Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028510 | XP_003624076.4 | 99.352 | 617 | 4 | 0 | 1 | 617 | 1 | 617 | 0.0 | 1258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028510 | sp|O23702|CTBP_ARATH | 70.411 | 632 | 165 | 9 | 1 | 615 | 10 | 636 | 0.0 | 866 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028510 | G7L6N7 | 99.352 | 617 | 4 | 0 | 1 | 617 | 1 | 617 | 0.0 | 1258 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001960 | Msa1028510 | 0.819669 | 1.028662e-52 | -8.615850e-47 |
| Msa0002580 | Msa1028510 | 0.817247 | 3.641348e-52 | -8.615850e-47 |
| Msa0025720 | Msa1028510 | 0.812522 | 4.064239e-51 | -8.615850e-47 |
| Msa0094780 | Msa1028510 | 0.817238 | 3.658638e-52 | -8.615850e-47 |
| Msa0108410 | Msa1028510 | 0.807000 | 6.259114e-50 | -8.615850e-47 |
| Msa0658590 | Msa1028510 | 0.820012 | 8.589720e-53 | -8.615850e-47 |
| Msa0815970 | Msa1028510 | 0.802719 | 4.909508e-49 | -8.615850e-47 |
| Msa0833530 | Msa1028510 | 0.801641 | 8.181930e-49 | -8.615850e-47 |
| Msa0166000 | Msa1028510 | 0.815348 | 9.681164e-52 | -8.615850e-47 |
| Msa0182360 | Msa1028510 | 0.802739 | 4.862735e-49 | -8.615850e-47 |
| Msa0225860 | Msa1028510 | 0.818851 | 1.579800e-52 | -8.615850e-47 |
| Msa0428370 | Msa1028510 | 0.810331 | 1.215610e-50 | -8.615850e-47 |
| Msa0432090 | Msa1028510 | 0.821792 | 3.344019e-53 | -8.615850e-47 |
| Msa0436910 | Msa1028510 | 0.819584 | 1.075492e-52 | -8.615850e-47 |
| Msa0474730 | Msa1028510 | 0.822502 | 2.289084e-53 | -8.615850e-47 |
| Msa1026750 | Msa1028510 | 0.800964 | 1.125939e-48 | -8.615850e-47 |
| Msa1027990 | Msa1028510 | 0.824122 | 9.576236e-54 | -8.615850e-47 |
| Msa1028510 | Msa1066670 | 0.800303 | 1.535184e-48 | -8.615850e-47 |
| Msa1028510 | Msa1067560 | 0.971599 | 2.036158e-133 | -8.615850e-47 |
| Msa1028510 | Msa1111380 | 0.817503 | 3.188169e-52 | -8.615850e-47 |
| Msa1028510 | Msa1112880 | 0.946702 | 2.785990e-105 | -8.615850e-47 |
| Msa1028510 | Msa1132480 | 0.814735 | 1.323944e-51 | -8.615850e-47 |
| Msa1028510 | Msa1155170 | -0.804988 | 1.657930e-49 | -8.615850e-47 |
| Msa1028510 | Msa1155900 | 0.837947 | 3.847135e-57 | -8.615850e-47 |
| Msa1028510 | Msa1163100 | 0.813461 | 2.530167e-51 | -8.615850e-47 |
| Msa1028510 | Msa1192570 | 0.816089 | 6.618538e-52 | -8.615850e-47 |
| Msa1028510 | Msa1208950 | 0.826205 | 3.082664e-54 | -8.615850e-47 |
| Msa1028510 | Msa1225860 | -0.818376 | 2.024055e-52 | -8.615850e-47 |
| Msa1028510 | Msa1226470 | 0.801253 | 9.826779e-49 | -8.615850e-47 |
| Msa1028510 | Msa1265650 | 0.816809 | 4.565849e-52 | -8.615850e-47 |
| Msa1028510 | Msa1267040 | 0.804150 | 2.479743e-49 | -8.615850e-47 |
| Msa1028510 | Msa1267170 | 0.807631 | 4.598698e-50 | -8.615850e-47 |
| Msa1028510 | Msa1303070 | 0.818879 | 1.556734e-52 | -8.615850e-47 |
| Msa1028510 | Msa1303560 | 0.809323 | 2.002559e-50 | -8.615850e-47 |
| Msa1028510 | Msa1303650 | 0.807621 | 4.622185e-50 | -8.615850e-47 |
| Msa1028510 | Msa1320670 | 0.825611 | 4.265699e-54 | -8.615850e-47 |
| Msa1028510 | Msa1341840 | 0.802431 | 5.628405e-49 | -8.615850e-47 |
| Msa1028510 | Msa1403710 | 0.822606 | 2.165397e-53 | -8.615850e-47 |
| Msa1028510 | Msa1413620 | 0.802454 | 5.566525e-49 | -8.615850e-47 |
| Msa1028510 | Msa1441570 | 0.801738 | 7.813209e-49 | -8.615850e-47 |
| Msa0483100 | Msa1028510 | 0.829358 | 5.382874e-55 | -8.615850e-47 |
| Msa0519750 | Msa1028510 | 0.800365 | 1.491166e-48 | -8.615850e-47 |
| Msa0519830 | Msa1028510 | 0.807668 | 4.517126e-50 | -8.615850e-47 |
| Msa0520950 | Msa1028510 | 0.821355 | 4.219388e-53 | -8.615850e-47 |
| Msa0534720 | Msa1028510 | 0.813849 | 2.078602e-51 | -8.615850e-47 |
| Msa0583360 | Msa1028510 | -0.812152 | 4.895909e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028510 | MtrunA17_Chr7g0248631 | 99.352 | 617 | 4 | 0 | 1 | 617 | 1 | 617 | 0.0 | 1258 |
| Msa1028510 | MtrunA17_Chr4g0004681 | 24.786 | 234 | 162 | 4 | 88 | 320 | 81 | 301 | 2.34e-16 | 80.5 |
| Msa1028510 | MtrunA17_Chr4g0004721 | 24.359 | 234 | 166 | 4 | 88 | 320 | 82 | 305 | 1.84e-15 | 77.8 |
| Msa1028510 | MtrunA17_Chr8g0351111 | 25.328 | 229 | 156 | 4 | 97 | 321 | 98 | 315 | 4.95e-15 | 76.6 |
| Msa1028510 | MtrunA17_Chr4g0004711 | 23.932 | 234 | 167 | 3 | 88 | 320 | 81 | 304 | 7.81e-15 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028510 | AT1G01510.1 | 70.411 | 632 | 165 | 9 | 1 | 615 | 10 | 636 | 0.0 | 866 |
| Msa1028510 | AT1G12550.1 | 23.200 | 250 | 180 | 5 | 72 | 319 | 72 | 311 | 7.40e-13 | 70.5 |
| Msa1028510 | AT2G45630.2 | 26.009 | 223 | 158 | 3 | 97 | 319 | 113 | 328 | 1.94e-12 | 69.3 |
Find 152 sgRNAs with CRISPR-Local
Find 408 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACTTCACCTACTTTCTTT+TGG | 0.211979 | 7_1:-61473756 | None:intergenic |
| CCTTATCATCTTCAGAAATA+AGG | 0.241749 | 7_1:+61474227 | Msa1028510:CDS |
| CGGTGTCGTGGTCTTGTTCT+TGG | 0.271490 | 7_1:+61470440 | Msa1028510:CDS |
| CGTCATGCGCTTTCAGCTTC+CGG | 0.283600 | 7_1:+61470377 | Msa1028510:CDS |
| GTGCAACTACTAGGCTGTTT+TGG | 0.283782 | 7_1:+61475746 | Msa1028510:intron |
| GCAGTTTAGGGTTACGATTA+AGG | 0.290031 | 7_1:-61470024 | None:intergenic |
| GTCTCAAGGCAAAGAGTTAA+AGG | 0.302995 | 7_1:+61474144 | Msa1028510:CDS |
| AATGTTTGTTTGTAAAAGAT+TGG | 0.304024 | 7_1:+61475932 | Msa1028510:three_prime_UTR |
| CAGTCTCCATTCATCATCTA+TGG | 0.316039 | 7_1:-61474959 | None:intergenic |
| GCGCAGCAGGTCAAGTAAAA+AGG | 0.321847 | 7_1:+61473846 | Msa1028510:CDS |
| AACAATCTTCGATGCAGTTT+AGG | 0.339740 | 7_1:-61470037 | None:intergenic |
| GGTTTGTATTATAGTGATAA+AGG | 0.340576 | 7_1:+61475881 | Msa1028510:three_prime_UTR |
| TCATATATACATTGAGATAT+TGG | 0.348256 | 7_1:+61475770 | Msa1028510:CDS |
| ACAATCTTCGATGCAGTTTA+GGG | 0.355418 | 7_1:-61470036 | None:intergenic |
| AGCTTTGGCTACTCGTAGTT+TGG | 0.365421 | 7_1:+61470490 | Msa1028510:CDS |
| ATCTGCTTCTGCTAGAGCTT+TGG | 0.369504 | 7_1:+61470475 | Msa1028510:CDS |
| TTGCAGACATTCTTCATTGA+TGG | 0.369685 | 7_1:+61473583 | Msa1028510:CDS |
| CAGTTTAGGGTTACGATTAA+GGG | 0.371747 | 7_1:-61470023 | None:intergenic |
| ACACATCTGGCATGGAATCT+AGG | 0.373337 | 7_1:-61474179 | None:intergenic |
| CTTTCAGCTTCCGGTTGGCT+TGG | 0.378617 | 7_1:+61470386 | Msa1028510:CDS |
| AAGAGGTTTGGATGGAGATA+AGG | 0.382277 | 7_1:+61473542 | Msa1028510:CDS |
| TGCCGGTGGAAAATTATTAC+AGG | 0.387371 | 7_1:+61474394 | Msa1028510:CDS |
| CCTTATTTCTGAAGATGATA+AGG | 0.401198 | 7_1:-61474227 | None:intergenic |
| GGTGTCGTGGTCTTGTTCTT+GGG | 0.402883 | 7_1:+61470441 | Msa1028510:CDS |
| CAGATTACAGTGAAGAGGTT+TGG | 0.403780 | 7_1:+61473530 | Msa1028510:CDS |
| ACTGTGATGGCGTTGTTTCT+CGG | 0.410844 | 7_1:+61470326 | Msa1028510:CDS |
| GTGTTCGACGGCTGCGACGC+CGG | 0.411354 | 7_1:-61470081 | None:intergenic |
| TGTTTGTAAAAGATTGGAAT+TGG | 0.419376 | 7_1:+61475938 | Msa1028510:three_prime_UTR |
| CGTGGAAGTATCAACACATT+AGG | 0.425423 | 7_1:-61473502 | None:intergenic |
| AAGTCAAGCACAAGGCTTAG+TGG | 0.429257 | 7_1:+61474051 | Msa1028510:CDS |
| GGTCTTGTTCTTGGGATTGT+TGG | 0.429663 | 7_1:+61470449 | Msa1028510:CDS |
| GTTAGAGAGCAGTTAGATGA+TGG | 0.433483 | 7_1:+61473712 | Msa1028510:CDS |
| AGAGGTTTGGATGGAGATAA+GGG | 0.443417 | 7_1:+61473543 | Msa1028510:CDS |
| CAGAGCCAAGGCAGAGGATG+AGG | 0.446491 | 7_1:-61470214 | None:intergenic |
| TTGATTGATGGAACCATAGC+TGG | 0.450283 | 7_1:+61472358 | Msa1028510:CDS |
| TGTTGGAGTGAAGATGAAAT+TGG | 0.451467 | 7_1:+61476054 | Msa1028510:three_prime_UTR |
| AACCATAGCTGGATGTGCTT+TGG | 0.454009 | 7_1:+61472369 | Msa1028510:CDS |
| TCAAACTTGAAACCTGGTGC+TGG | 0.454656 | 7_1:-61473792 | None:intergenic |
| AAGGCAGAGGATGAGGTGAT+AGG | 0.456743 | 7_1:-61470207 | None:intergenic |
| GAGCACAATGGAGCGATATA+AGG | 0.456973 | 7_1:-61472113 | None:intergenic |
| GTGGAGGAGTACGGCGGCGG+CGG | 0.458059 | 7_1:-61470141 | None:intergenic |
| TCTCTATTTCGATGTTCATT+CGG | 0.458825 | 7_1:+61470529 | Msa1028510:CDS |
| CATTTGCTTCAGGACACAAT+TGG | 0.461515 | 7_1:+61474356 | Msa1028510:intron |
| TCTCTTCTTCTGCATCAGAC+AGG | 0.462877 | 7_1:-61473624 | None:intergenic |
| TTTGCAGATCAATAGAAGAA+TGG | 0.464658 | 7_1:+61474879 | Msa1028510:intron |
| GATCTGAAGGAAGGCGCAGC+AGG | 0.466849 | 7_1:+61473833 | Msa1028510:CDS |
| GGTTCTTGTATAGATTCTAC+TGG | 0.467231 | 7_1:-61474009 | None:intergenic |
| TGCAGACATTCTTCATTGAT+GGG | 0.472386 | 7_1:+61473584 | Msa1028510:CDS |
| TATCACCTCATCCTCTGCCT+TGG | 0.477997 | 7_1:+61470209 | Msa1028510:CDS |
| TGCAGAAGGGCCACAATGGA+TGG | 0.479858 | 7_1:+61472396 | Msa1028510:CDS |
| ACGGTGAGGCATTGCCGCAC+TGG | 0.487353 | 7_1:-61469976 | None:intergenic |
| TGTTTCTCGGTCTTCTTCGT+CGG | 0.489227 | 7_1:+61470339 | Msa1028510:CDS |
| GGCCTGCGATCTCTTGCTGC+CGG | 0.489266 | 7_1:+61474377 | Msa1028510:CDS |
| ATGATAAGGAACTGTGCAGC+AGG | 0.490535 | 7_1:-61474213 | None:intergenic |
| TTTGGGAAGAGCCTACAAAT+GGG | 0.491363 | 7_1:-61469865 | None:intergenic |
| TCACTGTAATCTGCACTTCG+TGG | 0.494076 | 7_1:-61473520 | None:intergenic |
| TGAAACCTGGTGCTGGGATG+AGG | 0.500943 | 7_1:-61473785 | None:intergenic |
| CAGTGATGAAGTTACAGTTA+TGG | 0.502032 | 7_1:-61469916 | None:intergenic |
| CTGAACAGAACCAAGCCAAC+CGG | 0.503533 | 7_1:-61470396 | None:intergenic |
| GTGGGAGGTAAGCGAGGGAG+TGG | 0.503852 | 7_1:-61470160 | None:intergenic |
| TGTGCTTTGGACGGTGCAGA+AGG | 0.505335 | 7_1:+61472382 | Msa1028510:CDS |
| ATGGCGGCGTAGCGTTGTTA+CGG | 0.505962 | 7_1:-61469995 | None:intergenic |
| CTCGAACTCGATTCTCTCTC+CGG | 0.507271 | 7_1:+61470062 | Msa1028510:CDS |
| TTTAGAGCTTGAGTGGCAAT+CGG | 0.508134 | 7_1:-61474030 | None:intergenic |
| CACGACACCGTCGCATCCCT+CGG | 0.510444 | 7_1:-61470427 | None:intergenic |
| TTACAGTGAAGAGGTTTGGA+TGG | 0.521911 | 7_1:+61473534 | Msa1028510:CDS |
| GGTCAGCAGAGCCAAGGCAG+AGG | 0.522498 | 7_1:-61470220 | None:intergenic |
| GGCCACAATGGATGGAAGCA+TGG | 0.523010 | 7_1:+61472404 | Msa1028510:CDS |
| CAATATGACAATAAAATACA+AGG | 0.523472 | 7_1:-61476084 | None:intergenic |
| AAGGTTCCATAGATGATGAA+TGG | 0.524133 | 7_1:+61474953 | Msa1028510:CDS |
| GGAGGTAAGCGAGGGAGTGG+AGG | 0.530866 | 7_1:-61470157 | None:intergenic |
| CGATCTTCCCATCGGATAGA+CGG | 0.533465 | 7_1:-61470115 | None:intergenic |
| TGTCTTCAACATGTAAAGCC+TGG | 0.533805 | 7_1:+61472171 | Msa1028510:CDS |
| AGCGAGGGAGTGGAGGAGTA+CGG | 0.537017 | 7_1:-61470150 | None:intergenic |
| CGGAGAGAGAATCGAGTTCG+AGG | 0.537862 | 7_1:-61470061 | None:intergenic |
| CCACTCAGCCGTCTATCCGA+TGG | 0.540093 | 7_1:+61470107 | Msa1028510:CDS |
| ATGCGCTTTCAGCTTCCGGT+TGG | 0.540390 | 7_1:+61470381 | Msa1028510:CDS |
| CGGCGCGTGGGAGGTAAGCG+AGG | 0.541694 | 7_1:-61470166 | None:intergenic |
| GGAGTGGAGGAGTACGGCGG+CGG | 0.541811 | 7_1:-61470144 | None:intergenic |
| AAAGAAAGTAGGTGAAGTCA+AGG | 0.542154 | 7_1:+61473759 | Msa1028510:CDS |
| CGCAGCGAGGGAGGAATCCA+CGG | 0.542170 | 7_1:-61470246 | None:intergenic |
| AGACGACGCTGAGCGGCGCG+TGG | 0.543165 | 7_1:-61470179 | None:intergenic |
| CACCGGCAGCAAGAGATCGC+AGG | 0.545368 | 7_1:-61474379 | None:intergenic |
| CTGTTCAGCCACTGTGCCGA+GGG | 0.547000 | 7_1:+61470411 | Msa1028510:CDS |
| TGGGAGAATTGGACATTGGA+AGG | 0.547218 | 7_1:+61474934 | Msa1028510:CDS |
| CTCTTCTTCTGCATCAGACA+GGG | 0.548490 | 7_1:-61473623 | None:intergenic |
| AGAGGATGAGGTGATAGGAC+CGG | 0.552277 | 7_1:-61470202 | None:intergenic |
| TTGGCAGCTTCAGACGAAGA+TGG | 0.552506 | 7_1:+61475789 | Msa1028510:CDS |
| GAGACCGAGGTCCGCAGCGA+GGG | 0.555905 | 7_1:-61470258 | None:intergenic |
| CTGCGATCTCTTGCTGCCGG+TGG | 0.556474 | 7_1:+61474380 | Msa1028510:CDS |
| GGAGTCCTCATCCCAGCACC+AGG | 0.560456 | 7_1:+61473780 | Msa1028510:CDS |
| CACTGTGCCGAGGGATGCGA+CGG | 0.560846 | 7_1:+61470420 | Msa1028510:CDS |
| GAAAGCTCCCAAAAGAAAGT+AGG | 0.564476 | 7_1:+61473748 | Msa1028510:CDS |
| AAAGAGTTAAAGGTGGAGGC+TGG | 0.566883 | 7_1:+61474154 | Msa1028510:CDS |
| TTAAAATTAATCATTTGTTG+AGG | 0.567232 | 7_1:+61476015 | Msa1028510:three_prime_UTR |
| CGAGGGATGCGACGGTGTCG+TGG | 0.567672 | 7_1:+61470428 | Msa1028510:CDS |
| CAAACTTGAAACCTGGTGCT+GGG | 0.568873 | 7_1:-61473791 | None:intergenic |
| GTCCAAAGCACATCCAGCTA+TGG | 0.570230 | 7_1:-61472371 | None:intergenic |
| CGGCGCGGTCAGCAGAGCCA+AGG | 0.575908 | 7_1:-61470226 | None:intergenic |
| GCCACAATGGATGGAAGCAT+GGG | 0.576187 | 7_1:+61472405 | Msa1028510:CDS |
| TCTGTTCAGCCACTGTGCCG+AGG | 0.578797 | 7_1:+61470410 | Msa1028510:CDS |
| ACGATTAAGGGAAGTGATGG+CGG | 0.578951 | 7_1:-61470011 | None:intergenic |
| CATAGATGATGAATGGAGAC+TGG | 0.581790 | 7_1:+61474960 | Msa1028510:CDS |
| AAGTGCAGATTACAGTGAAG+AGG | 0.584275 | 7_1:+61473525 | Msa1028510:CDS |
| GCTTGACTTTAGAGCTTGAG+TGG | 0.584279 | 7_1:-61474037 | None:intergenic |
| ACCCATGCTTCCATCCATTG+TGG | 0.586486 | 7_1:-61472406 | None:intergenic |
| GCTGAGTGGAACGTGTTCGA+CGG | 0.587829 | 7_1:-61470093 | None:intergenic |
| GAAAGAAGGAACATCTCAGA+GGG | 0.595899 | 7_1:+61473915 | Msa1028510:CDS |
| TGGGAAGAGCCTACAAATGG+GGG | 0.596831 | 7_1:-61469863 | None:intergenic |
| AGGCAAAGAGTTAAAGGTGG+AGG | 0.596885 | 7_1:+61474150 | Msa1028510:CDS |
| TGATGAAGTTACAGTTATGG+TGG | 0.597854 | 7_1:-61469913 | None:intergenic |
| TTGGGAAGAGCCTACAAATG+GGG | 0.598795 | 7_1:-61469864 | None:intergenic |
| AGAAAGAAGGAACATCTCAG+AGG | 0.600766 | 7_1:+61473914 | Msa1028510:CDS |
| GTTACGATTAAGGGAAGTGA+TGG | 0.600921 | 7_1:-61470014 | None:intergenic |
| GCGCTGCACTTTATGTCTCA+AGG | 0.601054 | 7_1:+61474130 | Msa1028510:CDS |
| GACAATGCAAATTATTAGTG+CGG | 0.603597 | 7_1:+61472146 | Msa1028510:CDS |
| AAACACTACAAAGACTTCGA+AGG | 0.605871 | 7_1:-61475855 | None:intergenic |
| CATCTACTCGATCTGAAGGA+AGG | 0.607026 | 7_1:+61473824 | Msa1028510:CDS |
| AAACCGGCTAGCACGTCAGA+GGG | 0.612297 | 7_1:+61469887 | Msa1028510:five_prime_UTR |
| AGTACATCTACTCGATCTGA+AGG | 0.616074 | 7_1:+61473820 | Msa1028510:CDS |
| GTGCTTTGGACGGTGCAGAA+GGG | 0.620933 | 7_1:+61472383 | Msa1028510:CDS |
| GGCGCGTGGGAGGTAAGCGA+GGG | 0.621529 | 7_1:-61470165 | None:intergenic |
| TCTCGTTTGTTAGAGCACAA+TGG | 0.627555 | 7_1:-61472125 | None:intergenic |
| TGTTGATACATCACGTGCTG+AGG | 0.628919 | 7_1:+61470292 | Msa1028510:CDS |
| GGAGAGAGAATCGAGTTCGA+GGG | 0.632986 | 7_1:-61470060 | None:intergenic |
| TGATGCAGAAGAAGAGAGTG+AGG | 0.634534 | 7_1:+61473630 | Msa1028510:CDS |
| TCAGAGTCAAACTTGAAACC+TGG | 0.636059 | 7_1:-61473798 | None:intergenic |
| GGCGGATTCGATCTTCCCAT+CGG | 0.643072 | 7_1:-61470123 | None:intergenic |
| GAGCGATATAAGGTCACTTG+CGG | 0.644486 | 7_1:-61472103 | None:intergenic |
| GAGGGAGTGGAGGAGTACGG+CGG | 0.645213 | 7_1:-61470147 | None:intergenic |
| TGTCTGGGAGAATTGGACAT+TGG | 0.647412 | 7_1:+61474930 | Msa1028510:CDS |
| ACGGTGCAGAAGGGCCACAA+TGG | 0.647422 | 7_1:+61472392 | Msa1028510:CDS |
| AAAACCGGCTAGCACGTCAG+AGG | 0.648044 | 7_1:+61469886 | Msa1028510:five_prime_UTR |
| GGAGATCGCTGATACTGTGA+TGG | 0.648149 | 7_1:+61470313 | Msa1028510:CDS |
| GACAATAAAATACAAGGACA+AGG | 0.651788 | 7_1:-61476078 | None:intergenic |
| GGCGTAGCGTTGTTACGGTG+AGG | 0.652434 | 7_1:-61469990 | None:intergenic |
| TGCAGAAGAAGAGAGTGAGG+TGG | 0.653193 | 7_1:+61473633 | Msa1028510:CDS |
| CATGAACAAGACGGAGACCG+AGG | 0.659319 | 7_1:-61470271 | None:intergenic |
| CGTCGCATCCCTCGGCACAG+TGG | 0.660281 | 7_1:-61470419 | None:intergenic |
| GGTGAATTGTAGAAACCCAT+CGG | 0.662874 | 7_1:+61474981 | Msa1028510:CDS |
| AGGGATGATACTGCTATGAG+TGG | 0.663084 | 7_1:+61473934 | Msa1028510:CDS |
| CCATCGGATAGACGGCTGAG+TGG | 0.668447 | 7_1:-61470107 | None:intergenic |
| CGTGGATTCCTCCCTCGCTG+CGG | 0.671987 | 7_1:+61470247 | Msa1028510:CDS |
| TCAAGGCAAAGAGTTAAAGG+TGG | 0.684489 | 7_1:+61474147 | Msa1028510:CDS |
| ATGTATCAACATGAACAAGA+CGG | 0.687383 | 7_1:-61470280 | None:intergenic |
| ACGAAGATGGAATTACACGT+TGG | 0.688566 | 7_1:+61475802 | Msa1028510:CDS |
| AAGCTCTAAAGTCAAGCACA+AGG | 0.691267 | 7_1:+61474043 | Msa1028510:CDS |
| ATAGCTGGATGTGCTTTGGA+CGG | 0.694756 | 7_1:+61472373 | Msa1028510:CDS |
| GGACCGGAGACGACGCTGAG+CGG | 0.696565 | 7_1:-61470186 | None:intergenic |
| ATCGAGATCTAAATCCAGTG+CGG | 0.740813 | 7_1:+61469962 | Msa1028510:five_prime_UTR |
| CGAGGGAGGAATCCACGGCG+CGG | 0.757334 | 7_1:-61470241 | None:intergenic |
| TTGAGACATAAAGTGCAGCG+CGG | 0.787802 | 7_1:-61474128 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CACTTATTTATTTATATTTT+GGG | + | chr7_1:61472198-61472217 | Msa1028510:intron | 10.0% |
| !!! | ACTTATTTATTTATATTTTG+GGG | + | chr7_1:61472199-61472218 | Msa1028510:intron | 10.0% |
| !! | ACCTTATAATTTAATTAAAA+GGG | + | chr7_1:61473293-61473312 | Msa1028510:intron | 10.0% |
| !!! | ATGCATTTTAAAAAAAATAA+TGG | - | chr7_1:61475433-61475452 | None:intergenic | 10.0% |
| !! | AAAATCTATAATGTTAATAC+TGG | + | chr7_1:61470613-61470632 | Msa1028510:intron | 15.0% |
| !!! | GCACTTATTTATTTATATTT+TGG | + | chr7_1:61472197-61472216 | Msa1028510:intron | 15.0% |
| !!! | TTGTTTTTGTAATTTTTCAT+AGG | + | chr7_1:61472274-61472293 | Msa1028510:intron | 15.0% |
| !! | AAACTTTATTGTGAAAATAT+TGG | + | chr7_1:61473141-61473160 | Msa1028510:intron | 15.0% |
| !! | CACCTTATAATTTAATTAAA+AGG | + | chr7_1:61473292-61473311 | Msa1028510:intron | 15.0% |
| !!! | TCCCTTTTAATTAAATTATA+AGG | - | chr7_1:61473297-61473316 | None:intergenic | 15.0% |
| !! | AAAATACTTGATGAAATATA+TGG | - | chr7_1:61474298-61474317 | None:intergenic | 15.0% |
| !!! | TTCATTTTAAATTACTAACA+AGG | - | chr7_1:61475512-61475531 | None:intergenic | 15.0% |
| !!! | TTAAAATTAATCATTTGTTG+AGG | + | chr7_1:61476015-61476034 | Msa1028510:three_prime_UTR | 15.0% |
| !! | GGTAGAAAATTAGTTAATAT+AGG | - | chr7_1:61471649-61471668 | None:intergenic | 20.0% |
| !! | TTAAACCCTTTCTAATTTAA+GGG | - | chr7_1:61471892-61471911 | None:intergenic | 20.0% |
| !! | AGGAATAAAAACAACTATTT+GGG | - | chr7_1:61472503-61472522 | None:intergenic | 20.0% |
| !! | AAGGAATAAAAACAACTATT+TGG | - | chr7_1:61472504-61472523 | None:intergenic | 20.0% |
| !!! | TTTATAATCCCATTTTTTCT+AGG | - | chr7_1:61472810-61472829 | None:intergenic | 20.0% |
| !! | AATGGGATTATAAATAATGA+TGG | + | chr7_1:61472816-61472835 | Msa1028510:intron | 20.0% |
| !! | TTCCAAAATCAATTTATTCT+AGG | - | chr7_1:61472881-61472900 | None:intergenic | 20.0% |
| !!! | AGAATAAATTGATTTTGGAA+TGG | + | chr7_1:61472881-61472900 | Msa1028510:intron | 20.0% |
| !! | AATTTGTATTTACCCAATTT+AGG | + | chr7_1:61472975-61472994 | Msa1028510:intron | 20.0% |
| !!! | TATTGGTTTGTCAATTTAAT+TGG | + | chr7_1:61473158-61473177 | Msa1028510:intron | 20.0% |
| !!! | AAGTATTTTAGACTTGTAAA+AGG | + | chr7_1:61474309-61474328 | Msa1028510:intron | 20.0% |
| !! | GTAAAACCATTATAAATACA+AGG | - | chr7_1:61474608-61474627 | None:intergenic | 20.0% |
| !! | ATTATATGAAAGCTAAGATT+TGG | + | chr7_1:61474772-61474791 | Msa1028510:intron | 20.0% |
| !! | ATTGTGATATTAATAGTAGA+TGG | - | chr7_1:61474808-61474827 | None:intergenic | 20.0% |
| !! | AACGTTTATAACAAAATTGT+AGG | - | chr7_1:61474853-61474872 | None:intergenic | 20.0% |
| !! | TAGCTGTATATATAATATTG+TGG | + | chr7_1:61475089-61475108 | Msa1028510:intron | 20.0% |
| !!! | AAATATAGAATATGCTTTTC+AGG | + | chr7_1:61475141-61475160 | Msa1028510:intron | 20.0% |
| !! | TTATAGTTTATTAACAATCG+AGG | + | chr7_1:61475264-61475283 | Msa1028510:intron | 20.0% |
| !! | TATAGTTTATTAACAATCGA+GGG | + | chr7_1:61475265-61475284 | Msa1028510:intron | 20.0% |
| !! | TTGTATCCATGTTTATTAAA+TGG | + | chr7_1:61475641-61475660 | Msa1028510:intron | 20.0% |
| !! | TCATATATACATTGAGATAT+TGG | + | chr7_1:61475770-61475789 | Msa1028510:CDS | 20.0% |
| !! | AACAAACATTTGAAAAATCA+AGG | - | chr7_1:61475922-61475941 | None:intergenic | 20.0% |
| !! | AATGTTTGTTTGTAAAAGAT+TGG | + | chr7_1:61475932-61475951 | Msa1028510:three_prime_UTR | 20.0% |
| !! | CAATATGACAATAAAATACA+AGG | - | chr7_1:61476087-61476106 | None:intergenic | 20.0% |
| !!! | TTTTATTGTCATATTGTAGT+AGG | + | chr7_1:61476091-61476110 | Msa1028510:three_prime_UTR | 20.0% |
| ! | TATGCTAGTGATATTTATGT+TGG | + | chr7_1:61470793-61470812 | Msa1028510:intron | 25.0% |
| !!! | ATGTTTTTGTTGAGGAAAAT+TGG | + | chr7_1:61470864-61470883 | Msa1028510:intron | 25.0% |
| !!! | TTTTTGAAACGATCAATGTT+AGG | - | chr7_1:61471067-61471086 | None:intergenic | 25.0% |
| !! | GTGAAATGTTATCATTGTTT+TGG | + | chr7_1:61471144-61471163 | Msa1028510:intron | 25.0% |
| ! | TTGAATGTAATCAAATGTCT+TGG | - | chr7_1:61471324-61471343 | None:intergenic | 25.0% |
| !! | TCATTTTCTCAAATTATCAC+CGG | + | chr7_1:61471349-61471368 | Msa1028510:intron | 25.0% |
| ! | ATATGAAACACAATTACAAG+TGG | - | chr7_1:61471445-61471464 | None:intergenic | 25.0% |
| ! | GGTTGAGAAACAATAAATAA+GGG | - | chr7_1:61471628-61471647 | None:intergenic | 25.0% |
| ! | AGGTTGAGAAACAATAAATA+AGG | - | chr7_1:61471629-61471648 | None:intergenic | 25.0% |
| ! | TGTATACCCTTAAATTAGAA+AGG | + | chr7_1:61471883-61471902 | Msa1028510:intron | 25.0% |
| ! | GTATACCCTTAAATTAGAAA+GGG | + | chr7_1:61471884-61471903 | Msa1028510:intron | 25.0% |
| ! | GTTAAACCCTTTCTAATTTA+AGG | - | chr7_1:61471893-61471912 | None:intergenic | 25.0% |
| ! | TAAATAAATAAGTGCATACC+AGG | - | chr7_1:61472192-61472211 | None:intergenic | 25.0% |
| ! | CACAATATTTAACAGATCAA+AGG | - | chr7_1:61472230-61472249 | None:intergenic | 25.0% |
| ! | CTTTGATCTGTTAAATATTG+TGG | + | chr7_1:61472228-61472247 | Msa1028510:intron | 25.0% |
| ! | GGAATAAAAACAACTATTTG+GGG | - | chr7_1:61472502-61472521 | None:intergenic | 25.0% |
| ! | AAACATTCTACTCTAACAAA+AGG | - | chr7_1:61472523-61472542 | None:intergenic | 25.0% |
| !!! | GAATAGTTTTGTTCTTTTGA+TGG | - | chr7_1:61472563-61472582 | None:intergenic | 25.0% |
| ! | AAAGAACAAAACTATTCTCT+AGG | + | chr7_1:61472566-61472585 | Msa1028510:intron | 25.0% |
| ! | ACACACAAATATATGATAGA+TGG | - | chr7_1:61472689-61472708 | None:intergenic | 25.0% |
| ! | ATAAATAATGATGGTAGTCT+AGG | + | chr7_1:61472825-61472844 | Msa1028510:intron | 25.0% |
| ! | TGGAATGGTAAATGTTAATT+AGG | + | chr7_1:61472896-61472915 | Msa1028510:intron | 25.0% |
| ! | GGAATGGTAAATGTTAATTA+GGG | + | chr7_1:61472897-61472916 | Msa1028510:intron | 25.0% |
| !!! | TCAAATAACATTGCTATTTG+TGG | + | chr7_1:61473076-61473095 | Msa1028510:intron | 25.0% |
| ! | ATTCTTCATTAAAGCAAGTA+TGG | + | chr7_1:61473108-61473127 | Msa1028510:intron | 25.0% |
| ! | TGTACAACAATGAAAGATTT+AGG | + | chr7_1:61473234-61473253 | Msa1028510:intron | 25.0% |
| ! | GTACAACAATGAAAGATTTA+GGG | + | chr7_1:61473235-61473254 | Msa1028510:intron | 25.0% |
| !! | ATTTTTGTTGAGACTTTTGA+CGG | - | chr7_1:61473888-61473907 | None:intergenic | 25.0% |
| ! | TGATGAAATATATGGACAAA+AGG | - | chr7_1:61474290-61474309 | None:intergenic | 25.0% |
| !!! | TATGTTGATTCTTCTGTATA+TGG | + | chr7_1:61474454-61474473 | Msa1028510:intron | 25.0% |
| ! | AGTCTCTTGTGTAAAAAATA+GGG | - | chr7_1:61474516-61474535 | None:intergenic | 25.0% |
| ! | AACACACCTTGTATTTATAA+TGG | + | chr7_1:61474599-61474618 | Msa1028510:intron | 25.0% |
| !!! | AATATTGTGGTTTTCTGAAA+TGG | + | chr7_1:61475102-61475121 | Msa1028510:intron | 25.0% |
| !!! | ATATTGTGGTTTTCTGAAAT+GGG | + | chr7_1:61475103-61475122 | Msa1028510:intron | 25.0% |
| ! | CAGTAAAAATGAGAAGTAAA+TGG | - | chr7_1:61475293-61475312 | None:intergenic | 25.0% |
| ! | TTAAATTACTAACAAGGAGA+TGG | - | chr7_1:61475506-61475525 | None:intergenic | 25.0% |
| !!! | CTGAAAATGTTTTGAGTAAA+CGG | + | chr7_1:61475534-61475553 | Msa1028510:intron | 25.0% |
| !!! | TGAAAATGTTTTGAGTAAAC+GGG | + | chr7_1:61475535-61475554 | Msa1028510:intron | 25.0% |
| ! | ATGCATACTTTACTTTAGAT+TGG | + | chr7_1:61475601-61475620 | Msa1028510:intron | 25.0% |
| ! | ACTTTACTTTAGATTGGAAT+TGG | + | chr7_1:61475607-61475626 | Msa1028510:intron | 25.0% |
| ! | TCATAGCCATTTAATAAACA+TGG | - | chr7_1:61475650-61475669 | None:intergenic | 25.0% |
| !! | TGATTTGTAAGTTGAGAATT+TGG | + | chr7_1:61475667-61475686 | Msa1028510:intron | 25.0% |
| ! | GGTTTGTATTATAGTGATAA+AGG | + | chr7_1:61475881-61475900 | Msa1028510:three_prime_UTR | 25.0% |
| ! | TGTTTGTAAAAGATTGGAAT+TGG | + | chr7_1:61475938-61475957 | Msa1028510:three_prime_UTR | 25.0% |
| ATGTATCAACATGAACAAGA+CGG | - | chr7_1:61470283-61470302 | None:intergenic | 30.0% | |
| TCTCTATTTCGATGTTCATT+CGG | + | chr7_1:61470529-61470548 | Msa1028510:CDS | 30.0% | |
| GTGATTAACATGTGATTAGT+TGG | + | chr7_1:61470759-61470778 | Msa1028510:intron | 30.0% | |
| TGTAGTATTATGATGGCATT+TGG | + | chr7_1:61470822-61470841 | Msa1028510:intron | 30.0% | |
| !!! | AATTGGTTTTTTACGCAGTT+TGG | + | chr7_1:61470892-61470911 | Msa1028510:intron | 30.0% |
| GTGAATGAGAATGAGATATT+GGG | + | chr7_1:61470961-61470980 | Msa1028510:intron | 30.0% | |
| TGAATGAGAATGAGATATTG+GGG | + | chr7_1:61470962-61470981 | Msa1028510:intron | 30.0% | |
| AACAGAAATCATAATGCACA+TGG | - | chr7_1:61471173-61471192 | None:intergenic | 30.0% | |
| ! | GACTTGACTTTAGTGTATTT+TGG | + | chr7_1:61471477-61471496 | Msa1028510:intron | 30.0% |
| TTGTATTTAAGTGTCCTGTT+TGG | + | chr7_1:61471528-61471547 | Msa1028510:intron | 30.0% | |
| TGAGAACAAATATTCCAAAC+AGG | - | chr7_1:61471545-61471564 | None:intergenic | 30.0% | |
| !! | TAAATAAGGGTATTGCTAGA+AGG | - | chr7_1:61471615-61471634 | None:intergenic | 30.0% |
| TTACAAAATCTCCCTAACTT+GGG | - | chr7_1:61471743-61471762 | None:intergenic | 30.0% | |
| ATTACAAAATCTCCCTAACT+TGG | - | chr7_1:61471744-61471763 | None:intergenic | 30.0% | |
| TTCCTAAACTAAATACCCTT+GGG | - | chr7_1:61471813-61471832 | None:intergenic | 30.0% | |
| TTAGGAAGCTCATTTAATCA+TGG | + | chr7_1:61471826-61471845 | Msa1028510:intron | 30.0% | |
| TAGGAAGCTCATTTAATCAT+GGG | + | chr7_1:61471827-61471846 | Msa1028510:intron | 30.0% | |
| ATTTATCATGACTTGAACCA+AGG | + | chr7_1:61471914-61471933 | Msa1028510:intron | 30.0% | |
| TTTATCATGACTTGAACCAA+GGG | + | chr7_1:61471915-61471934 | Msa1028510:intron | 30.0% | |
| GACAATGCAAATTATTAGTG+CGG | + | chr7_1:61472146-61472165 | Msa1028510:CDS | 30.0% | |
| !!! | TGTGGTTTTAATTCATGTCA+TGG | + | chr7_1:61472246-61472265 | Msa1028510:intron | 30.0% |
| !! | TTAAAGCAGCTTTTGATTGA+TGG | + | chr7_1:61472346-61472365 | Msa1028510:CDS | 30.0% |
| GTTAGAGTAGAATGTTTCAT+CGG | + | chr7_1:61472526-61472545 | Msa1028510:intron | 30.0% | |
| ! | ATTTGACTTCTCACAGTAAA+AGG | + | chr7_1:61472715-61472734 | Msa1028510:intron | 30.0% |
| GCATACTGAACAATAAGAAA+TGG | + | chr7_1:61472772-61472791 | Msa1028510:intron | 30.0% | |
| !!! | TAATCCCATTTTTTCTAGGT+GGG | - | chr7_1:61472806-61472825 | None:intergenic | 30.0% |
| !!! | ATAATCCCATTTTTTCTAGG+TGG | - | chr7_1:61472807-61472826 | None:intergenic | 30.0% |
| !! | GGCCTAGAATAAATTGATTT+TGG | + | chr7_1:61472876-61472895 | Msa1028510:intron | 30.0% |
| ATGGTAAATGTTAATTAGGG+TGG | + | chr7_1:61472900-61472919 | Msa1028510:intron | 30.0% | |
| CACATGATGAATCCTAAATT+GGG | - | chr7_1:61472990-61473009 | None:intergenic | 30.0% | |
| ACACATGATGAATCCTAAAT+TGG | - | chr7_1:61472991-61473010 | None:intergenic | 30.0% | |
| ! | AATTTAGGATTCATCATGTG+TGG | + | chr7_1:61472990-61473009 | Msa1028510:intron | 30.0% |
| AATGAATGGTTAAGGTTACT+GGG | - | chr7_1:61473019-61473038 | None:intergenic | 30.0% | |
| TAATGAATGGTTAAGGTTAC+TGG | - | chr7_1:61473020-61473039 | None:intergenic | 30.0% | |
| AACTGGTTAATGAATGGTTA+AGG | - | chr7_1:61473027-61473046 | None:intergenic | 30.0% | |
| CAAAAATCAGATCAGAAAGA+AGG | + | chr7_1:61473901-61473920 | Msa1028510:CDS | 30.0% | |
| !! | TGTACTGAACTTTTGAAAGA+TGG | + | chr7_1:61474078-61474097 | Msa1028510:CDS | 30.0% |
| !! | GTACTGAACTTTTGAAAGAT+GGG | + | chr7_1:61474079-61474098 | Msa1028510:CDS | 30.0% |
| !! | CCTTATTTCTGAAGATGATA+AGG | - | chr7_1:61474230-61474249 | None:intergenic | 30.0% |
| CCTTATCATCTTCAGAAATA+AGG | + | chr7_1:61474227-61474246 | Msa1028510:CDS | 30.0% | |
| ! | CAGAAATAAGGTTTGTTTGA+AGG | + | chr7_1:61474239-61474258 | Msa1028510:intron | 30.0% |
| TCTTTAAGCTAACTAATCCA+AGG | + | chr7_1:61474263-61474282 | Msa1028510:intron | 30.0% | |
| ! | ACTTTTAATGCATTTGCTTC+AGG | + | chr7_1:61474346-61474365 | Msa1028510:intron | 30.0% |
| ! | TACCTGTAATAATTTTCCAC+CGG | - | chr7_1:61474399-61474418 | None:intergenic | 30.0% |
| TACAACATAGTTAAGCCTAA+GGG | - | chr7_1:61474436-61474455 | None:intergenic | 30.0% | |
| ATACAACATAGTTAAGCCTA+AGG | - | chr7_1:61474437-61474456 | None:intergenic | 30.0% | |
| CTTGTGTAAAAAATAGGGTA+CGG | - | chr7_1:61474511-61474530 | None:intergenic | 30.0% | |
| CAGTCTCTTGTGTAAAAAAT+AGG | - | chr7_1:61474517-61474536 | None:intergenic | 30.0% | |
| AGCACTACTTGTATTTATAG+TGG | + | chr7_1:61474656-61474675 | Msa1028510:intron | 30.0% | |
| CTTTAATTGTACAACTTCCA+AGG | - | chr7_1:61474724-61474743 | None:intergenic | 30.0% | |
| CTTGGAAGTTGTACAATTAA+AGG | + | chr7_1:61474722-61474741 | Msa1028510:intron | 30.0% | |
| TTTGCAGATCAATAGAAGAA+TGG | + | chr7_1:61474879-61474898 | Msa1028510:intron | 30.0% | |
| !!! | TAGTCATAGTTTTGATGTCT+GGG | + | chr7_1:61474915-61474934 | Msa1028510:CDS | 30.0% |
| TGATCCGTATTTGATACTAA+AGG | + | chr7_1:61475011-61475030 | Msa1028510:intron | 30.0% | |
| GATCCGTATTTGATACTAAA+GGG | + | chr7_1:61475012-61475031 | Msa1028510:intron | 30.0% | |
| CATCCCTTTAGTATCAAATA+CGG | - | chr7_1:61475018-61475037 | None:intergenic | 30.0% | |
| CTAAAGGGATGAGATTTAAA+TGG | + | chr7_1:61475027-61475046 | Msa1028510:intron | 30.0% | |
| ! | TGTTTCTTCACTTCTTCTTT+TGG | + | chr7_1:61475171-61475190 | Msa1028510:intron | 30.0% |
| ACTTCTGTTCATAGGAAAAT+GGG | - | chr7_1:61475561-61475580 | None:intergenic | 30.0% | |
| TATGCATAGTGTAATGTTCA+AGG | - | chr7_1:61475588-61475607 | None:intergenic | 30.0% | |
| ! | GAAGTCTTTGTAGTGTTTTT+GGG | + | chr7_1:61475860-61475879 | Msa1028510:three_prime_UTR | 30.0% |
| GACAATAAAATACAAGGACA+AGG | - | chr7_1:61476081-61476100 | None:intergenic | 30.0% | |
| TGATGAAGTTACAGTTATGG+TGG | - | chr7_1:61469916-61469935 | None:intergenic | 35.0% | |
| CAGTGATGAAGTTACAGTTA+TGG | - | chr7_1:61469919-61469938 | None:intergenic | 35.0% | |
| ! | CAGTTTAGGGTTACGATTAA+GGG | - | chr7_1:61470026-61470045 | None:intergenic | 35.0% |
| ACAATCTTCGATGCAGTTTA+GGG | - | chr7_1:61470039-61470058 | None:intergenic | 35.0% | |
| AACAATCTTCGATGCAGTTT+AGG | - | chr7_1:61470040-61470059 | None:intergenic | 35.0% | |
| ! | AGTGCTACGTAGATTTTACT+TGG | + | chr7_1:61470727-61470746 | Msa1028510:intron | 35.0% |
| GCGAAGTTGTAGTATTATGA+TGG | + | chr7_1:61470815-61470834 | Msa1028510:intron | 35.0% | |
| GAGGAAAATTGGACTGTAAT+TGG | + | chr7_1:61470875-61470894 | Msa1028510:intron | 35.0% | |
| CGTGAATGAGAATGAGATAT+TGG | + | chr7_1:61470960-61470979 | Msa1028510:intron | 35.0% | |
| TTGTTTGAACTGAGGGTTAA+AGG | + | chr7_1:61470999-61471018 | Msa1028510:intron | 35.0% | |
| !! | ATCAAAAGTGTTGATGCTAG+AGG | - | chr7_1:61471272-61471291 | None:intergenic | 35.0% |
| ACACTTAAATACAAGACGGA+GGG | - | chr7_1:61471522-61471541 | None:intergenic | 35.0% | |
| CAGGACACTTAAATACAAGA+CGG | - | chr7_1:61471526-61471545 | None:intergenic | 35.0% | |
| ! | AGAAAGTGTATTGGAGGAAA+TGG | - | chr7_1:61471713-61471732 | None:intergenic | 35.0% |
| CTTCCTAAACTAAATACCCT+TGG | - | chr7_1:61471814-61471833 | None:intergenic | 35.0% | |
| ! | ACGATCGGATTCTATGATTT+TGG | + | chr7_1:61471982-61472001 | Msa1028510:intron | 35.0% |
| ! | GGTGCTTTTCTTGTAAATAC+TGG | + | chr7_1:61472295-61472314 | Msa1028510:intron | 35.0% |
| AAGCATGGGTATGGTAAATT+TGG | + | chr7_1:61472419-61472438 | Msa1028510:intron | 35.0% | |
| !! | AACTATTCTCTAGGATCACT+AGG | + | chr7_1:61472575-61472594 | Msa1028510:intron | 35.0% |
| !! | CATCACTTATTTTCTCAGTG+TGG | + | chr7_1:61472614-61472633 | Msa1028510:intron | 35.0% |
| ACCATTCATTAACCAGTTCT+TGG | + | chr7_1:61473029-61473048 | Msa1028510:intron | 35.0% | |
| CCATTCATTAACCAGTTCTT+GGG | + | chr7_1:61473030-61473049 | Msa1028510:intron | 35.0% | |
| CATACAAAAAACCCAAGAAC+TGG | - | chr7_1:61473044-61473063 | None:intergenic | 35.0% | |
| CTTAACCTGAAGCAGAAATA+CGG | - | chr7_1:61473476-61473495 | None:intergenic | 35.0% | |
| TTGCAGACATTCTTCATTGA+TGG | + | chr7_1:61473583-61473602 | Msa1028510:CDS | 35.0% | |
| TGCAGACATTCTTCATTGAT+GGG | + | chr7_1:61473584-61473603 | Msa1028510:CDS | 35.0% | |
| ! | GACTTCACCTACTTTCTTTT+GGG | - | chr7_1:61473758-61473777 | None:intergenic | 35.0% |
| ! | TGACTTCACCTACTTTCTTT+TGG | - | chr7_1:61473759-61473778 | None:intergenic | 35.0% |
| AAAGAAAGTAGGTGAAGTCA+AGG | + | chr7_1:61473759-61473778 | Msa1028510:CDS | 35.0% | |
| GGTTCTTGTATAGATTCTAC+TGG | - | chr7_1:61474012-61474031 | None:intergenic | 35.0% | |
| ATATATGGACAAAAGGTCCT+TGG | - | chr7_1:61474283-61474302 | None:intergenic | 35.0% | |
| ACAACATAGTTAAGCCTAAG+GGG | - | chr7_1:61474435-61474454 | None:intergenic | 35.0% | |
| ! | TTACACAAGAGACTGTTTCT+AGG | + | chr7_1:61474522-61474541 | Msa1028510:intron | 35.0% |
| ! | TGTTTTGTCATGTGACTGAA+AGG | - | chr7_1:61474562-61474581 | None:intergenic | 35.0% |
| ! | TAGTAAGTAAGAACTAGCCT+TGG | + | chr7_1:61474704-61474723 | Msa1028510:intron | 35.0% |
| !!! | CTAGTCATAGTTTTGATGTC+TGG | + | chr7_1:61474914-61474933 | Msa1028510:CDS | 35.0% |
| AAGGTTCCATAGATGATGAA+TGG | + | chr7_1:61474953-61474972 | Msa1028510:CDS | 35.0% | |
| ! | GTAGAAGATGATGATGATGA+AGG | - | chr7_1:61475354-61475373 | None:intergenic | 35.0% |
| GTAGTGAATGTTTAGAGAGA+AGG | - | chr7_1:61475476-61475495 | None:intergenic | 35.0% | |
| GACTTCTGTTCATAGGAAAA+TGG | - | chr7_1:61475562-61475581 | None:intergenic | 35.0% | |
| AAGGAATGACTTCTGTTCAT+AGG | - | chr7_1:61475569-61475588 | None:intergenic | 35.0% | |
| AAACACTACAAAGACTTCGA+AGG | - | chr7_1:61475858-61475877 | None:intergenic | 35.0% | |
| ! | CGAAGTCTTTGTAGTGTTTT+TGG | + | chr7_1:61475859-61475878 | Msa1028510:three_prime_UTR | 35.0% |
| !! | GAACGTTGATGAGATTTTGT+TGG | + | chr7_1:61476037-61476056 | Msa1028510:three_prime_UTR | 35.0% |
| TGTTGGAGTGAAGATGAAAT+TGG | + | chr7_1:61476054-61476073 | Msa1028510:three_prime_UTR | 35.0% | |
| TTTGGGAAGAGCCTACAAAT+GGG | - | chr7_1:61469868-61469887 | None:intergenic | 40.0% | |
| !! | TTTTGGGAAGAGCCTACAAA+TGG | - | chr7_1:61469869-61469888 | None:intergenic | 40.0% |
| ATCGAGATCTAAATCCAGTG+CGG | + | chr7_1:61469962-61469981 | Msa1028510:five_prime_UTR | 40.0% | |
| GTTACGATTAAGGGAAGTGA+TGG | - | chr7_1:61470017-61470036 | None:intergenic | 40.0% | |
| ! | GCAGTTTAGGGTTACGATTA+AGG | - | chr7_1:61470027-61470046 | None:intergenic | 40.0% |
| GTTGTGTCAGTGTTGTATAC+CGG | + | chr7_1:61470681-61470700 | Msa1028510:intron | 40.0% | |
| !! | GGGGGATTATGTTTTTGTTG+AGG | + | chr7_1:61470856-61470875 | Msa1028510:intron | 40.0% |
| TGAGAATGAGATATTGGGGT+TGG | + | chr7_1:61470966-61470985 | Msa1028510:intron | 40.0% | |
| GAGAATGAGATATTGGGGTT+GGG | + | chr7_1:61470967-61470986 | Msa1028510:intron | 40.0% | |
| ! | AGCTCAACTTGTTTGAACTG+AGG | + | chr7_1:61470991-61471010 | Msa1028510:intron | 40.0% |
| ! | GCTCAACTTGTTTGAACTGA+GGG | + | chr7_1:61470992-61471011 | Msa1028510:intron | 40.0% |
| GAACTGAGGGTTAAAGGAAT+TGG | + | chr7_1:61471005-61471024 | Msa1028510:intron | 40.0% | |
| AAAGGAATTGGAAGTCTCGA+AGG | + | chr7_1:61471017-61471036 | Msa1028510:intron | 40.0% | |
| ! | CTTTTGATCAAAGCCATGTC+TGG | + | chr7_1:61471284-61471303 | Msa1028510:intron | 40.0% |
| GACACTTAAATACAAGACGG+AGG | - | chr7_1:61471523-61471542 | None:intergenic | 40.0% | |
| TTCTACCTAGCTACATCACT+AGG | + | chr7_1:61471662-61471681 | Msa1028510:intron | 40.0% | |
| TCAATCCTAGTGATGTAGCT+AGG | - | chr7_1:61471670-61471689 | None:intergenic | 40.0% | |
| ! | GAACTCAGAAAGTGTATTGG+AGG | - | chr7_1:61471719-61471738 | None:intergenic | 40.0% |
| ! | GGAGAACTCAGAAAGTGTAT+TGG | - | chr7_1:61471722-61471741 | None:intergenic | 40.0% |
| TTTCTGAGTTCTCCCAAGTT+AGG | + | chr7_1:61471728-61471747 | Msa1028510:intron | 40.0% | |
| TTCTGAGTTCTCCCAAGTTA+GGG | + | chr7_1:61471729-61471748 | Msa1028510:intron | 40.0% | |
| !!! | AATACCCTTGGGCTACTTTT+GGG | - | chr7_1:61471802-61471821 | None:intergenic | 40.0% |
| !! | AAATACCCTTGGGCTACTTT+TGG | - | chr7_1:61471803-61471822 | None:intergenic | 40.0% |
| !! | AGCCCAAGGGTATTTAGTTT+AGG | + | chr7_1:61471808-61471827 | Msa1028510:intron | 40.0% |
| GATATTTAGCTAGAAGCCCT+TGG | - | chr7_1:61471934-61471953 | None:intergenic | 40.0% | |
| ! | GTCTGTTCAGGATTAGCATT+TGG | - | chr7_1:61471964-61471983 | None:intergenic | 40.0% |
| TTCTACAATCTTGCACTCAC+AGG | + | chr7_1:61472017-61472036 | Msa1028510:intron | 40.0% | |
| TCTACAATCTTGCACTCACA+GGG | + | chr7_1:61472018-61472037 | Msa1028510:intron | 40.0% | |
| ! | TCTCGTTTGTTAGAGCACAA+TGG | - | chr7_1:61472128-61472147 | None:intergenic | 40.0% |
| TGTCTTCAACATGTAAAGCC+TGG | + | chr7_1:61472171-61472190 | Msa1028510:CDS | 40.0% | |
| TTGATTGATGGAACCATAGC+TGG | + | chr7_1:61472358-61472377 | Msa1028510:CDS | 40.0% | |
| TCAACATTGCAACTGCAACT+AGG | - | chr7_1:61472743-61472762 | None:intergenic | 40.0% | |
| !!! | CATTTTTTCTAGGTGGGACA+GGG | - | chr7_1:61472800-61472819 | None:intergenic | 40.0% |
| CTGTCCCACCTAGAAAAAAT+GGG | + | chr7_1:61472799-61472818 | Msa1028510:intron | 40.0% | |
| ! | TTGGTGGTACGCTAAAAGTA+AGG | + | chr7_1:61472855-61472874 | Msa1028510:intron | 40.0% |
| CCCAAGAACTGGTTAATGAA+TGG | - | chr7_1:61473033-61473052 | None:intergenic | 40.0% | |
| ! | CTTTACCGTATTTCTGCTTC+AGG | + | chr7_1:61473468-61473487 | Msa1028510:intron | 40.0% |
| ! | CGTATTTCTGCTTCAGGTTA+AGG | + | chr7_1:61473474-61473493 | Msa1028510:intron | 40.0% |
| !! | CGTGGAAGTATCAACACATT+AGG | - | chr7_1:61473505-61473524 | None:intergenic | 40.0% |
| AAGTGCAGATTACAGTGAAG+AGG | + | chr7_1:61473525-61473544 | Msa1028510:CDS | 40.0% | |
| CAGATTACAGTGAAGAGGTT+TGG | + | chr7_1:61473530-61473549 | Msa1028510:CDS | 40.0% | |
| TTACAGTGAAGAGGTTTGGA+TGG | + | chr7_1:61473534-61473553 | Msa1028510:CDS | 40.0% | |
| AAGAGGTTTGGATGGAGATA+AGG | + | chr7_1:61473542-61473561 | Msa1028510:CDS | 40.0% | |
| AGAGGTTTGGATGGAGATAA+GGG | + | chr7_1:61473543-61473562 | Msa1028510:CDS | 40.0% | |
| GTTAGAGAGCAGTTAGATGA+TGG | + | chr7_1:61473712-61473731 | Msa1028510:CDS | 40.0% | |
| !! | ACTTTCTTTTGGGAGCTTTC+AGG | - | chr7_1:61473748-61473767 | None:intergenic | 40.0% |
| GAAAGCTCCCAAAAGAAAGT+AGG | + | chr7_1:61473748-61473767 | Msa1028510:CDS | 40.0% | |
| TCAGAGTCAAACTTGAAACC+TGG | - | chr7_1:61473801-61473820 | None:intergenic | 40.0% | |
| AGTACATCTACTCGATCTGA+AGG | + | chr7_1:61473820-61473839 | Msa1028510:CDS | 40.0% | |
| !! | TTGACGGATATGCCTCTTTT+TGG | - | chr7_1:61473872-61473891 | None:intergenic | 40.0% |
| AGAAAGAAGGAACATCTCAG+AGG | + | chr7_1:61473914-61473933 | Msa1028510:CDS | 40.0% | |
| GAAAGAAGGAACATCTCAGA+GGG | + | chr7_1:61473915-61473934 | Msa1028510:CDS | 40.0% | |
| ! | TTTAGAGCTTGAGTGGCAAT+CGG | - | chr7_1:61474033-61474052 | None:intergenic | 40.0% |
| !! | AAGCTCTAAAGTCAAGCACA+AGG | + | chr7_1:61474043-61474062 | Msa1028510:CDS | 40.0% |
| GTCTCAAGGCAAAGAGTTAA+AGG | + | chr7_1:61474144-61474163 | Msa1028510:CDS | 40.0% | |
| TCAAGGCAAAGAGTTAAAGG+TGG | + | chr7_1:61474147-61474166 | Msa1028510:CDS | 40.0% | |
| ! | TCTTTTTGACACATCTGGCA+TGG | - | chr7_1:61474190-61474209 | None:intergenic | 40.0% |
| ! | GGATCTCTTTTTGACACATC+TGG | - | chr7_1:61474195-61474214 | None:intergenic | 40.0% |
| CATTTGCTTCAGGACACAAT+TGG | + | chr7_1:61474356-61474375 | Msa1028510:intron | 40.0% | |
| TGCCGGTGGAAAATTATTAC+AGG | + | chr7_1:61474394-61474413 | Msa1028510:CDS | 40.0% | |
| AATTTGATCAGACTCCCCTT+AGG | + | chr7_1:61474418-61474437 | Msa1028510:intron | 40.0% | |
| ACAAGGTGTGTTTGTCACAA+CGG | - | chr7_1:61474591-61474610 | None:intergenic | 40.0% | |
| !! | GTTTTGATGTCTGGGAGAAT+TGG | + | chr7_1:61474923-61474942 | Msa1028510:CDS | 40.0% |
| CAGTCTCCATTCATCATCTA+TGG | - | chr7_1:61474962-61474981 | None:intergenic | 40.0% | |
| CATAGATGATGAATGGAGAC+TGG | + | chr7_1:61474960-61474979 | Msa1028510:CDS | 40.0% | |
| GGTGAATTGTAGAAACCCAT+CGG | + | chr7_1:61474981-61475000 | Msa1028510:CDS | 40.0% | |
| ACGGATCATAACTTACCGAT+GGG | - | chr7_1:61474999-61475018 | None:intergenic | 40.0% | |
| TACGGATCATAACTTACCGA+TGG | - | chr7_1:61475000-61475019 | None:intergenic | 40.0% | |
| ATCTCTGCGTTTCTTCCTAA+TGG | + | chr7_1:61475724-61475743 | Msa1028510:intron | 40.0% | |
| TTCCTAATGGTGCAACTACT+AGG | + | chr7_1:61475737-61475756 | Msa1028510:intron | 40.0% | |
| ACGAAGATGGAATTACACGT+TGG | + | chr7_1:61475802-61475821 | Msa1028510:CDS | 40.0% | |
| TGTAGGCTCTTCCCAAAAAC+CGG | + | chr7_1:61469871-61469890 | Msa1028510:five_prime_UTR | 45.0% | |
| ACGATTAAGGGAAGTGATGG+CGG | - | chr7_1:61470014-61470033 | None:intergenic | 45.0% | |
| TGTTGATACATCACGTGCTG+AGG | + | chr7_1:61470292-61470311 | Msa1028510:CDS | 45.0% | |
| !! | ACTGTGATGGCGTTGTTTCT+CGG | + | chr7_1:61470326-61470345 | Msa1028510:CDS | 45.0% |
| TGTTTCTCGGTCTTCTTCGT+CGG | + | chr7_1:61470339-61470358 | Msa1028510:CDS | 45.0% | |
| !! | GGTCTTGTTCTTGGGATTGT+TGG | + | chr7_1:61470449-61470468 | Msa1028510:CDS | 45.0% |
| ATCTGCTTCTGCTAGAGCTT+TGG | + | chr7_1:61470475-61470494 | Msa1028510:CDS | 45.0% | |
| ! | AGCTTTGGCTACTCGTAGTT+TGG | + | chr7_1:61470490-61470509 | Msa1028510:CDS | 45.0% |
| GCACTAACACCTCTGATCAA+AGG | - | chr7_1:61470712-61470731 | None:intergenic | 45.0% | |
| AACATAATCCCCCTGCATCA+TGG | - | chr7_1:61470849-61470868 | None:intergenic | 45.0% | |
| !! | CAAATGTCTTGGTGTTGCGT+CGG | - | chr7_1:61471313-61471332 | None:intergenic | 45.0% |
| ACAGACATGACACTGACACA+TGG | - | chr7_1:61471378-61471397 | None:intergenic | 45.0% | |
| TGTCAGTGTCATGTCTGTGT+TGG | + | chr7_1:61471380-61471399 | Msa1028510:intron | 45.0% | |
| ! | ATGTCTGTGTTGGTGCTTCA+TGG | + | chr7_1:61471390-61471409 | Msa1028510:intron | 45.0% |
| !! | TACTTTTGGGAGCTTAGGAG+GGG | - | chr7_1:61471789-61471808 | None:intergenic | 45.0% |
| !! | CTACTTTTGGGAGCTTAGGA+GGG | - | chr7_1:61471790-61471809 | None:intergenic | 45.0% |
| GCTAATCCTGAACAGACGAT+CGG | + | chr7_1:61471967-61471986 | Msa1028510:intron | 45.0% | |
| TAGAATCCGATCGTCTGTTC+AGG | - | chr7_1:61471976-61471995 | None:intergenic | 45.0% | |
| !! | GTATCCATTTTTCGTGCTGC+AGG | - | chr7_1:61472066-61472085 | None:intergenic | 45.0% |
| GAGCGATATAAGGTCACTTG+CGG | - | chr7_1:61472106-61472125 | None:intergenic | 45.0% | |
| GAGCACAATGGAGCGATATA+AGG | - | chr7_1:61472116-61472135 | None:intergenic | 45.0% | |
| AACCATAGCTGGATGTGCTT+TGG | + | chr7_1:61472369-61472388 | Msa1028510:CDS | 45.0% | |
| ! | ATAGCTGGATGTGCTTTGGA+CGG | + | chr7_1:61472373-61472392 | Msa1028510:CDS | 45.0% |
| ! | AATGGATGGAAGCATGGGTA+TGG | + | chr7_1:61472410-61472429 | Msa1028510:intron | 45.0% |
| AGCACATGCATGTAGTTGCT+GGG | + | chr7_1:61472656-61472675 | Msa1028510:intron | 45.0% | |
| !!! | CCATTTTTTCTAGGTGGGAC+AGG | - | chr7_1:61472801-61472820 | None:intergenic | 45.0% |
| CCTGTCCCACCTAGAAAAAA+TGG | + | chr7_1:61472798-61472817 | Msa1028510:intron | 45.0% | |
| ! | TGGTAGTCTAGGACAGATGT+TGG | + | chr7_1:61472836-61472855 | Msa1028510:intron | 45.0% |
| ! | TAGTCTAGGACAGATGTTGG+TGG | + | chr7_1:61472839-61472858 | Msa1028510:intron | 45.0% |
| TCACTGTAATCTGCACTTCG+TGG | - | chr7_1:61473523-61473542 | None:intergenic | 45.0% | |
| !!! | GCATCAGACAGGGCATTTTT+TGG | - | chr7_1:61473616-61473635 | None:intergenic | 45.0% |
| CTCTTCTTCTGCATCAGACA+GGG | - | chr7_1:61473626-61473645 | None:intergenic | 45.0% | |
| TCTCTTCTTCTGCATCAGAC+AGG | - | chr7_1:61473627-61473646 | None:intergenic | 45.0% | |
| TGATGCAGAAGAAGAGAGTG+AGG | + | chr7_1:61473630-61473649 | Msa1028510:CDS | 45.0% | |
| CAAACTTGAAACCTGGTGCT+GGG | - | chr7_1:61473794-61473813 | None:intergenic | 45.0% | |
| TCAAACTTGAAACCTGGTGC+TGG | - | chr7_1:61473795-61473814 | None:intergenic | 45.0% | |
| CATCTACTCGATCTGAAGGA+AGG | + | chr7_1:61473824-61473843 | Msa1028510:CDS | 45.0% | |
| AGGGATGATACTGCTATGAG+TGG | + | chr7_1:61473934-61473953 | Msa1028510:CDS | 45.0% | |
| !! | GCTTGACTTTAGAGCTTGAG+TGG | - | chr7_1:61474040-61474059 | None:intergenic | 45.0% |
| AAGTCAAGCACAAGGCTTAG+TGG | + | chr7_1:61474051-61474070 | Msa1028510:CDS | 45.0% | |
| TTGAGACATAAAGTGCAGCG+CGG | - | chr7_1:61474131-61474150 | None:intergenic | 45.0% | |
| AGGCAAAGAGTTAAAGGTGG+AGG | + | chr7_1:61474150-61474169 | Msa1028510:CDS | 45.0% | |
| AAAGAGTTAAAGGTGGAGGC+TGG | + | chr7_1:61474154-61474173 | Msa1028510:CDS | 45.0% | |
| ACACATCTGGCATGGAATCT+AGG | - | chr7_1:61474182-61474201 | None:intergenic | 45.0% | |
| ATGATAAGGAACTGTGCAGC+AGG | - | chr7_1:61474216-61474235 | None:intergenic | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | - | chr7_1:61474555-61474574 | None:intergenic | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr7_1:61474556-61474575 | None:intergenic | 45.0% | |
| TGTCTGGGAGAATTGGACAT+TGG | + | chr7_1:61474930-61474949 | Msa1028510:CDS | 45.0% | |
| TGGGAGAATTGGACATTGGA+AGG | + | chr7_1:61474934-61474953 | Msa1028510:CDS | 45.0% | |
| AGCCTAGTAGTTGCACCATT+AGG | - | chr7_1:61475742-61475761 | None:intergenic | 45.0% | |
| ! | GTGCAACTACTAGGCTGTTT+TGG | + | chr7_1:61475746-61475765 | Msa1028510:intron | 45.0% |
| !! | TGACGTGCTAGCCGGTTTTT+GGG | - | chr7_1:61469885-61469904 | None:intergenic | 50.0% |
| GGAGAGAGAATCGAGTTCGA+GGG | - | chr7_1:61470063-61470082 | None:intergenic | 50.0% | |
| CTCGAACTCGATTCTCTCTC+CGG | + | chr7_1:61470062-61470081 | Msa1028510:CDS | 50.0% | |
| CGATCTTCCCATCGGATAGA+CGG | - | chr7_1:61470118-61470137 | None:intergenic | 50.0% | |
| AGAGGATGAGGTGATAGGAC+CGG | - | chr7_1:61470205-61470224 | None:intergenic | 50.0% | |
| AAGGCAGAGGATGAGGTGAT+AGG | - | chr7_1:61470210-61470229 | None:intergenic | 50.0% | |
| TATCACCTCATCCTCTGCCT+TGG | + | chr7_1:61470209-61470228 | Msa1028510:CDS | 50.0% | |
| GGAGATCGCTGATACTGTGA+TGG | + | chr7_1:61470313-61470332 | Msa1028510:CDS | 50.0% | |
| CTGAACAGAACCAAGCCAAC+CGG | - | chr7_1:61470399-61470418 | None:intergenic | 50.0% | |
| !! | GGTGTCGTGGTCTTGTTCTT+GGG | + | chr7_1:61470441-61470460 | Msa1028510:CDS | 50.0% |
| TGGCATTTGGTCCATGATGC+AGG | + | chr7_1:61470835-61470854 | Msa1028510:intron | 50.0% | |
| GGCATTTGGTCCATGATGCA+GGG | + | chr7_1:61470836-61470855 | Msa1028510:intron | 50.0% | |
| GCATTTGGTCCATGATGCAG+GGG | + | chr7_1:61470837-61470856 | Msa1028510:intron | 50.0% | |
| CATTTGGTCCATGATGCAGG+GGG | + | chr7_1:61470838-61470857 | Msa1028510:intron | 50.0% | |
| TGACACTGACACATGGACAC+CGG | - | chr7_1:61471371-61471390 | None:intergenic | 50.0% | |
| ! | TGTGTTGGTGCTTCATGGTC+AGG | + | chr7_1:61471395-61471414 | Msa1028510:intron | 50.0% |
| !!! | GCTACTTTTGGGAGCTTAGG+AGG | - | chr7_1:61471791-61471810 | None:intergenic | 50.0% |
| !!! | TGGGCTACTTTTGGGAGCTT+AGG | - | chr7_1:61471794-61471813 | None:intergenic | 50.0% |
| AAGCTCCCAAAAGTAGCCCA+AGG | + | chr7_1:61471794-61471813 | Msa1028510:intron | 50.0% | |
| AGCTCCCAAAAGTAGCCCAA+GGG | + | chr7_1:61471795-61471814 | Msa1028510:intron | 50.0% | |
| !! | CCATTTTTCGTGCTGCAGGA+GGG | - | chr7_1:61472062-61472081 | None:intergenic | 50.0% |
| !! | TCCATTTTTCGTGCTGCAGG+AGG | - | chr7_1:61472063-61472082 | None:intergenic | 50.0% |
| GTCCAAAGCACATCCAGCTA+TGG | - | chr7_1:61472374-61472393 | None:intergenic | 50.0% | |
| ! | GCCACAATGGATGGAAGCAT+GGG | + | chr7_1:61472405-61472424 | Msa1028510:CDS | 50.0% |
| ACCCATGCTTCCATCCATTG+TGG | - | chr7_1:61472409-61472428 | None:intergenic | 50.0% | |
| CAGCAACTACATGCATGTGC+TGG | - | chr7_1:61472657-61472676 | None:intergenic | 50.0% | |
| CAGCACATGCATGTAGTTGC+TGG | + | chr7_1:61472655-61472674 | Msa1028510:intron | 50.0% | |
| GCACATGCATGTAGTTGCTG+GGG | + | chr7_1:61472657-61472676 | Msa1028510:intron | 50.0% | |
| TGCAGAAGAAGAGAGTGAGG+TGG | + | chr7_1:61473633-61473652 | Msa1028510:CDS | 50.0% | |
| GCGCTGCACTTTATGTCTCA+AGG | + | chr7_1:61474130-61474149 | Msa1028510:CDS | 50.0% | |
| TTGGCAGCTTCAGACGAAGA+TGG | + | chr7_1:61475789-61475808 | Msa1028510:CDS | 50.0% | |
| !! | CTGACGTGCTAGCCGGTTTT+TGG | - | chr7_1:61469886-61469905 | None:intergenic | 55.0% |
| AAAACCGGCTAGCACGTCAG+AGG | + | chr7_1:61469886-61469905 | Msa1028510:five_prime_UTR | 55.0% | |
| AAACCGGCTAGCACGTCAGA+GGG | + | chr7_1:61469887-61469906 | Msa1028510:five_prime_UTR | 55.0% | |
| ATGGCGGCGTAGCGTTGTTA+CGG | - | chr7_1:61469998-61470017 | None:intergenic | 55.0% | |
| CGGAGAGAGAATCGAGTTCG+AGG | - | chr7_1:61470064-61470083 | None:intergenic | 55.0% | |
| GCTGAGTGGAACGTGTTCGA+CGG | - | chr7_1:61470096-61470115 | None:intergenic | 55.0% | |
| CACTCAGCCGTCTATCCGAT+GGG | + | chr7_1:61470108-61470127 | Msa1028510:CDS | 55.0% | |
| ! | GGCGGATTCGATCTTCCCAT+CGG | - | chr7_1:61470126-61470145 | None:intergenic | 55.0% |
| CATGAACAAGACGGAGACCG+AGG | - | chr7_1:61470274-61470293 | None:intergenic | 55.0% | |
| CGTCATGCGCTTTCAGCTTC+CGG | + | chr7_1:61470377-61470396 | Msa1028510:CDS | 55.0% | |
| ATGCGCTTTCAGCTTCCGGT+TGG | + | chr7_1:61470381-61470400 | Msa1028510:CDS | 55.0% | |
| ! | CTTTCAGCTTCCGGTTGGCT+TGG | + | chr7_1:61470386-61470405 | Msa1028510:CDS | 55.0% |
| !! | CGGTGTCGTGGTCTTGTTCT+TGG | + | chr7_1:61470440-61470459 | Msa1028510:CDS | 55.0% |
| TTGGGAGCTTAGGAGGGGAA+GGG | - | chr7_1:61471784-61471803 | None:intergenic | 55.0% | |
| TTTGGGAGCTTAGGAGGGGA+AGG | - | chr7_1:61471785-61471804 | None:intergenic | 55.0% | |
| CCCTCCTGCAGCACGAAAAA+TGG | + | chr7_1:61472059-61472078 | Msa1028510:CDS | 55.0% | |
| ! | TGTGCTTTGGACGGTGCAGA+AGG | + | chr7_1:61472382-61472401 | Msa1028510:CDS | 55.0% |
| ! | GTGCTTTGGACGGTGCAGAA+GGG | + | chr7_1:61472383-61472402 | Msa1028510:CDS | 55.0% |
| TGCAGAAGGGCCACAATGGA+TGG | + | chr7_1:61472396-61472415 | Msa1028510:CDS | 55.0% | |
| GGCCACAATGGATGGAAGCA+TGG | + | chr7_1:61472404-61472423 | Msa1028510:CDS | 55.0% | |
| ! | TGAAACCTGGTGCTGGGATG+AGG | - | chr7_1:61473788-61473807 | None:intergenic | 55.0% |
| CTTCCCTCTGACGTGCTAGC+CGG | - | chr7_1:61469893-61469912 | None:intergenic | 60.0% | |
| GGCGTAGCGTTGTTACGGTG+AGG | - | chr7_1:61469993-61470012 | None:intergenic | 60.0% | |
| CCATCGGATAGACGGCTGAG+TGG | - | chr7_1:61470110-61470129 | None:intergenic | 60.0% | |
| CCACTCAGCCGTCTATCCGA+TGG | + | chr7_1:61470107-61470126 | Msa1028510:CDS | 60.0% | |
| AGCGAGGGAGTGGAGGAGTA+CGG | - | chr7_1:61470153-61470172 | None:intergenic | 60.0% | |
| CAGAGCCAAGGCAGAGGATG+AGG | - | chr7_1:61470217-61470236 | None:intergenic | 60.0% | |
| TCTGTTCAGCCACTGTGCCG+AGG | + | chr7_1:61470410-61470429 | Msa1028510:CDS | 60.0% | |
| CTGTTCAGCCACTGTGCCGA+GGG | + | chr7_1:61470411-61470430 | Msa1028510:CDS | 60.0% | |
| ! | CCTCTGATCAAAGGCGCGTC+CGG | - | chr7_1:61470703-61470722 | None:intergenic | 60.0% |
| GTTGCGTCGGACACCAGACA+TGG | - | chr7_1:61471300-61471319 | None:intergenic | 60.0% | |
| ACGGTGCAGAAGGGCCACAA+TGG | + | chr7_1:61472392-61472411 | Msa1028510:CDS | 60.0% | |
| ! | GATCTGAAGGAAGGCGCAGC+AGG | + | chr7_1:61473833-61473852 | Msa1028510:CDS | 60.0% |
| !! | ACGGTGAGGCATTGCCGCAC+TGG | - | chr7_1:61469979-61469998 | None:intergenic | 65.0% |
| ! | GAGGGAGTGGAGGAGTACGG+CGG | - | chr7_1:61470150-61470169 | None:intergenic | 65.0% |
| GGAGGTAAGCGAGGGAGTGG+AGG | - | chr7_1:61470160-61470179 | None:intergenic | 65.0% | |
| GTGGGAGGTAAGCGAGGGAG+TGG | - | chr7_1:61470163-61470182 | None:intergenic | 65.0% | |
| GGTCAGCAGAGCCAAGGCAG+AGG | - | chr7_1:61470223-61470242 | None:intergenic | 65.0% | |
| CGCAGCGAGGGAGGAATCCA+CGG | - | chr7_1:61470249-61470268 | None:intergenic | 65.0% | |
| CGTGGATTCCTCCCTCGCTG+CGG | + | chr7_1:61470247-61470266 | Msa1028510:CDS | 65.0% | |
| CACTGTGCCGAGGGATGCGA+CGG | + | chr7_1:61470420-61470439 | Msa1028510:CDS | 65.0% | |
| CACGACACCGTCGCATCCCT+CGG | - | chr7_1:61470430-61470449 | None:intergenic | 65.0% | |
| CCGGACGCGCCTTTGATCAG+AGG | + | chr7_1:61470700-61470719 | Msa1028510:intron | 65.0% | |
| GGAGTCCTCATCCCAGCACC+AGG | + | chr7_1:61473780-61473799 | Msa1028510:CDS | 65.0% | |
| GGCCTGCGATCTCTTGCTGC+CGG | + | chr7_1:61474377-61474396 | Msa1028510:CDS | 65.0% | |
| CACCGGCAGCAAGAGATCGC+AGG | - | chr7_1:61474382-61474401 | None:intergenic | 65.0% | |
| CTGCGATCTCTTGCTGCCGG+TGG | + | chr7_1:61474380-61474399 | Msa1028510:CDS | 65.0% | |
| GTGTTCGACGGCTGCGACGC+CGG | - | chr7_1:61470084-61470103 | None:intergenic | 70.0% | |
| ! | GGAGTGGAGGAGTACGGCGG+CGG | - | chr7_1:61470147-61470166 | None:intergenic | 70.0% |
| GGCGCGTGGGAGGTAAGCGA+GGG | - | chr7_1:61470168-61470187 | None:intergenic | 70.0% | |
| GGACCGGAGACGACGCTGAG+CGG | - | chr7_1:61470189-61470208 | None:intergenic | 70.0% | |
| CGAGGGAGGAATCCACGGCG+CGG | - | chr7_1:61470244-61470263 | None:intergenic | 70.0% | |
| TCCTCCCTCGCTGCGGACCT+CGG | + | chr7_1:61470254-61470273 | Msa1028510:CDS | 70.0% | |
| GAGACCGAGGTCCGCAGCGA+GGG | - | chr7_1:61470261-61470280 | None:intergenic | 70.0% | |
| CGTCGCATCCCTCGGCACAG+TGG | - | chr7_1:61470422-61470441 | None:intergenic | 70.0% | |
| ! | CGAGGGATGCGACGGTGTCG+TGG | + | chr7_1:61470428-61470447 | Msa1028510:CDS | 70.0% |
| ! | GTGGAGGAGTACGGCGGCGG+CGG | - | chr7_1:61470144-61470163 | None:intergenic | 75.0% |
| CGGCGCGTGGGAGGTAAGCG+AGG | - | chr7_1:61470169-61470188 | None:intergenic | 75.0% | |
| GACGACGCTGAGCGGCGCGT+GGG | - | chr7_1:61470181-61470200 | None:intergenic | 75.0% | |
| AGACGACGCTGAGCGGCGCG+TGG | - | chr7_1:61470182-61470201 | None:intergenic | 75.0% | |
| GCGCCGCTCAGCGTCGTCTC+CGG | + | chr7_1:61470183-61470202 | Msa1028510:CDS | 75.0% | |
| CGGCGCGGTCAGCAGAGCCA+AGG | - | chr7_1:61470229-61470248 | None:intergenic | 75.0% | |
| ! | TGGCTCTGCTGACCGCGCCG+TGG | + | chr7_1:61470229-61470248 | Msa1028510:CDS | 75.0% |
| ACCGAGGTCCGCAGCGAGGG+AGG | - | chr7_1:61470258-61470277 | None:intergenic | 75.0% | |
| GGAGACCGAGGTCCGCAGCG+AGG | - | chr7_1:61470262-61470281 | None:intergenic | 75.0% | |
| ! | GACGCTGAGCGGCGCGTGGG+AGG | - | chr7_1:61470178-61470197 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 61469865 | 61476118 | 61469865 | ID=Msa1028510;Name=Msa1028510 |
| chr7_1 | mRNA | 61469865 | 61476118 | 61469865 | ID=Msa1028510-mRNA-1;Parent=Msa1028510;Name=Msa1028510-mRNA-1;_AED=0.02;_eAED=0.02;_QI=122|1|1|1|1|1|7|279|617 |
| chr7_1 | exon | 61469865 | 61470550 | 61469865 | ID=Msa1028510-mRNA-1:exon:12935;Parent=Msa1028510-mRNA-1 |
| chr7_1 | exon | 61472039 | 61472192 | 61472039 | ID=Msa1028510-mRNA-1:exon:12936;Parent=Msa1028510-mRNA-1 |
| chr7_1 | exon | 61472296 | 61472426 | 61472296 | ID=Msa1028510-mRNA-1:exon:12937;Parent=Msa1028510-mRNA-1 |
| chr7_1 | exon | 61473490 | 61474248 | 61473490 | ID=Msa1028510-mRNA-1:exon:12938;Parent=Msa1028510-mRNA-1 |
| chr7_1 | exon | 61474368 | 61474415 | 61474368 | ID=Msa1028510-mRNA-1:exon:12939;Parent=Msa1028510-mRNA-1 |
| chr7_1 | exon | 61474886 | 61475002 | 61474886 | ID=Msa1028510-mRNA-1:exon:12940;Parent=Msa1028510-mRNA-1 |
| chr7_1 | exon | 61475759 | 61476118 | 61475759 | ID=Msa1028510-mRNA-1:exon:12941;Parent=Msa1028510-mRNA-1 |
| chr7_1 | five_prime_UTR | 61469865 | 61469986 | 61469865 | ID=Msa1028510-mRNA-1:five_prime_utr;Parent=Msa1028510-mRNA-1 |
| chr7_1 | CDS | 61469987 | 61470550 | 61469987 | ID=Msa1028510-mRNA-1:cds;Parent=Msa1028510-mRNA-1 |
| chr7_1 | CDS | 61472039 | 61472192 | 61472039 | ID=Msa1028510-mRNA-1:cds;Parent=Msa1028510-mRNA-1 |
| chr7_1 | CDS | 61472296 | 61472426 | 61472296 | ID=Msa1028510-mRNA-1:cds;Parent=Msa1028510-mRNA-1 |
| chr7_1 | CDS | 61473490 | 61474248 | 61473490 | ID=Msa1028510-mRNA-1:cds;Parent=Msa1028510-mRNA-1 |
| chr7_1 | CDS | 61474368 | 61474415 | 61474368 | ID=Msa1028510-mRNA-1:cds;Parent=Msa1028510-mRNA-1 |
| chr7_1 | CDS | 61474886 | 61475002 | 61474886 | ID=Msa1028510-mRNA-1:cds;Parent=Msa1028510-mRNA-1 |
| chr7_1 | CDS | 61475759 | 61475839 | 61475759 | ID=Msa1028510-mRNA-1:cds;Parent=Msa1028510-mRNA-1 |
| chr7_1 | three_prime_UTR | 61475840 | 61476118 | 61475840 | ID=Msa1028510-mRNA-1:three_prime_utr;Parent=Msa1028510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
