0%
! CTGCAATGAAGGCTTTGGTA+AGG + chr3_4:193662-193681 Msa0483410:intron 45.0%
GAGATAGTGATTGGGGATGT+TGG + chr3_4:193727-193746 Msa0483410:CDS 45.0%
TGGTGATCCAAACACAGTCA+AGG + chr3_4:193747-193766 Msa0483410:CDS 45.0%
ATCACCAGTGATAGTTGAGC+GGG - chr3_4:193815-193834 None:intergenic 45.0%
GATCACCAGTGATAGTTGAG+CGG - chr3_4:193816-193835 None:intergenic 45.0%
CTATCACTGGTGATCTCTTC+AGG + chr3_4:193821-193840 Msa0483410:CDS 45.0%
CTGAATCTTCACTGGATGGA+TGG + chr3_4:193962-193981 Msa0483410:CDS 45.0%
!!! AATGGAGCTGCTGTTTTCTC+AGG + chr3_4:194069-194088 Msa0483410:CDS 45.0%
GGGTATGTCTTCAATAGAGG+TGG + chr3_4:194188-194207 Msa0483410:intron 45.0%
!! CTGTCAAGAGTACTACCCAA+AGG - chr3_4:194245-194264 None:intergenic 45.0%
CTTTGGGTAGTACTCTTGAC+AGG + chr3_4:194243-194262 Msa0483410:CDS 45.0%
TCATGATAGGTATGAGGGCT+TGG + chr3_4:194340-194359 Msa0483410:intron 45.0%
! ATTCTAGAAGCTGGTCCTTC+AGG + chr3_4:194401-194420 Msa0483410:CDS 45.0%
! TTCTAGAAGCTGGTCCTTCA+GGG + chr3_4:194402-194421 Msa0483410:CDS 45.0%
! ACTGGATGATCTGGTTTCAC+CGG - chr3_4:194658-194677 None:intergenic 45.0%
! GGGTCTAAAACTGGATGATC+TGG - chr3_4:194667-194686 None:intergenic 45.0%
TTCAACTGCGATCTTACCAG+TGG - chr3_4:194911-194930 None:intergenic 45.0%
GTAAGATCGCAGTTGAACTC+CGG + chr3_4:194914-194933 Msa0483410:intron 45.0%
GGTTGAACATTTGAACCTCG+AGG + chr3_4:194935-194954 Msa0483410:intron 45.0%
GAGGCCCTATTACAAAGGTT+CGG - chr3_4:194997-195016 None:intergenic 45.0%
TGTTACTAGACAGAGGAGCA+AGG - chr3_4:195072-195091 None:intergenic 45.0%
TATCACTTAGAGTCCTCCAG+TGG + chr3_4:195145-195164 Msa0483410:intron 45.0%
! TAATGGACGTAATGGTCCAC+TGG - chr3_4:195164-195183 None:intergenic 45.0%
! TTGTGGTGGGAAGAATAGAC+GGG - chr3_4:195228-195247 None:intergenic 45.0%
CTAAGCAGGAGCAGTTAGAA+TGG - chr3_4:195268-195287 None:intergenic 45.0%
TGCGCAGAAAAAAAAGAGGG+GGG - chr3_4:195383-195402 None:intergenic 45.0%
CTGCGCAGAAAAAAAAGAGG+GGG - chr3_4:195384-195403 None:intergenic 45.0%
CCACACTATAGTTGCCTTGT+TGG - chr3_4:195801-195820 None:intergenic 45.0%
CCAACAAGGCAACTATAGTG+TGG + chr3_4:195798-195817 Msa0483410:intron 45.0%
AGAATGCATAACTAGGCACC+TGG + chr3_4:196418-196437 Msa0483410:intron 45.0%
GTTCTTAAAGCCAAGAGGGT+AGG + chr3_4:196595-196614 Msa0483410:intron 45.0%
ACCTTAATCCCGAATTCTCC+AGG + chr3_4:196699-196718 Msa0483410:intron 45.0%
GGATACACAATAGTTCGTCC+GGG + chr3_4:196754-196773 Msa0483410:CDS 45.0%
! GATGGGTGAGTGGATTTAGA+GGG - chr3_4:196953-196972 None:intergenic 45.0%
! AGATGGGTGAGTGGATTTAG+AGG - chr3_4:196954-196973 None:intergenic 45.0%
TGCTCCCCTCTAATATTGAG+TGG - chr3_4:196992-197011 None:intergenic 45.0%
! TTTAGGGTATATGGAGGGGA+AGG - chr3_4:197038-197057 None:intergenic 45.0%
!! CGGAGGGAGTATTTGGTTTA+GGG - chr3_4:197054-197073 None:intergenic 45.0%
!! ACGGAGGGAGTATTTGGTTT+AGG - chr3_4:197055-197074 None:intergenic 45.0%
! CCAAACTGGCTCAGATATAC+CGG + chr3_4:197261-197280 Msa0483410:intron 45.0%
! CAAACTGGCTCAGATATACC+GGG + chr3_4:197262-197281 Msa0483410:intron 45.0%
! TTTTGCTGACAGGAAGAACC+TGG + chr3_4:197353-197372 Msa0483410:intron 45.0%
TGTGGCCGATATATGTGTGA+AGG + chr3_4:197632-197651 Msa0483410:CDS 45.0%
ATGTTACGAGTACGTTGCTG+AGG + chr3_4:197772-197791 Msa0483410:CDS 45.0%
! TGGGAATGAGCTTTATGAGC+TGG + chr3_4:197796-197815 Msa0483410:CDS 45.0%
ATTTGCTTTGTCCGGCAAGT+GGG - chr3_4:197905-197924 None:intergenic 45.0%
TATTTGCTTTGTCCGGCAAG+TGG - chr3_4:197906-197925 None:intergenic 45.0%
GAAGAATACCTGAACATCCC+TGG + chr3_4:197957-197976 Msa0483410:exon 45.0%
! TTGTAGGAGGTATGTTCTCC+AGG - chr3_4:197983-198002 None:intergenic 45.0%
!! ATACCTTTGGAGTTGCATGC+TGG + chr3_4:198261-198280 Msa0483410:intron 45.0%
ATTCCAGCATGCAACTCCAA+AGG - chr3_4:198267-198286 None:intergenic 45.0%
TGGAATCACTCTTCTTGAGC+CGG + chr3_4:198281-198300 Msa0483410:intron 45.0%
! CCACCTCTAAGAGGGATAAA+TGG - chr3_4:198494-198513 None:intergenic 45.0%
CCATTTATCCCTCTTAGAGG+TGG + chr3_4:198491-198510 Msa0483410:intron 45.0%
! TAGACAGACCACCTCTAAGA+GGG - chr3_4:198502-198521 None:intergenic 45.0%
ATAGACAGACCACCTCTAAG+AGG - chr3_4:198503-198522 None:intergenic 45.0%
!! AAATTAAAAATAAAATATAG+GGG - chr3_4:194166-194185 None:intergenic 5.0%
GACAACTGACAGGAATCGGA+TGG - chr3_4:192630-192649 None:intergenic 50.0%
GATCGCTCGCAATTGCCAAT+TGG - chr3_4:192687-192706 None:intergenic 50.0%
TCTTTGCCATCCCTGGTGTT+TGG - chr3_4:192965-192984 None:intergenic 50.0%
! CGTTGTTGTCGTCGTCGTTT+TGG - chr3_4:193003-193022 None:intergenic 50.0%
ATCTTCGACCAAGTCCCACA+GGG - chr3_4:193066-193085 None:intergenic 50.0%
ATCGCGGCAGATATTCGATG+AGG + chr3_4:193084-193103 Msa0483410:CDS 50.0%
GGGATGGCAAACTCACACAT+AGG - chr3_4:193202-193221 None:intergenic 50.0%
ATGTGTGAGTTTGCCATCCC+TGG + chr3_4:193202-193221 Msa0483410:CDS 50.0%
AGTATTCTGAGCACCAGGGA+TGG - chr3_4:193218-193237 None:intergenic 50.0%
!! GTTGGTGCTACTAGCCGTAT+AGG + chr3_4:193250-193269 Msa0483410:CDS 50.0%
GTCCGTAAACTCATGCTCAG+GGG + chr3_4:193283-193302 Msa0483410:CDS 50.0%
GGTAAGGAAGGCAGATGAAG+AGG + chr3_4:193678-193697 Msa0483410:CDS 50.0%
AAGGAAGGCAGATGAAGAGG+TGG + chr3_4:193681-193700 Msa0483410:CDS 50.0%
ACAGCAGCCTTGACTGTGTT+TGG - chr3_4:193757-193776 None:intergenic 50.0%
ACAGTCAAGGCTGCTGTAGA+AGG + chr3_4:193760-193779 Msa0483410:CDS 50.0%
! CTCTTCAGGGTTGATCAGCA+AGG + chr3_4:193835-193854 Msa0483410:CDS 50.0%
GATGGATGGGAAGTTCGTCA+AGG + chr3_4:193976-193995 Msa0483410:CDS 50.0%
TCTAGAAGCTGGTCCTTCAG+GGG + chr3_4:194403-194422 Msa0483410:CDS 50.0%
GGTCTCACTCTAACCTGTCA+TGG - chr3_4:194619-194638 None:intergenic 50.0%
ACGGTTTGAGCCTAGAAGAC+AGG + chr3_4:194711-194730 Msa0483410:CDS 50.0%
ACATTTGAACCTCGAGGCAG+TGG + chr3_4:194941-194960 Msa0483410:intron 50.0%
GACAGAGGAGCAAGGAATCA+GGG - chr3_4:195064-195083 None:intergenic 50.0%
AGACAGAGGAGCAAGGAATC+AGG - chr3_4:195065-195084 None:intergenic 50.0%
! TGTGGTGGGAAGAATAGACG+GGG - chr3_4:195227-195246 None:intergenic 50.0%
AGAAAAAAAAGAGGGGGGGG+GGG - chr3_4:195378-195397 None:intergenic 50.0%
CAGAAAAAAAAGAGGGGGGG+GGG - chr3_4:195379-195398 None:intergenic 50.0%
GCAGAAAAAAAAGAGGGGGG+GGG - chr3_4:195380-195399 None:intergenic 50.0%
CGCAGAAAAAAAAGAGGGGG+GGG - chr3_4:195381-195400 None:intergenic 50.0%
GCGCAGAAAAAAAAGAGGGG+GGG - chr3_4:195382-195401 None:intergenic 50.0%
GCTGAAAGCTTCTCGAATCC+TGG - chr3_4:195513-195532 None:intergenic 50.0%
! TTGGTATTGAGCCTTCCAGG+CGG + chr3_4:196566-196585 Msa0483410:CDS 50.0%
! TTTAAGAACTTGCTCCCGCC+TGG - chr3_4:196584-196603 None:intergenic 50.0%
GCCTGGAGAATTCGGGATTA+AGG - chr3_4:196703-196722 None:intergenic 50.0%
TAATCCCGAATTCTCCAGGC+AGG + chr3_4:196703-196722 Msa0483410:intron 50.0%
TTCACCTGCCTGGAGAATTC+GGG - chr3_4:196710-196729 None:intergenic 50.0%
CTTCACCTGCCTGGAGAATT+CGG - chr3_4:196711-196730 None:intergenic 50.0%
TCAAGGAATCTTCACCTGCC+TGG - chr3_4:196720-196739 None:intergenic 50.0%
TCCTTGAGAAGATCTGGGCT+TGG + chr3_4:196733-196752 Msa0483410:CDS 50.0%
TCCAAGCCCAGATCTTCTCA+AGG - chr3_4:196737-196756 None:intergenic 50.0%
AACTGTACCTGCAATGGACC+CGG - chr3_4:196775-196794 None:intergenic 50.0%
AGGGAAAGAAGATGGGTGAG+TGG - chr3_4:196963-196982 None:intergenic 50.0%
ATGGGTCAGATATTCCGGGA+CGG - chr3_4:197074-197093 None:intergenic 50.0%
CCGGTATATCTGAGCCAGTT+TGG - chr3_4:197264-197283 None:intergenic 50.0%
TACGAGTACGTTGCTGAGGA+TGG + chr3_4:197776-197795 Msa0483410:CDS 50.0%
ACGAGTACGTTGCTGAGGAT+GGG + chr3_4:197777-197796 Msa0483410:CDS 50.0%
! TAATCAGGTTGCCCACTTGC+CGG + chr3_4:197891-197910 Msa0483410:intron 50.0%
TTCTCCAAGACAGAGAGAGC+TGG - chr3_4:197940-197959 None:intergenic 50.0%
GACGGAACCTTACTTGTAGG+AGG - chr3_4:197996-198015 None:intergenic 50.0%
ATCACTCTTCTTGAGCCGGA+AGG + chr3_4:198285-198304 Msa0483410:intron 50.0%
TCTTCTTGAGCCGGAAGGAT+AGG + chr3_4:198290-198309 Msa0483410:intron 50.0%
CTTCTTGAGCCGGAAGGATA+GGG + chr3_4:198291-198310 Msa0483410:intron 50.0%
TTCTTGAGCCGGAAGGATAG+GGG + chr3_4:198292-198311 Msa0483410:intron 50.0%
TCTACCATCCCCTATCCTTC+CGG - chr3_4:198303-198322 None:intergenic 50.0%
ACTCTATGGAGACCCAACCA+AGG + chr3_4:198432-198451 Msa0483410:intron 50.0%
CTCTATGGAGACCCAACCAA+GGG + chr3_4:198433-198452 Msa0483410:intron 50.0%
CGCTCGCAATTGCCAATTGG+AGG - chr3_4:192684-192703 None:intergenic 55.0%
!!! GGAGCGGGTATGCTGCTTTT+TGG - chr3_4:192909-192928 None:intergenic 55.0%
CAGTCGTTGTACAGAGGAGC+GGG - chr3_4:192924-192943 None:intergenic 55.0%
GCAGTCGTTGTACAGAGGAG+CGG - chr3_4:192925-192944 None:intergenic 55.0%
AGGAGGCAGTCGTTGTACAG+AGG - chr3_4:192930-192949 None:intergenic 55.0%
! TTTGGAGCAGCGGCTATAGG+AGG - chr3_4:192947-192966 None:intergenic 55.0%
! GTGTTTGGAGCAGCGGCTAT+AGG - chr3_4:192950-192969 None:intergenic 55.0%
! ATCCCTGGTGTTTGGAGCAG+CGG - chr3_4:192957-192976 None:intergenic 55.0%
! CTTGCTGTCTTTGCCATCCC+TGG - chr3_4:192972-192991 None:intergenic 55.0%
GATCTTCGACCAAGTCCCAC+AGG - chr3_4:193067-193086 None:intergenic 55.0%
! TGGGACTTGGTCGAAGATCG+CGG + chr3_4:193068-193087 Msa0483410:CDS 55.0%
! CTGGACTGGGTCAGATCTCT+AGG + chr3_4:193122-193141 Msa0483410:CDS 55.0%
GCTCAGGGGTTACTCTGTCA+AGG + chr3_4:193297-193316 Msa0483410:CDS 55.0%
AGGTGGTAGAGCTGCTTCCA+AGG + chr3_4:193698-193717 Msa0483410:CDS 55.0%
AGTGATAGTTGAGCGGGCAG+TGG - chr3_4:193809-193828 None:intergenic 55.0%
ACTGCCCGCTCAACTATCAC+TGG + chr3_4:193808-193827 Msa0483410:CDS 55.0%
! AATTGGCTCAGTTGCGCGCT+GGG + chr3_4:193899-193918 Msa0483410:CDS 55.0%
! GAGGGCTTGGTTCTCTCTGT+TGG + chr3_4:194353-194372 Msa0483410:CDS 55.0%
! GGCTTGGTTCTCTCTGTTGG+CGG + chr3_4:194356-194375 Msa0483410:CDS 55.0%
GTTCTCTCTGTTGGCGGCAA+TGG + chr3_4:194362-194381 Msa0483410:CDS 55.0%
!! CTCTGACTTGGATCCCCTGA+AGG - chr3_4:194419-194438 None:intergenic 55.0%
!! GGGGGGAAGGGGTATTATGT+AGG - chr3_4:195106-195125 None:intergenic 55.0%
TGGACGTAATGGTCCACTGG+AGG - chr3_4:195161-195180 None:intergenic 55.0%
AAAAAAAAGAGGGGGGGGGG+GGG - chr3_4:195376-195395 None:intergenic 55.0%
GAAAAAAAAGAGGGGGGGGG+GGG - chr3_4:195377-195396 None:intergenic 55.0%
! GCCTTGGTATTGAGCCTTCC+AGG + chr3_4:196563-196582 Msa0483410:CDS 55.0%
GCCTGGAAGGCTCAATACCA+AGG - chr3_4:196567-196586 None:intergenic 55.0%
! TGGTATTGAGCCTTCCAGGC+GGG + chr3_4:196567-196586 Msa0483410:CDS 55.0%
GGGTATATGGAGGGGAAGGA+AGG - chr3_4:197034-197053 None:intergenic 55.0%
ACCAAATACTCCCTCCGTCC+CGG + chr3_4:197057-197076 Msa0483410:intron 55.0%
GTCAGATATTCCGGGACGGA+GGG - chr3_4:197070-197089 None:intergenic 55.0%
CTGGCTCAGATATACCGGGA+CGG + chr3_4:197266-197285 Msa0483410:intron 55.0%
CTCAGATATACCGGGACGGA+GGG + chr3_4:197270-197289 Msa0483410:intron 55.0%
ACATAGTACTCCCTCCGTCC+CGG - chr3_4:197283-197302 None:intergenic 55.0%
TGCTGACAGGAAGAACCTGG+TGG + chr3_4:197356-197375 Msa0483410:intron 55.0%
GCTGACAGGAAGAACCTGGT+GGG + chr3_4:197357-197376 Msa0483410:intron 55.0%
! GGGCATCAGTTGTGCTGATG+TGG + chr3_4:197614-197633 Msa0483410:intron 55.0%
GACACCAGCTCTCTCTGTCT+TGG + chr3_4:197933-197952 Msa0483410:CDS 55.0%
ATACCTGAACATCCCTGGCC+TGG + chr3_4:197962-197981 Msa0483410:exon 55.0%
GAGGTATGTTCTCCAGGCCA+GGG - chr3_4:197977-197996 None:intergenic 55.0%
TAGCCGCTGCTCCAAACACC+AGG + chr3_4:192951-192970 Msa0483410:CDS 60.0%
AGCCGCTGCTCCAAACACCA+GGG + chr3_4:192952-192971 Msa0483410:CDS 60.0%
GCTGCTCCAAACACCAGGGA+TGG + chr3_4:192956-192975 Msa0483410:CDS 60.0%
TCTCGACGACGTCAACCCTG+TGG + chr3_4:193048-193067 Msa0483410:CDS 60.0%
CTCGACGACGTCAACCCTGT+GGG + chr3_4:193049-193068 Msa0483410:CDS 60.0%
GACGTCAACCCTGTGGGACT+TGG + chr3_4:193055-193074 Msa0483410:CDS 60.0%
! CAATTGGCTCAGTTGCGCGC+TGG + chr3_4:193898-193917 Msa0483410:CDS 60.0%
CTAATGGAGCCACTGCCTCG+AGG - chr3_4:194953-194972 None:intergenic 60.0%
AAAAAAAGAGGGGGGGGGGG+GGG - chr3_4:195375-195394 None:intergenic 60.0%
! AGAACTTGCTCCCGCCTGGA+AGG - chr3_4:196580-196599 None:intergenic 60.0%
AGTTCGTCCGGGTCCATTGC+AGG + chr3_4:196765-196784 Msa0483410:CDS 60.0%
!! TCCGGGACGGAGGGAGTATT+TGG - chr3_4:197061-197080 None:intergenic 60.0%
GGTCAGATATTCCGGGACGG+AGG - chr3_4:197071-197090 None:intergenic 60.0%
GCTCAGATATACCGGGACGG+AGG + chr3_4:197269-197288 Msa0483410:intron 60.0%
ATTAGAGCACGCTGCCCACC+AGG - chr3_4:197374-197393 None:intergenic 60.0%
TCTCCAGGCCAGGGATGTTC+AGG - chr3_4:197968-197987 None:intergenic 60.0%
! GGAGGTATGTTCTCCAGGCC+AGG - chr3_4:197978-197997 None:intergenic 60.0%
TGAGCCGGAAGGATAGGGGA+TGG + chr3_4:198296-198315 Msa0483410:intron 60.0%
AAAAAAGAGGGGGGGGGGGG+GGG - chr3_4:195374-195393 None:intergenic 65.0%
AAAAAGAGGGGGGGGGGGGG+GGG - chr3_4:195373-195392 None:intergenic 70.0%
AAAAGAGGGGGGGGGGGGGG+GGG - chr3_4:195372-195391 None:intergenic 75.0%
! AAAGAGGGGGGGGGGGGGGG+GGG - chr3_4:195371-195390 None:intergenic 80.0%
! AAGAGGGGGGGGGGGGGGGG+GGG - chr3_4:195370-195389 None:intergenic 85.0%
! AGAGGGGGGGGGGGGGGGGG+GGG - chr3_4:195369-195388 None:intergenic 90.0%
! AGGGGGGGGGGGGGGGGGGG+GGG - chr3_4:195367-195386 None:intergenic 95.0%
! GAGGGGGGGGGGGGGGGGGG+GGG - chr3_4:195368-195387 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 192519 198875 192519 ID=Msa0483410;Name=Msa0483410
chr3_4 mRNA 192519 198875 192519 ID=Msa0483410-mRNA-1;Parent=Msa0483410;Name=Msa0483410-mRNA-1;_AED=0.12;_eAED=0.12;_QI=260|1|1|1|0.91|0.84|13|231|589
chr3_4 exon 192519 193318 192519 ID=Msa0483410-mRNA-1:exon:25;Parent=Msa0483410-mRNA-1
chr3_4 exon 193673 194090 193673 ID=Msa0483410-mRNA-1:exon:26;Parent=Msa0483410-mRNA-1
chr3_4 exon 194189 194264 194189 ID=Msa0483410-mRNA-1:exon:27;Parent=Msa0483410-mRNA-1
chr3_4 exon 194349 194484 194349 ID=Msa0483410-mRNA-1:exon:28;Parent=Msa0483410-mRNA-1
chr3_4 exon 194625 194732 194625 ID=Msa0483410-mRNA-1:exon:29;Parent=Msa0483410-mRNA-1
chr3_4 exon 195481 195561 195481 ID=Msa0483410-mRNA-1:exon:30;Parent=Msa0483410-mRNA-1
chr3_4 exon 196523 196612 196523 ID=Msa0483410-mRNA-1:exon:31;Parent=Msa0483410-mRNA-1
chr3_4 exon 196721 196786 196721 ID=Msa0483410-mRNA-1:exon:32;Parent=Msa0483410-mRNA-1
chr3_4 exon 197365 197421 197365 ID=Msa0483410-mRNA-1:exon:33;Parent=Msa0483410-mRNA-1
chr3_4 exon 197615 197692 197615 ID=Msa0483410-mRNA-1:exon:34;Parent=Msa0483410-mRNA-1
chr3_4 exon 197770 197817 197770 ID=Msa0483410-mRNA-1:exon:35;Parent=Msa0483410-mRNA-1
chr3_4 exon 197898 198002 197898 ID=Msa0483410-mRNA-1:exon:36;Parent=Msa0483410-mRNA-1
chr3_4 exon 198678 198875 198678 ID=Msa0483410-mRNA-1:exon:37;Parent=Msa0483410-mRNA-1
chr3_4 five_prime_UTR 192519 192778 192519 ID=Msa0483410-mRNA-1:five_prime_utr;Parent=Msa0483410-mRNA-1
chr3_4 CDS 192779 193318 192779 ID=Msa0483410-mRNA-1:cds;Parent=Msa0483410-mRNA-1
chr3_4 CDS 193673 194090 193673 ID=Msa0483410-mRNA-1:cds;Parent=Msa0483410-mRNA-1
chr3_4 CDS 194189 194264 194189 ID=Msa0483410-mRNA-1:cds;Parent=Msa0483410-mRNA-1
chr3_4 CDS 194349 194484 194349 ID=Msa0483410-mRNA-1:cds;Parent=Msa0483410-mRNA-1
chr3_4 CDS 194625 194732 194625 ID=Msa0483410-mRNA-1:cds;Parent=Msa0483410-mRNA-1
chr3_4 CDS 195481 195561 195481 ID=Msa0483410-mRNA-1:cds;Parent=Msa0483410-mRNA-1
chr3_4 CDS 196523 196612 196523 ID=Msa0483410-mRNA-1:cds;Parent=Msa0483410-mRNA-1
chr3_4 CDS 196721 196786 196721 ID=Msa0483410-mRNA-1:cds;Parent=Msa0483410-mRNA-1
chr3_4 CDS 197365 197421 197365 ID=Msa0483410-mRNA-1:cds;Parent=Msa0483410-mRNA-1
chr3_4 CDS 197615 197692 197615 ID=Msa0483410-mRNA-1:cds;Parent=Msa0483410-mRNA-1
chr3_4 CDS 197770 197817 197770 ID=Msa0483410-mRNA-1:cds;Parent=Msa0483410-mRNA-1
chr3_4 CDS 197898 197969 197898 ID=Msa0483410-mRNA-1:cds;Parent=Msa0483410-mRNA-1
chr3_4 three_prime_UTR 197970 198002 197970 ID=Msa0483410-mRNA-1:three_prime_utr;Parent=Msa0483410-mRNA-1
chr3_4 three_prime_UTR 198678 198875 198678 ID=Msa0483410-mRNA-1:three_prime_utr;Parent=Msa0483410-mRNA-1
Gene Sequence

>Msa0483410

ATGAGTACCTCACCTTCAGCAACAACAATTGCTGCTGCTGCTGTGTACTCAAAGTATCATAATATTAATACAACACTTTCACTTTCAGGAGCCTCCTCACAAATCAACACTACTTTCCTCTCATACACCAAAAAGCAGCATACCCGCTCCTCTGTACAACGACTGCCTCCTATAGCCGCTGCTCCAAACACCAGGGATGGCAAAGACAGCAAGAACAACACCCAAAACGACGACGACAACAACGATGACAAACAATCTGTTTCTCTTAGTCTCGACGACGTCAACCCTGTGGGACTTGGTCGAAGATCGCGGCAGATATTCGATGAGGTTTGGAGAAAATTCTCTGGACTGGGTCAGATCTCTAGGACTATACGTACTGATGATGTGGAGGCACTAGATGCTCTTCTTGTTCGTGAAGGTCCTATGTGTGAGTTTGCCATCCCTGGTGCTCAGAATACTACTGTACTTGTTGTTGGTGCTACTAGCCGTATAGGTCGAATTGTTGTCCGTAAACTCATGCTCAGGGGTTACTCTGTCAAGGCTTTGGTAAGGAAGGCAGATGAAGAGGTGGTAGAGCTGCTTCCAAGGTCAGTAGAGATAGTGATTGGGGATGTTGGTGATCCAAACACAGTCAAGGCTGCTGTAGAAGGCTGCAATAAAATCATATATTGTGCCACTGCCCGCTCAACTATCACTGGTGATCTCTTCAGGGTTGATCAGCAAGGAGTTTATAATCTATCTAAAGCATTTCAGGATCACAACAATCAATTGGCTCAGTTGCGCGCTGGGAAAAGCAGCAAAAGTAAGCTTACAATTGCTAAATTTAAATCTGAATCTTCACTGGATGGATGGGAAGTTCGTCAAGGAACTTACTTCGAAGATGTAGTTACCTCAAAATATGATGGAGGGATGGATGCCAAATTTGAGTTCACTGAGAATGGAGCTGCTGTTTTCTCAGGGTATGTCTTCAATAGAGGTGGCTATGTAGAACTGTCAAAAAAGCTTTCTCTACCTTTGGGTAGTACTCTTGACAGGTATGAGGGCTTGGTTCTCTCTGTTGGCGGCAATGGAAGACCTTATGTATTAATTCTAGAAGCTGGTCCTTCAGGGGATCCAAGTCAGAGTAAATTGTATTTTGCAAGAATTAGTACAAAAGTGGGATTTTGTAGGGTTAGAGTGAGACCATTTTCATCATTTCGTCCGGTGAAACCAGATCATCCAGTTTTAGACCCTTTTCTTGTACATACATTAACAATACGGTTTGAGCCTAGAAGACAGAGGTCTGATATAGTAAATGCGTCAAAGAACCAGGATTCGAGAAGCTTTCAGCTAATATTGGAATATATAAAAGCCTTGCCTACTGGACAAGAAACCGATTTTGTCTTAGTTTCATGTTCTGGCCTTGGTATTGAGCCTTCCAGGCGGGAGCAAGTTCTTAAAGCCAAGAGGGCAGGTGAAGATTCCTTGAGAAGATCTGGGCTTGGATACACAATAGTTCGTCCGGGTCCATTGCAGGAAGAACCTGGTGGGCAGCGTGCTCTAATATTTGATCAAGGAGACAGAATATCTCGGGGCATCAGTTGTGCTGATGTGGCCGATATATGTGTGAAGGCACTCCATGATTCAACTGCAAGAAACAAAAGCTTTGATGTATGTTACGAGTACGTTGCTGAGGATGGGAATGAGCTTTATGAGCTGGTTGCCCACTTGCCGGACAAAGCAAATAACTATCTGACACCAGCTCTCTCTGTCTTGGAGAAGAATACCTGA
Protein sequence

>Msa0483410

MSTSPSATTIAAAAVYSKYHNINTTLSLSGASSQINTTFLSYTKKQHTRSSVQRLPPIAAAPNTRDGKDSKNNTQNDDDNNDDKQSVSLSLDDVNPVGLGRRSRQIFDEVWRKFSGLGQISRTIRTDDVEALDALLVREGPMCEFAIPGAQNTTVLVVGATSRIGRIVVRKLMLRGYSVKALVRKADEEVVELLPRSVEIVIGDVGDPNTVKAAVEGCNKIIYCATARSTITGDLFRVDQQGVYNLSKAFQDHNNQLAQLRAGKSSKSKLTIAKFKSESSLDGWEVRQGTYFEDVVTSKYDGGMDAKFEFTENGAAVFSGYVFNRGGYVELSKKLSLPLGSTLDRYEGLVLSVGGNGRPYVLILEAGPSGDPSQSKLYFARISTKVGFCRVRVRPFSSFRPVKPDHPVLDPFLVHTLTIRFEPRRQRSDIVNASKNQDSRSFQLILEYIKALPTGQETDFVLVSCSGLGIEPSRREQVLKAKRAGEDSLRRSGLGYTIVRPGPLQEEPGGQRALIFDQGDRISRGISCADVADICVKALHDSTARNKSFDVCYEYVAEDGNELYELVAHLPDKANNYLTPALSVLEKNT*