AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0108410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0108410 MtrunA17_Chr1g0164931 96.923 1170 35 1 3 1171 1 1170 0.0 2352
Msa0108410 MtrunA17_Chr1g0212011 82.923 1177 194 4 1 1171 1 1176 0.0 2013
Msa0108410 MtrunA17_Chr2g0318501 54.996 1171 461 14 41 1167 52 1200 0.0 1222
Msa0108410 MtrunA17_Chr8g0360791 54.144 1086 446 12 114 1169 114 1177 0.0 1134
Msa0108410 MtrunA17_Chr1g0151061 44.417 824 417 16 135 937 18 821 0.0 666
Msa0108410 MtrunA17_Chr3g0136341 43.468 842 428 16 121 937 4 822 0.0 655
Msa0108410 MtrunA17_Chr4g0070771 44.082 828 427 16 127 936 14 823 0.0 646
Msa0108410 MtrunA17_Chr1g0183001 39.621 949 512 21 116 1025 6 932 0.0 636
Msa0108410 MtrunA17_Chr2g0309291 41.496 829 450 15 125 936 12 822 0.0 629
Msa0108410 MtrunA17_Chr1g0190471 42.163 823 441 15 127 932 14 818 0.0 627
Msa0108410 MtrunA17_Chr7g0262581 39.103 936 515 19 127 1025 14 931 0.0 624
Msa0108410 MtrunA17_Chr1g0184391 41.247 834 447 16 127 938 14 826 0.0 613
Msa0108410 MtrunA17_Chr1g0184601 41.106 832 447 16 127 937 16 825 0.0 607
Msa0108410 MtrunA17_Chr7g0274361 36.898 935 502 21 127 1028 60 939 3.60e-179 553
Msa0108410 MtrunA17_Chr1g0164271 40.881 477 260 9 465 936 45 504 4.71e-101 344
Msa0108410 MtrunA17_Chr1g0164291 47.727 264 128 5 127 381 26 288 6.97e-73 244
Msa0108410 MtrunA17_Chr6g0450651 65.385 52 18 0 181 232 6 57 5.07e-21 87.8
Msa0108410 MtrunA17_Chr1g0164281 42.466 73 40 1 369 439 2 74 1.51e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0108410 AT3G19960.1 75.956 1177 261 10 3 1169 1 1165 0.0 1823
Msa0108410 AT3G19960.4 75.956 1177 261 10 3 1169 1 1165 0.0 1823
Msa0108410 AT3G19960.5 75.956 1177 261 10 3 1169 1 1165 0.0 1823
Msa0108410 AT1G50360.1 73.850 1174 278 8 3 1169 1 1152 0.0 1771
Msa0108410 AT3G19960.2 71.311 1213 264 15 3 1169 1 1175 0.0 1704
Msa0108410 AT3G19960.3 77.551 882 186 5 3 881 1 873 0.0 1412
Msa0108410 AT5G54280.2 55.484 1094 428 10 109 1165 148 1219 0.0 1217
Msa0108410 AT5G54280.1 56.137 1051 401 11 152 1165 2 1029 0.0 1172
Msa0108410 AT4G27370.2 53.974 1082 436 13 106 1166 95 1135 0.0 1130
Msa0108410 AT4G27370.3 53.974 1082 436 13 106 1166 95 1135 0.0 1130
Msa0108410 AT4G27370.4 53.697 1082 439 13 106 1166 95 1135 0.0 1126
Msa0108410 AT4G27370.1 53.519 1080 442 12 106 1166 95 1133 0.0 1119
Msa0108410 AT5G43900.1 42.377 833 435 17 127 937 14 823 0.0 647
Msa0108410 AT5G43900.3 42.377 833 435 17 127 937 74 883 0.0 646
Msa0108410 AT5G43900.2 42.410 830 436 17 127 937 74 880 0.0 641
Msa0108410 AT1G04600.1 41.908 828 444 16 127 936 14 822 0.0 639
Msa0108410 AT1G54560.2 39.537 951 503 20 127 1032 14 937 0.0 639
Msa0108410 AT1G54560.1 39.537 951 503 20 127 1032 17 940 0.0 639
Msa0108410 AT1G08730.2 39.496 952 502 20 127 1032 14 937 0.0 638
Msa0108410 AT1G08730.1 39.496 952 502 20 127 1032 22 945 0.0 638
Msa0108410 AT2G33240.2 41.566 830 448 16 125 936 11 821 0.0 636
Msa0108410 AT2G33240.6 41.183 845 458 17 112 936 19 844 0.0 636
Msa0108410 AT2G33240.4 41.183 845 458 17 112 936 14 839 0.0 636
Msa0108410 AT2G33240.3 41.183 845 458 17 112 936 14 839 0.0 635
Msa0108410 AT1G17580.1 43.220 826 435 14 127 936 13 820 0.0 635
Msa0108410 AT2G33240.1 41.183 845 458 17 112 936 14 839 0.0 635
Msa0108410 AT2G33240.8 41.183 845 458 17 112 936 14 839 0.0 635
Msa0108410 AT2G33240.7 41.183 845 458 17 112 936 14 839 0.0 635
Msa0108410 AT4G33200.4 42.169 830 433 15 127 932 18 824 0.0 632
Msa0108410 AT4G33200.1 42.169 830 433 15 127 932 18 824 0.0 632
Msa0108410 AT4G33200.3 42.169 830 433 15 127 932 18 824 0.0 631
Msa0108410 AT4G33200.2 42.169 830 433 15 127 932 18 824 0.0 631
Msa0108410 AT1G04160.1 39.657 933 508 22 127 1030 14 920 0.0 631
Msa0108410 AT1G04160.2 39.657 933 508 22 127 1030 14 920 0.0 631
Msa0108410 AT4G28710.1 41.136 880 461 20 127 977 13 864 0.0 629
Msa0108410 AT2G31900.2 38.503 935 522 19 127 1026 14 930 0.0 626
Msa0108410 AT2G31900.4 38.503 935 522 19 127 1026 14 930 0.0 626
Msa0108410 AT2G31900.1 38.503 935 522 19 127 1026 14 930 0.0 626
Msa0108410 AT2G20290.4 41.667 828 444 18 127 936 13 819 0.0 625
Msa0108410 AT2G20290.3 41.667 828 444 18 127 936 13 819 0.0 624
Msa0108410 AT2G20290.1 41.667 828 444 18 127 936 24 830 0.0 624
Msa0108410 AT2G20290.2 41.667 828 444 18 127 936 13 819 0.0 624
Msa0108410 AT5G20490.2 38.787 923 517 19 127 1024 14 913 0.0 622
Msa0108410 AT5G20490.1 38.787 923 517 19 127 1024 13 912 0.0 621
Msa0108410 AT5G20490.3 39.977 873 471 18 179 1024 1 847 0.0 606
Msa0108410 AT3G58160.5 38.284 909 505 19 127 1002 12 897 0.0 592
Msa0108410 AT3G58160.1 38.284 909 505 19 127 1002 12 897 0.0 592
Msa0108410 AT3G58160.2 38.284 909 505 19 127 1002 12 897 0.0 592
Msa0108410 AT3G58160.3 38.284 909 505 19 127 1002 12 897 0.0 590
Msa0108410 AT3G58160.4 38.284 909 505 19 127 1002 12 897 0.0 590
Msa0108410 AT2G31900.5 39.146 820 450 16 238 1026 14 815 5.52e-178 562
Msa0108410 AT2G31900.3 35.559 689 400 15 364 1026 2 672 6.45e-119 399
Msa0108410 AT1G42680.1 97.436 78 2 0 264 341 56 133 5.77e-44 157
Msa0108410 AT2G33240.5 33.436 326 197 7 616 936 2 312 3.43e-42 169

Find 268 sgRNAs with CRISPR-Local

Find 863 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTAAGATACTGATATTTA+TGG 0.091130 1_3:-19914564 Msa0108410:three_prime_UTR
ATCTTGTTCCGTTGCTTTCT+TGG 0.132641 1_3:+19915338 None:intergenic
AGTGCATTGCCAACAAAATA+TGG 0.209322 1_3:-19914953 Msa0108410:three_prime_UTR
GTGGCAGAGTGAGTTATTTA+AGG 0.217787 1_3:-19927895 Msa0108410:intron
AATCAGTTTCAGTGTCTTCT+AGG 0.239339 1_3:-19927567 Msa0108410:CDS
TTCAGGCGATTGGAGATTAT+TGG 0.242438 1_3:+19917570 None:intergenic
ATATGATACAACTGGGTTTC+TGG 0.249338 1_3:-19918276 Msa0108410:CDS
TTCTCCTTTGAAACATGATT+TGG 0.249836 1_3:+19918535 None:intergenic
AGCAATTGTTATTCAATTAC+TGG 0.252497 1_3:-19921454 Msa0108410:CDS
TATCTATTCATGCAGTTATT+CGG 0.260684 1_3:-19916865 Msa0108410:intron
TAATCTAGTAAGAAACTTAT+TGG 0.260754 1_3:-19914601 Msa0108410:three_prime_UTR
CTATGTTAGCTGCAGTATTA+TGG 0.266925 1_3:-19921214 Msa0108410:CDS
ATCTATTCATGCAGTTATTC+GGG 0.269813 1_3:-19916864 Msa0108410:intron
AGTCCTTGTTCATACGTTTC+AGG 0.295953 1_3:+19917553 None:intergenic
TTGTTGCAACACTTAGCTTT+TGG 0.298783 1_3:+19918105 None:intergenic
TTACCAAAGGCTTCAAGAAT+TGG 0.300704 1_3:+19924508 None:intergenic
GACAAAAGCGGGGCCTGTTT+TGG 0.304716 1_3:-19925333 Msa0108410:CDS
TAAATGCTGTTTAAGCTTGT+TGG 0.305362 1_3:+19918562 None:intergenic
AGCTACTCTTTGCAGTCATT+CGG 0.305391 1_3:-19915894 Msa0108410:intron
TTCAACTTCCAAATGGGAAT+TGG 0.305917 1_3:-19925744 Msa0108410:CDS
GAGCAAAGGAGTCAAGTATT+TGG 0.309721 1_3:-19915268 Msa0108410:CDS
GAGATTCACTTCAGCGAAAC+TGG 0.313131 1_3:-19924315 Msa0108410:CDS
AATGTCAAATCTGTACCATT+TGG 0.323838 1_3:+19918587 None:intergenic
TATACCTTCTGGCGAACTTT+TGG 0.329124 1_3:+19917449 None:intergenic
ACGTGTCCAAAGTTGCTTTA+GGG 0.333334 1_3:-19917025 Msa0108410:CDS
CCTGTGATTGTGTCAACTTT+TGG 0.335642 1_3:+19920293 None:intergenic
GCTACTCTTTGCAGTCATTC+GGG 0.335669 1_3:-19915893 Msa0108410:intron
CTGGGTTTCTGGAGAAGAAT+AGG 0.339086 1_3:-19918265 Msa0108410:CDS
TCTGGTCAAGTCATCTTTCC+TGG 0.344259 1_3:-19915656 Msa0108410:CDS
AGAAGATGCTCAGGAGATAT+TGG 0.350589 1_3:-19915859 Msa0108410:CDS
TATATTCATGCCTGTTTGAT+TGG 0.357775 1_3:-19920036 Msa0108410:CDS
TTGATCGCTTCAACTTTCAT+TGG 0.359850 1_3:-19928777 Msa0108410:five_prime_UTR
TACGTGTCCAAAGTTGCTTT+AGG 0.363056 1_3:-19917026 Msa0108410:CDS
GAAAATGAGGAAAATATAAT+AGG 0.363190 1_3:-19914930 Msa0108410:three_prime_UTR
TTCAGTTGCTTTACGCTTGT+AGG 0.365389 1_3:+19925256 None:intergenic
AATCCAATTCTTGAAGCCTT+TGG 0.369019 1_3:-19924511 Msa0108410:CDS
TCAGGCGATTGGAGATTATT+GGG 0.371884 1_3:+19917571 None:intergenic
AAAAGTGAAACAAGACTGTT+TGG 0.373096 1_3:-19925557 Msa0108410:CDS
GCTGAGGTGCTGTGGGGTGC+TGG 0.377030 1_3:-19917518 Msa0108410:CDS
CAACTTTCATTGGAGAATCT+AGG 0.377797 1_3:-19928767 Msa0108410:intron
TTAGCTGCAGTATTATGGTT+AGG 0.378135 1_3:-19921209 Msa0108410:CDS
ATCAGTATTCTAGATATATA+TGG 0.381169 1_3:-19919956 Msa0108410:CDS
ACAAGAAATCGTACCCTTCA+TGG 0.383555 1_3:-19917054 Msa0108410:CDS
ACCATCTGTTCTCGTATTGT+TGG 0.384079 1_3:+19915551 None:intergenic
GCAAATCCTGATATTCTTGA+TGG 0.386036 1_3:-19925529 Msa0108410:CDS
TCCACTCCATCAAGAATATC+AGG 0.388008 1_3:+19925523 None:intergenic
ATGCAGTACTTGGCGGCTCT+TGG 0.391998 1_3:-19924571 Msa0108410:CDS
TTCATGCCTGTTTGATTGGT+TGG 0.393840 1_3:-19920032 Msa0108410:CDS
TTCTTAGTTGAAGTGAAATC+TGG 0.394646 1_3:-19915232 Msa0108410:CDS
TCAACTTCCAAATGGGAATT+GGG 0.395732 1_3:-19925743 Msa0108410:CDS
TTCAAGAAAGTTCCTCTGTA+TGG 0.397705 1_3:-19925296 Msa0108410:CDS
TAGGTCACATATGATACAAC+TGG 0.398041 1_3:-19918284 Msa0108410:CDS
ATGTCAAATCTGTACCATTT+GGG 0.402494 1_3:+19918588 None:intergenic
AACAGAGTCGGATGAGATTC+TGG 0.404107 1_3:-19915674 Msa0108410:CDS
GGATTTACAGCAACCAAAAC+AGG 0.405144 1_3:+19925320 None:intergenic
AGTACCTTCTTTGAAACATA+AGG 0.407016 1_3:+19927520 None:intergenic
CAGTGTCTTCTAGGGAATCT+AGG 0.407646 1_3:-19927558 Msa0108410:CDS
AGTTACCTCGTATCATTTCT+CGG 0.410198 1_3:+19925198 None:intergenic
TTAATCAGTCTATAATTATA+AGG 0.413289 1_3:-19925059 Msa0108410:intron
GTGCTGTGGGGTGCTGGAAG+TGG 0.413556 1_3:-19917512 Msa0108410:CDS
GAAGCTTGGAAAAGGGATTA+CGG 0.413997 1_3:-19915151 Msa0108410:CDS
ATCTGTACCATTTGGGAAAG+TGG 0.415363 1_3:+19918595 None:intergenic
AAATGTTTGAAGCTTGGAAA+AGG 0.416491 1_3:-19915159 Msa0108410:CDS
TCCTGGCTGAATTGCAGCGC+CGG 0.418583 1_3:-19915639 Msa0108410:CDS
AAGCTTGGAAAAGGGATTAC+GGG 0.418662 1_3:-19915150 Msa0108410:CDS
AGCCTTCTAAGTTCTTGATC+AGG 0.418771 1_3:+19915187 None:intergenic
TATATATTTGCAGAGACCAC+TGG 0.419647 1_3:-19918645 Msa0108410:intron
CTTGGTTTCAACTTCCAAAT+GGG 0.424814 1_3:-19925750 Msa0108410:CDS
AATTGATGCAAGAGATGCTT+TGG 0.427800 1_3:-19920068 Msa0108410:CDS
ATTTATCTTACCTTCCCATC+TGG 0.428801 1_3:+19925670 None:intergenic
TCAACTCGCAAAATGAAAGT+TGG 0.434007 1_3:-19920331 Msa0108410:CDS
CTTGATCTTCTTTACTGATG+TGG 0.434607 1_3:+19921249 None:intergenic
ATTGTTGGATACGTTGGTTA+AGG 0.437011 1_3:+19915566 None:intergenic
TTTCTCTCTCAGAGCAGCTT+CGG 0.438499 1_3:+19915606 None:intergenic
GTATGGAATCCAAGTGCAAC+AGG 0.441521 1_3:+19918240 None:intergenic
GCGGCTCTTGGAGGTGGAAG+TGG 0.443549 1_3:-19924559 Msa0108410:CDS
TTCAGTGGTGAGAGTGGAGC+TGG 0.443781 1_3:-19924619 Msa0108410:intron
ATCCTGATCAAGAACTTAGA+AGG 0.445978 1_3:-19915189 Msa0108410:CDS
GGTAACCCCTAAAGCAACTT+TGG 0.446364 1_3:+19917019 None:intergenic
CAGTACTTGGCGGCTCTTGG+AGG 0.447395 1_3:-19924568 Msa0108410:CDS
TTCTCAATTTACCGTCTCCA+TGG 0.447527 1_3:+19927767 None:intergenic
ATTGCAGCGCCGGGTACTTA+AGG 0.449090 1_3:-19915629 Msa0108410:CDS
ATCTATTGTTGATGAAGGCT+TGG 0.449910 1_3:-19927611 Msa0108410:CDS
TAAAACAAATGTTTGAAGCT+TGG 0.451545 1_3:-19915165 Msa0108410:CDS
GGTAAAAGAATACGACGTAT+AGG 0.452168 1_3:-19914904 Msa0108410:three_prime_UTR
CAACTCGCAAAATGAAAGTT+GGG 0.454859 1_3:-19920330 Msa0108410:CDS
TCTTGGTTTCAACTTCCAAA+TGG 0.455482 1_3:-19925751 Msa0108410:CDS
GCCAACTCCCAATTCCCATT+TGG 0.456747 1_3:+19925736 None:intergenic
GTTCATACGTTTCAGGCGAT+TGG 0.459394 1_3:+19917560 None:intergenic
TAGCTGCAGTATTATGGTTA+GGG 0.459795 1_3:-19921208 Msa0108410:CDS
CCAGGAGGCAACGATTTGAT+AGG 0.462551 1_3:+19927832 None:intergenic
AATCTGTATTATTAGAAGAC+AGG 0.463246 1_3:-19927636 Msa0108410:CDS
TCAAGATCGTGCCGGTGTCA+TGG 0.464098 1_3:-19927692 Msa0108410:CDS
TACTTGGCGGCTCTTGGAGG+TGG 0.466458 1_3:-19924565 Msa0108410:CDS
TTTCAGGAATATATTCAAGA+TGG 0.467069 1_3:-19919598 Msa0108410:intron
TCCTTCTTGAAGCTTCTTGA+GGG 0.467984 1_3:+19916984 None:intergenic
TAGAAGACACTGAAACTGAT+TGG 0.470002 1_3:+19927569 None:intergenic
ATGGTAGTAAGAAACAGAAC+AGG 0.470194 1_3:-19916761 Msa0108410:CDS
AACGTCACAGCCAATCAATT+CGG 0.471149 1_3:+19920375 None:intergenic
CCTTGATAATGCTGCATCAC+AGG 0.473663 1_3:-19917287 Msa0108410:CDS
AATGTTTGAAGCTTGGAAAA+GGG 0.475464 1_3:-19915158 Msa0108410:CDS
AACACCTTATGTTTCAAAGA+AGG 0.476863 1_3:-19927524 Msa0108410:intron
GCGATGAGCGTGATTACAGC+TGG 0.477040 1_3:-19915384 Msa0108410:CDS
TAATCTGACCCGTGATGTAA+TGG 0.477375 1_3:-19927794 Msa0108410:CDS
GCTACAGTTGTCATACAATC+AGG 0.478266 1_3:-19916725 Msa0108410:intron
TATTTCAGAAACTCCAGTCT+TGG 0.480465 1_3:-19925768 Msa0108410:intron
AAGTGGACTCTTCATCTAGC+AGG 0.481741 1_3:+19918612 None:intergenic
AAAGATAGCAATGCAGTACT+TGG 0.482937 1_3:-19924581 Msa0108410:CDS
ATATGAGCTGCAAATATTTG+AGG 0.483719 1_3:+19918188 None:intergenic
TTTCTGCCACACGTCTTCCA+TGG 0.484178 1_3:+19915504 None:intergenic
TTTCACTTCAACTAAGAACT+TGG 0.484832 1_3:+19915237 None:intergenic
AACTGTGAAAACAGAGATGA+AGG 0.488470 1_3:+19928855 None:intergenic
GCACGAGGATAGAAGTTGTA+TGG 0.488840 1_3:+19918223 None:intergenic
GAATAGGGACCTGTTGCACT+TGG 0.490624 1_3:-19918249 Msa0108410:CDS
TGCAGTCATTCGGGGATGGT+TGG 0.490822 1_3:-19915884 Msa0108410:intron
TAGAATACTGATTGATCTGC+CGG 0.491707 1_3:+19919967 None:intergenic
AATTCCAAATCATGTTTCAA+AGG 0.492600 1_3:-19918539 Msa0108410:CDS
AAGTGTTGCAACAAAATTCA+AGG 0.492608 1_3:-19918096 Msa0108410:intron
TTTACTGTGTGTCATTATGC+TGG 0.494386 1_3:-19918500 Msa0108410:CDS
AGGGAATCTATTGTTGATGA+AGG 0.495058 1_3:-19927616 Msa0108410:CDS
TTACATGTCGCCGAATTGAT+TGG 0.496421 1_3:-19920385 Msa0108410:CDS
TGTGCAAATCAGACAAAAGC+GGG 0.497041 1_3:-19925344 Msa0108410:intron
AGACATTCTTGTTGGAAAGC+CGG 0.497595 1_3:+19917474 None:intergenic
CCTATCAAATCGTTGCCTCC+TGG 0.499078 1_3:-19927832 Msa0108410:CDS
GTTGGTCCTTTACACAAGTC+AGG 0.499327 1_3:-19918140 Msa0108410:CDS
AAATTGAGAAGCAGTGTGGC+TGG 0.499595 1_3:-19927754 Msa0108410:CDS
GCTCAACCAACCAATCAAAC+AGG 0.499636 1_3:+19920026 None:intergenic
GAAGAGTCCACTTTCCCAAA+TGG 0.499735 1_3:-19918602 Msa0108410:CDS
CAAGATCGTGCCGGTGTCAT+GGG 0.501300 1_3:-19927691 Msa0108410:CDS
TTCCTTCTTGAAGCTTCTTG+AGG 0.501411 1_3:+19916983 None:intergenic
AATGAGGACATAGCGTATAG+TGG 0.502355 1_3:-19927661 Msa0108410:CDS
CCTGGCTGAATTGCAGCGCC+GGG 0.504834 1_3:-19915638 Msa0108410:CDS
AAGTTGATTATAAATAAACT+TGG 0.508975 1_3:-19915109 Msa0108410:CDS
CAACAAAATATGGGAAAATG+AGG 0.510692 1_3:-19914943 Msa0108410:three_prime_UTR
ACCTCGTATCATTTCTCGGA+TGG 0.512201 1_3:+19925202 None:intergenic
GTGCATTGCCAACAAAATAT+GGG 0.512583 1_3:-19914952 Msa0108410:three_prime_UTR
GCTGTTGGCAAAAGACGAAC+CGG 0.513126 1_3:-19919986 Msa0108410:CDS
TGGGTTTCTGGAGAAGAATA+GGG 0.514065 1_3:-19918264 Msa0108410:CDS
ATCAGTTTCAGTGTCTTCTA+GGG 0.514515 1_3:-19927566 Msa0108410:CDS
ATAAATAAATCACTTGCTGT+TGG 0.514598 1_3:-19920001 Msa0108410:CDS
TCTTTGCAGTCATTCGGGGA+TGG 0.516373 1_3:-19915888 Msa0108410:intron
CTTATTCAAGTTAGAACAAG+AGG 0.518557 1_3:-19919739 Msa0108410:intron
TCCAAATGGGAATTGGGAGT+TGG 0.519820 1_3:-19925737 Msa0108410:CDS
TGTTCAAGCTGTTGAAAATG+AGG 0.520400 1_3:-19921150 Msa0108410:CDS
CAGCTTCGGCCTTAAGTACC+CGG 0.521216 1_3:+19915620 None:intergenic
TACAGAGGAACTTTCTTGAA+AGG 0.523489 1_3:+19925299 None:intergenic
TTGTGTAAAGGACCAACTAC+TGG 0.524092 1_3:+19918146 None:intergenic
ATATTCAAGATGGAATTGAC+TGG 0.524979 1_3:-19919588 Msa0108410:CDS
TTGGAAGTTGAAACCAAGAC+TGG 0.525942 1_3:+19925755 None:intergenic
AGCAAGGCTCTTCTTAGCAA+TGG 0.526141 1_3:+19915453 None:intergenic
TACAACAGCTGAGGTGCTGT+GGG 0.526882 1_3:-19917525 Msa0108410:CDS
TCTCAATTTACCGTCTCCAT+GGG 0.527570 1_3:+19927768 None:intergenic
TCTCGTATTGTTGGATACGT+TGG 0.528437 1_3:+19915560 None:intergenic
CGTGTCCAAAGTTGCTTTAG+GGG 0.528549 1_3:-19917024 Msa0108410:CDS
GTGGTTCGAATATCAAGATC+CGG 0.531183 1_3:-19917493 Msa0108410:CDS
AGACACTGAAACTGATTGGA+AGG 0.532173 1_3:+19927573 None:intergenic
TAGCCAACTTGAAACATCTC+AGG 0.533991 1_3:+19917217 None:intergenic
TGGTTGGTCAGAAGATGCTC+AGG 0.535026 1_3:-19915868 Msa0108410:CDS
ATGGGTTTCCATTACATCAC+GGG 0.535138 1_3:+19927786 None:intergenic
CTAGTTTGAGCGTTATAAGT+CGG 0.536731 1_3:-19915306 Msa0108410:CDS
ATATATTTGCAGAGACCACT+GGG 0.539336 1_3:-19918644 Msa0108410:intron
ACATAGCTAGCAGGCGTGGT+TGG 0.539989 1_3:-19929036 Msa0108410:five_prime_UTR
CCCGGCGCTGCAATTCAGCC+AGG 0.542018 1_3:+19915638 None:intergenic
CCTGTGATGCAGCATTATCA+AGG 0.543949 1_3:+19917287 None:intergenic
AGAGTAGTTCAATGCAATGA+AGG 0.545560 1_3:-19924021 Msa0108410:CDS
TATTTCATTGCCAGATGGGA+AGG 0.546517 1_3:-19925680 Msa0108410:intron
ATTGAAACTGAAACACTAAG+TGG 0.546717 1_3:+19917262 None:intergenic
GCCCCACCTGACTTGTGTAA+AGG 0.546790 1_3:+19918134 None:intergenic
GCGTGATTACAGCTGGGATG+TGG 0.546814 1_3:-19915377 Msa0108410:CDS
CTGTTATTTCATTGCCAGAT+GGG 0.546839 1_3:-19925684 Msa0108410:CDS
GGAAAAGGGATTACGGGGCA+AGG 0.546904 1_3:-19915144 Msa0108410:CDS
AGCATAATGACACACAGTAA+AGG 0.547082 1_3:+19918502 None:intergenic
GATAGCAATGCAGTACTTGG+CGG 0.550193 1_3:-19924578 Msa0108410:CDS
TCTTGAGGGAACGACGAGCT+TGG 0.550989 1_3:+19916998 None:intergenic
GAGTAGTTCAATGCAATGAA+GGG 0.551191 1_3:-19924020 Msa0108410:CDS
AGACAATGGTAAAGAATGAA+AGG 0.552635 1_3:+19928937 None:intergenic
CGAGTTGAAGATGAAATCCA+TGG 0.558151 1_3:-19915521 Msa0108410:CDS
TGAGGAAAATATAATAGGAA+AGG 0.562814 1_3:-19914925 Msa0108410:three_prime_UTR
TCTCTAAGCGTTGCATCAGT+TGG 0.563355 1_3:+19917626 None:intergenic
GGACACGTAAGATGCCATGA+AGG 0.564278 1_3:+19917040 None:intergenic
CATGGGTTTCCATTACATCA+CGG 0.564873 1_3:+19927785 None:intergenic
TCGAAGAGATGGTGGTGCAC+CGG 0.565003 1_3:+19923963 None:intergenic
GAGGCAACGATTTGATAGGC+TGG 0.565658 1_3:+19927836 None:intergenic
CAGTAATTACCTCGAAGAGA+TGG 0.565865 1_3:+19923952 None:intergenic
CTACAACAGCTGAGGTGCTG+TGG 0.566317 1_3:-19917526 Msa0108410:CDS
TTGCCTGAGATGTTTCAAGT+TGG 0.567249 1_3:-19917220 Msa0108410:CDS
GTCCTTTACACAAGTCAGGT+GGG 0.568422 1_3:-19918136 Msa0108410:CDS
TTCGAAACACGGGGACATGA+AGG 0.569787 1_3:-19915833 Msa0108410:intron
GAAACAAGACTGTTTGGTAT+CGG 0.570221 1_3:-19925551 Msa0108410:CDS
TCCTGATATTCTTGATGGAG+TGG 0.572931 1_3:-19925524 Msa0108410:CDS
ATCTGTATTATTAGAAGACA+GGG 0.577757 1_3:-19927635 Msa0108410:CDS
GAAACTGATTGGAAGGGGAG+TGG 0.578951 1_3:+19927580 None:intergenic
AGAAGAATTTCGCATGGTCA+TGG 0.580477 1_3:-19921419 Msa0108410:intron
TCCCTCAAGAAGCTTCAAGA+AGG 0.582589 1_3:-19916985 Msa0108410:CDS
TTCAATGCAATGAAGGGGAA+AGG 0.582691 1_3:-19924014 Msa0108410:CDS
CAGTCTGAAAAGCCAGTAGT+TGG 0.583375 1_3:-19918158 Msa0108410:CDS
TCTGTTATTTCATTGCCAGA+TGG 0.583506 1_3:-19925685 Msa0108410:CDS
GACACTGAAACTGATTGGAA+GGG 0.584139 1_3:+19927574 None:intergenic
AATGACACACAGTAAAGGCT+TGG 0.584534 1_3:+19918507 None:intergenic
AGTTGATTATAAATAAACTT+GGG 0.588582 1_3:-19915108 Msa0108410:CDS
TCCTTTACACAAGTCAGGTG+GGG 0.589962 1_3:-19918135 Msa0108410:CDS
TCGGGGACAGAAAACGAGAA+AGG 0.591397 1_3:-19916846 Msa0108410:CDS
TCCAACAATACGAGAACAGA+TGG 0.591982 1_3:-19915552 Msa0108410:CDS
ACACTGAAACTGATTGGAAG+GGG 0.593636 1_3:+19927575 None:intergenic
TACGTATTCAGTGGTGAGAG+TGG 0.594293 1_3:-19924625 Msa0108410:intron
GGTGCACCACCATCTCTTCG+AGG 0.597050 1_3:-19923961 Msa0108410:intron
GGGATGTGGGAAGTAATCAC+AGG 0.597514 1_3:-19915363 Msa0108410:CDS
TTAAATAACTAAGTTGCATG+AGG 0.599721 1_3:+19925497 None:intergenic
CTCACCAAAAGTTCGCCAGA+AGG 0.601748 1_3:-19917453 Msa0108410:intron
GGTCCTTTACACAAGTCAGG+TGG 0.602904 1_3:-19918137 Msa0108410:CDS
GTTCAAGCTGTTGAAAATGA+GGG 0.603640 1_3:-19921149 Msa0108410:intron
AAGAGCTATAATGCAAAACT+TGG 0.603907 1_3:-19914688 Msa0108410:three_prime_UTR
ATCTTACAATAACTTCTACA+TGG 0.604048 1_3:+19914578 None:intergenic
CTACTCTTTGCAGTCATTCG+GGG 0.606699 1_3:-19915892 Msa0108410:intron
CCAAAAGTTGACACAATCAC+AGG 0.607424 1_3:-19920293 Msa0108410:intron
TGAAACATGACATAGCTAGC+AGG 0.607468 1_3:-19929045 Msa0108410:five_prime_UTR
GGGGAAGAAGGAATAGTACA+AGG 0.612062 1_3:-19915045 Msa0108410:CDS
CATGACATAGCTAGCAGGCG+TGG 0.612251 1_3:-19929040 Msa0108410:five_prime_UTR
CTGCTATTATTATACAGAAG+CGG 0.612850 1_3:-19916793 Msa0108410:CDS
AGTGGACTCTTCATCTAGCA+GGG 0.615512 1_3:+19918613 None:intergenic
GATTTGATAGGCTGGAGAGA+AGG 0.616126 1_3:+19927844 None:intergenic
CGTGATTACAGCTGGGATGT+GGG 0.618545 1_3:-19915376 Msa0108410:CDS
GGCTCTTCTTAGCAATGGAG+AGG 0.619567 1_3:+19915458 None:intergenic
TTACCGTTAACCTTAAAACC+AGG 0.620105 1_3:+19927814 None:intergenic
GAAGAAGCTCAAGATCGTGC+CGG 0.620942 1_3:-19927700 Msa0108410:CDS
TGCTCTGAGAGAGAAAGATG+AGG 0.621017 1_3:-19915599 Msa0108410:CDS
TGTAAATCGTATAAAACTGA+CGG 0.621432 1_3:+19925469 None:intergenic
CTGTAATTGCATATACATGA+GGG 0.622923 1_3:+19925231 None:intergenic
TTGCTGAAGAATTTGAGCAA+AGG 0.623033 1_3:-19915282 Msa0108410:CDS
CGATGAGCGTGATTACAGCT+GGG 0.623055 1_3:-19915383 Msa0108410:CDS
GTAATGGAAACCCATGGAGA+CGG 0.624776 1_3:-19927778 Msa0108410:CDS
AGTAGTTCAATGCAATGAAG+GGG 0.626214 1_3:-19924019 Msa0108410:CDS
TGTCAGAGTCATCAATAGCA+AGG 0.628036 1_3:+19915437 None:intergenic
TATTCAAGATGGAATTGACT+GGG 0.628702 1_3:-19919587 Msa0108410:CDS
TCTATTCATGCAGTTATTCG+GGG 0.631165 1_3:-19916863 Msa0108410:intron
TAATTACCTCGAAGAGATGG+TGG 0.631286 1_3:+19923955 None:intergenic
CGTGATGTAATGGAAACCCA+TGG 0.636259 1_3:-19927784 Msa0108410:CDS
ACAGAAGCGGACAAAAGCAA+TGG 0.637000 1_3:-19916780 Msa0108410:CDS
TGATGCAGAAGAATTTCGCA+TGG 0.639444 1_3:-19921425 Msa0108410:CDS
CTGTGCAAATCAGACAAAAG+CGG 0.640116 1_3:-19925345 Msa0108410:intron
TCAGTGGTGAGAGTGGAGCT+GGG 0.640986 1_3:-19924618 Msa0108410:intron
GACACGTAAGATGCCATGAA+GGG 0.641002 1_3:+19917041 None:intergenic
TCCGAAACAGACAACAGAGT+CGG 0.642886 1_3:-19915686 Msa0108410:intron
ATTGAAAAGACCCATGACAC+CGG 0.644299 1_3:+19927681 None:intergenic
GACTTGTACTACAACAGCTG+AGG 0.656329 1_3:-19917534 Msa0108410:CDS
CACAGGCGCCAAGAAAGCAA+CGG 0.657225 1_3:-19915346 Msa0108410:CDS
TCGCCTGAAACGTATGAACA+AGG 0.658265 1_3:-19917556 Msa0108410:CDS
AGGTCACATATGATACAACT+GGG 0.659583 1_3:-19918283 Msa0108410:CDS
TGGTTGAATAACTTCGTCCG+TGG 0.660415 1_3:+19914875 None:intergenic
TCTGTAATTGCATATACATG+AGG 0.661222 1_3:+19925230 None:intergenic
TGAAATCCATGGAAGACGTG+TGG 0.664043 1_3:-19915510 Msa0108410:CDS
AGCTTGGAAAAGGGATTACG+GGG 0.665414 1_3:-19915149 Msa0108410:CDS
AGGAAGATGACATGTGCACG+AGG 0.674742 1_3:+19918208 None:intergenic
TTAATGCAGCGAATAAAATG+TGG 0.676394 1_3:+19917595 None:intergenic
TGTGTGTCATTATGCTGGAG+AGG 0.679978 1_3:-19918495 Msa0108410:intron
ATATAATTGTTACCATACAG+AGG 0.680675 1_3:+19925284 None:intergenic
GAAAACAGAGATGAAGGTGA+TGG 0.682017 1_3:+19928861 None:intergenic
CGGTAAATTGAGAAGCAGTG+TGG 0.683655 1_3:-19927758 Msa0108410:CDS
CCGTTAACCTTAAAACCAGG+AGG 0.697910 1_3:+19927817 None:intergenic
AGCAGGGATAATAACCCCAG+TGG 0.717893 1_3:+19918629 None:intergenic
TGTCTTCTAGGGAATCTAGG+TGG 0.726506 1_3:-19927555 Msa0108410:CDS
GTGCAAATCAGACAAAAGCG+GGG 0.734775 1_3:-19925343 Msa0108410:intron
GCCATCCGAGAAATGATACG+AGG 0.739270 1_3:-19925203 Msa0108410:intron
TAGCAAAACTAACACAACAG+TGG 0.744847 1_3:+19914855 None:intergenic
CGACGTATAGGAAAAGTCCA+CGG 0.746272 1_3:-19914892 Msa0108410:three_prime_UTR
TGGTAGTAAGAAACAGAACA+GGG 0.749156 1_3:-19916760 Msa0108410:CDS
ACAACAGCTGAGGTGCTGTG+GGG 0.756579 1_3:-19917524 Msa0108410:CDS
TATATTTGCAGAGACCACTG+GGG 0.793889 1_3:-19918643 Msa0108410:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATTAAAAATAAATAT+TGG + chr1_3:19921618-19921637 None:intergenic 0.0%
!! TAAAATTCCAATTAAAAAAA+TGG + chr1_3:19916183-19916202 None:intergenic 10.0%
!! GATTTATTTATTTGTTTAAA+TGG + chr1_3:19920203-19920222 None:intergenic 10.0%
!! TTTAAACAAATAAATAAATC+TGG - chr1_3:19920203-19920222 Msa0108410:intron 10.0%
!! CAACAATAATAATAATATAA+GGG + chr1_3:19921823-19921842 None:intergenic 10.0%
!! ACAACAATAATAATAATATA+AGG + chr1_3:19921824-19921843 None:intergenic 10.0%
!! AAACATATTACATATATAAA+TGG - chr1_3:19927184-19927203 Msa0108410:intron 10.0%
!! AACATATTACATATATAAAT+GGG - chr1_3:19927185-19927204 Msa0108410:intron 10.0%
!! ATTTCTTAATAAAAAAAGTT+TGG + chr1_3:19927347-19927366 None:intergenic 10.0%
!!! AACTTTTTTTATTAAGAAAT+TGG - chr1_3:19927347-19927366 Msa0108410:intron 10.0%
!! TTATAATTTAATCGTATTCT+CGG - chr1_3:19916103-19916122 Msa0108410:intron 15.0%
!!! CTTTTTTCCATTTTTTTAAT+TGG - chr1_3:19916173-19916192 Msa0108410:intron 15.0%
!!! TAAGATTAAGAAACAATTTT+AGG - chr1_3:19916476-19916495 Msa0108410:intron 15.0%
!!! CTTTTTAATTAATGATTTTG+TGG - chr1_3:19917647-19917666 Msa0108410:intron 15.0%
!! ATTCAAAATGTAGAATTTAT+TGG - chr1_3:19918745-19918764 Msa0108410:intron 15.0%
!! TTCAAAATGTAGAATTTATT+GGG - chr1_3:19918746-19918765 Msa0108410:intron 15.0%
!! ATTGAAGAATATATAATAAC+AGG + chr1_3:19919206-19919225 None:intergenic 15.0%
!! TATTATATATTCTTCAATTC+TGG - chr1_3:19919208-19919227 Msa0108410:intron 15.0%
!!! ATTAGTTATAAACTTTTAGA+GGG + chr1_3:19919380-19919399 None:intergenic 15.0%
!!! AATTAGTTATAAACTTTTAG+AGG + chr1_3:19919381-19919400 None:intergenic 15.0%
!! ATAATTTAAAAAGTTTCTTC+CGG + chr1_3:19919897-19919916 None:intergenic 15.0%
!! AAACAAATAAATACTTAAGA+TGG - chr1_3:19920169-19920188 Msa0108410:intron 15.0%
!! ATTTCAACTATTTATATGAA+CGG + chr1_3:19920423-19920442 None:intergenic 15.0%
!! ATTACTAATCCATATTTATA+GGG + chr1_3:19921902-19921921 None:intergenic 15.0%
!! AATTACTAATCCATATTTAT+AGG + chr1_3:19921903-19921922 None:intergenic 15.0%
!! CCAATACTATATATAAATTA+CGG + chr1_3:19923014-19923033 None:intergenic 15.0%
!! CGTAATTTATATATAGTATT+GGG - chr1_3:19923012-19923031 Msa0108410:intron 15.0%
!! TTTAGTAGATACTTAATATT+TGG - chr1_3:19923087-19923106 Msa0108410:intron 15.0%
!!! TTTAAAATTTAAACAGGAAA+AGG + chr1_3:19923726-19923745 None:intergenic 15.0%
!! ATCAAATATAAGAAAATGTT+TGG + chr1_3:19923964-19923983 None:intergenic 15.0%
!!! GCTTTTTTTAATGAAAAAAT+TGG + chr1_3:19924308-19924327 None:intergenic 15.0%
!! TAAAATTGAGTATTATGTAA+TGG - chr1_3:19926692-19926711 Msa0108410:intron 15.0%
!!! CATTATGTTTTGTAAATTAT+TGG + chr1_3:19927071-19927090 None:intergenic 15.0%
!! ATGTAATATGTTTATTACAA+CGG + chr1_3:19927177-19927196 None:intergenic 15.0%
!!! TATATTTTGTTGTAATTTTG+TGG - chr1_3:19927622-19927641 Msa0108410:CDS 15.0%
!!! AAGTTGATTATAAATAAACT+TGG - chr1_3:19928479-19928498 Msa0108410:intron 15.0%
!! AGTTGATTATAAATAAACTT+GGG - chr1_3:19928480-19928499 Msa0108410:intron 15.0%
!!! TTTTATTTTTATTTCGAGTT+CGG - chr1_3:19928590-19928609 Msa0108410:intron 15.0%
!!! TGTATATCAAATATTTTATG+AGG - chr1_3:19928954-19928973 Msa0108410:five_prime_UTR 15.0%
!!! TCATATTTTTTCAACTTTCT+CGG - chr1_3:19914585-19914604 Msa0108410:three_prime_UTR 20.0%
!!! CTTTATTTCAAGATTTTTTG+TGG - chr1_3:19914955-19914974 Msa0108410:three_prime_UTR 20.0%
!!! AAATTGTTGTTGTTTTTGTT+TGG - chr1_3:19915183-19915202 Msa0108410:CDS 20.0%
!! TGGAATATGATATAACATTA+TGG + chr1_3:19915373-19915392 None:intergenic 20.0%
!!! TTATTGAGTTTTTACATGTT+AGG - chr1_3:19915438-19915457 Msa0108410:CDS 20.0%
!! ACTTAATCAGTTAAACATAA+TGG + chr1_3:19915559-19915578 None:intergenic 20.0%
!! TATTTAAGGAAAAATGTCTA+TGG - chr1_3:19915707-19915726 Msa0108410:intron 20.0%
!! ATTTAAGGAAAAATGTCTAT+GGG - chr1_3:19915708-19915727 Msa0108410:intron 20.0%
!!! TCTTTGATTTACATTAAGTT+TGG - chr1_3:19917325-19917344 Msa0108410:intron 20.0%
!! TAAAAAGATAGAAATAGCAA+AGG + chr1_3:19917634-19917653 None:intergenic 20.0%
!! TTTGTAAATGATTCAAAACA+AGG - chr1_3:19917675-19917694 Msa0108410:intron 20.0%
!!! CGTAACAATTTTCAAATTTA+AGG + chr1_3:19917770-19917789 None:intergenic 20.0%
!! GCAAATATAATAAAAACTTC+TGG - chr1_3:19917873-19917892 Msa0108410:intron 20.0%
!! GATCATATTAATTCTTGAAA+TGG - chr1_3:19919155-19919174 Msa0108410:intron 20.0%
!!! TAGATTATTTCTTTTTGAGT+AGG + chr1_3:19919755-19919774 None:intergenic 20.0%
!! AGGTTTACAATTTGTATTAT+TGG + chr1_3:19919844-19919863 None:intergenic 20.0%
!! ACTAGATAGAAAATCTAATA+AGG - chr1_3:19920726-19920745 Msa0108410:intron 20.0%
!!! AATTGAGTTGTTAACTTAAA+TGG - chr1_3:19921424-19921443 Msa0108410:CDS 20.0%
!! TTGTTTAAATCAGAATTAGT+TGG + chr1_3:19921485-19921504 None:intergenic 20.0%
!! TACATAGATACAATATGATA+TGG - chr1_3:19922682-19922701 Msa0108410:intron 20.0%
!! ATAATGACAACAAATTGATA+TGG + chr1_3:19922845-19922864 None:intergenic 20.0%
!! AAATTCAAAATTTAGAGGAA+CGG + chr1_3:19922933-19922952 None:intergenic 20.0%
!!! TTCCTCTAAATTTTGAATTT+CGG - chr1_3:19922933-19922952 Msa0108410:intron 20.0%
!! CCGTAATTTATATATAGTAT+TGG - chr1_3:19923011-19923030 Msa0108410:intron 20.0%
!!! TATATATAGTATTGGGAAAA+AGG - chr1_3:19923019-19923038 Msa0108410:intron 20.0%
!!! TGTAACTTTAAAGATTGATA+TGG - chr1_3:19923056-19923075 Msa0108410:intron 20.0%
!! AAGAAAAAGATTCAATGTAA+GGG + chr1_3:19923168-19923187 None:intergenic 20.0%
!!! ACTTGTATGATATTTTTACA+AGG + chr1_3:19923380-19923399 None:intergenic 20.0%
!! ATCAGTATTCTAGATATATA+TGG - chr1_3:19923632-19923651 Msa0108410:intron 20.0%
!! TATATTCTTTCAAGATATGA+AGG + chr1_3:19923919-19923938 None:intergenic 20.0%
!!! TATATTTGATGATTGTTTTC+AGG - chr1_3:19923974-19923993 Msa0108410:CDS 20.0%
!!! TTATTTGTGCAATAGATTTT+TGG - chr1_3:19924215-19924234 Msa0108410:intron 20.0%
!! ATTTATTAACAAAGTTGTCT+TGG + chr1_3:19924533-19924552 None:intergenic 20.0%
!!! TTTTCATAATCAGATAAACA+TGG + chr1_3:19924722-19924741 None:intergenic 20.0%
!! TGTCTCATCAAAATATTAAT+TGG - chr1_3:19925681-19925700 Msa0108410:CDS 20.0%
!! TAATTGGAATACTGATAATA+TGG - chr1_3:19925697-19925716 Msa0108410:CDS 20.0%
!!! CTAACTAATTTTAAACATCT+TGG + chr1_3:19925729-19925748 None:intergenic 20.0%
!!! TGTCTAACCTTTTTTTTTAT+TGG - chr1_3:19926247-19926266 Msa0108410:intron 20.0%
!!! GATATGAATTTTTTGTTAGA+CGG - chr1_3:19926448-19926467 Msa0108410:intron 20.0%
!!! TCAATTTTAGACGATATTTA+AGG + chr1_3:19926681-19926700 None:intergenic 20.0%
!! ACATATATAAATGGGAATAT+TGG - chr1_3:19927193-19927212 Msa0108410:intron 20.0%
!! CATATATAAATGGGAATATT+GGG - chr1_3:19927194-19927213 Msa0108410:intron 20.0%
!! AACAAGACAAATTTGAATAT+GGG + chr1_3:19927560-19927579 None:intergenic 20.0%
!! ATTTCATATTGTACAAAAGA+AGG + chr1_3:19927828-19927847 None:intergenic 20.0%
!! TTGAAAAAATGAAGAAAAAG+TGG - chr1_3:19928519-19928538 Msa0108410:intron 20.0%
!! GAAAATGAGGAAAATATAAT+AGG - chr1_3:19928658-19928677 Msa0108410:intron 20.0%
!!! TCTTACTAGATTACATTTTT+AGG + chr1_3:19928980-19928999 None:intergenic 20.0%
!! TAATCTAGTAAGAAACTTAT+TGG - chr1_3:19928987-19929006 Msa0108410:five_prime_UTR 20.0%
!! TTGTAAGATACTGATATTTA+TGG - chr1_3:19929024-19929043 Msa0108410:five_prime_UTR 20.0%
!!! AGTGAAAGATGTTTGATTTT+TGG + chr1_3:19914614-19914633 None:intergenic 25.0%
! AAAAACAAAGCAGAAAATGA+AGG + chr1_3:19914860-19914879 None:intergenic 25.0%
!! TTTTCAGTAATACATGTTTG+TGG - chr1_3:19915039-19915058 Msa0108410:CDS 25.0%
! TAATACATGTTTGTGGAAAT+TGG - chr1_3:19915046-19915065 Msa0108410:CDS 25.0%
! TGAATGATTTAGACTTTGAT+TGG - chr1_3:19915102-19915121 Msa0108410:CDS 25.0%
! GTTTCATTTCATGTTTAGAT+CGG - chr1_3:19915132-19915151 Msa0108410:CDS 25.0%
! GTTATATCATATTCCATACT+AGG - chr1_3:19915377-19915396 Msa0108410:CDS 25.0%
!!! TTGCACTTGTCAATTTTTTA+AGG - chr1_3:19915480-19915499 Msa0108410:CDS 25.0%
!! AATCAGTTAAACATAATGGA+GGG + chr1_3:19915555-19915574 None:intergenic 25.0%
! TAATCAGTTAAACATAATGG+AGG + chr1_3:19915556-19915575 None:intergenic 25.0%
! TAACTGATTAAGTCATTCTA+TGG - chr1_3:19915566-19915585 Msa0108410:CDS 25.0%
! AACTGATTAAGTCATTCTAT+GGG - chr1_3:19915567-19915586 Msa0108410:CDS 25.0%
! ACCTTGTTAAAAAGTTTGAT+AGG - chr1_3:19915590-19915609 Msa0108410:CDS 25.0%
!! TCCTATCAAACTTTTTAACA+AGG + chr1_3:19915594-19915613 None:intergenic 25.0%
!! AAAAGTTTGATAGGAACTTT+TGG - chr1_3:19915599-19915618 Msa0108410:CDS 25.0%
! AATCTGTATTATTAGAAGAC+AGG - chr1_3:19915952-19915971 Msa0108410:intron 25.0%
! ATCTGTATTATTAGAAGACA+GGG - chr1_3:19915953-19915972 Msa0108410:intron 25.0%
!!! AATATACTGATTTTCCTTGA+AGG - chr1_3:19916132-19916151 Msa0108410:intron 25.0%
!!! ACAATTTTAGGATCATAAGA+AGG - chr1_3:19916488-19916507 Msa0108410:intron 25.0%
!! TATTCTGTAGTTGTCAATTT+TGG - chr1_3:19916546-19916565 Msa0108410:intron 25.0%
! TGAAACTACTTCTTAGATAA+AGG - chr1_3:19916611-19916630 Msa0108410:intron 25.0%
! ATAGCAAAATATCGTAAGAA+TGG - chr1_3:19916861-19916880 Msa0108410:intron 25.0%
! ATGGAAGTTGAAATATAACT+TGG + chr1_3:19917263-19917282 None:intergenic 25.0%
! AAGTTATATTTCAACTTCCA+TGG - chr1_3:19917262-19917281 Msa0108410:CDS 25.0%
! AAATAAATGTTTCATTTCCC+TGG + chr1_3:19917300-19917319 None:intergenic 25.0%
! ATATGTGTTGAAAACAATAC+TGG + chr1_3:19917408-19917427 None:intergenic 25.0%
!! AAGGTAAATAAGCTTTTGTT+TGG + chr1_3:19917615-19917634 None:intergenic 25.0%
!! ATTTTCTTGAATTGCTAACA+TGG + chr1_3:19917705-19917724 None:intergenic 25.0%
!! ATATGAATATTTCTCTAGAG+CGG - chr1_3:19917944-19917963 Msa0108410:intron 25.0%
! TTAAATAACTAAGTTGCATG+AGG + chr1_3:19918094-19918113 None:intergenic 25.0%
! TGTAAATCGTATAAAACTGA+CGG + chr1_3:19918122-19918141 None:intergenic 25.0%
! ATATAATTGTTACCATACAG+AGG + chr1_3:19918307-19918326 None:intergenic 25.0%
! ATAGAGACAAACATAACATA+AGG - chr1_3:19918769-19918788 Msa0108410:intron 25.0%
! AAACACAATATACATCTAAG+GGG + chr1_3:19918913-19918932 None:intergenic 25.0%
! CAAACACAATATACATCTAA+GGG + chr1_3:19918914-19918933 None:intergenic 25.0%
! ACAAACACAATATACATCTA+AGG + chr1_3:19918915-19918934 None:intergenic 25.0%
! TGTATATTGTGTTTGTATTG+AGG - chr1_3:19918919-19918938 Msa0108410:intron 25.0%
! TTAAGTCTTTATCTTGTCAA+TGG - chr1_3:19919713-19919732 Msa0108410:intron 25.0%
! TATTGGAGAATATACAACTA+AGG + chr1_3:19919827-19919846 None:intergenic 25.0%
! TGTAAACCTTGTATATATGA+TGG - chr1_3:19919855-19919874 Msa0108410:intron 25.0%
! TCATTAGAATATCTACAAGT+TGG + chr1_3:19919994-19920013 None:intergenic 25.0%
! AGATTATATTCTCCCTAAAT+TGG + chr1_3:19920099-19920118 None:intergenic 25.0%
! TATTTGTATTCCTGAAGTTA+TGG - chr1_3:19920146-19920165 Msa0108410:intron 25.0%
! TTATTTGTTTCCATAACTTC+AGG + chr1_3:19920159-19920178 None:intergenic 25.0%
! AACAAATCATGACAACAATT+AGG - chr1_3:19920227-19920246 Msa0108410:intron 25.0%
!! TAAGATTAGAAACTGATTCT+AGG - chr1_3:19920289-19920308 Msa0108410:intron 25.0%
!!! CTATAGTTGATAATAGAACT+TGG - chr1_3:19920500-19920519 Msa0108410:intron 25.0%
! TTATAATGATCTGACAATGA+TGG + chr1_3:19920597-19920616 None:intergenic 25.0%
!! TTTAAAGTCACTCATATGAT+TGG - chr1_3:19920642-19920661 Msa0108410:intron 25.0%
! AGTTGTTAACTTAAATGGAT+TGG - chr1_3:19921429-19921448 Msa0108410:CDS 25.0%
!!! AACTTTTTCTGAAAATCACA+TGG + chr1_3:19921554-19921573 None:intergenic 25.0%
! AATCTTATTATAGCATGTCT+TGG + chr1_3:19921728-19921747 None:intergenic 25.0%
! GACTCAATCATAAATAAAGA+GGG + chr1_3:19921876-19921895 None:intergenic 25.0%
! AGACTCAATCATAAATAAAG+AGG + chr1_3:19921877-19921896 None:intergenic 25.0%
! TCAATGAAACAGTAAATCAA+TGG + chr1_3:19922046-19922065 None:intergenic 25.0%
!! TATAATCTTCTGCATTTTGT+AGG + chr1_3:19922100-19922119 None:intergenic 25.0%
!! AGCAATTGTTATTCAATTAC+TGG - chr1_3:19922134-19922153 Msa0108410:intron 25.0%
! AACAATGATTAAAGTCACTA+TGG + chr1_3:19922229-19922248 None:intergenic 25.0%
! AATATGAACCTTATATTTCC+AGG - chr1_3:19922300-19922319 Msa0108410:intron 25.0%
! GATACAATATGATATGGATA+CGG - chr1_3:19922688-19922707 Msa0108410:intron 25.0%
! ATACAATATGATATGGATAC+GGG - chr1_3:19922689-19922708 Msa0108410:intron 25.0%
! AATTCAAAATTTAGAGGAAC+GGG + chr1_3:19922932-19922951 None:intergenic 25.0%
! GAATAACTTGAAACATTTGA+AGG + chr1_3:19923138-19923157 None:intergenic 25.0%
! CAAGAAAAAGATTCAATGTA+AGG + chr1_3:19923169-19923188 None:intergenic 25.0%
!! AATCTTTTTCTTGCTTCTAA+AGG - chr1_3:19923176-19923195 Msa0108410:intron 25.0%
!! ATCTTTTTCTTGCTTCTAAA+GGG - chr1_3:19923177-19923196 Msa0108410:intron 25.0%
!!! ATAAATAAATCACTTGCTGT+TGG - chr1_3:19923587-19923606 Msa0108410:intron 25.0%
! TTTCAGGAATATATTCAAGA+TGG - chr1_3:19923990-19924009 Msa0108410:CDS 25.0%
! TCATCATTCATGTCTTATAT+TGG - chr1_3:19924177-19924196 Msa0108410:intron 25.0%
!!! AAAAGGTTTTGTCTAAATAG+TGG - chr1_3:19924457-19924476 Msa0108410:intron 25.0%
!!! AAAGGTTTTGTCTAAATAGT+GGG - chr1_3:19924458-19924477 Msa0108410:intron 25.0%
!! CAAAGTATTTCTTGTACTTT+AGG + chr1_3:19924560-19924579 None:intergenic 25.0%
! AAAGTACAAGAAATACTTTG+AGG - chr1_3:19924560-19924579 Msa0108410:CDS 25.0%
! AAGTACAAGAAATACTTTGA+GGG - chr1_3:19924561-19924580 Msa0108410:CDS 25.0%
!! CTCTACTAGTTTGTAAATAT+CGG + chr1_3:19924589-19924608 None:intergenic 25.0%
! TTATGAAAACTGTATTAGTG+TGG - chr1_3:19924733-19924752 Msa0108410:intron 25.0%
! TATGAAAACTGTATTAGTGT+GGG - chr1_3:19924734-19924753 Msa0108410:intron 25.0%
! AATTCCAAATCATGTTTCAA+AGG - chr1_3:19925049-19925068 Msa0108410:intron 25.0%
!!! TAATGAACCACAGTTTTAAT+TGG - chr1_3:19925150-19925169 Msa0108410:intron 25.0%
! TAAGGATAATGATAGAGTTT+GGG + chr1_3:19925206-19925225 None:intergenic 25.0%
! TTAAGGATAATGATAGAGTT+TGG + chr1_3:19925207-19925226 None:intergenic 25.0%
! TATCATTATCCTTAAAGAAG+AGG - chr1_3:19925212-19925231 Msa0108410:CDS 25.0%
! ATCATTATCCTTAAAGAAGA+GGG - chr1_3:19925213-19925232 Msa0108410:CDS 25.0%
!! TTACATGATACTTGATGTTT+TGG + chr1_3:19925544-19925563 None:intergenic 25.0%
!! CATGTAATAGTCTAAAACTT+TGG - chr1_3:19925557-19925576 Msa0108410:CDS 25.0%
!!! CGAAATATTTTTGCATAGTT+TGG + chr1_3:19925641-19925660 None:intergenic 25.0%
! AGTTATGCACAACATTTATT+TGG + chr1_3:19925774-19925793 None:intergenic 25.0%
! AATAAATGTTGTGCATAACT+TGG - chr1_3:19925774-19925793 Msa0108410:intron 25.0%
! TAATGTATGGTTTGATACAT+AGG + chr1_3:19925884-19925903 None:intergenic 25.0%
!!! TCTAGCTTTCATATAATGTA+TGG + chr1_3:19925897-19925916 None:intergenic 25.0%
!! TTATCAAATTTTTCCTCCAT+TGG - chr1_3:19925921-19925940 Msa0108410:intron 25.0%
!!! ACCTTTTTTTTTATTGGCTT+CGG - chr1_3:19926253-19926272 Msa0108410:intron 25.0%
!!! ACAAAGTTATTTTTCAGAAC+AGG - chr1_3:19926395-19926414 Msa0108410:intron 25.0%
!!! CAAAGTTATTTTTCAGAACA+GGG - chr1_3:19926396-19926415 Msa0108410:intron 25.0%
!! TATTTAAGGCTGAAAGAAAT+AGG + chr1_3:19926667-19926686 None:intergenic 25.0%
! TATCTATTCATGCAGTTATT+CGG - chr1_3:19926723-19926742 Msa0108410:intron 25.0%
! AAACATTCAAAATGCCAAAA+TGG + chr1_3:19926928-19926947 None:intergenic 25.0%
!!! TCCTGTATTTTTTAAGGAAT+GGG + chr1_3:19927022-19927041 None:intergenic 25.0%
!!! ATCCTGTATTTTTTAAGGAA+TGG + chr1_3:19927023-19927042 None:intergenic 25.0%
!!! ATTGCATCCTGTATTTTTTA+AGG + chr1_3:19927028-19927047 None:intergenic 25.0%
! ATTAATAGTTGAATGAGTGA+AGG - chr1_3:19927217-19927236 Msa0108410:intron 25.0%
! TTAATAGTTGAATGAGTGAA+GGG - chr1_3:19927218-19927237 Msa0108410:intron 25.0%
!!! AAGAGTATTGATTACGATAT+GGG - chr1_3:19927400-19927419 Msa0108410:intron 25.0%
! GAACAAGACAAATTTGAATA+TGG + chr1_3:19927561-19927580 None:intergenic 25.0%
! TTATATAGTTTCTGAACTTG+AGG + chr1_3:19927791-19927810 None:intergenic 25.0%
! ATATTGTACAAAAGAAGGAT+GGG + chr1_3:19927823-19927842 None:intergenic 25.0%
!! TAAAACAAATGTTTGAAGCT+TGG - chr1_3:19928423-19928442 Msa0108410:intron 25.0%
! AAAAAATGAAGAAAAAGTGG+TGG - chr1_3:19928522-19928541 Msa0108410:intron 25.0%
! AAAAATGAAGAAAAAGTGGT+GGG - chr1_3:19928523-19928542 Msa0108410:intron 25.0%
! TGAGGAAAATATAATAGGAA+AGG - chr1_3:19928663-19928682 Msa0108410:intron 25.0%
! AAAAATACTTGGTAAATGCA+AGG - chr1_3:19928784-19928803 Msa0108410:five_prime_UTR 25.0%
! ATCTTACAATAACTTCTACA+TGG + chr1_3:19929013-19929032 None:intergenic 25.0%
AGACAATGGTAAAGAATGAA+AGG + chr1_3:19914654-19914673 None:intergenic 30.0%
GAGAAAAAAAACAGAGACAA+TGG + chr1_3:19914668-19914687 None:intergenic 30.0%
CTTGAAATAAAGTTCAGTTC+AGG + chr1_3:19914947-19914966 None:intergenic 30.0%
! TCTAAGATTATGCAAGATTC+CGG - chr1_3:19915208-19915227 Msa0108410:CDS 30.0%
ACATGTTAGGAATAAAGATG+AGG - chr1_3:19915451-19915470 Msa0108410:CDS 30.0%
! ATCAGTTAAACATAATGGAG+GGG + chr1_3:19915554-19915573 None:intergenic 30.0%
!! TAGGAACTTTTGGTTGAAAA+TGG - chr1_3:19915609-19915628 Msa0108410:CDS 30.0%
CACAACAACACAAACAAAAA+TGG + chr1_3:19915676-19915695 None:intergenic 30.0%
!! CATTTTTGTTTGTGTTGTTG+TGG - chr1_3:19915674-19915693 Msa0108410:CDS 30.0%
! TCAGAAAGATCATCATTTTC+AGG + chr1_3:19915870-19915889 None:intergenic 30.0%
AACACCTTATGTTTCAAAGA+AGG - chr1_3:19916064-19916083 Msa0108410:intron 30.0%
!! AGTACCTTCTTTGAAACATA+AGG + chr1_3:19916071-19916090 None:intergenic 30.0%
TAGTATACATATACCATCAC+TGG - chr1_3:19916322-19916341 Msa0108410:intron 30.0%
ACTACTTCTTAGATAAAGGT+AGG - chr1_3:19916615-19916634 Msa0108410:intron 30.0%
!! TGCAAAAAATTCCACTTTTC+TGG - chr1_3:19916756-19916775 Msa0108410:CDS 30.0%
!!! GCAGATTGTTTTTTTCTTCA+CGG - chr1_3:19916792-19916811 Msa0108410:CDS 30.0%
ACATGTTTCCATCAGAATTT+GGG + chr1_3:19917238-19917257 None:intergenic 30.0%
TACATGTTTCCATCAGAATT+TGG + chr1_3:19917239-19917258 None:intergenic 30.0%
TTATATTTCAACTTCCATGG+AGG - chr1_3:19917265-19917284 Msa0108410:CDS 30.0%
GTTTGGAAGCGATTAAAATT+AGG - chr1_3:19917342-19917361 Msa0108410:intron 30.0%
! AATTTTCAAACCACGACATA+AGG + chr1_3:19917431-19917450 None:intergenic 30.0%
GAATAATGACAGACAACAAA+CGG + chr1_3:19917587-19917606 None:intergenic 30.0%
AAAAGTGAAACAAGACTGTT+TGG - chr1_3:19918031-19918050 Msa0108410:intron 30.0%
CTGTAATTGCATATACATGA+GGG + chr1_3:19918360-19918379 None:intergenic 30.0%
TCTGTAATTGCATATACATG+AGG + chr1_3:19918361-19918380 None:intergenic 30.0%
CATCGATATAAGTTCATATG+AGG + chr1_3:19918424-19918443 None:intergenic 30.0%
CTCATATGAACTTATATCGA+TGG - chr1_3:19918422-19918441 Msa0108410:intron 30.0%
AAGTTCTTGCTTAAAACCAA+TGG + chr1_3:19918477-19918496 None:intergenic 30.0%
! CAAAGTTTTTGCATTACCAA+AGG + chr1_3:19919096-19919115 None:intergenic 30.0%
! TTCTGGAAGTTCTCATAATT+TGG - chr1_3:19919225-19919244 Msa0108410:intron 30.0%
ATAATTTGGTTGAATGTGAC+AGG - chr1_3:19919239-19919258 Msa0108410:intron 30.0%
TAATTTGGTTGAATGTGACA+GGG - chr1_3:19919240-19919259 Msa0108410:intron 30.0%
GTGCTAATATTCAAACATGT+AGG - chr1_3:19919307-19919326 Msa0108410:intron 30.0%
!! TTTTCAAGCAAAACTGTTGA+TGG + chr1_3:19919457-19919476 None:intergenic 30.0%
! ATCAACAGTTTTGCTTGAAA+AGG - chr1_3:19919456-19919475 Msa0108410:intron 30.0%
TAGTGTCTACTGATATAATG+CGG + chr1_3:19919522-19919541 None:intergenic 30.0%
! ATATTTTATCAGCTATGTGC+CGG - chr1_3:19919606-19919625 Msa0108410:intron 30.0%
AGTATTGCAGAAATGATAGT+CGG + chr1_3:19919670-19919689 None:intergenic 30.0%
TTTATCTTGTCAATGGTTGT+TGG - chr1_3:19919720-19919739 Msa0108410:intron 30.0%
CACAATCCATCATATATACA+AGG + chr1_3:19919864-19919883 None:intergenic 30.0%
! TTTTAAATTATTTGCCCACC+TGG - chr1_3:19919906-19919925 Msa0108410:intron 30.0%
! GTACAGTAATTCTCTAGAAA+AGG - chr1_3:19919928-19919947 Msa0108410:intron 30.0%
!! AAAAGTATCTCCTCCAATTT+AGG - chr1_3:19920083-19920102 Msa0108410:intron 30.0%
! AAAGTATCTCCTCCAATTTA+GGG - chr1_3:19920084-19920103 Msa0108410:intron 30.0%
TTATATTCTCCCTAAATTGG+AGG + chr1_3:19920096-19920115 None:intergenic 30.0%
ATGACAACAATTAGGTAACA+TGG - chr1_3:19920235-19920254 Msa0108410:intron 30.0%
!! ATTCTAGAATAACAGCTTAC+TGG - chr1_3:19920378-19920397 Msa0108410:CDS 30.0%
CTATCAAATACAGCTTCTAT+GGG + chr1_3:19920825-19920844 None:intergenic 30.0%
!!! CTGTTATTTTCTTCGAGTAT+GGG - chr1_3:19920863-19920882 Msa0108410:intron 30.0%
!! ACTTTGGAGAGATTGTTTTT+GGG + chr1_3:19920987-19921006 None:intergenic 30.0%
! ATCCATGAGACAATTTTCTT+CGG + chr1_3:19921236-19921255 None:intergenic 30.0%
AGCATTTATACTCTTCTATC+TGG - chr1_3:19921258-19921277 Msa0108410:CDS 30.0%
GCATTTATACTCTTCTATCT+GGG - chr1_3:19921259-19921278 Msa0108410:CDS 30.0%
AAATAGATGCAAGACATAGT+AGG - chr1_3:19921305-19921324 Msa0108410:intron 30.0%
ACAATACAATCTCTGTTTGT+TGG - chr1_3:19921501-19921520 Msa0108410:CDS 30.0%
CAATACAATCTCTGTTTGTT+GGG - chr1_3:19921502-19921521 Msa0108410:CDS 30.0%
! AATACAATCTCTGTTTGTTG+GGG - chr1_3:19921503-19921522 Msa0108410:CDS 30.0%
TGCTACAATCAGTAACAAAA+AGG - chr1_3:19921573-19921592 Msa0108410:intron 30.0%
ATTATTGAAGTGTAACTGCA+TGG + chr1_3:19921649-19921668 None:intergenic 30.0%
TGAGTCTATCCCTATAAATA+TGG - chr1_3:19921890-19921909 Msa0108410:intron 30.0%
!! ACTTGATATTGACTTGATAG+TGG + chr1_3:19921942-19921961 None:intergenic 30.0%
AATGTTACAGACAAGACAAA+AGG + chr1_3:19922003-19922022 None:intergenic 30.0%
AATGATTAAAGTCACTATGG+AGG + chr1_3:19922226-19922245 None:intergenic 30.0%
CAATTGTTTGACTGATTGAT+TGG - chr1_3:19922254-19922273 Msa0108410:intron 30.0%
AACTTTCGTAAAATGTTAGC+TGG - chr1_3:19922624-19922643 Msa0108410:intron 30.0%
TACAATATGATATGGATACG+GGG - chr1_3:19922690-19922709 Msa0108410:intron 30.0%
TCATAATAGCATGATCATAG+AGG + chr1_3:19922892-19922911 None:intergenic 30.0%
TGCCGAAATTCAAAATTTAG+AGG + chr1_3:19922938-19922957 None:intergenic 30.0%
TATAAATTACGGCTATCAGA+TGG + chr1_3:19923003-19923022 None:intergenic 30.0%
AAAAAGATTCAATGTAAGGG+AGG + chr1_3:19923165-19923184 None:intergenic 30.0%
TTGTGTTGAATACTGAATAC+TGG - chr1_3:19923329-19923348 Msa0108410:intron 30.0%
!! TGATATTTTTACAAGGAGTG+TGG + chr1_3:19923373-19923392 None:intergenic 30.0%
AAGTCATTATGCTCAAATAG+TGG - chr1_3:19923396-19923415 Msa0108410:intron 30.0%
ATGTAATGAACGCATAATGA+TGG - chr1_3:19923450-19923469 Msa0108410:intron 30.0%
CATATTATAGTCTGTCTTGT+AGG - chr1_3:19923496-19923515 Msa0108410:intron 30.0%
TATATTCATGCCTGTTTGAT+TGG - chr1_3:19923552-19923571 Msa0108410:intron 30.0%
! CTTATTCAAGTTAGAACAAG+AGG - chr1_3:19923849-19923868 Msa0108410:intron 30.0%
AATATAATCAAAGCTGACCT+AGG - chr1_3:19923933-19923952 Msa0108410:intron 30.0%
ATATTCAAGATGGAATTGAC+TGG - chr1_3:19924000-19924019 Msa0108410:CDS 30.0%
TATTCAAGATGGAATTGACT+GGG - chr1_3:19924001-19924020 Msa0108410:CDS 30.0%
!! CTGTCTTAATCTTTTTGAGA+AGG - chr1_3:19924052-19924071 Msa0108410:intron 30.0%
CAAAAGATTGTTCAGAAAAG+GGG + chr1_3:19924101-19924120 None:intergenic 30.0%
CCAAAAGATTGTTCAGAAAA+GGG + chr1_3:19924102-19924121 None:intergenic 30.0%
! CCTTTTCTGAACAATCTTTT+GGG - chr1_3:19924100-19924119 Msa0108410:intron 30.0%
!!! CAATAGATTTTTGGCTTCTA+AGG - chr1_3:19924224-19924243 Msa0108410:intron 30.0%
!! AAAAGCATCACAAATCACAA+TGG + chr1_3:19924280-19924299 None:intergenic 30.0%
GTTAATTGGTGAACTGTAAA+TGG - chr1_3:19924813-19924832 Msa0108410:intron 30.0%
! ATGTCAGAATTTTCACATCA+AGG + chr1_3:19924870-19924889 None:intergenic 30.0%
ATGTCAAATCTGTACCATTT+GGG + chr1_3:19925003-19925022 None:intergenic 30.0%
AATGTCAAATCTGTACCATT+TGG + chr1_3:19925004-19925023 None:intergenic 30.0%
! TAAATGCTGTTTAAGCTTGT+TGG + chr1_3:19925029-19925048 None:intergenic 30.0%
!! TTCTCCTTTGAAACATGATT+TGG + chr1_3:19925056-19925075 None:intergenic 30.0%
CGATATTCCAATTAAAACTG+TGG + chr1_3:19925160-19925179 None:intergenic 30.0%
! TTCTTTTTGATCCTTTCCTT+AGG - chr1_3:19925285-19925304 Msa0108410:CDS 30.0%
ATATGAGCTGCAAATATTTG+AGG + chr1_3:19925403-19925422 None:intergenic 30.0%
! AAGTGTTGCAACAAAATTCA+AGG - chr1_3:19925492-19925511 Msa0108410:CDS 30.0%
GTATATCAGCTTTCATTATG+AGG - chr1_3:19925514-19925533 Msa0108410:CDS 30.0%
! ATAGTTTGGTCAAGGTATTT+AGG + chr1_3:19925627-19925646 None:intergenic 30.0%
! ATTTTTGCATAGTTTGGTCA+AGG + chr1_3:19925635-19925654 None:intergenic 30.0%
AAAAATATTTCGCTTACTGC+CGG - chr1_3:19925649-19925668 Msa0108410:intron 30.0%
! TGGTTTAGGTTATCATAAGT+AGG - chr1_3:19925794-19925813 Msa0108410:intron 30.0%
TAGGTTATCATAAGTAGGAA+AGG - chr1_3:19925799-19925818 Msa0108410:intron 30.0%
TTAATGCAGCGAATAAAATG+TGG + chr1_3:19925996-19926015 None:intergenic 30.0%
ACTTTCTGTTATATACCTTC+TGG + chr1_3:19926153-19926172 None:intergenic 30.0%
ACCGAAGCCAATAAAAAAAA+AGG + chr1_3:19926257-19926276 None:intergenic 30.0%
ATTGAAACTGAAACACTAAG+TGG + chr1_3:19926329-19926348 None:intergenic 30.0%
ATCTATTCATGCAGTTATTC+GGG - chr1_3:19926724-19926743 Msa0108410:intron 30.0%
CTGCTATTATTATACAGAAG+CGG - chr1_3:19926795-19926814 Msa0108410:intron 30.0%
CAATATATCAATACGAGTGT+CGG - chr1_3:19926968-19926987 Msa0108410:intron 30.0%
!!! CCTGTATTTTTTAAGGAATG+GGG + chr1_3:19927021-19927040 None:intergenic 30.0%
ATGATGACCAAAAATAGTGA+TGG - chr1_3:19927111-19927130 Msa0108410:intron 30.0%
! CCAATTTCCATCACTATTTT+TGG + chr1_3:19927121-19927140 None:intergenic 30.0%
! CCAAAAATAGTGATGGAAAT+TGG - chr1_3:19927118-19927137 Msa0108410:intron 30.0%
! TAGTGATGGAAATTGGAATA+TGG - chr1_3:19927125-19927144 Msa0108410:intron 30.0%
! AGTGATGGAAATTGGAATAT+GGG - chr1_3:19927126-19927145 Msa0108410:intron 30.0%
TAATAGTTGAATGAGTGAAG+GGG - chr1_3:19927219-19927238 Msa0108410:intron 30.0%
!! CAAGAGTATTGATTACGATA+TGG - chr1_3:19927399-19927418 Msa0108410:intron 30.0%
ATTAAGTATCAATGCATGAC+AGG - chr1_3:19927430-19927449 Msa0108410:intron 30.0%
TATCATTTGCACATTTAGGT+AGG + chr1_3:19927493-19927512 None:intergenic 30.0%
CATCTATCATTTGCACATTT+AGG + chr1_3:19927497-19927516 None:intergenic 30.0%
AGATGAATACAAGTCAACAT+AGG - chr1_3:19927512-19927531 Msa0108410:intron 30.0%
AATATGGGAAGTAAAACACT+TGG + chr1_3:19927545-19927564 None:intergenic 30.0%
GAGTAGCTCAAATAAAGTTA+TGG + chr1_3:19927682-19927701 None:intergenic 30.0%
! GATATTGGATTTTCGAAACA+CGG - chr1_3:19927744-19927763 Msa0108410:CDS 30.0%
! ATATTGGATTTTCGAAACAC+GGG - chr1_3:19927745-19927764 Msa0108410:CDS 30.0%
CATATTGTACAAAAGAAGGA+TGG + chr1_3:19927824-19927843 None:intergenic 30.0%
TTTCACTTCAACTAAGAACT+TGG + chr1_3:19928354-19928373 None:intergenic 30.0%
TTCTTAGTTGAAGTGAAATC+TGG - chr1_3:19928356-19928375 Msa0108410:intron 30.0%
! AAATGTTTGAAGCTTGGAAA+AGG - chr1_3:19928429-19928448 Msa0108410:intron 30.0%
! AATGTTTGAAGCTTGGAAAA+GGG - chr1_3:19928430-19928449 Msa0108410:intron 30.0%
AAAATGAAGAAAAAGTGGTG+GGG - chr1_3:19928524-19928543 Msa0108410:intron 30.0%
! CTCATTTTCCCATATTTTGT+TGG + chr1_3:19928647-19928666 None:intergenic 30.0%
CAACAAAATATGGGAAAATG+AGG - chr1_3:19928645-19928664 Msa0108410:intron 30.0%
!! TTACCAAGTATTTTTGCAAG+AGG + chr1_3:19928779-19928798 None:intergenic 30.0%
AAGAGCTATAATGCAAAACT+TGG - chr1_3:19928900-19928919 Msa0108410:five_prime_UTR 30.0%
! GTGATTCATGTATTCTTTTC+TGG - chr1_3:19928922-19928941 Msa0108410:five_prime_UTR 30.0%
AACTGTGAAAACAGAGATGA+AGG + chr1_3:19914736-19914755 None:intergenic 35.0%
TTGATCGCTTCAACTTTCAT+TGG - chr1_3:19914811-19914830 Msa0108410:three_prime_UTR 35.0%
CAACTTTCATTGGAGAATCT+AGG - chr1_3:19914821-19914840 Msa0108410:three_prime_UTR 35.0%
TACATGTTTGTGGAAATTGG+AGG - chr1_3:19915049-19915068 Msa0108410:CDS 35.0%
GAAATTGGAGGATCTGTTTA+TGG - chr1_3:19915061-19915080 Msa0108410:CDS 35.0%
! GAGGATCTGTTTATGGATTT+TGG - chr1_3:19915068-19915087 Msa0108410:CDS 35.0%
! GTTTAGATCGGATACGTTTT+AGG - chr1_3:19915144-19915163 Msa0108410:CDS 35.0%
CTAAGATTATGCAAGATTCC+GGG - chr1_3:19915209-19915228 Msa0108410:CDS 35.0%
TCAAATAAACACGCACACAT+GGG + chr1_3:19915265-19915284 None:intergenic 35.0%
TTTGAGTATGTATTAGCCAC+TGG - chr1_3:19915280-19915299 Msa0108410:CDS 35.0%
TTGAGTATGTATTAGCCACT+GGG - chr1_3:19915281-19915300 Msa0108410:CDS 35.0%
TTCCATACTAGGAATTACGA+TGG - chr1_3:19915388-19915407 Msa0108410:CDS 35.0%
GTTAGGAATAAAGATGAGGT+TGG - chr1_3:19915455-19915474 Msa0108410:CDS 35.0%
TTACCGTTAACCTTAAAACC+AGG + chr1_3:19915777-19915796 None:intergenic 35.0%
! AGGGAATCTATTGTTGATGA+AGG - chr1_3:19915972-19915991 Msa0108410:intron 35.0%
! ATCTATTGTTGATGAAGGCT+TGG - chr1_3:19915977-19915996 Msa0108410:intron 35.0%
TAGAAGACACTGAAACTGAT+TGG + chr1_3:19916022-19916041 None:intergenic 35.0%
AATCAGTTTCAGTGTCTTCT+AGG - chr1_3:19916021-19916040 Msa0108410:intron 35.0%
ATCAGTTTCAGTGTCTTCTA+GGG - chr1_3:19916022-19916041 Msa0108410:intron 35.0%
AGAAGGAATCAGAGTCATAT+TGG - chr1_3:19916505-19916524 Msa0108410:intron 35.0%
AGGCCAAAAGAAATGAATGT+TGG - chr1_3:19916635-19916654 Msa0108410:intron 35.0%
! ACGCCAACATTCATTTCTTT+TGG + chr1_3:19916641-19916660 None:intergenic 35.0%
TCAGACAACTTATAATCCAG+TGG - chr1_3:19916683-19916702 Msa0108410:intron 35.0%
! TGGTGTTAGTTCAAACTTCA+AGG + chr1_3:19916960-19916979 None:intergenic 35.0%
! GACAATTTTAGATCGCTCAT+TGG + chr1_3:19916980-19916999 None:intergenic 35.0%
! GAGCGATCTAAAATTGTCAA+TGG - chr1_3:19916982-19917001 Msa0108410:CDS 35.0%
AGGAAGACATATCGGAATTT+GGG + chr1_3:19917011-19917030 None:intergenic 35.0%
AAGGAAGACATATCGGAATT+TGG + chr1_3:19917012-19917031 None:intergenic 35.0%
TCACAACAAGGAAGACATAT+CGG + chr1_3:19917019-19917038 None:intergenic 35.0%
! ATATGTCTTCCTTGTTGTGA+TGG - chr1_3:19917019-19917038 Msa0108410:CDS 35.0%
!!! CACAAATGTCATTTTTGAGC+TGG + chr1_3:19917070-19917089 None:intergenic 35.0%
!! CTCCAAAGGTTTGTTAAAGA+AGG + chr1_3:19917144-19917163 None:intergenic 35.0%
AATTTGGGAGTCATAAGCAT+AGG + chr1_3:19917223-19917242 None:intergenic 35.0%
TTATGACTCCCAAATTCTGA+TGG - chr1_3:19917227-19917246 Msa0108410:CDS 35.0%
GCAGAAGACAAACAAGAAAA+TGG + chr1_3:19917373-19917392 None:intergenic 35.0%
TATTTCAGAAACTCCAGTCT+TGG - chr1_3:19917820-19917839 Msa0108410:intron 35.0%
TCTTGGTTTCAACTTCCAAA+TGG - chr1_3:19917837-19917856 Msa0108410:intron 35.0%
CTTGGTTTCAACTTCCAAAT+GGG - chr1_3:19917838-19917857 Msa0108410:intron 35.0%
TTCAACTTCCAAATGGGAAT+TGG - chr1_3:19917844-19917863 Msa0108410:intron 35.0%
TCAACTTCCAAATGGGAATT+GGG - chr1_3:19917845-19917864 Msa0108410:intron 35.0%
!! TCTGTTATTTCATTGCCAGA+TGG - chr1_3:19917903-19917922 Msa0108410:intron 35.0%
!! CTGTTATTTCATTGCCAGAT+GGG - chr1_3:19917904-19917923 Msa0108410:intron 35.0%
ATTTATCTTACCTTCCCATC+TGG + chr1_3:19917921-19917940 None:intergenic 35.0%
!!! ACATTCTCTGGGACTTTTAT+AGG - chr1_3:19918004-19918023 Msa0108410:intron 35.0%
GAAACAAGACTGTTTGGTAT+CGG - chr1_3:19918037-19918056 Msa0108410:intron 35.0%
GCAAATCCTGATATTCTTGA+TGG - chr1_3:19918059-19918078 Msa0108410:intron 35.0%
TTGCACAGTTAGACAGATAA+CGG + chr1_3:19918231-19918250 None:intergenic 35.0%
TACAGAGGAACTTTCTTGAA+AGG + chr1_3:19918292-19918311 None:intergenic 35.0%
TTCAAGAAAGTTCCTCTGTA+TGG - chr1_3:19918292-19918311 Msa0108410:intron 35.0%
AGTTACCTCGTATCATTTCT+CGG + chr1_3:19918393-19918412 None:intergenic 35.0%
AGAGTTAAGACTTCTTCCAT+TGG - chr1_3:19918458-19918477 Msa0108410:intron 35.0%
! CATGACTAGCTACTCATTAA+AGG + chr1_3:19918577-19918596 None:intergenic 35.0%
! TGACATGTTGATGGATATAG+AGG - chr1_3:19918817-19918836 Msa0108410:intron 35.0%
ATACATCTAAGGGGAAAACA+AGG + chr1_3:19918904-19918923 None:intergenic 35.0%
AAAGATAGCAATGCAGTACT+TGG - chr1_3:19919007-19919026 Msa0108410:intron 35.0%
AATCCAATTCTTGAAGCCTT+TGG - chr1_3:19919077-19919096 Msa0108410:intron 35.0%
TTACCAAAGGCTTCAAGAAT+TGG + chr1_3:19919083-19919102 None:intergenic 35.0%
AGCGAAACTGGAAAAATTTC+TGG - chr1_3:19919285-19919304 Msa0108410:intron 35.0%
!! GTAGGTTTTCTGCTGTTTAA+TGG - chr1_3:19919325-19919344 Msa0108410:intron 35.0%
!! TAAACTTTTAGAGGGAGCAA+AGG + chr1_3:19919372-19919391 None:intergenic 35.0%
AGTGTCTACTGATATAATGC+GGG + chr1_3:19919521-19919540 None:intergenic 35.0%
CAGTAGACACTAATGTTGTT+TGG - chr1_3:19919530-19919549 Msa0108410:intron 35.0%
AGAGTAGTTCAATGCAATGA+AGG - chr1_3:19919567-19919586 Msa0108410:CDS 35.0%
GAGTAGTTCAATGCAATGAA+GGG - chr1_3:19919568-19919587 Msa0108410:CDS 35.0%
AGTAGTTCAATGCAATGAAG+GGG - chr1_3:19919569-19919588 Msa0108410:CDS 35.0%
GTATTGCAGAAATGATAGTC+GGG + chr1_3:19919669-19919688 None:intergenic 35.0%
! TTCTAGAGAATTACTGTACC+AGG + chr1_3:19919927-19919946 None:intergenic 35.0%
TCTAGAAAAGGTTCTCTCTA+AGG - chr1_3:19919940-19919959 Msa0108410:CDS 35.0%
ATTCTAATGAAGTCTCTTCG+AGG - chr1_3:19920004-19920023 Msa0108410:CDS 35.0%
! AGTATCTAAGATCATCGCAT+AGG + chr1_3:19920269-19920288 None:intergenic 35.0%
GGTAACGTACATGTAACTAA+AGG - chr1_3:19920521-19920540 Msa0108410:intron 35.0%
! TATGATTGGTTGTGATTCTC+TGG - chr1_3:19920656-19920675 Msa0108410:intron 35.0%
CCTATCAAATACAGCTTCTA+TGG + chr1_3:19920826-19920845 None:intergenic 35.0%
CCATAGAAGCTGTATTTGAT+AGG - chr1_3:19920823-19920842 Msa0108410:intron 35.0%
CTGTATTTGATAGGTGTAGT+AGG - chr1_3:19920832-19920851 Msa0108410:intron 35.0%
CGAAGAAAATAACAGGATAG+AGG + chr1_3:19920858-19920877 None:intergenic 35.0%
CCATACTCGAAGAAAATAAC+AGG + chr1_3:19920865-19920884 None:intergenic 35.0%
!!! CCTGTTATTTTCTTCGAGTA+TGG - chr1_3:19920862-19920881 Msa0108410:intron 35.0%
! GATACCAAACTGTTCTAAGT+AGG - chr1_3:19920885-19920904 Msa0108410:intron 35.0%
ATAGCCTACTTAGAACAGTT+TGG + chr1_3:19920892-19920911 None:intergenic 35.0%
!! CACTTTGGAGAGATTGTTTT+TGG + chr1_3:19920988-19921007 None:intergenic 35.0%
TCAGATGAACAGTTATGATC+TGG - chr1_3:19921019-19921038 Msa0108410:intron 35.0%
TAACCAACATATAGTGATGC+CGG - chr1_3:19921051-19921070 Msa0108410:intron 35.0%
CAAAGGTCAAATCCTTTCTT+TGG + chr1_3:19921136-19921155 None:intergenic 35.0%
AAGAAAGGATTTGACCTTTG+AGG - chr1_3:19921136-19921155 Msa0108410:intron 35.0%
GAGTCCTTGGATTTACAATT+GGG - chr1_3:19921158-19921177 Msa0108410:CDS 35.0%
ACAACCCAATTGTAAATCCA+AGG + chr1_3:19921165-19921184 None:intergenic 35.0%
! TTACAATTGGGTTGTCAAGA+AGG - chr1_3:19921170-19921189 Msa0108410:CDS 35.0%
TGTAAGCCTTAAGCAAAGAA+GGG - chr1_3:19921208-19921227 Msa0108410:CDS 35.0%
TTCCGAAGAAAATTGTCTCA+TGG - chr1_3:19921231-19921250 Msa0108410:CDS 35.0%
!! CTTAAATGGATTGGTATGAG+TGG - chr1_3:19921438-19921457 Msa0108410:CDS 35.0%
CACGTCTTAGATTATCTGTA+AGG - chr1_3:19921783-19921802 Msa0108410:intron 35.0%
AAGAGCTTCCTGGAAATATA+AGG + chr1_3:19922311-19922330 None:intergenic 35.0%
CTTGATCTTCTTTACTGATG+TGG + chr1_3:19922342-19922361 None:intergenic 35.0%
CTATGTTAGCTGCAGTATTA+TGG - chr1_3:19922374-19922393 Msa0108410:intron 35.0%
TTAGCTGCAGTATTATGGTT+AGG - chr1_3:19922379-19922398 Msa0108410:intron 35.0%
TAGCTGCAGTATTATGGTTA+GGG - chr1_3:19922380-19922399 Msa0108410:intron 35.0%
! CATTTTCAACAGCTTGAACA+TGG + chr1_3:19922438-19922457 None:intergenic 35.0%
TGTTCAAGCTGTTGAAAATG+AGG - chr1_3:19922438-19922457 Msa0108410:intron 35.0%
GTTCAAGCTGTTGAAAATGA+GGG - chr1_3:19922439-19922458 Msa0108410:intron 35.0%
AGCATGCATTCATTCATTAG+AGG + chr1_3:19922481-19922500 None:intergenic 35.0%
GATGTGTTCCTAATTACTCT+TGG - chr1_3:19922513-19922532 Msa0108410:intron 35.0%
GATAATTCACTTCACCATTC+AGG + chr1_3:19922591-19922610 None:intergenic 35.0%
TCGTAAAATGTTAGCTGGTT+AGG - chr1_3:19922629-19922648 Msa0108410:intron 35.0%
TAGAAAGAACAGATGCAACA+TGG - chr1_3:19922653-19922672 Msa0108410:intron 35.0%
AGAAAGAACAGATGCAACAT+GGG - chr1_3:19922654-19922673 Msa0108410:intron 35.0%
TGCGAGAAATAATCGCTTAA+AGG - chr1_3:19922802-19922821 Msa0108410:intron 35.0%
TTTGAATTTCGGCACAAGAT+AGG - chr1_3:19922944-19922963 Msa0108410:intron 35.0%
TCAACTCGCAAAATGAAAGT+TGG - chr1_3:19923257-19923276 Msa0108410:intron 35.0%
CAACTCGCAAAATGAAAGTT+GGG - chr1_3:19923258-19923277 Msa0108410:intron 35.0%
TGACACAATCACAGGTAAAA+TGG - chr1_3:19923303-19923322 Msa0108410:intron 35.0%
! ACAAGGAGTGTGGAATATTA+TGG + chr1_3:19923363-19923382 None:intergenic 35.0%
TCATTATGCTCAAATAGTGG+AGG - chr1_3:19923399-19923418 Msa0108410:intron 35.0%
!!! TTGCCATTTTACAAATCGAC+CGG + chr1_3:19923430-19923449 None:intergenic 35.0%
AATTGATGCAAGAGATGCTT+TGG - chr1_3:19923520-19923539 Msa0108410:intron 35.0%
! TAGAATACTGATTGATCTGC+CGG + chr1_3:19923624-19923643 None:intergenic 35.0%
AATGTGATGTATATCTGCAG+AGG - chr1_3:19923761-19923780 Msa0108410:intron 35.0%
!!! GAAAATGTTTGGCTTTTCCT+AGG + chr1_3:19923953-19923972 None:intergenic 35.0%
ATTGTTCAGAAAAGGGGTAA+GGG + chr1_3:19924095-19924114 None:intergenic 35.0%
! CCCTTTTCTGAACAATCTTT+TGG - chr1_3:19924099-19924118 Msa0108410:intron 35.0%
CCCAAAAGATTGTTCAGAAA+AGG + chr1_3:19924103-19924122 None:intergenic 35.0%
TTTGGGTGCTTGTAATAGAA+TGG - chr1_3:19924117-19924136 Msa0108410:intron 35.0%
TTGAGATGCATAAACGACAA+TGG - chr1_3:19924758-19924777 Msa0108410:intron 35.0%
TTTCTTTCTTCTCCAACATG+AGG - chr1_3:19924783-19924802 Msa0108410:intron 35.0%
AATTGGTGAACTGTAAATGG+AGG - chr1_3:19924816-19924835 Msa0108410:intron 35.0%
TATATATTTGCAGAGACCAC+TGG - chr1_3:19924943-19924962 Msa0108410:intron 35.0%
ATATATTTGCAGAGACCACT+GGG - chr1_3:19924944-19924963 Msa0108410:intron 35.0%
AGCATAATGACACACAGTAA+AGG + chr1_3:19925089-19925108 None:intergenic 35.0%
! TTTACTGTGTGTCATTATGC+TGG - chr1_3:19925088-19925107 Msa0108410:intron 35.0%
AGAACTATCAAACAACAGTC+AGG + chr1_3:19925269-19925288 None:intergenic 35.0%
ATCATATGTGACCTAAGGAA+AGG + chr1_3:19925299-19925318 None:intergenic 35.0%
GTTGTATCATATGTGACCTA+AGG + chr1_3:19925304-19925323 None:intergenic 35.0%
TAGGTCACATATGATACAAC+TGG - chr1_3:19925304-19925323 Msa0108410:CDS 35.0%
AGGTCACATATGATACAACT+GGG - chr1_3:19925305-19925324 Msa0108410:CDS 35.0%
ATATGATACAACTGGGTTTC+TGG - chr1_3:19925312-19925331 Msa0108410:CDS 35.0%
!! TGTTGCAACACTTAGCTTTT+GGG + chr1_3:19925485-19925504 None:intergenic 35.0%
!! TTGTTGCAACACTTAGCTTT+TGG + chr1_3:19925486-19925505 None:intergenic 35.0%
TGTTGTGCATAACTTGGTTT+AGG - chr1_3:19925780-19925799 Msa0108410:intron 35.0%
! TTTTGGTGAGACATTCTTGT+TGG + chr1_3:19926125-19926144 None:intergenic 35.0%
GCTTTGACTACATTTCAGAT+TGG - chr1_3:19926498-19926517 Msa0108410:intron 35.0%
TCTATTCATGCAGTTATTCG+GGG - chr1_3:19926725-19926744 Msa0108410:intron 35.0%
ATGGTAGTAAGAAACAGAAC+AGG - chr1_3:19926827-19926846 Msa0108410:intron 35.0%
TGGTAGTAAGAAACAGAACA+GGG - chr1_3:19926828-19926847 Msa0108410:intron 35.0%
CAAAATGGTAGCATGTATCT+TGG + chr1_3:19926913-19926932 None:intergenic 35.0%
! CAAGATACATGCTACCATTT+TGG - chr1_3:19926911-19926930 Msa0108410:intron 35.0%
!!! TTTTAAGGAATGGGGTATTG+TGG + chr1_3:19927013-19927032 None:intergenic 35.0%
CCCCATTCCTTAAAAAATAC+AGG - chr1_3:19927018-19927037 Msa0108410:intron 35.0%
CTGTCAAATGTGTCATATCA+GGG + chr1_3:19927374-19927393 None:intergenic 35.0%
ACTGTCAAATGTGTCATATC+AGG + chr1_3:19927375-19927394 None:intergenic 35.0%
!! AGTATTGATTACGATATGGG+TGG - chr1_3:19927403-19927422 Msa0108410:intron 35.0%
GAAATTTACCAACAGTATCG+TGG + chr1_3:19927660-19927679 None:intergenic 35.0%
! TATTGGATTTTCGAAACACG+GGG - chr1_3:19927746-19927765 Msa0108410:CDS 35.0%
AGTTTCTGAACTTGAGGAAA+AGG + chr1_3:19927785-19927804 None:intergenic 35.0%
! ATTGTTGGATACGTTGGTTA+AGG + chr1_3:19928025-19928044 None:intergenic 35.0%
CTAGTTTGAGCGTTATAAGT+CGG - chr1_3:19928282-19928301 Msa0108410:intron 35.0%
TTGCTGAAGAATTTGAGCAA+AGG - chr1_3:19928306-19928325 Msa0108410:intron 35.0%
ATCCTGATCAAGAACTTAGA+AGG - chr1_3:19928399-19928418 Msa0108410:intron 35.0%
!!! TTTTATTTCGAGTTCGGCAT+TGG - chr1_3:19928596-19928615 Msa0108410:intron 35.0%
AGTGCATTGCCAACAAAATA+TGG - chr1_3:19928635-19928654 Msa0108410:intron 35.0%
GTGCATTGCCAACAAAATAT+GGG - chr1_3:19928636-19928655 Msa0108410:intron 35.0%
GGTAAAAGAATACGACGTAT+AGG - chr1_3:19928684-19928703 Msa0108410:intron 35.0%
TAGCAAAACTAACACAACAG+TGG + chr1_3:19928736-19928755 None:intergenic 35.0%
TGAAACATGACATAGCTAGC+AGG - chr1_3:19914543-19914562 Msa0108410:three_prime_UTR 40.0%
GAAAACAGAGATGAAGGTGA+TGG + chr1_3:19914730-19914749 None:intergenic 40.0%
!!! GATCGGATACGTTTTAGGTT+TGG - chr1_3:19915149-19915168 Msa0108410:CDS 40.0%
CAAATAAACACGCACACATG+GGG + chr1_3:19915264-19915283 None:intergenic 40.0%
CTCAAATAAACACGCACACA+TGG + chr1_3:19915266-19915285 None:intergenic 40.0%
! ACTAAGTTGAGTCAGCTACA+TGG - chr1_3:19915336-19915355 Msa0108410:CDS 40.0%
AGCCATCGTAATTCCTAGTA+TGG + chr1_3:19915393-19915412 None:intergenic 40.0%
GACTCTACTATCTAGTAGTG+TGG + chr1_3:19915512-19915531 None:intergenic 40.0%
GAGTCTGTATCTTAGAGCTA+TGG - chr1_3:19915527-19915546 Msa0108410:CDS 40.0%
GTGGCAGAGTGAGTTATTTA+AGG - chr1_3:19915693-19915712 Msa0108410:intron 40.0%
!!! CCTCCTGGTTTTAAGGTTAA+CGG - chr1_3:19915771-19915790 Msa0108410:intron 40.0%
TAATCTGACCCGTGATGTAA+TGG - chr1_3:19915794-19915813 Msa0108410:intron 40.0%
ATGGGTTTCCATTACATCAC+GGG + chr1_3:19915805-19915824 None:intergenic 40.0%
CATGGGTTTCCATTACATCA+CGG + chr1_3:19915806-19915825 None:intergenic 40.0%
TCTCAATTTACCGTCTCCAT+GGG + chr1_3:19915823-19915842 None:intergenic 40.0%
TTCTCAATTTACCGTCTCCA+TGG + chr1_3:19915824-19915843 None:intergenic 40.0%
ATTGAAAAGACCCATGACAC+CGG + chr1_3:19915910-19915929 None:intergenic 40.0%
! TGTCATGGGTCTTTTCAATG+AGG - chr1_3:19915911-19915930 Msa0108410:intron 40.0%
AATGAGGACATAGCGTATAG+TGG - chr1_3:19915927-19915946 Msa0108410:intron 40.0%
ACACTGAAACTGATTGGAAG+GGG + chr1_3:19916016-19916035 None:intergenic 40.0%
GACACTGAAACTGATTGGAA+GGG + chr1_3:19916017-19916036 None:intergenic 40.0%
AGACACTGAAACTGATTGGA+AGG + chr1_3:19916018-19916037 None:intergenic 40.0%
!! CTTGAAGGATGCTCTAGAAT+CGG - chr1_3:19916147-19916166 Msa0108410:intron 40.0%
!! CTGAAGCTCTAGGGTTTATT+TGG + chr1_3:19916278-19916297 None:intergenic 40.0%
!! ACTGGTATTCTGAAGCTCTA+GGG + chr1_3:19916287-19916306 None:intergenic 40.0%
CTATAAGACAGATCAGTCAC+TGG + chr1_3:19916305-19916324 None:intergenic 40.0%
!!! GTCAATTTTGGTTGAGTGTC+AGG - chr1_3:19916558-19916577 Msa0108410:intron 40.0%
!! TTTTGGTTGAGTGTCAGGTT+TGG - chr1_3:19916563-19916582 Msa0108410:intron 40.0%
! GTTTGGAACATGTTAGCAGT+CGG - chr1_3:19916580-19916599 Msa0108410:intron 40.0%
AAGAAATGAATGTTGGCGTG+AGG - chr1_3:19916642-19916661 Msa0108410:intron 40.0%
AATCCAGTGGTAAACACTTC+TGG - chr1_3:19916696-19916715 Msa0108410:intron 40.0%
CTGGAGTTTAACCAGAAACA+AGG - chr1_3:19916715-19916734 Msa0108410:intron 40.0%
! CCTGATACTTTCCTTGTTTC+TGG + chr1_3:19916729-19916748 None:intergenic 40.0%
!! CCAGAAACAAGGAAAGTATC+AGG - chr1_3:19916726-19916745 Msa0108410:CDS 40.0%
AGACTACTTCTCCAGAAAAG+TGG + chr1_3:19916770-19916789 None:intergenic 40.0%
!! CTTTTCTGGAGAAGTAGTCT+TGG - chr1_3:19916770-19916789 Msa0108410:CDS 40.0%
GGACTATCAAATGAAAGTCC+AGG + chr1_3:19917049-19917068 None:intergenic 40.0%
!! AAGGTTTGTTAAAGAAGGCG+AGG + chr1_3:19917139-19917158 None:intergenic 40.0%
CGCCTTCTTTAACAAACCTT+TGG - chr1_3:19917139-19917158 Msa0108410:intron 40.0%
TTATCAAAGCCTACACCACT+TGG + chr1_3:19917171-19917190 None:intergenic 40.0%
TCTGTCTTCATGATGCATCA+GGG + chr1_3:19917198-19917217 None:intergenic 40.0%
TTCTGTCTTCATGATGCATC+AGG + chr1_3:19917199-19917218 None:intergenic 40.0%
TATTTCAACTTCCATGGAGG+AGG - chr1_3:19917268-19917287 Msa0108410:CDS 40.0%
GAAGCGATTAAAATTAGGCC+TGG - chr1_3:19917347-19917366 Msa0108410:intron 40.0%
AGACAAACAAGAAAATGGCC+AGG + chr1_3:19917368-19917387 None:intergenic 40.0%
CAACACATATCCTTATGTCG+TGG - chr1_3:19917418-19917437 Msa0108410:intron 40.0%
ATTCTCAGCAGTCAGTAGAA+AGG + chr1_3:19917517-19917536 None:intergenic 40.0%
TTGGAAGTTGAAACCAAGAC+TGG + chr1_3:19917836-19917855 None:intergenic 40.0%
TATTTCATTGCCAGATGGGA+AGG - chr1_3:19917908-19917927 Msa0108410:intron 40.0%
TCCTGATATTCTTGATGGAG+TGG - chr1_3:19918064-19918083 Msa0108410:intron 40.0%
TCCACTCCATCAAGAATATC+AGG + chr1_3:19918068-19918087 None:intergenic 40.0%
CTGTGCAAATCAGACAAAAG+CGG - chr1_3:19918243-19918262 Msa0108410:CDS 40.0%
TGTGCAAATCAGACAAAAGC+GGG - chr1_3:19918244-19918263 Msa0108410:CDS 40.0%
GGATTTACAGCAACCAAAAC+AGG + chr1_3:19918271-19918290 None:intergenic 40.0%
! TTCAGTTGCTTTACGCTTGT+AGG + chr1_3:19918335-19918354 None:intergenic 40.0%
!!! TTTTGAGACTGTCAGATCGT+AGG - chr1_3:19918692-19918711 Msa0108410:intron 40.0%
TGACCTCATTCTTACTTACC+TGG - chr1_3:19918793-19918812 Msa0108410:intron 40.0%
CAACCAGGTAAGTAAGAATG+AGG + chr1_3:19918799-19918818 None:intergenic 40.0%
TTACCTGGTTGACATGTTGA+TGG - chr1_3:19918808-19918827 Msa0108410:intron 40.0%
TATCCATCAACATGTCAACC+AGG + chr1_3:19918814-19918833 None:intergenic 40.0%
GTTACCATCTACGTATTCAG+TGG - chr1_3:19918954-19918973 Msa0108410:intron 40.0%
! CACTAATGTTGTTTGGCATC+TGG - chr1_3:19919537-19919556 Msa0108410:CDS 40.0%
TTCAATGCAATGAAGGGGAA+AGG - chr1_3:19919574-19919593 Msa0108410:CDS 40.0%
TAATTACCTCGAAGAGATGG+TGG + chr1_3:19919636-19919655 None:intergenic 40.0%
CAGTAATTACCTCGAAGAGA+TGG + chr1_3:19919639-19919658 None:intergenic 40.0%
CATCTCTTCGAGGTAATTAC+TGG - chr1_3:19919637-19919656 Msa0108410:intron 40.0%
AGAGAATTACTGTACCAGGT+GGG + chr1_3:19919923-19919942 None:intergenic 40.0%
TAGAGAATTACTGTACCAGG+TGG + chr1_3:19919924-19919943 None:intergenic 40.0%
ATATGTATGCCCTAGCTAGA+GGG - chr1_3:19920052-19920071 Msa0108410:CDS 40.0%
!! TAAGGCCTTATTTCCACTTG+TGG - chr1_3:19920744-19920763 Msa0108410:intron 40.0%
AGTGTGAGGATGATCTTATC+TGG - chr1_3:19920768-19920787 Msa0108410:intron 40.0%
! GTTCTAAGTAGGCTATTGCT+TGG - chr1_3:19920896-19920915 Msa0108410:intron 40.0%
GCAGTTTAGCATGATAACTG+TGG - chr1_3:19920918-19920937 Msa0108410:intron 40.0%
!! CACTTGGAGAGATCGTTTTT+GGG + chr1_3:19920953-19920972 None:intergenic 40.0%
CTGAGCATGGTAATTCACTT+TGG + chr1_3:19921003-19921022 None:intergenic 40.0%
CATAACTGTTCATCTGAGCA+TGG + chr1_3:19921016-19921035 None:intergenic 40.0%
TAAATCCAAGGACTCCTCAA+AGG + chr1_3:19921153-19921172 None:intergenic 40.0%
GGAGTCCTTGGATTTACAAT+TGG - chr1_3:19921157-19921176 Msa0108410:CDS 40.0%
! ATTGGGTTGTCAAGAAGGAA+TGG - chr1_3:19921175-19921194 Msa0108410:CDS 40.0%
GTGTAAGCCTTAAGCAAAGA+AGG - chr1_3:19921207-19921226 Msa0108410:CDS 40.0%
GTAACACCATCTCTCAATCT+AGG + chr1_3:19921392-19921411 None:intergenic 40.0%
!! TAACTTGCTTGCAATACAGC+TGG - chr1_3:19921701-19921720 Msa0108410:intron 40.0%
TGATGCAGAAGAATTTCGCA+TGG - chr1_3:19922163-19922182 Msa0108410:intron 40.0%
AGAAGAATTTCGCATGGTCA+TGG - chr1_3:19922169-19922188 Msa0108410:intron 40.0%
! TGAACTTGTTCCATGATGCA+TGG - chr1_3:19922565-19922584 Msa0108410:intron 40.0%
TAGCATGATCATAGAGGCTT+TGG + chr1_3:19922886-19922905 None:intergenic 40.0%
! TTGGGAAAAAGGTTTTCTGC+TGG - chr1_3:19923030-19923049 Msa0108410:intron 40.0%
TTACATGTCGCCGAATTGAT+TGG - chr1_3:19923203-19923222 Msa0108410:intron 40.0%
AACGTCACAGCCAATCAATT+CGG + chr1_3:19923216-19923235 None:intergenic 40.0%
! CCTGTGATTGTGTCAACTTT+TGG + chr1_3:19923298-19923317 None:intergenic 40.0%
CCAAAAGTTGACACAATCAC+AGG - chr1_3:19923295-19923314 Msa0108410:intron 40.0%
! ATGCTCAAATAGTGGAGGTT+AGG - chr1_3:19923404-19923423 Msa0108410:intron 40.0%
TTCATGCCTGTTTGATTGGT+TGG - chr1_3:19923556-19923575 Msa0108410:intron 40.0%
TTAGAGCCTTCAGTTTCAGT+GGG + chr1_3:19923882-19923901 None:intergenic 40.0%
! TTTAGAGCCTTCAGTTTCAG+TGG + chr1_3:19923883-19923902 None:intergenic 40.0%
GATTGTTCAGAAAAGGGGTA+AGG + chr1_3:19924096-19924115 None:intergenic 40.0%
GACATGCTAACTAACTACGT+TGG + chr1_3:19924252-19924271 None:intergenic 40.0%
GAAATCAATGAACCGTTGCT+TGG - chr1_3:19924367-19924386 Msa0108410:intron 40.0%
!! GGTTTTGTCTAAATAGTGGG+TGG - chr1_3:19924461-19924480 Msa0108410:intron 40.0%
ACGCACAAATCAGAGACTTT+AGG - chr1_3:19924628-19924647 Msa0108410:intron 40.0%
TTAACCACAGTACCTCATGT+TGG + chr1_3:19924798-19924817 None:intergenic 40.0%
!! CATGAGGTACTGTGGTTAAT+TGG - chr1_3:19924799-19924818 Msa0108410:intron 40.0%
!! GTAAATGGAGGAGTTTGTTG+TGG - chr1_3:19924828-19924847 Msa0108410:intron 40.0%
TATATTTGCAGAGACCACTG+GGG - chr1_3:19924945-19924964 Msa0108410:intron 40.0%
ATCTGTACCATTTGGGAAAG+TGG + chr1_3:19924996-19925015 None:intergenic 40.0%
AATGACACACAGTAAAGGCT+TGG + chr1_3:19925084-19925103 None:intergenic 40.0%
ACTAGTCACCCTCTTCTTTA+AGG + chr1_3:19925224-19925243 None:intergenic 40.0%
TTAAAGAAGAGGGTGACTAG+TGG - chr1_3:19925223-19925242 Msa0108410:CDS 40.0%
CTATCAAACAACAGTCAGGT+AGG + chr1_3:19925265-19925284 None:intergenic 40.0%
! TGGGTTTCTGGAGAAGAATA+GGG - chr1_3:19925324-19925343 Msa0108410:CDS 40.0%
TTGTGTAAAGGACCAACTAC+TGG + chr1_3:19925445-19925464 None:intergenic 40.0%
! TGATGAGACAGCCTATTTTC+CGG + chr1_3:19925671-19925690 None:intergenic 40.0%
TCAGGCGATTGGAGATTATT+GGG + chr1_3:19926020-19926039 None:intergenic 40.0%
TTCAGGCGATTGGAGATTAT+TGG + chr1_3:19926021-19926040 None:intergenic 40.0%
AGTCCTTGTTCATACGTTTC+AGG + chr1_3:19926038-19926057 None:intergenic 40.0%
GTGGTTCGAATATCAAGATC+CGG - chr1_3:19926095-19926114 Msa0108410:intron 40.0%
AGACATTCTTGTTGGAAAGC+CGG + chr1_3:19926117-19926136 None:intergenic 40.0%
! TATACCTTCTGGCGAACTTT+TGG + chr1_3:19926142-19926161 None:intergenic 40.0%
TAGACAAAAGAAAACCACCG+TGG + chr1_3:19926233-19926252 None:intergenic 40.0%
! TTGCCTGAGATGTTTCAAGT+TGG - chr1_3:19926368-19926387 Msa0108410:intron 40.0%
TAGCCAACTTGAAACATCTC+AGG + chr1_3:19926374-19926393 None:intergenic 40.0%
!!! GTTATTTTTCAGAACAGGGC+AGG - chr1_3:19926400-19926419 Msa0108410:intron 40.0%
! TACGTGTCCAAAGTTGCTTT+AGG - chr1_3:19926562-19926581 Msa0108410:intron 40.0%
! ACGTGTCCAAAGTTGCTTTA+GGG - chr1_3:19926563-19926582 Msa0108410:intron 40.0%
TCCTTCTTGAAGCTTCTTGA+GGG + chr1_3:19926607-19926626 None:intergenic 40.0%
TTCCTTCTTGAAGCTTCTTG+AGG + chr1_3:19926608-19926627 None:intergenic 40.0%
GCTACAGTTGTCATACAATC+AGG - chr1_3:19926863-19926882 Msa0108410:intron 40.0%
GAATGAGTCAGAAATGTCGA+TGG - chr1_3:19927283-19927302 Msa0108410:intron 40.0%
ATACACTCTCGATATGCTGT+TGG + chr1_3:19927324-19927343 None:intergenic 40.0%
AGCTACTCTTTGCAGTCATT+CGG - chr1_3:19927694-19927713 Msa0108410:CDS 40.0%
AGAAGATGCTCAGGAGATAT+TGG - chr1_3:19927729-19927748 Msa0108410:CDS 40.0%
TCTCGTATTGTTGGATACGT+TGG + chr1_3:19928031-19928050 None:intergenic 40.0%
TCCAACAATACGAGAACAGA+TGG - chr1_3:19928036-19928055 Msa0108410:intron 40.0%
ACCATCTGTTCTCGTATTGT+TGG + chr1_3:19928040-19928059 None:intergenic 40.0%
! CGAGTTGAAGATGAAATCCA+TGG - chr1_3:19928067-19928086 Msa0108410:intron 40.0%
TGTCAGAGTCATCAATAGCA+AGG + chr1_3:19928154-19928173 None:intergenic 40.0%
! ATCTTGTTCCGTTGCTTTCT+TGG + chr1_3:19928253-19928272 None:intergenic 40.0%
GAGCAAAGGAGTCAAGTATT+TGG - chr1_3:19928320-19928339 Msa0108410:intron 40.0%
AGCCTTCTAAGTTCTTGATC+AGG + chr1_3:19928404-19928423 None:intergenic 40.0%
GAAGCTTGGAAAAGGGATTA+CGG - chr1_3:19928437-19928456 Msa0108410:intron 40.0%
AAGCTTGGAAAAGGGATTAC+GGG - chr1_3:19928438-19928457 Msa0108410:intron 40.0%
CAGCCTCTTGCAAAAATACT+TGG - chr1_3:19928773-19928792 Msa0108410:five_prime_UTR 40.0%
TCGTTGTTGTAACAACCCAG+TGG + chr1_3:19915299-19915318 None:intergenic 45.0%
TAGGAATTACGATGGCTCAG+TGG - chr1_3:19915396-19915415 Msa0108410:CDS 45.0%
AGGAATTACGATGGCTCAGT+GGG - chr1_3:19915397-19915416 Msa0108410:CDS 45.0%
GATTTGATAGGCTGGAGAGA+AGG + chr1_3:19915747-19915766 None:intergenic 45.0%
!!! ATCGTTGCCTCCTGGTTTTA+AGG - chr1_3:19915764-19915783 Msa0108410:intron 45.0%
CCGTTAACCTTAAAACCAGG+AGG + chr1_3:19915774-19915793 None:intergenic 45.0%
! CGTGATGTAATGGAAACCCA+TGG - chr1_3:19915804-19915823 Msa0108410:intron 45.0%
! GTAATGGAAACCCATGGAGA+CGG - chr1_3:19915810-19915829 Msa0108410:intron 45.0%
CGGTAAATTGAGAAGCAGTG+TGG - chr1_3:19915830-19915849 Msa0108410:intron 45.0%
AAATTGAGAAGCAGTGTGGC+TGG - chr1_3:19915834-19915853 Msa0108410:CDS 45.0%
! CAGTGTCTTCTAGGGAATCT+AGG - chr1_3:19916030-19916049 Msa0108410:intron 45.0%
! TGTCTTCTAGGGAATCTAGG+TGG - chr1_3:19916033-19916052 Msa0108410:intron 45.0%
!! CGATTCTAGAGCATCCTTCA+AGG + chr1_3:19916149-19916168 None:intergenic 45.0%
!! CACTGGTATTCTGAAGCTCT+AGG + chr1_3:19916288-19916307 None:intergenic 45.0%
CACGACTTAAGAACCAGTGA+TGG + chr1_3:19916338-19916357 None:intergenic 45.0%
GTGTTGTCTAGCAGCATTAG+AGG - chr1_3:19916359-19916378 Msa0108410:intron 45.0%
!! ACTCCAGAAGTGTTTACCAC+TGG + chr1_3:19916702-19916721 None:intergenic 45.0%
GTTGCTCACACTCTCACTTT+GGG + chr1_3:19916908-19916927 None:intergenic 45.0%
TACACAGCGACAAGTTAGTG+TGG + chr1_3:19916930-19916949 None:intergenic 45.0%
TTCCTAAGTCACAGTCACAC+TGG - chr1_3:19917091-19917110 Msa0108410:intron 45.0%
ATCCAGTGTGACTGTGACTT+AGG + chr1_3:19917096-19917115 None:intergenic 45.0%
TAAGTCACAGTCACACTGGA+TGG - chr1_3:19917095-19917114 Msa0108410:intron 45.0%
!! AACCTTTGGAGCAAACCAAG+TGG - chr1_3:19917153-19917172 Msa0108410:intron 45.0%
TGTCTTCATGATGCATCAGG+GGG + chr1_3:19917196-19917215 None:intergenic 45.0%
CTGTCTTCATGATGCATCAG+GGG + chr1_3:19917197-19917216 None:intergenic 45.0%
TCCAAATGGGAATTGGGAGT+TGG - chr1_3:19917851-19917870 Msa0108410:intron 45.0%
TGCACAGTCTCACATTCTCT+GGG - chr1_3:19917993-19918012 Msa0108410:intron 45.0%
GTGCAAATCAGACAAAAGCG+GGG - chr1_3:19918245-19918264 Msa0108410:CDS 45.0%
ACCTCGTATCATTTCTCGGA+TGG + chr1_3:19918389-19918408 None:intergenic 45.0%
CTCACCACTGAATACGTAGA+TGG + chr1_3:19918961-19918980 None:intergenic 45.0%
TACGTATTCAGTGGTGAGAG+TGG - chr1_3:19918963-19918982 Msa0108410:intron 45.0%
GATAGCAATGCAGTACTTGG+CGG - chr1_3:19919010-19919029 Msa0108410:intron 45.0%
GAGATTCACTTCAGCGAAAC+TGG - chr1_3:19919273-19919292 Msa0108410:intron 45.0%
!! AAAACTGTTGATGGCAGGCA+AGG + chr1_3:19919448-19919467 None:intergenic 45.0%
!! CAAGCAAAACTGTTGATGGC+AGG + chr1_3:19919453-19919472 None:intergenic 45.0%
TGGATTGTGCTCAGACATTC+CGG - chr1_3:19919875-19919894 Msa0108410:intron 45.0%
CTCTTCGAGGTTCTCAAACT+CGG - chr1_3:19920017-19920036 Msa0108410:CDS 45.0%
GATATGTATGCCCTAGCTAG+AGG - chr1_3:19920051-19920070 Msa0108410:CDS 45.0%
TATGTATGCCCTAGCTAGAG+GGG - chr1_3:19920053-19920072 Msa0108410:CDS 45.0%
! GATTGGTTGTGATTCTCTGG+CGG - chr1_3:19920659-19920678 Msa0108410:intron 45.0%
CACTGCCACAAGTGGAAATA+AGG + chr1_3:19920752-19920771 None:intergenic 45.0%
GTGAGGATGATCTTATCTGG+TGG - chr1_3:19920771-19920790 Msa0108410:intron 45.0%
! TGGTGGTGATTCTGACTAAC+AGG - chr1_3:19920788-19920807 Msa0108410:intron 45.0%
! GCACTTGGAGAGATCGTTTT+TGG + chr1_3:19920954-19920973 None:intergenic 45.0%
TTGGGTCATTGATGTGCACT+TGG + chr1_3:19920969-19920988 None:intergenic 45.0%
TTGTTGCAGACTTGTAGAGC+CGG + chr1_3:19921073-19921092 None:intergenic 45.0%
CTGCAATGCTGTCCAAAGAA+AGG - chr1_3:19921121-19921140 Msa0108410:intron 45.0%
! TTTGACCTTTGAGGAGTCCT+TGG - chr1_3:19921145-19921164 Msa0108410:intron 45.0%
TCGGAACCCTTCTTTGCTTA+AGG + chr1_3:19921217-19921236 None:intergenic 45.0%
CGCTTCTACTCAAGCTTCTA+AGG - chr1_3:19921346-19921365 Msa0108410:intron 45.0%
CCATCTCTCAATCTAGGTGA+CGG + chr1_3:19921386-19921405 None:intergenic 45.0%
! GTGGCAGTGATTGCTAGTTT+AGG - chr1_3:19921457-19921476 Msa0108410:CDS 45.0%
!! TGGGGAATACCGTTGATTCT+TGG - chr1_3:19921521-19921540 Msa0108410:intron 45.0%
GGCATCTCACCAAGAATCAA+CGG + chr1_3:19921533-19921552 None:intergenic 45.0%
TTCTCGCAAGCTTGTCAAGA+TGG + chr1_3:19922790-19922809 None:intergenic 45.0%
TTAGAGGAACGGGAATGACA+AGG + chr1_3:19922922-19922941 None:intergenic 45.0%
AATTTCGGCACAAGATAGGC+TGG - chr1_3:19922948-19922967 Msa0108410:intron 45.0%
! TCAAATAGTGGAGGTTAGGC+CGG - chr1_3:19923408-19923427 Msa0108410:intron 45.0%
!! AGGCCGGTCGATTTGTAAAA+TGG - chr1_3:19923424-19923443 Msa0108410:intron 45.0%
GCTCAACCAACCAATCAAAC+AGG + chr1_3:19923565-19923584 None:intergenic 45.0%
TAGAGCCTTCAGTTTCAGTG+GGG + chr1_3:19923881-19923900 None:intergenic 45.0%
GAATGGCTGTAATGCGTAAG+TGG - chr1_3:19924134-19924153 Msa0108410:intron 45.0%
ATTCCATCAATGTGTCAGCC+AGG - chr1_3:19924423-19924442 Msa0108410:intron 45.0%
! ACCTTTTCTACAACAGTGCC+TGG + chr1_3:19924444-19924463 None:intergenic 45.0%
!! TTCTCCAACATGAGGTACTG+TGG - chr1_3:19924791-19924810 Msa0108410:intron 45.0%
CACATCAAGGAATATAGCCG+TGG + chr1_3:19924857-19924876 None:intergenic 45.0%
! AGTGGACTCTTCATCTAGCA+GGG + chr1_3:19924978-19924997 None:intergenic 45.0%
! AAGTGGACTCTTCATCTAGC+AGG + chr1_3:19924979-19924998 None:intergenic 45.0%
GAAGAGTCCACTTTCCCAAA+TGG - chr1_3:19924986-19925005 Msa0108410:intron 45.0%
! TGTGTGTCATTATGCTGGAG+AGG - chr1_3:19925093-19925112 Msa0108410:intron 45.0%
! CTGGGTTTCTGGAGAAGAAT+AGG - chr1_3:19925323-19925342 Msa0108410:CDS 45.0%
GTATGGAATCCAAGTGCAAC+AGG + chr1_3:19925351-19925370 None:intergenic 45.0%
GCACGAGGATAGAAGTTGTA+TGG + chr1_3:19925368-19925387 None:intergenic 45.0%
CAGTCTGAAAAGCCAGTAGT+TGG - chr1_3:19925430-19925449 Msa0108410:intron 45.0%
GTTGGTCCTTTACACAAGTC+AGG - chr1_3:19925448-19925467 Msa0108410:CDS 45.0%
GTCCTTTACACAAGTCAGGT+GGG - chr1_3:19925452-19925471 Msa0108410:CDS 45.0%
TCCTTTACACAAGTCAGGTG+GGG - chr1_3:19925453-19925472 Msa0108410:CDS 45.0%
TTCGCTTACTGCCGGAAAAT+AGG - chr1_3:19925657-19925676 Msa0108410:intron 45.0%
! TTTTTCCTCCATTGGCATGC+AGG - chr1_3:19925929-19925948 Msa0108410:intron 45.0%
! TTTTCCTCCATTGGCATGCA+GGG - chr1_3:19925930-19925949 Msa0108410:intron 45.0%
! TCTCTAAGCGTTGCATCAGT+TGG + chr1_3:19925965-19925984 None:intergenic 45.0%
GTTCATACGTTTCAGGCGAT+TGG + chr1_3:19926031-19926050 None:intergenic 45.0%
TCGCCTGAAACGTATGAACA+AGG - chr1_3:19926032-19926051 Msa0108410:intron 45.0%
GACTTGTACTACAACAGCTG+AGG - chr1_3:19926054-19926073 Msa0108410:intron 45.0%
!! AGGTGGTGGAAGTAATCGAA+AGG + chr1_3:19926192-19926211 None:intergenic 45.0%
AAGAAAACCACCGTGGAAGA+GGG + chr1_3:19926226-19926245 None:intergenic 45.0%
AAAGAAAACCACCGTGGAAG+AGG + chr1_3:19926227-19926246 None:intergenic 45.0%
TCGGTGTGCCAAATCAGATA+CGG - chr1_3:19926272-19926291 Msa0108410:intron 45.0%
GGAGAAAGCCGTATCTGATT+TGG + chr1_3:19926283-19926302 None:intergenic 45.0%
CCTGTGATGCAGCATTATCA+AGG + chr1_3:19926304-19926323 None:intergenic 45.0%
!! CCTTGATAATGCTGCATCAC+AGG - chr1_3:19926301-19926320 Msa0108410:intron 45.0%
GACACGTAAGATGCCATGAA+GGG + chr1_3:19926550-19926569 None:intergenic 45.0%
! CGTGTCCAAAGTTGCTTTAG+GGG - chr1_3:19926564-19926583 Msa0108410:intron 45.0%
GGTAACCCCTAAAGCAACTT+TGG + chr1_3:19926572-19926591 None:intergenic 45.0%
TCCCTCAAGAAGCTTCAAGA+AGG - chr1_3:19926603-19926622 Msa0108410:intron 45.0%
ACAGAAGCGGACAAAAGCAA+TGG - chr1_3:19926808-19926827 Msa0108410:intron 45.0%
CAACAGTATCGTGGAAAGAC+AGG + chr1_3:19927651-19927670 None:intergenic 45.0%
CTGTCTTTCCACGATACTGT+TGG - chr1_3:19927649-19927668 Msa0108410:CDS 45.0%
GCTACTCTTTGCAGTCATTC+GGG - chr1_3:19927695-19927714 Msa0108410:CDS 45.0%
CTACTCTTTGCAGTCATTCG+GGG - chr1_3:19927696-19927715 Msa0108410:CDS 45.0%
TCCGAAACAGACAACAGAGT+CGG - chr1_3:19927902-19927921 Msa0108410:intron 45.0%
TCCGACTCTGTTGTCTGTTT+CGG + chr1_3:19927906-19927925 None:intergenic 45.0%
AACAGAGTCGGATGAGATTC+TGG - chr1_3:19927914-19927933 Msa0108410:intron 45.0%
TCTGGTCAAGTCATCTTTCC+TGG - chr1_3:19927932-19927951 Msa0108410:intron 45.0%
TTTCTCTCTCAGAGCAGCTT+CGG + chr1_3:19927985-19928004 None:intergenic 45.0%
!! TGCTCTGAGAGAGAAAGATG+AGG - chr1_3:19927989-19928008 Msa0108410:intron 45.0%
TGAAATCCATGGAAGACGTG+TGG - chr1_3:19928078-19928097 Msa0108410:intron 45.0%
AGCAAGGCTCTTCTTAGCAA+TGG + chr1_3:19928138-19928157 None:intergenic 45.0%
AGCTTGGAAAAGGGATTACG+GGG - chr1_3:19928439-19928458 Msa0108410:intron 45.0%
! AGAAAAAGTGGTGGGGAAGA+AGG - chr1_3:19928531-19928550 Msa0108410:intron 45.0%
GGGGAAGAAGGAATAGTACA+AGG - chr1_3:19928543-19928562 Msa0108410:intron 45.0%
CGACGTATAGGAAAAGTCCA+CGG - chr1_3:19928696-19928715 Msa0108410:intron 45.0%
TGGTTGAATAACTTCGTCCG+TGG + chr1_3:19928716-19928735 None:intergenic 45.0%
!!! TCAATAATAATTTATTTTTT+TGG - chr1_3:19921661-19921680 Msa0108410:intron 5.0%
!!! AAATAATTTAAAATTTAAAC+AGG + chr1_3:19923732-19923751 None:intergenic 5.0%
!!! GTTTAAATTTTAAATTATTT+TGG - chr1_3:19923732-19923751 Msa0108410:intron 5.0%
CAAGATTCCGGGTTTGATCC+CGG - chr1_3:19915220-19915239 Msa0108410:CDS 50.0%
AAGATTCCGGGTTTGATCCC+GGG - chr1_3:19915221-19915240 Msa0108410:CDS 50.0%
ATAAACACGCACACATGGGG+AGG + chr1_3:19915261-19915280 None:intergenic 50.0%
GAGGCAACGATTTGATAGGC+TGG + chr1_3:19915755-19915774 None:intergenic 50.0%
CCAGGAGGCAACGATTTGAT+AGG + chr1_3:19915759-19915778 None:intergenic 50.0%
CCTATCAAATCGTTGCCTCC+TGG - chr1_3:19915756-19915775 Msa0108410:intron 50.0%
GAAGAAGCTCAAGATCGTGC+CGG - chr1_3:19915888-19915907 Msa0108410:intron 50.0%
GAAACTGATTGGAAGGGGAG+TGG + chr1_3:19916011-19916030 None:intergenic 50.0%
GGTTGCTCACACTCTCACTT+TGG + chr1_3:19916909-19916928 None:intergenic 50.0%
CCAGGCTATCCATCACAACA+AGG + chr1_3:19917031-19917050 None:intergenic 50.0%
!! CCTTGTTGTGATGGATAGCC+TGG - chr1_3:19917028-19917047 Msa0108410:CDS 50.0%
GTTAAAGAAGGCGAGGCCAT+GGG + chr1_3:19917132-19917151 None:intergenic 50.0%
TGTTAAAGAAGGCGAGGCCA+TGG + chr1_3:19917133-19917152 None:intergenic 50.0%
!! CACCACTTGGTTTGCTCCAA+AGG + chr1_3:19917158-19917177 None:intergenic 50.0%
TGGAGCAAACCAAGTGGTGT+AGG - chr1_3:19917159-19917178 Msa0108410:intron 50.0%
GCCAACTCCCAATTCCCATT+TGG + chr1_3:19917855-19917874 None:intergenic 50.0%
CTGCACAGTCTCACATTCTC+TGG - chr1_3:19917992-19918011 Msa0108410:intron 50.0%
GCCATCCGAGAAATGATACG+AGG - chr1_3:19918385-19918404 Msa0108410:intron 50.0%
! TAGAGGGAGCAAAGGCACAT+TGG + chr1_3:19919364-19919383 None:intergenic 50.0%
ATGTATGCCCTAGCTAGAGG+GGG - chr1_3:19920054-19920073 Msa0108410:CDS 50.0%
TTTCCACTTGTGGCAGTGTG+AGG - chr1_3:19920754-19920773 Msa0108410:intron 50.0%
GAGCCGGCATCACTATATGT+TGG + chr1_3:19921057-19921076 None:intergenic 50.0%
GGGTTGTCAAGAAGGAATGG+TGG - chr1_3:19921178-19921197 Msa0108410:CDS 50.0%
CCGTCACCTAGATTGAGAGA+TGG - chr1_3:19921383-19921402 Msa0108410:intron 50.0%
GGACAACATCAAGAGCTTCC+TGG + chr1_3:19922321-19922340 None:intergenic 50.0%
TCCATGATGCATGGCCTGAA+TGG - chr1_3:19922574-19922593 Msa0108410:intron 50.0%
ACCATTCAGGCCATGCATCA+TGG + chr1_3:19922578-19922597 None:intergenic 50.0%
CGCAAGCTTGTCAAGATGGT+TGG + chr1_3:19922786-19922805 None:intergenic 50.0%
GCTGTTGGCAAAAGACGAAC+CGG - chr1_3:19923602-19923621 Msa0108410:intron 50.0%
ATGCACCCCACTGAAACTGA+AGG - chr1_3:19923873-19923892 Msa0108410:intron 50.0%
ACCGTTGCTTGGCATATCTG+TGG - chr1_3:19924378-19924397 Msa0108410:intron 50.0%
GCCACAGATATGCCAAGCAA+CGG + chr1_3:19924382-19924401 None:intergenic 50.0%
! GCCAGGCACTGTTGTAGAAA+AGG - chr1_3:19924440-19924459 Msa0108410:intron 50.0%
!! GGAGTTTGTTGTGGCAACCA+CGG - chr1_3:19924837-19924856 Msa0108410:intron 50.0%
AGCAGGGATAATAACCCCAG+TGG + chr1_3:19924962-19924981 None:intergenic 50.0%
GAATAGGGACCTGTTGCACT+TGG - chr1_3:19925339-19925358 Msa0108410:intron 50.0%
AGGAAGATGACATGTGCACG+AGG + chr1_3:19925383-19925402 None:intergenic 50.0%
GGTCCTTTACACAAGTCAGG+TGG - chr1_3:19925451-19925470 Msa0108410:CDS 50.0%
!! TACAACAGCTGAGGTGCTGT+GGG - chr1_3:19926063-19926082 Msa0108410:intron 50.0%
CTCACCAAAAGTTCGCCAGA+AGG - chr1_3:19926135-19926154 Msa0108410:intron 50.0%
AGAAAACCACCGTGGAAGAG+GGG + chr1_3:19926225-19926244 None:intergenic 50.0%
GGACACGTAAGATGCCATGA+AGG + chr1_3:19926551-19926570 None:intergenic 50.0%
TCGGGGACAGAAAACGAGAA+AGG - chr1_3:19926742-19926761 Msa0108410:intron 50.0%
TCTTTGCAGTCATTCGGGGA+TGG - chr1_3:19927700-19927719 Msa0108410:CDS 50.0%
! TGGTTGGTCAGAAGATGCTC+AGG - chr1_3:19927720-19927739 Msa0108410:CDS 50.0%
TTCGAAACACGGGGACATGA+AGG - chr1_3:19927755-19927774 Msa0108410:CDS 50.0%
TTTCTGCCACACGTCTTCCA+TGG + chr1_3:19928087-19928106 None:intergenic 50.0%
GGCTCTTCTTAGCAATGGAG+AGG + chr1_3:19928133-19928152 None:intergenic 50.0%
CGATGAGCGTGATTACAGCT+GGG - chr1_3:19928205-19928224 Msa0108410:intron 50.0%
CGTGATTACAGCTGGGATGT+GGG - chr1_3:19928212-19928231 Msa0108410:intron 50.0%
GGGATGTGGGAAGTAATCAC+AGG - chr1_3:19928225-19928244 Msa0108410:intron 50.0%
CATGACATAGCTAGCAGGCG+TGG - chr1_3:19914548-19914567 Msa0108410:three_prime_UTR 55.0%
ACATAGCTAGCAGGCGTGGT+TGG - chr1_3:19914552-19914571 Msa0108410:three_prime_UTR 55.0%
TGGAAACCCGGGATCAAACC+CGG + chr1_3:19915230-19915249 None:intergenic 55.0%
TTACGATGGCTCAGTGGGAG+TGG - chr1_3:19915402-19915421 Msa0108410:CDS 55.0%
TACGATGGCTCAGTGGGAGT+GGG - chr1_3:19915403-19915422 Msa0108410:CDS 55.0%
! TCAAGATCGTGCCGGTGTCA+TGG - chr1_3:19915896-19915915 Msa0108410:intron 55.0%
!! CAAGATCGTGCCGGTGTCAT+GGG - chr1_3:19915897-19915916 Msa0108410:intron 55.0%
! GATGGCTAGCCAAAGACCCA+TGG - chr1_3:19917113-19917132 Msa0108410:intron 55.0%
CATGGAGGAGGCTTAGTCCA+GGG - chr1_3:19917280-19917299 Msa0108410:CDS 55.0%
! GACAAAAGCGGGGCCTGTTT+TGG - chr1_3:19918255-19918274 Msa0108410:CDS 55.0%
TTCAGTGGTGAGAGTGGAGC+TGG - chr1_3:19918969-19918988 Msa0108410:intron 55.0%
TCAGTGGTGAGAGTGGAGCT+GGG - chr1_3:19918970-19918989 Msa0108410:intron 55.0%
ATGCAGTACTTGGCGGCTCT+TGG - chr1_3:19919017-19919036 Msa0108410:intron 55.0%
! TCGAAGAGATGGTGGTGCAC+CGG + chr1_3:19919628-19919647 None:intergenic 55.0%
TGTATGCCCTAGCTAGAGGG+GGG - chr1_3:19920055-19920074 Msa0108410:CDS 55.0%
TCAACACCCCCCTCTAGCTA+GGG + chr1_3:19920064-19920083 None:intergenic 55.0%
TTCAACACCCCCCTCTAGCT+AGG + chr1_3:19920065-19920084 None:intergenic 55.0%
CATCCTCACACTGCCACAAG+TGG + chr1_3:19920760-19920779 None:intergenic 55.0%
GTGCCTGGCTGACACATTGA+TGG + chr1_3:19924429-19924448 None:intergenic 55.0%
! GCCCCACCTGACTTGTGTAA+AGG + chr1_3:19925457-19925476 None:intergenic 55.0%
CAACTGACCCTGCATGCCAA+TGG + chr1_3:19925940-19925959 None:intergenic 55.0%
!! CTACAACAGCTGAGGTGCTG+TGG - chr1_3:19926062-19926081 Msa0108410:intron 55.0%
!! ACAACAGCTGAGGTGCTGTG+GGG - chr1_3:19926064-19926083 Msa0108410:intron 55.0%
GAAAACCACCGTGGAAGAGG+GGG + chr1_3:19926224-19926243 None:intergenic 55.0%
TCTTGAGGGAACGACGAGCT+TGG + chr1_3:19926593-19926612 None:intergenic 55.0%
TGCAGTCATTCGGGGATGGT+TGG - chr1_3:19927704-19927723 Msa0108410:CDS 55.0%
! ATTGCAGCGCCGGGTACTTA+AGG - chr1_3:19927959-19927978 Msa0108410:intron 55.0%
CAGCTTCGGCCTTAAGTACC+CGG + chr1_3:19927971-19927990 None:intergenic 55.0%
GCGATGAGCGTGATTACAGC+TGG - chr1_3:19928204-19928223 Msa0108410:intron 55.0%
GCGTGATTACAGCTGGGATG+TGG - chr1_3:19928211-19928230 Msa0108410:intron 55.0%
CACAGGCGCCAAGAAAGCAA+CGG - chr1_3:19928242-19928261 Msa0108410:intron 55.0%
GGAAAAGGGATTACGGGGCA+AGG - chr1_3:19928444-19928463 Msa0108410:intron 55.0%
! AGGCGGAAGTGTGGAAACCC+GGG + chr1_3:19915241-19915260 None:intergenic 60.0%
! GAGGCGGAAGTGTGGAAACC+CGG + chr1_3:19915242-19915261 None:intergenic 60.0%
AACACGCACACATGGGGAGG+CGG + chr1_3:19915258-19915277 None:intergenic 60.0%
AAGGCGAGGCCATGGGTCTT+TGG + chr1_3:19917125-19917144 None:intergenic 60.0%
CCTGGACTAAGCCTCCTCCA+TGG + chr1_3:19917282-19917301 None:intergenic 60.0%
CCATGGAGGAGGCTTAGTCC+AGG - chr1_3:19917279-19917298 Msa0108410:CDS 60.0%
CAGTACTTGGCGGCTCTTGG+AGG - chr1_3:19919020-19919039 Msa0108410:intron 60.0%
TACTTGGCGGCTCTTGGAGG+TGG - chr1_3:19919023-19919042 Msa0108410:intron 60.0%
GGTGCACCACCATCTCTTCG+AGG - chr1_3:19919627-19919646 Msa0108410:intron 60.0%
CTGACCCTGCATGCCAATGG+AGG + chr1_3:19925937-19925956 None:intergenic 60.0%
AGAGGGGGATGTGGTGTAGG+TGG + chr1_3:19926209-19926228 None:intergenic 60.0%
GGAAGAGGGGGATGTGGTGT+AGG + chr1_3:19926212-19926231 None:intergenic 60.0%
CACCACATCCCCCTCTTCCA+CGG - chr1_3:19926213-19926232 Msa0108410:intron 60.0%
TCCTGGCTGAATTGCAGCGC+CGG - chr1_3:19927949-19927968 Msa0108410:intron 60.0%
CACATGGGGAGGCGGAAGTG+TGG + chr1_3:19915250-19915269 None:intergenic 65.0%
GCGGCTCTTGGAGGTGGAAG+TGG - chr1_3:19919029-19919048 Msa0108410:intron 65.0%
!! GTGCTGTGGGGTGCTGGAAG+TGG - chr1_3:19926076-19926095 Msa0108410:intron 65.0%
GGGGGATGTGGTGTAGGTGG+TGG + chr1_3:19926206-19926225 None:intergenic 65.0%
CACCGTGGAAGAGGGGGATG+TGG + chr1_3:19926218-19926237 None:intergenic 65.0%
CACATCCCCCTCTTCCACGG+TGG - chr1_3:19926216-19926235 Msa0108410:intron 65.0%
CCTGGCTGAATTGCAGCGCC+GGG - chr1_3:19927950-19927969 Msa0108410:intron 65.0%
TGGCTCAGTGGGAGTGGGCG+AGG - chr1_3:19915408-19915427 Msa0108410:CDS 70.0%
!! GCTGAGGTGCTGTGGGGTGC+TGG - chr1_3:19926070-19926089 Msa0108410:intron 70.0%
CCCGGCGCTGCAATTCAGCC+AGG + chr1_3:19927953-19927972 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 19914543 19929067 19914543 ID=Msa0108410;Name=Msa0108410
chr1_3 mRNA 19914543 19929067 19914543 ID=Msa0108410-mRNA-1;Parent=Msa0108410;Name=Msa0108410-mRNA-1;_AED=0.12;_eAED=0.12;_QI=320|1|1|1|0.95|0.91|24|493|1171
chr1_3 exon 19914543 19915698 19914543 ID=Msa0108410-mRNA-1:exon:7220;Parent=Msa0108410-mRNA-1
chr1_3 exon 19915834 19915901 19915834 ID=Msa0108410-mRNA-1:exon:7219;Parent=Msa0108410-mRNA-1
chr1_3 exon 19916726 19916872 19916726 ID=Msa0108410-mRNA-1:exon:7218;Parent=Msa0108410-mRNA-1
chr1_3 exon 19916965 19917094 19916965 ID=Msa0108410-mRNA-1:exon:7217;Parent=Msa0108410-mRNA-1
chr1_3 exon 19917189 19917321 19917189 ID=Msa0108410-mRNA-1:exon:7216;Parent=Msa0108410-mRNA-1
chr1_3 exon 19917454 19917659 19917454 ID=Msa0108410-mRNA-1:exon:7215;Parent=Msa0108410-mRNA-1
chr1_3 exon 19918097 19918303 19918097 ID=Msa0108410-mRNA-1:exon:7214;Parent=Msa0108410-mRNA-1
chr1_3 exon 19918496 19918654 19918496 ID=Msa0108410-mRNA-1:exon:7213;Parent=Msa0108410-mRNA-1
chr1_3 exon 19919537 19919614 19919537 ID=Msa0108410-mRNA-1:exon:7212;Parent=Msa0108410-mRNA-1
chr1_3 exon 19919740 19919829 19919740 ID=Msa0108410-mRNA-1:exon:7211;Parent=Msa0108410-mRNA-1
chr1_3 exon 19919940 19920092 19919940 ID=Msa0108410-mRNA-1:exon:7210;Parent=Msa0108410-mRNA-1
chr1_3 exon 19920294 19920412 19920294 ID=Msa0108410-mRNA-1:exon:7209;Parent=Msa0108410-mRNA-1
chr1_3 exon 19921150 19921288 19921150 ID=Msa0108410-mRNA-1:exon:7208;Parent=Msa0108410-mRNA-1
chr1_3 exon 19921420 19921523 19921420 ID=Msa0108410-mRNA-1:exon:7207;Parent=Msa0108410-mRNA-1
chr1_3 exon 19923962 19924046 19923962 ID=Msa0108410-mRNA-1:exon:7206;Parent=Msa0108410-mRNA-1
chr1_3 exon 19924133 19924146 19924133 ID=Msa0108410-mRNA-1:exon:7205;Parent=Msa0108410-mRNA-1
chr1_3 exon 19924286 19924349 19924286 ID=Msa0108410-mRNA-1:exon:7204;Parent=Msa0108410-mRNA-1
chr1_3 exon 19924471 19924636 19924471 ID=Msa0108410-mRNA-1:exon:7203;Parent=Msa0108410-mRNA-1
chr1_3 exon 19925060 19925087 19925060 ID=Msa0108410-mRNA-1:exon:7202;Parent=Msa0108410-mRNA-1
chr1_3 exon 19925204 19925354 19925204 ID=Msa0108410-mRNA-1:exon:7201;Parent=Msa0108410-mRNA-1
chr1_3 exon 19925441 19925584 19925441 ID=Msa0108410-mRNA-1:exon:7200;Parent=Msa0108410-mRNA-1
chr1_3 exon 19925681 19925782 19925681 ID=Msa0108410-mRNA-1:exon:7199;Parent=Msa0108410-mRNA-1
chr1_3 exon 19927525 19927910 19927525 ID=Msa0108410-mRNA-1:exon:7198;Parent=Msa0108410-mRNA-1
chr1_3 exon 19928768 19929067 19928768 ID=Msa0108410-mRNA-1:exon:7197;Parent=Msa0108410-mRNA-1
chr1_3 five_prime_UTR 19928768 19929067 19928768 ID=Msa0108410-mRNA-1:five_prime_utr;Parent=Msa0108410-mRNA-1
chr1_3 five_prime_UTR 19927891 19927910 19927891 ID=Msa0108410-mRNA-1:five_prime_utr;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19927525 19927890 19927525 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19925681 19925782 19925681 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19925441 19925584 19925441 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19925204 19925354 19925204 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19925060 19925087 19925060 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19924471 19924636 19924471 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19924286 19924349 19924286 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19924133 19924146 19924133 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19923962 19924046 19923962 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19921420 19921523 19921420 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19921150 19921288 19921150 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19920294 19920412 19920294 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19919940 19920092 19919940 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19919740 19919829 19919740 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19919537 19919614 19919537 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19918496 19918654 19918496 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19918097 19918303 19918097 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19917454 19917659 19917454 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19917189 19917321 19917189 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19916965 19917094 19916965 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19916726 19916872 19916726 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19915834 19915901 19915834 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 CDS 19915036 19915698 19915036 ID=Msa0108410-mRNA-1:cds;Parent=Msa0108410-mRNA-1
chr1_3 three_prime_UTR 19914543 19915035 19914543 ID=Msa0108410-mRNA-1:three_prime_utr;Parent=Msa0108410-mRNA-1
Gene Sequence

>Msa0108410

ATGTCTATGGGATCAAAGATTCTTCCTTCTCTCCAGCCTATCAAATCGTTGCCTCCTGGTTTTAAGGTTAACGGTAATCTGACCCGTGATGTAATGGAAACCCATGGAGACGGTAAATTGAGAAGCAGTGTGGCTGGATCAAGTAGTCCTGAAAATGATGATCTTTCTGAAGAAGCTCAAGATCGTGCCGGTGTCATGGGTCTTTTCAATGAGGACATAGCGTATAGTGGAAAATCTGTATTATTAGAAGACAGGGAATCTATTGTTGATGAAGGCTTGGAATCTGTTCCACTCCCCTTCCAATCAGTTTCAGTGTCTTCTAGGGAATCTAGGTGGAGTGATACAACACCTTATGTTTCAAAGAAGAAACTCCAGTCTTGGTTTCAACTTCCAAATGGGAATTGGGAGTTGGCAAATATAATAAAAACTTCTGGAACAGAATCTGTTATTTCATTGCCAGATGGGAAGGTTTTAAAAGTGAAACAAGACTGTTTGGTATCGGCAAATCCTGATATTCTTGATGGAGTGGATGACCTCATGCAACTTAGTTATTTAAACGAACCGTCAGTTTTATACGATTTACAGTACAGATACAATCAAAATATGATCTATACAAAAGCGGGGCCTGTTTTGGTTGCTGTAAATCCTTTCAAGAAAGTTCCTCTGTATGGTAACAATTATATTGAAGCCTACAAGCGTAAAGCAACTGAAAGCCCTCATGTATATGCAATTACAGACACAGCCATCCGAGAAATGATACGAGATGAAGTTAATCAGTCTATAATTATAAGTGGTGAGAGTGGAGCTGGGAAGACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCGGCTCTTGGAGGTGGAAGTGGAATAGAGTATGAGATATTAAAGACTAATCCAATTCTTGAAGCCTTTGGTAATGCAAAAACTTTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATTCACTTCAGCGAAACTGGAAAAATTTCTGGTGCTAATATTCAAACATTTTTGCTTGAAAAGTCTAGAGTAGTTCAATGCAATGAAGGGGAAAGGTCATATCATATATTTTATCAGCTATGTGCCGGTGCACCACCATCTCTTCGAGAGAAGCTCAACCTACAAAATGCAGAAGATTATAAATATTTGAAGCAGAGCAATTGTTATTCAATTACTGGTGTTAATGATGCAGAAGAATTTCGCATGGTCATGGAAGCTCTTGATGTTGTCCACATCAGTAAAGAAGATCAAGAGACTGTATTTGCTATGTTAGCTGCAGTATTATGGTTAGGGAACATATCATTTACTGTCATTGATAATGAAAACCATGTTCAAGCTGTTGAAAATGAGGGGTTGTTACATGTCGCCGAATTGATTGGCTGTGACGTTGAAGATCTCAAGTTGACTCTATCAACTCGCAAAATGAAAGTTGGGAATGATAATATTGTCCAAAAGTTGACACAATCACAGGCAATTGATGCAAGAGATGCTTTGGCGAAGTCTATATATTCATGCCTGTTTGATTGGTTGGTTGAGCAAATAAATAAATCACTTGCTGTTGGCAAAAGACGAACCGGCAGATCAATCAGTATTCTAGATATATATGGCTTTGAATCATTCAATAGGAACAGTTTTGAGCAGTTTTGCATAAATTATGCAAATGAAAGATTGCAGCAACACTTCAATCGTCACTTATTCAAGTTAGAACAAGAGGAATATATTCAAGATGGAATTGACTGGGCTAAAGTTGAATTTGAAGACAATCAAGACTGTCTTAATCTTTTTGAGAAGAGACCACTGGGGTTATTATCCCTGCTAGATGAAGAGTCCACTTTCCCAAATGGTACAGATTTGACATTTGCCAACAAGCTTAAACAGCATTTAAATTCCAAATCATGTTTCAAAGGAGAAAGAGACCAAGCCTTTACTGTGTGTCATTATGCTGGAGAGGTCACATATGATACAACTGGGTTTCTGGAGAAGAATAGGGACCTGTTGCACTTGGATTCCATACAACTTCTATCCTCGTGCACATGTCATCTTCCTCAAATATTTGCAGCTCATATGCTTGCACAGTCTGAAAAGCCAGTAGTTGGTCCTTTACACAAGTCAGGTGGGGCAGATTCCCAAAAGCTAAGTGTTGCAACAAAATTCAAGGGTCAGTTGTTCCAACTGATGCAACGCTTAGAGAGCACAACTCCACATTTTATTCGCTGCATTAAGCCCAATAATCTCCAATCGCCTGAAACGTATGAACAAGGACTTGTACTACAACAGCTGAGGTGCTGTGGGGTGCTGGAAGTGGTTCGAATATCAAGATCCGGCTTTCCAACAAGAATGTCTCACCAAAAGTTCGCCAGAAGATACGGCTTTCTCCTTGATAATGCTGCATCACAGGATCCACTTAGTGTTTCAGTTTCAATTCTTCATCAATTTAATATTTTGCCTGAGATGTTTCAAGTTGGCTACACAAAGTTATTTTTCAGAACAGGGCAGATTGGTGTGCTTGAAGATACAAGAAATCGTACCCTTCATGGCATCTTACGTGTCCAAAGTTGCTTTAGGGGTTACCAAGCTCGTCGTTCCCTCAAGAAGCTTCAAGAAGGAATCTCTACTTTGCAGTCATTTATTCGGGGACAGAAAACGAGAAAGGCATATGCTGCTTTACTTCAGAGACATAGAGCTGCTATTATTATACAGAAGCGGACAAAAGCAATGGTAGTAAGAAACAGAACAGGGACTATCAGAGATGCTACAGTTGTCATACAATCAGTCATTCGGGGATGGTTGGTCAGAAGATGCTCAGGAGATATTGGATTTTCGAAACACGGGGACATGAAGACAACAGAGTCGGATGAGATTCTGGTCAAGTCATCTTTCCTGGCTGAATTGCAGCGCCGGGTACTTAAGGCCGAAGCTGCTCTGAGAGAGAAAGATGAGGAAAATGACATCCTTAACCAACGTATCCAACAATACGAGAACAGATGGTCTGAATACGAGTTGAAGATGAAATCCATGGAAGACGTGTGGCAGAAACAAATGAGATCACTTCAATCTAGCCTCTCCATTGCTAAGAAGAGCCTTGCTATTGATGACTCTGACAGAAATTCAGATGCATCTGTTAATAACACAAGCGATGAGCGTGATTACAGCTGGGATGTGGGAAGTAATCACAGGCGCCAAGAAAGCAACGGAACAAGATCAACAAGTGCTAGTTTGAGCGTTATAAGTCGGCTTGCTGAAGAATTTGAGCAAAGGAGTCAAGTATTTGGTGATGATGCCAAGTTCTTAGTTGAAGTGAAATCTGGTCAAGCAGAAGCAAGTTTGAATCCTGATCAAGAACTTAGAAGGCTAAAACAAATGTTTGAAGCTTGGAAAAGGGATTACGGGGCAAGGTTGCGTGAAACAAAGTTGATTATAAATAAACTTGGGACTGAAGACAGTGCACTTGAAAAAATGAAGAAAAAGTGGTGGGGAAGAAGGAATAGTACAAGGATAAATTGA
Protein sequence

>Msa0108410

MSMGSKILPSLQPIKSLPPGFKVNGNLTRDVMETHGDGKLRSSVAGSSSPENDDLSEEAQDRAGVMGLFNEDIAYSGKSVLLEDRESIVDEGLESVPLPFQSVSVSSRESRWSDTTPYVSKKKLQSWFQLPNGNWELANIIKTSGTESVISLPDGKVLKVKQDCLVSANPDILDGVDDLMQLSYLNEPSVLYDLQYRYNQNMIYTKAGPVLVAVNPFKKVPLYGNNYIEAYKRKATESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLREKLNLQNAEDYKYLKQSNCYSITGVNDAEEFRMVMEALDVVHISKEDQETVFAMLAAVLWLGNISFTVIDNENHVQAVENEGLLHVAELIGCDVEDLKLTLSTRKMKVGNDNIVQKLTQSQAIDARDALAKSIYSCLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKRPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSKSCFKGERDQAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCTCHLPQIFAAHMLAQSEKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPETYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLDNAASQDPLSVSVSILHQFNILPEMFQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGYQARRSLKKLQEGISTLQSFIRGQKTRKAYAALLQRHRAAIIIQKRTKAMVVRNRTGTIRDATVVIQSVIRGWLVRRCSGDIGFSKHGDMKTTESDEILVKSSFLAELQRRVLKAEAALREKDEENDILNQRIQQYENRWSEYELKMKSMEDVWQKQMRSLQSSLSIAKKSLAIDDSDRNSDASVNNTSDERDYSWDVGSNHRRQESNGTRSTSASLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQAEASLNPDQELRRLKQMFEAWKRDYGARLRETKLIINKLGTEDSALEKMKKKWWGRRNSTRIN*