AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1413620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1413620 MtrunA17_Chr1g0213861 97.674 1032 19 3 1 1032 1 1027 0.0 2067
Msa1413620 MtrunA17_Chr7g0221671 79.653 1037 195 7 4 1032 6 1034 0.0 1658
Msa1413620 MtrunA17_Chr7g0268271 65.079 63 22 0 651 713 3 65 2.30e-19 83.2
Msa1413620 MtrunA17_Chr7g0268281 84.783 46 7 0 608 653 1 46 5.72e-19 81.3
Msa1413620 MtrunA17_Chr7g0268261 85.185 54 8 0 900 953 1 54 2.01e-13 65.9
Msa1413620 MtrunA17_Chr4g0069091 21.880 649 394 23 1 573 1 612 4.02e-13 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1413620 AT2G31660.1 70.174 1036 290 7 5 1030 8 1034 0.0 1474
Msa1413620 AT3G59020.1 69.632 1034 293 7 4 1030 7 1026 0.0 1422
Msa1413620 AT3G59020.2 69.469 1035 294 7 4 1030 7 1027 0.0 1416

Find 285 sgRNAs with CRISPR-Local

Find 570 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCGTGGATCCTTCCTTTC+AGG 0.139990 tig0024042:-43653 Msa1413620:three_prime_UTR
ATATATAAATTACCAAATTT+TGG 0.144050 tig0024042:+47824 None:intergenic
TGTTAACATGCTACGCATTA+TGG 0.175977 tig0024042:+47544 None:intergenic
GCAGTCCTGTTGGCCATCTT+AGG 0.178159 tig0024042:-49402 Msa1413620:CDS
GCATTATGCGGGGAAGATTT+TGG 0.199329 tig0024042:-50273 Msa1413620:CDS
ACGCTCAAGTTCAGATTTAT+AGG 0.205041 tig0024042:+49456 None:intergenic
CATCAGAAATCTTCAATCTT+TGG 0.212439 tig0024042:-45907 Msa1413620:CDS
CAACAAAGGCTGCTGCATTT+TGG 0.228833 tig0024042:-47715 Msa1413620:intron
ATTTATTTCAGGCATTTATT+TGG 0.229478 tig0024042:-43868 Msa1413620:intron
ACCACAGATTCTTAAGCTTT+TGG 0.243604 tig0024042:-43979 Msa1413620:exon
AATTATGATTGGATATAGTT+TGG 0.244096 tig0024042:+43284 None:intergenic
TCTTGACTTCTTGCAGCATT+TGG 0.257051 tig0024042:+45882 None:intergenic
AGTTTATTCTGCAGATATTA+TGG 0.266161 tig0024042:-46823 Msa1413620:intron
TGTCACATAGATGGGTAAAT+TGG 0.266366 tig0024042:-43536 Msa1413620:three_prime_UTR
CTTCTCCCTTCGCTCCTTGA+TGG 0.266476 tig0024042:-48033 Msa1413620:intron
GATGGAGCTCTTCTTGCTAT+TGG 0.266710 tig0024042:-49511 Msa1413620:CDS
ATTGATACGTTCATCTAAAA+AGG 0.269886 tig0024042:+43709 None:intergenic
ACTTGGGCTATGCCAAAATT+TGG 0.272370 tig0024042:-47836 Msa1413620:intron
CCTTGGTTTAACATCCTTGC+TGG 0.273246 tig0024042:-45666 Msa1413620:CDS
ACTGTGGAGTTTAGCGCTTC+TGG 0.273824 tig0024042:-43736 Msa1413620:three_prime_UTR
CCACCAGTCCTCTGCAGTTT+AGG 0.276869 tig0024042:+46496 None:intergenic
TCTCAGATCAGAACAATTTC+CGG 0.301077 tig0024042:-48267 Msa1413620:CDS
TCGCCGATAAAGACTTTGTT+AGG 0.308150 tig0024042:-51137 Msa1413620:CDS
AGCTTATCTGTAAAATATTC+TGG 0.310967 tig0024042:-50708 Msa1413620:CDS
TGCAGATATTATGGTTCCTT+TGG 0.312879 tig0024042:-46814 Msa1413620:intron
AAAACTTCATTGCTAAGAAT+TGG 0.314964 tig0024042:-51185 Msa1413620:CDS
GATAAGAGAACTCAAGTGTT+TGG 0.315709 tig0024042:+44085 None:intergenic
TTTCAGAGGATGTTGGATTC+AGG 0.317562 tig0024042:-43761 Msa1413620:three_prime_UTR
GGCAAGAAAGTTTGCTGCCT+TGG 0.320902 tig0024042:-45683 Msa1413620:CDS
AGAAAATGACGACGATGATA+TGG 0.321952 tig0024042:-45368 Msa1413620:CDS
CTCTTCTCGTCTCAGCATGC+TGG 0.322424 tig0024042:+44040 None:intergenic
TCTTCTACCTGTCACATAGA+TGG 0.337679 tig0024042:-43545 Msa1413620:three_prime_UTR
CAGCGGTCAAAGTTGGTCTA+TGG 0.337689 tig0024042:-43843 Msa1413620:three_prime_UTR
GTTCTTTGCATGTAATGAAA+TGG 0.338050 tig0024042:+46766 None:intergenic
CCATCAGCAATGCGTTTAAC+AGG 0.338300 tig0024042:-43397 Msa1413620:three_prime_UTR
ATTCCTAACAAAGTCTTTAT+CGG 0.340148 tig0024042:+51134 None:intergenic
GTTTCACGGTTTCCAGCATA+TGG 0.341591 tig0024042:-43618 Msa1413620:three_prime_UTR
AAAGGATCCACTTCATCAAT+TGG 0.341738 tig0024042:+44286 None:intergenic
CAGTAGAATACAGGTCTTAT+AGG 0.342847 tig0024042:-49540 Msa1413620:CDS
GCCTTTCTTTCATTCGGATT+CGG 0.343757 tig0024042:+51336 None:intergenic
AAACAGGCAGCGTGGGTTGC+AGG 0.351039 tig0024042:-48310 Msa1413620:intron
ATGGAGCTCTTCTTGCTATT+GGG 0.353649 tig0024042:-49510 Msa1413620:CDS
AAGAATGCGGAGAACGAATA+AGG 0.358824 tig0024042:+50873 None:intergenic
ACTGTCCCCATCTTCTTGAT+TGG 0.360820 tig0024042:-50936 Msa1413620:CDS
ATGATAATGATCAAAAGCTT+TGG 0.361240 tig0024042:-49901 Msa1413620:CDS
GTCACATAGATGGGTAAATT+GGG 0.364341 tig0024042:-43535 Msa1413620:three_prime_UTR
CGCTCAAGTTCAGATTTATA+GGG 0.366117 tig0024042:+49457 None:intergenic
AAGACAATTTCAATCAGCTT+TGG 0.366324 tig0024042:+46519 None:intergenic
CACTGGACATGTGGAACCTT+TGG 0.368126 tig0024042:-47249 Msa1413620:CDS
TCCAATAGGAAACGTCATTC+AGG 0.373563 tig0024042:-44363 Msa1413620:intron
ATTATGATTGGATATAGTTT+GGG 0.376977 tig0024042:+43285 None:intergenic
CAACACGTCTTTCCCGAGTT+TGG 0.382141 tig0024042:-49424 Msa1413620:CDS
ATCAAAATGTATTCAGTGCT+TGG 0.383720 tig0024042:-50572 Msa1413620:CDS
CAGTGGTTCTGACAGGGAAA+TGG 0.388816 tig0024042:-45311 Msa1413620:CDS
CAGTCCTGTTGGCCATCTTA+GGG 0.388883 tig0024042:-49401 Msa1413620:CDS
GAATGGATGGATCAGGAATC+TGG 0.390772 tig0024042:+50749 None:intergenic
GGGACAGTGGTCGGGATAAT+CGG 0.391844 tig0024042:+50951 None:intergenic
ATTGAACGTTTGCATAGAAC+TGG 0.394636 tig0024042:-46441 Msa1413620:CDS
CCCCATGATTTGCGAAGATC+AGG 0.398780 tig0024042:+50489 None:intergenic
AATTCAAATCAGACGAAGAT+AGG 0.399839 tig0024042:-50837 Msa1413620:CDS
TGATAATGATCAAAAGCTTT+GGG 0.400167 tig0024042:-49900 Msa1413620:CDS
ATAAGAGAACTCAAGTGTTT+GGG 0.402571 tig0024042:+44086 None:intergenic
GTTAACATGCTACGCATTAT+GGG 0.406544 tig0024042:+47545 None:intergenic
AAGGATCCACTTCATCAATT+GGG 0.407208 tig0024042:+44287 None:intergenic
ATAGTTTGGGTTTACTATGT+TGG 0.408157 tig0024042:+43298 None:intergenic
TAAAAGAGTTGGAAGATGAT+TGG 0.409023 tig0024042:+51278 None:intergenic
GAAGCCATTGCTGCACTAAT+CGG 0.409071 tig0024042:+43587 None:intergenic
CTGACTATCAACAGTGTTTG+TGG 0.410520 tig0024042:-46743 Msa1413620:CDS
CCGTGCCACTCTTGATCTCC+TGG 0.410642 tig0024042:-45597 Msa1413620:CDS
AAGATCCACATGAGTATGTT+AGG 0.411092 tig0024042:-49874 Msa1413620:CDS
TCAGCAGCCTTTCTTTCATT+CGG 0.412223 tig0024042:+51330 None:intergenic
CGTCTGTCAGTAAACTAACT+AGG 0.414101 tig0024042:-51416 Msa1413620:five_prime_UTR
TTGCGAAGATCAGGATCAAC+AGG 0.414630 tig0024042:+50498 None:intergenic
CTTAGCATATTGCAAAAGTT+AGG 0.417195 tig0024042:-45935 Msa1413620:CDS
ATCCTGATCTTCGCAAATCA+TGG 0.418182 tig0024042:-50491 Msa1413620:CDS
GAGACTATTGTGGACAAGTT+TGG 0.418235 tig0024042:-47880 Msa1413620:CDS
CACAAACACTGTTGATAGTC+AGG 0.421066 tig0024042:+46744 None:intergenic
ATTAATCAATAGAAAAGTTA+TGG 0.423401 tig0024042:+43335 None:intergenic
CAAAGAAGAGGAAGTGGAGT+GGG 0.425945 tig0024042:-51517 Msa1413620:five_prime_UTR
TGAAGACCTTGTGTTTACTT+TGG 0.426103 tig0024042:-47902 Msa1413620:CDS
CTTTGGACAATTATATTTCA+AGG 0.426833 tig0024042:-46797 Msa1413620:CDS
CCAACATCCTCTGAAATCAA+TGG 0.426870 tig0024042:+43768 None:intergenic
TGGTTAGATATTGAAGAAGT+AGG 0.428313 tig0024042:+50186 None:intergenic
GTGAAGCAAAGAAGAGGAAG+TGG 0.430431 tig0024042:-51523 Msa1413620:five_prime_UTR
TGATCTCCTGGTTGCATACA+AGG 0.431116 tig0024042:-45585 Msa1413620:CDS
GCAGAGGACTGGTGGACCAC+TGG 0.433625 tig0024042:-46488 Msa1413620:CDS
GGGCTGCCAATGGTTGGTAT+AGG 0.437415 tig0024042:-43514 Msa1413620:three_prime_UTR
AACGCATTGCTGATGGGCAC+TGG 0.438256 tig0024042:+43404 None:intergenic
TGGCATAGCCCAAGTGCATA+AGG 0.439443 tig0024042:+47844 None:intergenic
GAAGATGATTGGGTGCATAT+TGG 0.439602 tig0024042:+51289 None:intergenic
AGAACTCAAGTGTTTGGGTC+AGG 0.439926 tig0024042:+44091 None:intergenic
TTCTTTGCATGTAATGAAAT+GGG 0.441132 tig0024042:+46767 None:intergenic
CAACACATTGCAATGCCTTC+CGG 0.443732 tig0024042:+48248 None:intergenic
GCATACAAGGATCAAGTTGC+AGG 0.446246 tig0024042:-45572 Msa1413620:intron
TCAATGCGGACAGGTAGTTC+AGG 0.449994 tig0024042:+48208 None:intergenic
GTTTGATCCAATCAAGAAGA+TGG 0.450885 tig0024042:+50929 None:intergenic
GTTCTTCAAACTTATGAATG+AGG 0.452917 tig0024042:-47932 Msa1413620:CDS
TTCTTCAATATCTAACCAAC+AGG 0.453303 tig0024042:-50181 Msa1413620:intron
CCCGAGTTTGGCAGTCCTGT+TGG 0.454925 tig0024042:-49412 Msa1413620:CDS
GGTTTCCATGCCAAGTTTCA+CGG 0.456471 tig0024042:-43632 Msa1413620:three_prime_UTR
GGTTTAGTTTAGAAGAGAGA+TGG 0.457673 tig0024042:-51394 Msa1413620:exon
CAATTGCCAGGAGAGGCTTT+AGG 0.466553 tig0024042:-45629 Msa1413620:CDS
GAACCTTTGGCCATTGATGA+TGG 0.467627 tig0024042:-47236 Msa1413620:CDS
TCTTATCAAGCTCTTGCAAA+TGG 0.467812 tig0024042:-44069 Msa1413620:CDS
AGTGGTTCTGACAGGGAAAT+GGG 0.468849 tig0024042:-45310 Msa1413620:CDS
ATTGGAGAGGCCTGTTCCCT+TGG 0.469011 tig0024042:-50529 Msa1413620:CDS
ATGGGAACTGATGCTGAAGA+TGG 0.471480 tig0024042:-45292 Msa1413620:CDS
TCCTGATCTTCGCAAATCAT+GGG 0.471937 tig0024042:-50490 Msa1413620:CDS
AAAGTTATGGAGTGACTGGC+TGG 0.472326 tig0024042:+43348 None:intergenic
TGTCTCGTGAATAATGTGAT+AGG 0.472814 tig0024042:+50807 None:intergenic
CACATGTCCAGTGATATTGT+TGG 0.473110 tig0024042:+47259 None:intergenic
TCTCCTGGCAATTGATCAGC+TGG 0.473397 tig0024042:+45638 None:intergenic
TTGAAGACTTGTATAGTCCT+AGG 0.475338 tig0024042:-49747 Msa1413620:CDS
CTTCCAGCTGATCAATTGCC+AGG 0.475735 tig0024042:-45641 Msa1413620:CDS
GGTTGACCTTCCAAGGGAAC+AGG 0.477178 tig0024042:+50519 None:intergenic
CAACATCCTCTGAAATCAAT+GGG 0.480986 tig0024042:+43769 None:intergenic
AGCTAGCTGAGCTGAGGAAG+AGG 0.482729 tig0024042:-51474 Msa1413620:five_prime_UTR
TCATCTGAGTCCTCATCATC+GGG 0.483411 tig0024042:+44340 None:intergenic
ACGATGATTTGTAAAAGAGT+TGG 0.483438 tig0024042:+51267 None:intergenic
ATCAACAGGTTGACCTTCCA+AGG 0.484157 tig0024042:+50512 None:intergenic
AGGATGACAGTGGTTCTGAC+AGG 0.484366 tig0024042:-45318 Msa1413620:CDS
GTTAAATATATTGAGAAGGT+GGG 0.484925 tig0024042:+50780 None:intergenic
AAATCCACGGAGGCAGTCCT+AGG 0.485246 tig0024042:+49730 None:intergenic
GTCATCTGAGTCCTCATCAT+CGG 0.486522 tig0024042:+44339 None:intergenic
CCATTGATTTCAGAGGATGT+TGG 0.487777 tig0024042:-43768 Msa1413620:three_prime_UTR
ATGTTTCACAAGCATTATGC+GGG 0.488084 tig0024042:-50284 Msa1413620:CDS
CTATAAGACCTGTATTCTAC+TGG 0.488098 tig0024042:+49541 None:intergenic
ATGCTGGAAACCGTGAAACT+TGG 0.488760 tig0024042:+43622 None:intergenic
ACTTAGAAAATTGACTGATC+AGG 0.489306 tig0024042:-45248 Msa1413620:intron
TTGGCCCTAAGATGGCCAAC+AGG 0.489970 tig0024042:+49397 None:intergenic
TGACATTCAACAGATTTAAG+TGG 0.490324 tig0024042:+50246 None:intergenic
GCTACTTGAATGGATGGATC+AGG 0.491104 tig0024042:+50742 None:intergenic
AGAAGATGGGGACAGTGGTC+GGG 0.491280 tig0024042:+50943 None:intergenic
CCTGTTAAACGCATTGCTGA+TGG 0.492883 tig0024042:+43397 None:intergenic
GCTAGCTGAGCTGAGGAAGA+GGG 0.493839 tig0024042:-51473 Msa1413620:five_prime_UTR
TTTCTCTCCAACAATATCAC+TGG 0.494642 tig0024042:-47266 Msa1413620:CDS
GAAGTAGTTGTTATACTTGA+AGG 0.494802 tig0024042:-51369 Msa1413620:CDS
TAGAAAAGTTATGGAGTGAC+TGG 0.496000 tig0024042:+43344 None:intergenic
CAAGAGTGGCACGGAATACC+CGG 0.497487 tig0024042:+45606 None:intergenic
TGAGATTGAGAAGGAAAAGT+CGG 0.497844 tig0024042:-44016 Msa1413620:CDS
ATGAAGCACCAGTAGAATAC+AGG 0.501247 tig0024042:-49549 Msa1413620:CDS
TGATGGAAGCACTATCAGAT+TGG 0.503592 tig0024042:-47219 Msa1413620:CDS
GATGGAAGCACTATCAGATT+GGG 0.504868 tig0024042:-47218 Msa1413620:CDS
GCCAACAGGACTGCCAAACT+CGG 0.505683 tig0024042:+49411 None:intergenic
GCAAAGAAGAGGAAGTGGAG+TGG 0.506059 tig0024042:-51518 Msa1413620:five_prime_UTR
GGACAAGTTTGGTGAAGAAA+TGG 0.506738 tig0024042:-47869 Msa1413620:CDS
ACCCGGCCTAAAGCCTCTCC+TGG 0.506757 tig0024042:+45623 None:intergenic
AAAAGAGTTGGAAGATGATT+GGG 0.509158 tig0024042:+51279 None:intergenic
TTCGCAAATCATGGGGTTGG+TGG 0.509717 tig0024042:-50482 Msa1413620:CDS
GAAATGGCACCTTATGCACT+TGG 0.509924 tig0024042:-47853 Msa1413620:CDS
AGTAGGTTGATAACTCTGTC+AGG 0.510634 tig0024042:+50203 None:intergenic
ACAGTCCCCAATTGATGAAG+TGG 0.510949 tig0024042:-44293 Msa1413620:CDS
GCCAGGAGAGGCTTTAGGCC+GGG 0.512244 tig0024042:-45624 Msa1413620:CDS
TTTGGACAATTATATTTCAA+GGG 0.512445 tig0024042:-46796 Msa1413620:CDS
AAAGGCTGCTGAACAAAGGT+TGG 0.513295 tig0024042:-51319 Msa1413620:CDS
CGCTGATGATTCAAGTTCAA+TGG 0.515595 tig0024042:-47660 Msa1413620:CDS
CTTTGCAGAAGCTGCAGAAG+AGG 0.515709 tig0024042:-45404 Msa1413620:intron
AAGAAGATGGGGACAGTGGT+CGG 0.516125 tig0024042:+50942 None:intergenic
TGTTAAATATATTGAGAAGG+TGG 0.516144 tig0024042:+50779 None:intergenic
TCGGACAGGATTCCATATGC+TGG 0.517517 tig0024042:+43606 None:intergenic
TGCCAGGAGAGGCTTTAGGC+CGG 0.518509 tig0024042:-45625 Msa1413620:CDS
TCTTCTCGTCTCAGCATGCT+GGG 0.520955 tig0024042:+44041 None:intergenic
AGATCAGCTACTTGAATGGA+TGG 0.521067 tig0024042:+50736 None:intergenic
TTTATTGAAGCTTGCAAAGG+TGG 0.522081 tig0024042:-48163 Msa1413620:intron
CTGTTAAACGCATTGCTGAT+GGG 0.523820 tig0024042:+43398 None:intergenic
GTGAGTTGGTTCGAAAGCGC+AGG 0.523922 tig0024042:-49702 Msa1413620:CDS
CTTCTACCTGTCACATAGAT+GGG 0.524100 tig0024042:-43544 Msa1413620:three_prime_UTR
TGTATACTGTGCTGCAGCCT+CGG 0.524758 tig0024042:-49970 Msa1413620:CDS
TCAATTGTAATTCTGAGATA+CGG 0.526551 tig0024042:+46459 None:intergenic
CTTCCTAAACTGCAGAGGAC+TGG 0.526734 tig0024042:-46499 Msa1413620:CDS
TTTGGCTCAGCGGTCAAAGT+TGG 0.527318 tig0024042:-43850 Msa1413620:three_prime_UTR
TTTGATCCAATCAAGAAGAT+GGG 0.528330 tig0024042:+50930 None:intergenic
CGCATTATGGGAAGCAAGGT+AGG 0.531290 tig0024042:+47557 None:intergenic
GTCATTCAGGCCCGATGATG+AGG 0.532142 tig0024042:-44350 Msa1413620:CDS
GAGAGGCCTGTTCCCTTGGA+AGG 0.534183 tig0024042:-50525 Msa1413620:CDS
AATTTACCCATCTATGTGAC+AGG 0.535722 tig0024042:+43538 None:intergenic
TCCGAATCCGAATGAAAGAA+AGG 0.536209 tig0024042:-51337 Msa1413620:CDS
ACCGTACCTTGGCCCTAAGA+TGG 0.536280 tig0024042:+49389 None:intergenic
CTGTTGAATGTCATTCGAGC+AGG 0.539977 tig0024042:-50236 Msa1413620:CDS
GAAATGTCTTCTCATTCAAG+TGG 0.539995 tig0024042:-46406 Msa1413620:intron
TGTTGGCCATCTTAGGGCCA+AGG 0.540483 tig0024042:-49395 Msa1413620:intron
AGCGGTCAAAGTTGGTCTAT+GGG 0.542588 tig0024042:-43842 Msa1413620:three_prime_UTR
AAATTGGGGCTGCCAATGGT+TGG 0.543562 tig0024042:-43520 Msa1413620:three_prime_UTR
AGCTGATCAATTGCCAGGAG+AGG 0.544550 tig0024042:-45636 Msa1413620:CDS
ATCTTCGCAAATCATGGGGT+TGG 0.544792 tig0024042:-50485 Msa1413620:CDS
GATAGTGCTTCCATCATCAA+TGG 0.545002 tig0024042:+47226 None:intergenic
CAGAGGACTGGTGGACCACT+GGG 0.550023 tig0024042:-46487 Msa1413620:CDS
GGGTAAATTGGGGCTGCCAA+TGG 0.550812 tig0024042:-43524 Msa1413620:three_prime_UTR
TGGGAACTGATGCTGAAGAT+GGG 0.553757 tig0024042:-45291 Msa1413620:CDS
CAACAATATCACTGGACATG+TGG 0.554151 tig0024042:-47258 Msa1413620:CDS
TCGTGAATAATGTGATAGGC+AGG 0.555259 tig0024042:+50811 None:intergenic
AGGTCTTATAGGCAGAAAGA+TGG 0.556191 tig0024042:-49529 Msa1413620:CDS
CTCAAAAGAGAAGGAAGTTG+AGG 0.557170 tig0024042:+51093 None:intergenic
GTTTACTTTGGAGACTATTG+TGG 0.557940 tig0024042:-47890 Msa1413620:CDS
CATTGCTGCACTAATCGGAC+AGG 0.558667 tig0024042:+43592 None:intergenic
GATGAGATCAGCTACTTGAA+TGG 0.559770 tig0024042:+50732 None:intergenic
TGCAGAAGCTGCAGAAGAGG+AGG 0.562224 tig0024042:-45401 Msa1413620:intron
AAAGAAGAGGAAGTGGAGTG+GGG 0.564424 tig0024042:-51516 Msa1413620:five_prime_UTR
CACGTACCATCAAGGAGCGA+AGG 0.566318 tig0024042:+48027 None:intergenic
GCTGCGAAACCCTGAAAACA+AGG 0.567003 tig0024042:-50318 Msa1413620:CDS
GGTTATACGTACATATATAG+AGG 0.568759 tig0024042:+50684 None:intergenic
CACTGGATTTATACTCTCAA+CGG 0.569482 tig0024042:+43421 None:intergenic
GAGTATGTTAGGAAAGGCTA+TGG 0.572371 tig0024042:-49863 Msa1413620:intron
ATCAGCTGGAAGTGCCAGCA+AGG 0.574149 tig0024042:+45652 None:intergenic
GGCATGGAAACCTGAAAGGA+AGG 0.575536 tig0024042:+43643 None:intergenic
CAGCATGCTGAGACGAGAAG+AGG 0.576433 tig0024042:-44039 Msa1413620:CDS
GAATGGCGGCAACTTGTCTG+AGG 0.576913 tig0024042:+51214 None:intergenic
GTCTGTCAGTAAACTAACTA+GGG 0.577916 tig0024042:-51415 Msa1413620:five_prime_UTR
TTAAATATATTGAGAAGGTG+GGG 0.581029 tig0024042:+50781 None:intergenic
CCTAAACTGCAGAGGACTGG+TGG 0.581251 tig0024042:-46496 Msa1413620:CDS
GAGAAGAGGTGAGATTGAGA+AGG 0.581346 tig0024042:-44025 Msa1413620:CDS
TTGAATGTCATTCGAGCAGG+TGG 0.583758 tig0024042:-50233 Msa1413620:CDS
TAAGGGAATACCTTGACCAT+CGG 0.584319 tig0024042:+47520 None:intergenic
ACTTGGCATGGAAACCTGAA+AGG 0.585820 tig0024042:+43639 None:intergenic
ATAGCATACCTCAAAAGAGA+AGG 0.586840 tig0024042:+51084 None:intergenic
TTGGACAATTATATTTCAAG+GGG 0.589802 tig0024042:-46795 Msa1413620:CDS
CCACATGAGTATGTTAGGAA+AGG 0.589934 tig0024042:-49869 Msa1413620:CDS
CTAGTTAGTTTACTGACAGA+CGG 0.590620 tig0024042:+51417 None:intergenic
CTGTCCGATTAGTGCAGCAA+TGG 0.593204 tig0024042:-43591 Msa1413620:three_prime_UTR
AAAACAGAATCAATGCGGAC+AGG 0.593718 tig0024042:+48199 None:intergenic
TATCATTGAAGCACATGAGA+GGG 0.594402 tig0024042:+49918 None:intergenic
AATGTTTCACAAGCATTATG+CGG 0.595466 tig0024042:-50285 Msa1413620:CDS
TCCAAAAGCTTAAGAATCTG+TGG 0.596418 tig0024042:+43978 None:intergenic
AAAGAAAGGCTGCTGAACAA+AGG 0.597576 tig0024042:-51323 Msa1413620:CDS
TCAAGTTCAATGGCTGCAGT+TGG 0.600507 tig0024042:-47650 Msa1413620:CDS
CCAACAGGACTGCCAAACTC+GGG 0.601191 tig0024042:+49412 None:intergenic
AGGATCCACTTCATCAATTG+GGG 0.601464 tig0024042:+44288 None:intergenic
CATATTTAATAGAAAGAATG+CGG 0.602450 tig0024042:+50860 None:intergenic
ATGTTAACAACCGATGGTCA+AGG 0.603700 tig0024042:-47530 Msa1413620:intron
CTTGATCCTTGTATGCAACC+AGG 0.604622 tig0024042:+45579 None:intergenic
GAGGTTCCCATTGATTTCAG+AGG 0.604872 tig0024042:-43775 Msa1413620:three_prime_UTR
AAATTGCCTATACCAACCAT+TGG 0.605583 tig0024042:+43508 None:intergenic
CTAGCTGAGCTGAGGAAGAG+GGG 0.606609 tig0024042:-51472 Msa1413620:five_prime_UTR
GTGTGTTAAATATATTGAGA+AGG 0.607757 tig0024042:+50776 None:intergenic
TCTGATCTGAGAAGCTAATG+TGG 0.613687 tig0024042:+48278 None:intergenic
GGATGACAGTGGTTCTGACA+GGG 0.618263 tig0024042:-45317 Msa1413620:CDS
GCGAGTGTGAAGCAAAGAAG+AGG 0.618413 tig0024042:-51529 Msa1413620:five_prime_UTR
TTCTAAACAGACTCTACACT+CGG 0.620641 tig0024042:-50434 Msa1413620:intron
GCTACGCATTATGGGAAGCA+AGG 0.622515 tig0024042:+47553 None:intergenic
TGAGTTGGTTCGAAAGCGCA+GGG 0.626418 tig0024042:-49701 Msa1413620:CDS
TAGTCCTAGGACTGCCTCCG+TGG 0.626651 tig0024042:-49734 Msa1413620:CDS
CAGGCATTTATTTGGCTCAG+CGG 0.627478 tig0024042:-43860 Msa1413620:three_prime_UTR
AAATGGCACCTTATGCACTT+GGG 0.628408 tig0024042:-47852 Msa1413620:CDS
CGTAGCATGTTAACAACCGA+TGG 0.630518 tig0024042:-47536 Msa1413620:CDS
CTTGAAATATAATTGTCCAA+AGG 0.630964 tig0024042:+46798 None:intergenic
AATGGCGGCAACTTGTCTGA+GGG 0.630984 tig0024042:+51215 None:intergenic
CCTGCGAGTTTAGTATGCTG+AGG 0.633004 tig0024042:-43794 Msa1413620:three_prime_UTR
CAACTCACTCATAAAATCCA+CGG 0.633012 tig0024042:+49717 None:intergenic
AAAAGAAGAACGTCAAGCCG+AGG 0.634422 tig0024042:+49953 None:intergenic
CTGCAAGAAGTCAAGAAGAG+TGG 0.634459 tig0024042:-45875 Msa1413620:CDS
TTATCATTGAAGCACATGAG+AGG 0.634688 tig0024042:+49917 None:intergenic
ATTGTCTTCCTAAACTGCAG+AGG 0.634847 tig0024042:-46504 Msa1413620:CDS
GGAAACCGTGAAACTTGGCA+TGG 0.636126 tig0024042:+43627 None:intergenic
TCACATAGATGGGTAAATTG+GGG 0.636621 tig0024042:-43534 Msa1413620:three_prime_UTR
CTTCCATCATCAATGGCCAA+AGG 0.636876 tig0024042:+47233 None:intergenic
GAAAGAGATTGAGTGAGCAG+TGG 0.640985 tig0024042:+51158 None:intergenic
TTGTACAGCTAGCTGAGCTG+AGG 0.641168 tig0024042:-51480 Msa1413620:five_prime_UTR
AAATGTATTCAGTGCTTGGA+TGG 0.641307 tig0024042:-50568 Msa1413620:CDS
ACGTACCATCAAGGAGCGAA+GGG 0.642973 tig0024042:+48028 None:intergenic
AGTTTACTGACAGACGGAGA+GGG 0.645436 tig0024042:+51423 None:intergenic
CCTGATCTTCGCAAATCATG+GGG 0.645502 tig0024042:-50489 Msa1413620:CDS
CCTCAGCATACTAAACTCGC+AGG 0.646135 tig0024042:+43794 None:intergenic
CCTTTCCTAACATACTCATG+TGG 0.647215 tig0024042:+49869 None:intergenic
TCAAACTGATGATGAAGATG+AGG 0.647870 tig0024042:-45338 Msa1413620:CDS
CTGATCTGAGAAGCTAATGT+GGG 0.648144 tig0024042:+48279 None:intergenic
TTGATCCAATCAAGAAGATG+GGG 0.650413 tig0024042:+50931 None:intergenic
CCAGGAGATCAAGAGTGGCA+CGG 0.650577 tig0024042:+45597 None:intergenic
TGCAACCAGGAGATCAAGAG+TGG 0.652472 tig0024042:+45592 None:intergenic
TGCAATCATCAGATCCAATG+AGG 0.656544 tig0024042:-44122 Msa1413620:CDS
AATCAAGAAGATGGGGACAG+TGG 0.659255 tig0024042:+50938 None:intergenic
GCATTGCAATGTGTTGTCTG+TGG 0.661281 tig0024042:-48241 Msa1413620:CDS
TAGTTTACTGACAGACGGAG+AGG 0.668057 tig0024042:+51422 None:intergenic
AGATCAGAACAATTTCCGGA+AGG 0.668438 tig0024042:-48263 Msa1413620:CDS
GGGAACTGATGCTGAAGATG+GGG 0.669290 tig0024042:-45290 Msa1413620:CDS
ATGTTGGATTCAGGAAACTG+TGG 0.669716 tig0024042:-43752 Msa1413620:three_prime_UTR
TAGTCTCCAAAGTAAACACA+AGG 0.681795 tig0024042:+47896 None:intergenic
TCAACAGGTTGACCTTCCAA+GGG 0.688690 tig0024042:+50513 None:intergenic
AATGACGACGATGATATGGA+CGG 0.695430 tig0024042:-45364 Msa1413620:CDS
CAATATGCTAAGAGTCAATG+TGG 0.695584 tig0024042:+45946 None:intergenic
TGTTTCACAAGCATTATGCG+GGG 0.696183 tig0024042:-50283 Msa1413620:CDS
GAAAAGGAGTAGAACAACGA+CGG 0.699603 tig0024042:+43681 None:intergenic
TGAGATACGGCTCAACCCAG+TGG 0.705549 tig0024042:+46472 None:intergenic
CCAGCAAGGATGTTAAACCA+AGG 0.712970 tig0024042:+45666 None:intergenic
GATGAAGATGAGGATGACAG+TGG 0.770603 tig0024042:-45328 Msa1413620:CDS
CTCACTCATAAAATCCACGG+AGG 0.783942 tig0024042:+49720 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAAAATACATAAATAGA+AGG + tig0024042:45534-45553 None:intergenic 10.0%
!!! TCTATTTATGTATTTTAAAT+TGG - tig0024042:45534-45553 Msa1413620:intron 10.0%
!! AAAAAATAATTATATACTCA+TGG + tig0024042:46054-46073 None:intergenic 10.0%
!!! ATATATAAATTACCAAATTT+TGG + tig0024042:47012-47031 None:intergenic 10.0%
!!! TTGAATTTTTATCATTAATT+TGG - tig0024042:48139-48158 Msa1413620:intron 10.0%
!! AAAAATAAATAAAAGAGTTA+CGG + tig0024042:49306-49325 None:intergenic 10.0%
!!! TAAAATATTTTAATCTGTAT+AGG - tig0024042:49802-49821 Msa1413620:intron 10.0%
!! TATTATTAAAACCAAAAAAA+TGG + tig0024042:51390-51409 None:intergenic 10.0%
!! TTTGAATGAATAAAATGAAA+TGG + tig0024042:44439-44458 None:intergenic 15.0%
!! GTTAAGAATAATAAGATTTA+TGG - tig0024042:45222-45241 Msa1413620:intron 15.0%
!!! TGCCTTATTTAATTTTTTTT+GGG + tig0024042:45650-45669 None:intergenic 15.0%
!!! ATGTTTGTTACTTAATAAAA+GGG - tig0024042:47854-47873 Msa1413620:CDS 15.0%
!! CAAATTTCTTAAAGATAATA+GGG - tig0024042:48794-48813 Msa1413620:intron 15.0%
!! TCCATATATTAACTAAATAT+AGG - tig0024042:49647-49666 Msa1413620:intron 15.0%
!! TCCTATATTTAGTTAATATA+TGG + tig0024042:49651-49670 None:intergenic 15.0%
!! AAATCATTAAGTTAACAAAA+TGG + tig0024042:50156-50175 None:intergenic 15.0%
!! TCTATAATTCAAATAAACTA+TGG + tig0024042:50190-50209 None:intergenic 15.0%
!!! TTGTATTTTAACCATTTTTT+TGG - tig0024042:51376-51395 Msa1413620:CDS 15.0%
!! ATTAATCAATAGAAAAGTTA+TGG + tig0024042:51501-51520 None:intergenic 15.0%
!!! AATGAAGTTTTTGAAATGAA+TGG + tig0024042:43639-43658 None:intergenic 20.0%
!! CATATTTAATAGAAAGAATG+CGG + tig0024042:43976-43995 None:intergenic 20.0%
!! ATGATGAAAATAATAAGAGA+AGG + tig0024042:44177-44196 None:intergenic 20.0%
!! TAAAAAAATGAAGATGAAGA+CGG + tig0024042:44205-44224 None:intergenic 20.0%
!!! TTTTTTTAAATTTACGCAGT+TGG - tig0024042:44217-44236 Msa1413620:intron 20.0%
!!! TCATTGTTGAAATTTTGAAA+AGG - tig0024042:45182-45201 Msa1413620:intron 20.0%
!! GAATAATAAGATTTATGGAT+TGG - tig0024042:45227-45246 Msa1413620:intron 20.0%
!!! ATTTATGTTTTTTCCATTCT+AGG - tig0024042:45257-45276 Msa1413620:CDS 20.0%
!!! AAAGGGATGTTTTAAATTTT+AGG - tig0024042:45623-45642 Msa1413620:CDS 20.0%
!!! GCCTTATTTAATTTTTTTTG+GGG + tig0024042:45649-45668 None:intergenic 20.0%
!!! GTGCCTTATTTAATTTTTTT+TGG + tig0024042:45651-45670 None:intergenic 20.0%
!!! AATTAAATAAGGCACTATAA+AGG - tig0024042:45656-45675 Msa1413620:CDS 20.0%
!!! ATTTTATGAAAAAAACACAC+TGG - tig0024042:45680-45699 Msa1413620:CDS 20.0%
!! AAATAATTATATACTCATGG+AGG + tig0024042:46051-46070 None:intergenic 20.0%
!!! TAATTATTTTTTTCATCGCA+CGG - tig0024042:46062-46081 Msa1413620:intron 20.0%
!! AATTCAAGAATTGAACAAAA+AGG - tig0024042:46148-46167 Msa1413620:intron 20.0%
!! ATTCAAGAATTGAACAAAAA+GGG - tig0024042:46149-46168 Msa1413620:intron 20.0%
!! TTATAGTGAAAGCAATATTA+AGG + tig0024042:46369-46388 None:intergenic 20.0%
!! AGTATTTGAGTAATACATTA+TGG - tig0024042:46451-46470 Msa1413620:CDS 20.0%
!! CAAAATTCTTTAGATAATGA+AGG + tig0024042:46479-46498 None:intergenic 20.0%
!!! CTTCATTATCTAAAGAATTT+TGG - tig0024042:46477-46496 Msa1413620:CDS 20.0%
!!! TATTGATTTCTTTTCAAGTA+TGG - tig0024042:47639-47658 Msa1413620:CDS 20.0%
!!! CTTTTATTAAGTAACAAACA+TGG + tig0024042:47855-47874 None:intergenic 20.0%
!!! CATGTTTGTTACTTAATAAA+AGG - tig0024042:47853-47872 Msa1413620:CDS 20.0%
!!! ATATCTTTCAAATATTTTCC+TGG - tig0024042:47920-47939 Msa1413620:CDS 20.0%
!! TTTGGACAATTATATTTCAA+GGG - tig0024042:48037-48056 Msa1413620:CDS 20.0%
!! AATGTTCAAAATAGAAACAT+GGG + tig0024042:48567-48586 None:intergenic 20.0%
!!! CCTATTATCTTTAAGAAATT+TGG + tig0024042:48796-48815 None:intergenic 20.0%
!! CCAAATTTCTTAAAGATAAT+AGG - tig0024042:48793-48812 Msa1413620:intron 20.0%
!! TAAATTACAATATGATTGTC+AGG - tig0024042:49368-49387 Msa1413620:intron 20.0%
!!! ATGTTTTATTGTTTACTACT+AGG - tig0024042:49904-49923 Msa1413620:CDS 20.0%
!! ACTTTATACTATGTCAAATT+TGG + tig0024042:49938-49957 None:intergenic 20.0%
!!! GATTCATATTTGTATCTTTT+AGG - tig0024042:50315-50334 Msa1413620:CDS 20.0%
!! GTATCCACAAAAAAAATAAA+AGG + tig0024042:50568-50587 None:intergenic 20.0%
!! ACAATTATAGCAATAATGAT+AGG + tig0024042:50649-50668 None:intergenic 20.0%
!! ATTTATTTCAGGCATTTATT+TGG - tig0024042:50965-50984 Msa1413620:CDS 20.0%
! AAAACTTCATTGCTAAGAAT+TGG - tig0024042:43648-43667 Msa1413620:three_prime_UTR 25.0%
! ATTCCTAACAAAGTCTTTAT+CGG + tig0024042:43702-43721 None:intergenic 25.0%
! TTAAATATATTGAGAAGGTG+GGG + tig0024042:44055-44074 None:intergenic 25.0%
! GTTAAATATATTGAGAAGGT+GGG + tig0024042:44056-44075 None:intergenic 25.0%
! TGTTAAATATATTGAGAAGG+TGG + tig0024042:44057-44076 None:intergenic 25.0%
! GTGTGTTAAATATATTGAGA+AGG + tig0024042:44060-44079 None:intergenic 25.0%
! AGCTTATCTGTAAAATATTC+TGG - tig0024042:44125-44144 Msa1413620:CDS 25.0%
! TGAAAATAATAAGAGAAGGT+AGG + tig0024042:44173-44192 None:intergenic 25.0%
!! TTTTGATCAAACAAAAGCTT+TGG + tig0024042:44248-44267 None:intergenic 25.0%
!!! TGTTTTTAAATGTATTGGAG+AGG - tig0024042:44291-44310 Msa1413620:CDS 25.0%
! TATCATATAAACCTCTTTAG+TGG - tig0024042:44683-44702 Msa1413620:intron 25.0%
!! ATTTTCTACCATCAAATTTC+AGG - tig0024042:44771-44790 Msa1413620:intron 25.0%
!! ATGATAATGATCAAAAGCTT+TGG - tig0024042:44932-44951 Msa1413620:intron 25.0%
!! TGATAATGATCAAAAGCTTT+GGG - tig0024042:44933-44952 Msa1413620:intron 25.0%
! TGTGCACATATAAATTGTAT+AGG + tig0024042:45472-45491 None:intergenic 25.0%
! GCCCCAAAAAAAATTAAATA+AGG - tig0024042:45645-45664 Msa1413620:CDS 25.0%
!!! AATTATTTTTTTCATCGCAC+GGG - tig0024042:46063-46082 Msa1413620:intron 25.0%
!!! CTTTGCTGTTTTATTTTGTA+TGG - tig0024042:46187-46206 Msa1413620:intron 25.0%
! CAAAACACTAATACTTTCTT+TGG + tig0024042:46392-46411 None:intergenic 25.0%
!!! TCTCTGTTTATTTTGTGATT+TGG - tig0024042:46699-46718 Msa1413620:intron 25.0%
! CATCAAGATTAATCTTTACT+AGG + tig0024042:46731-46750 None:intergenic 25.0%
! TACATTGTACTTATTTGACT+TGG - tig0024042:46845-46864 Msa1413620:intron 25.0%
!! AACTCTGAAAATATTTGTGT+TGG + tig0024042:46884-46903 None:intergenic 25.0%
! CAGATAAACATGATTCATAA+GGG + tig0024042:47333-47352 None:intergenic 25.0%
! TCAGATAAACATGATTCATA+AGG + tig0024042:47334-47353 None:intergenic 25.0%
! TATACACATTTATTGAGCAA+AGG - tig0024042:47421-47440 Msa1413620:intron 25.0%
! TATCACTCATTTAGCATTAT+TGG - tig0024042:47472-47491 Msa1413620:intron 25.0%
!!! AGAGGTTTTTGAAGAAATTT+TGG - tig0024042:47522-47541 Msa1413620:intron 25.0%
! ATCCATACTATTCAAAAACA+TGG - tig0024042:47896-47915 Msa1413620:CDS 25.0%
!!! TTCCATGTTTTTGAATAGTA+TGG + tig0024042:47901-47920 None:intergenic 25.0%
! AGTTTATTCTGCAGATATTA+TGG - tig0024042:48010-48029 Msa1413620:intron 25.0%
! CTTGAAATATAATTGTCCAA+AGG + tig0024042:48038-48057 None:intergenic 25.0%
! CTTTGGACAATTATATTTCA+AGG - tig0024042:48036-48055 Msa1413620:CDS 25.0%
! TTGGACAATTATATTTCAAG+GGG - tig0024042:48038-48057 Msa1413620:CDS 25.0%
! TTCTTTGCATGTAATGAAAT+GGG + tig0024042:48069-48088 None:intergenic 25.0%
!!! TCAATTGTAATTCTGAGATA+CGG + tig0024042:48377-48396 None:intergenic 25.0%
! GAAAAGAAAACATGGTATAA+TGG + tig0024042:48542-48561 None:intergenic 25.0%
! CAATGTTCAAAATAGAAACA+TGG + tig0024042:48568-48587 None:intergenic 25.0%
!!! CATGTTTCTATTTTGAACAT+TGG - tig0024042:48566-48585 Msa1413620:intron 25.0%
!!! TTTTTTTTGCAGATTTCAGA+TGG - tig0024042:48850-48869 Msa1413620:intron 25.0%
! AAACTAATTACGAAGTTTCA+GGG + tig0024042:50010-50029 None:intergenic 25.0%
! AAACAAAGTATGATTCCATT+AGG - tig0024042:50066-50085 Msa1413620:intron 25.0%
! TTACTTTAAGCAAAAGTTCT+GGG + tig0024042:50104-50123 None:intergenic 25.0%
! ATTACTTTAAGCAAAAGTTC+TGG + tig0024042:50105-50124 None:intergenic 25.0%
!! TATTTTATCTTCCAAGAGAA+AGG + tig0024042:50356-50375 None:intergenic 25.0%
!!! GGATCCTTTTATTTTTTTTG+TGG - tig0024042:50561-50580 Msa1413620:CDS 25.0%
!!! TTTTTTGTGGATACAATGAA+AGG - tig0024042:50574-50593 Msa1413620:CDS 25.0%
! ATAGCAATAATGATAGGTAT+TGG + tig0024042:50643-50662 None:intergenic 25.0%
! ATTGATACGTTCATCTAAAA+AGG + tig0024042:51127-51146 None:intergenic 25.0%
GAAGTAGTTGTTATACTTGA+AGG - tig0024042:43464-43483 Msa1413620:three_prime_UTR 30.0%
AAAAGAGTTGGAAGATGATT+GGG + tig0024042:43557-43576 None:intergenic 30.0%
TAAAAGAGTTGGAAGATGAT+TGG + tig0024042:43558-43577 None:intergenic 30.0%
! ACGATGATTTGTAAAAGAGT+TGG + tig0024042:43569-43588 None:intergenic 30.0%
!!! GAAGTTTTTGAAATGAATGG+CGG + tig0024042:43636-43655 None:intergenic 30.0%
GAATGGGAATTATTACAAAC+AGG + tig0024042:43815-43834 None:intergenic 30.0%
! ATAATTCCCATTCCATTTTC+AGG - tig0024042:43822-43841 Msa1413620:three_prime_UTR 30.0%
! TAATTCCCATTCCATTTTCA+GGG - tig0024042:43823-43842 Msa1413620:three_prime_UTR 30.0%
TTTGATCCAATCAAGAAGAT+GGG + tig0024042:43906-43925 None:intergenic 30.0%
AATTCAAATCAGACGAAGAT+AGG - tig0024042:43996-44015 Msa1413620:CDS 30.0%
GGTTATACGTACATATATAG+AGG + tig0024042:44152-44171 None:intergenic 30.0%
ATCAAAATGTATTCAGTGCT+TGG - tig0024042:44261-44280 Msa1413620:CDS 30.0%
!!! GGTGCTGTTTTTAAATGTAT+TGG - tig0024042:44286-44305 Msa1413620:CDS 30.0%
! TCTATGCTTGTTTACAGTTT+TGG - tig0024042:44483-44502 Msa1413620:intron 30.0%
AATGTTTCACAAGCATTATG+CGG - tig0024042:44548-44567 Msa1413620:intron 30.0%
TGACATTCAACAGATTTAAG+TGG + tig0024042:44590-44609 None:intergenic 30.0%
TGGTTAGATATTGAAGAAGT+AGG + tig0024042:44650-44669 None:intergenic 30.0%
TTCTTCAATATCTAACCAAC+AGG - tig0024042:44652-44671 Msa1413620:intron 30.0%
!! TATGATATAGAAGTACCTGT+TGG + tig0024042:44670-44689 None:intergenic 30.0%
CAATATGTCCTGAAATTTGA+TGG + tig0024042:44782-44801 None:intergenic 30.0%
AAAACAAAAGAGAGTGAATC+TGG + tig0024042:45509-45528 None:intergenic 30.0%
! TCCCTTTAAAGACTATATCT+GGG + tig0024042:45610-45629 None:intergenic 30.0%
! ATCCCTTTAAAGACTATATC+TGG + tig0024042:45611-45630 None:intergenic 30.0%
! AATTAGCATGTTCTTTTGTG+TGG + tig0024042:45907-45926 None:intergenic 30.0%
GATTCCAACCTATTAAAACT+TGG + tig0024042:45979-45998 None:intergenic 30.0%
! GCGACATGAAAAAACATTTT+TGG + tig0024042:46262-46281 None:intergenic 30.0%
CTTATATTCTTCCACATGTT+GGG - tig0024042:46289-46308 Msa1413620:intron 30.0%
!! TTTGTTTTCCTGTGAAAAAC+AGG - tig0024042:46507-46526 Msa1413620:CDS 30.0%
AAGCAAAAACAGAATCAATG+CGG + tig0024042:46642-46661 None:intergenic 30.0%
! TCTTTTATTGAAGCTTGCAA+AGG - tig0024042:46667-46686 Msa1413620:intron 30.0%
GTTCTTCAAACTTATGAATG+AGG - tig0024042:46901-46920 Msa1413620:intron 30.0%
! TCGATTTGAACAAAAAGTTG+AGG + tig0024042:47255-47274 None:intergenic 30.0%
TTCTACTTGATTGTATGGAT+TGG - tig0024042:47447-47466 Msa1413620:intron 30.0%
TCTACTTGATTGTATGGATT+GGG - tig0024042:47448-47467 Msa1413620:intron 30.0%
! AGATTATCTTCAGGTTTACT+GGG + tig0024042:47783-47802 None:intergenic 30.0%
!!! ATAAAAGGGTGCTATTTTTC+TGG - tig0024042:47868-47887 Msa1413620:CDS 30.0%
GTTCTTTGCATGTAATGAAA+TGG + tig0024042:48070-48089 None:intergenic 30.0%
AATTCAAAGATCACTTACAG+AGG + tig0024042:48126-48145 None:intergenic 30.0%
AAGACAATTTCAATCAGCTT+TGG + tig0024042:48317-48336 None:intergenic 30.0%
ACATGCACAAATAAGATAGT+TGG - tig0024042:48475-48494 Msa1413620:intron 30.0%
!! CTTTTAAGAAAGAAAGCAAC+AGG + tig0024042:48503-48522 None:intergenic 30.0%
TTGCTTTCTTTCTTAAAAGC+TGG - tig0024042:48504-48523 Msa1413620:intron 30.0%
! TGGATGCATCTAATTTTGTA+TGG - tig0024042:48626-48645 Msa1413620:intron 30.0%
AATAAATTTCATCCGACAAG+TGG + tig0024042:48729-48748 None:intergenic 30.0%
CTTAGCATATTGCAAAAGTT+AGG - tig0024042:48898-48917 Msa1413620:intron 30.0%
CATCAGAAATCTTCAATCTT+TGG - tig0024042:48926-48945 Msa1413620:intron 30.0%
AAGTATGGAGTAAGTAATTG+AGG + tig0024042:49041-49060 None:intergenic 30.0%
TGCAATGTGAAAACAAAGTA+TGG + tig0024042:49056-49075 None:intergenic 30.0%
!!! ACTTGTGACTATTTTTATGC+AGG - tig0024042:49121-49140 Msa1413620:intron 30.0%
!!! CTTGTGACTATTTTTATGCA+GGG - tig0024042:49122-49141 Msa1413620:intron 30.0%
CAATAGTAGAGAAACAGAAA+TGG + tig0024042:49407-49426 None:intergenic 30.0%
ACTTAGAAAATTGACTGATC+AGG - tig0024042:49585-49604 Msa1413620:intron 30.0%
!!! TTTCTTTTTTGCATGCAGAT+TGG + tig0024042:49685-49704 None:intergenic 30.0%
AATCTGCATGCAAAAAAGAA+AGG - tig0024042:49684-49703 Msa1413620:CDS 30.0%
!! ATTTCTAGCAATAACGAACT+TGG + tig0024042:49750-49769 None:intergenic 30.0%
! CCTCACAAAATTGACTTATA+AGG + tig0024042:49977-49996 None:intergenic 30.0%
! CCTTATAAGTCAATTTTGTG+AGG - tig0024042:49974-49993 Msa1413620:CDS 30.0%
GAAACTAATTACGAAGTTTC+AGG + tig0024042:50011-50030 None:intergenic 30.0%
!! AAACTTGTTTTCCTTTCTCT+TGG - tig0024042:50342-50361 Msa1413620:intron 30.0%
GAAACCTTTAACATGCTTTA+AGG + tig0024042:50615-50634 None:intergenic 30.0%
ATAAGAGAACTCAAGTGTTT+GGG + tig0024042:50750-50769 None:intergenic 30.0%
CTTCATCTCTTACAAAGAAT+GGG + tig0024042:50935-50954 None:intergenic 30.0%
TCTTCATCTCTTACAAAGAA+TGG + tig0024042:50936-50955 None:intergenic 30.0%
ATTCTTTGTAAGAGATGAAG+AGG - tig0024042:50935-50954 Msa1413620:CDS 30.0%
TTCTTTGTAAGAGATGAAGA+GGG - tig0024042:50936-50955 Msa1413620:CDS 30.0%
ATACGTTCATCTAAAAAGGA+AGG + tig0024042:51123-51142 None:intergenic 30.0%
! ATAGTTTGGGTTTACTATGT+TGG + tig0024042:51538-51557 None:intergenic 30.0%
! CTAGTTAGTTTACTGACAGA+CGG + tig0024042:43419-43438 None:intergenic 35.0%
GTCTGTCAGTAAACTAACTA+GGG - tig0024042:43418-43437 Msa1413620:three_prime_UTR 35.0%
! GGTTTAGTTTAGAAGAGAGA+TGG - tig0024042:43439-43458 Msa1413620:three_prime_UTR 35.0%
AAGGAAGTTGAGGTAAAAAG+AGG + tig0024042:43733-43752 None:intergenic 35.0%
ATAGCATACCTCAAAAGAGA+AGG + tig0024042:43752-43771 None:intergenic 35.0%
TTGAACCCTGAAAATGGAAT+GGG + tig0024042:43831-43850 None:intergenic 35.0%
!! CGGAATGAAGAATAGTTTTG+AGG + tig0024042:43865-43884 None:intergenic 35.0%
TTGATCCAATCAAGAAGATG+GGG + tig0024042:43905-43924 None:intergenic 35.0%
GTTTGATCCAATCAAGAAGA+TGG + tig0024042:43907-43926 None:intergenic 35.0%
TGTCTCGTGAATAATGTGAT+AGG + tig0024042:44029-44048 None:intergenic 35.0%
AAATGTATTCAGTGCTTGGA+TGG - tig0024042:44265-44284 Msa1413620:CDS 35.0%
! GTTGGTGGAAACTCAAAAAA+TGG - tig0024042:44366-44385 Msa1413620:intron 35.0%
TTCTAAACAGACTCTACACT+CGG - tig0024042:44399-44418 Msa1413620:intron 35.0%
ATGTTTCACAAGCATTATGC+GGG - tig0024042:44549-44568 Msa1413620:intron 35.0%
ATGAAATGACACCACTAAAG+AGG + tig0024042:44697-44716 None:intergenic 35.0%
CATTTAACAGAGCAGCTAAT+AGG + tig0024042:44746-44765 None:intergenic 35.0%
CTATTAGCTGCTCTGTTAAA+TGG - tig0024042:44744-44763 Msa1413620:intron 35.0%
TATCATTGAAGCACATGAGA+GGG + tig0024042:44918-44937 None:intergenic 35.0%
TTATCATTGAAGCACATGAG+AGG + tig0024042:44919-44938 None:intergenic 35.0%
AAGATCCACATGAGTATGTT+AGG - tig0024042:44959-44978 Msa1413620:intron 35.0%
! AAGGCTATGGTAAGTCTTAT+TGG - tig0024042:44983-45002 Msa1413620:intron 35.0%
TTGAAGACTTGTATAGTCCT+AGG - tig0024042:45086-45105 Msa1413620:intron 35.0%
CAACTCACTCATAAAATCCA+CGG + tig0024042:45119-45138 None:intergenic 35.0%
CTATAAGACCTGTATTCTAC+TGG + tig0024042:45295-45314 None:intergenic 35.0%
! CAGTAGAATACAGGTCTTAT+AGG - tig0024042:45293-45312 Msa1413620:CDS 35.0%
CGCTCAAGTTCAGATTTATA+GGG + tig0024042:45379-45398 None:intergenic 35.0%
ACGCTCAAGTTCAGATTTAT+AGG + tig0024042:45380-45399 None:intergenic 35.0%
TGTGTGTGGATATTGTGAAA+TGG + tig0024042:45563-45582 None:intergenic 35.0%
ATTTCACAATATCCACACAC+AGG - tig0024042:45562-45581 Msa1413620:intron 35.0%
TTTCACAATATCCACACACA+GGG - tig0024042:45563-45582 Msa1413620:intron 35.0%
!! GGCCTACAAATTTGTTAAGA+CGG + tig0024042:45589-45608 None:intergenic 35.0%
GCCCAGATATAGTCTTTAAA+GGG - tig0024042:45606-45625 Msa1413620:CDS 35.0%
ATGAAAAAAACACACTGGTG+AGG - tig0024042:45685-45704 Msa1413620:CDS 35.0%
TCCGTATCCGATAAATGATT+TGG - tig0024042:45932-45951 Msa1413620:CDS 35.0%
CCCAAATCATTTATCGGATA+CGG + tig0024042:45936-45955 None:intergenic 35.0%
CCGTATCCGATAAATGATTT+GGG - tig0024042:45933-45952 Msa1413620:CDS 35.0%
GTAGCACCCAAATCATTTAT+CGG + tig0024042:45942-45961 None:intergenic 35.0%
! ATTTGGGTGCTACAAAAGTT+GGG - tig0024042:45949-45968 Msa1413620:CDS 35.0%
!! GCATCCAAGTTTTAATAGGT+TGG - tig0024042:45972-45991 Msa1413620:CDS 35.0%
GTGTACATTTACATTTCAGC+AGG + tig0024042:46240-46259 None:intergenic 35.0%
CATGTGGAAGAATATAAGGT+TGG + tig0024042:46287-46306 None:intergenic 35.0%
CCAACATGTGGAAGAATATA+AGG + tig0024042:46291-46310 None:intergenic 35.0%
CCTTATATTCTTCCACATGT+TGG - tig0024042:46288-46307 Msa1413620:intron 35.0%
TCTCAGATCAGAACAATTTC+CGG - tig0024042:46566-46585 Msa1413620:CDS 35.0%
TTTATTGAAGCTTGCAAAGG+TGG - tig0024042:46670-46689 Msa1413620:intron 35.0%
TGGTACGTGCATGAAAAAAT+TGG - tig0024042:46820-46839 Msa1413620:intron 35.0%
TGAAGACCTTGTGTTTACTT+TGG - tig0024042:46931-46950 Msa1413620:intron 35.0%
TAGTCTCCAAAGTAAACACA+AGG + tig0024042:46940-46959 None:intergenic 35.0%
! GTTTACTTTGGAGACTATTG+TGG - tig0024042:46943-46962 Msa1413620:intron 35.0%
CAAAACAAGGACATCATTCT+TGG + tig0024042:47054-47073 None:intergenic 35.0%
!! CAAGAATGATGTCCTTGTTT+TGG - tig0024042:47052-47071 Msa1413620:intron 35.0%
!!! AATGATGTCCTTGTTTTGGA+TGG - tig0024042:47056-47075 Msa1413620:intron 35.0%
AATACTAGCCATCCAAAACA+AGG + tig0024042:47067-47086 None:intergenic 35.0%
GTTAACATGCTACGCATTAT+GGG + tig0024042:47291-47310 None:intergenic 35.0%
TGTTAACATGCTACGCATTA+TGG + tig0024042:47292-47311 None:intergenic 35.0%
TGTTTATCTGAATGACTCTG+AGG - tig0024042:47343-47362 Msa1413620:intron 35.0%
GGAGATTCTACTTGATTGTA+TGG - tig0024042:47442-47461 Msa1413620:intron 35.0%
! CTACTTGATTGTATGGATTG+GGG - tig0024042:47449-47468 Msa1413620:intron 35.0%
TTTCTCTCCAACAATATCAC+TGG - tig0024042:47567-47586 Msa1413620:CDS 35.0%
!!! CAAAGTACTGAACTTTTGGA+AGG + tig0024042:47707-47726 None:intergenic 35.0%
CTTCCAAAAGTTCAGTACTT+TGG - tig0024042:47705-47724 Msa1413620:CDS 35.0%
!!! AGTCCAAAGTACTGAACTTT+TGG + tig0024042:47711-47730 None:intergenic 35.0%
! GAGATTATCTTCAGGTTTAC+TGG + tig0024042:47784-47803 None:intergenic 35.0%
TGCAGATATTATGGTTCCTT+TGG - tig0024042:48019-48038 Msa1413620:intron 35.0%
ATTGAACGTTTGCATAGAAC+TGG - tig0024042:48392-48411 Msa1413620:intron 35.0%
GAAATGTCTTCTCATTCAAG+TGG - tig0024042:48427-48446 Msa1413620:intron 35.0%
! CTTAAAAGCTGGATTTTCGA+TGG - tig0024042:48515-48534 Msa1413620:intron 35.0%
! CATGGGTTGAAAAGAAAACA+TGG + tig0024042:48550-48569 None:intergenic 35.0%
ACCAAATGCAACTTCATAAG+AGG - tig0024042:48823-48842 Msa1413620:intron 35.0%
TCCTCTTATGAAGTTGCATT+TGG + tig0024042:48827-48846 None:intergenic 35.0%
CAATATGCTAAGAGTCAATG+TGG + tig0024042:48890-48909 None:intergenic 35.0%
! GTGTGCGTGCTAATTTTAAA+AGG - tig0024042:48980-48999 Msa1413620:intron 35.0%
TATTGTGTGTAGCTATGTGA+AGG - tig0024042:49084-49103 Msa1413620:intron 35.0%
!!! CTATTTTTATGCAGGGAACA+TGG - tig0024042:49129-49148 Msa1413620:intron 35.0%
AGAAAATGACGACGATGATA+TGG - tig0024042:49465-49484 Msa1413620:CDS 35.0%
! TCAAACTGATGATGAAGATG+AGG - tig0024042:49495-49514 Msa1413620:CDS 35.0%
AGTCTTCGGAATTATATCCA+CGG + tig0024042:49612-49631 None:intergenic 35.0%
GCAAATGTTCTTTGAGTCTT+CGG + tig0024042:49626-49645 None:intergenic 35.0%
AAATGGCGAATACTTCTACT+GGG + tig0024042:50139-50158 None:intergenic 35.0%
AAAATGGCGAATACTTCTAC+TGG + tig0024042:50140-50159 None:intergenic 35.0%
TAGTTCAGTGAACCTACATA+AGG - tig0024042:50211-50230 Msa1413620:CDS 35.0%
CATTTGCAATGTCATCCAAT+AGG - tig0024042:50456-50475 Msa1413620:CDS 35.0%
AAGGATCCACTTCATCAATT+GGG + tig0024042:50549-50568 None:intergenic 35.0%
AAAGGATCCACTTCATCAAT+TGG + tig0024042:50550-50569 None:intergenic 35.0%
TGCACCTTAAAGCATGTTAA+AGG - tig0024042:50608-50627 Msa1413620:intron 35.0%
GATAAGAGAACTCAAGTGTT+TGG + tig0024042:50751-50770 None:intergenic 35.0%
TCTTATCAAGCTCTTGCAAA+TGG - tig0024042:50764-50783 Msa1413620:CDS 35.0%
TGAGATTGAGAAGGAAAAGT+CGG - tig0024042:50817-50836 Msa1413620:CDS 35.0%
! ACCACAGATTCTTAAGCTTT+TGG - tig0024042:50854-50873 Msa1413620:CDS 35.0%
TCCAAAAGCTTAAGAATCTG+TGG + tig0024042:50858-50877 None:intergenic 35.0%
GAGGGTTGCATATTTATTTC+AGG - tig0024042:50954-50973 Msa1413620:CDS 35.0%
!! CAACATCCTCTGAAATCAAT+GGG + tig0024042:51067-51086 None:intergenic 35.0%
!!! ACTCCTTTTCACTTTTTTCG+TGG - tig0024042:51165-51184 Msa1413620:CDS 35.0%
GATCCACGAAAAAAGTGAAA+AGG + tig0024042:51171-51190 None:intergenic 35.0%
AATTTACCCATCTATGTGAC+AGG + tig0024042:51298-51317 None:intergenic 35.0%
TGTCACATAGATGGGTAAAT+TGG - tig0024042:51297-51316 Msa1413620:CDS 35.0%
GTCACATAGATGGGTAAATT+GGG - tig0024042:51298-51317 Msa1413620:CDS 35.0%
TCACATAGATGGGTAAATTG+GGG - tig0024042:51299-51318 Msa1413620:CDS 35.0%
AAATTGCCTATACCAACCAT+TGG + tig0024042:51328-51347 None:intergenic 35.0%
CACTGGATTTATACTCTCAA+CGG + tig0024042:51415-51434 None:intergenic 35.0%
TAGAAAAGTTATGGAGTGAC+TGG + tig0024042:51492-51511 None:intergenic 35.0%
CGTCTGTCAGTAAACTAACT+AGG - tig0024042:43417-43436 Msa1413620:three_prime_UTR 40.0%
TCCGAATCCGAATGAAAGAA+AGG - tig0024042:43496-43515 Msa1413620:three_prime_UTR 40.0%
GCCTTTCTTTCATTCGGATT+CGG + tig0024042:43500-43519 None:intergenic 40.0%
TCAGCAGCCTTTCTTTCATT+CGG + tig0024042:43506-43525 None:intergenic 40.0%
AAAGAAAGGCTGCTGAACAA+AGG - tig0024042:43510-43529 Msa1413620:three_prime_UTR 40.0%
GAAGATGATTGGGTGCATAT+TGG + tig0024042:43547-43566 None:intergenic 40.0%
TCGCCGATAAAGACTTTGTT+AGG - tig0024042:43696-43715 Msa1413620:three_prime_UTR 40.0%
CTCAAAAGAGAAGGAAGTTG+AGG + tig0024042:43743-43762 None:intergenic 40.0%
! CTCAACTTCCTTCTCTTTTG+AGG - tig0024042:43741-43760 Msa1413620:three_prime_UTR 40.0%
GTTGAACCCTGAAAATGGAA+TGG + tig0024042:43832-43851 None:intergenic 40.0%
!! TCCATTTTCAGGGTTCAACT+TGG - tig0024042:43833-43852 Msa1413620:three_prime_UTR 40.0%
! ACCAAGTTGAACCCTGAAAA+TGG + tig0024042:43837-43856 None:intergenic 40.0%
AAGAATGCGGAGAACGAATA+AGG + tig0024042:43963-43982 None:intergenic 40.0%
TCGTGAATAATGTGATAGGC+AGG + tig0024042:44025-44044 None:intergenic 40.0%
AGATCAGCTACTTGAATGGA+TGG + tig0024042:44100-44119 None:intergenic 40.0%
GATGAGATCAGCTACTTGAA+TGG + tig0024042:44104-44123 None:intergenic 40.0%
ATCCTGATCTTCGCAAATCA+TGG - tig0024042:44342-44361 Msa1413620:CDS 40.0%
TCCTGATCTTCGCAAATCAT+GGG - tig0024042:44343-44362 Msa1413620:CDS 40.0%
!!! GAGCAAATGCCTTGTTTTCA+GGG + tig0024042:44527-44546 None:intergenic 40.0%
!!! TGAGCAAATGCCTTGTTTTC+AGG + tig0024042:44528-44547 None:intergenic 40.0%
TGTTTCACAAGCATTATGCG+GGG - tig0024042:44550-44569 Msa1413620:intron 40.0%
!! AGTAGGTTGATAACTCTGTC+AGG + tig0024042:44633-44652 None:intergenic 40.0%
CCTTTCCTAACATACTCATG+TGG + tig0024042:44967-44986 None:intergenic 40.0%
CCACATGAGTATGTTAGGAA+AGG - tig0024042:44964-44983 Msa1413620:intron 40.0%
GAGTATGTTAGGAAAGGCTA+TGG - tig0024042:44970-44989 Msa1413620:intron 40.0%
! CGTGGATTTTATGAGTGAGT+TGG - tig0024042:45117-45136 Msa1413620:intron 40.0%
GTGCTTCATCATACCTAGAA+TGG + tig0024042:45273-45292 None:intergenic 40.0%
! ATGAAGCACCAGTAGAATAC+AGG - tig0024042:45284-45303 Msa1413620:CDS 40.0%
! AGGTCTTATAGGCAGAAAGA+TGG - tig0024042:45304-45323 Msa1413620:CDS 40.0%
!! ATGGAGCTCTTCTTGCTATT+GGG - tig0024042:45323-45342 Msa1413620:CDS 40.0%
TTGTATAGGAAACCGTACCT+TGG + tig0024042:45458-45477 None:intergenic 40.0%
GGCCGTCTTAACAAATTTGT+AGG - tig0024042:45584-45603 Msa1413620:CDS 40.0%
GGCCCAGATATAGTCTTTAA+AGG - tig0024042:45605-45624 Msa1413620:CDS 40.0%
ATCCGATTGCAATACTTCAG+AGG + tig0024042:45751-45770 None:intergenic 40.0%
! TTTGGGCCCCAAAAATTTTG+AGG - tig0024042:45836-45855 Msa1413620:intron 40.0%
! CATGTTCTTTTGTGTGGACA+GGG + tig0024042:45901-45920 None:intergenic 40.0%
! GATTTGGGTGCTACAAAAGT+TGG - tig0024042:45948-45967 Msa1413620:CDS 40.0%
! TTTGGGTGCTACAAAAGTTG+GGG - tig0024042:45950-45969 Msa1413620:CDS 40.0%
!! TGGGGCATCCAAGTTTTAAT+AGG - tig0024042:45968-45987 Msa1413620:CDS 40.0%
TTCTTTCAAGGAAAGTCAGG+AGG + tig0024042:46110-46129 None:intergenic 40.0%
TCCTGACTTTCCTTGAAAGA+AGG - tig0024042:46109-46128 Msa1413620:intron 40.0%
ACCTTCTTTCAAGGAAAGTC+AGG + tig0024042:46113-46132 None:intergenic 40.0%
TCCTTGAAAGAAGGTAAGAG+AGG - tig0024042:46118-46137 Msa1413620:intron 40.0%
TCCTCTCTTACCTTCTTTCA+AGG + tig0024042:46122-46141 None:intergenic 40.0%
ACATGTTGGGTTATAGCCAA+GGG - tig0024042:46302-46321 Msa1413620:intron 40.0%
CTGATCTGAGAAGCTAATGT+GGG + tig0024042:46557-46576 None:intergenic 40.0%
TCTGATCTGAGAAGCTAATG+TGG + tig0024042:46558-46577 None:intergenic 40.0%
AGATCAGAACAATTTCCGGA+AGG - tig0024042:46570-46589 Msa1413620:intron 40.0%
AAAACAGAATCAATGCGGAC+AGG + tig0024042:46637-46656 None:intergenic 40.0%
! TTTTCATGCACGTACCATCA+AGG + tig0024042:46817-46836 None:intergenic 40.0%
GAGACTATTGTGGACAAGTT+TGG - tig0024042:46953-46972 Msa1413620:intron 40.0%
! GGACAAGTTTGGTGAAGAAA+TGG - tig0024042:46964-46983 Msa1413620:intron 40.0%
AAATGGCACCTTATGCACTT+GGG - tig0024042:46981-47000 Msa1413620:intron 40.0%
ACTTGGGCTATGCCAAAATT+TGG - tig0024042:46997-47016 Msa1413620:intron 40.0%
GCTCTTTCCTTTCTCAACAA+AGG - tig0024042:47104-47123 Msa1413620:intron 40.0%
! CGCTGATGATTCAAGTTCAA+TGG - tig0024042:47173-47192 Msa1413620:intron 40.0%
ATGTTAACAACCGATGGTCA+AGG - tig0024042:47303-47322 Msa1413620:CDS 40.0%
TAAGGGAATACCTTGACCAT+CGG + tig0024042:47316-47335 None:intergenic 40.0%
CACATGTCCAGTGATATTGT+TGG + tig0024042:47577-47596 None:intergenic 40.0%
CAACAATATCACTGGACATG+TGG - tig0024042:47575-47594 Msa1413620:CDS 40.0%
GATAGTGCTTCCATCATCAA+TGG + tig0024042:47610-47629 None:intergenic 40.0%
!! TGATGGAAGCACTATCAGAT+TGG - tig0024042:47614-47633 Msa1413620:CDS 40.0%
!! GATGGAAGCACTATCAGATT+GGG - tig0024042:47615-47634 Msa1413620:CDS 40.0%
CCATAGCTGAGATTATCTTC+AGG + tig0024042:47792-47811 None:intergenic 40.0%
CCTGAAGATAATCTCAGCTA+TGG - tig0024042:47789-47808 Msa1413620:intron 40.0%
ACTTAAATGTCAGAGCAACC+AGG + tig0024042:47941-47960 None:intergenic 40.0%
!! CACAAACACTGTTGATAGTC+AGG + tig0024042:48092-48111 None:intergenic 40.0%
CTGACTATCAACAGTGTTTG+TGG - tig0024042:48090-48109 Msa1413620:intron 40.0%
ATTGTCTTCCTAAACTGCAG+AGG - tig0024042:48329-48348 Msa1413620:intron 40.0%
GTCTTCTCATTCAAGTGGTA+AGG - tig0024042:48432-48451 Msa1413620:intron 40.0%
TCTTGACTTCTTGCAGCATT+TGG + tig0024042:48954-48973 None:intergenic 40.0%
AGTAAGTAATTGAGGCAAGG+AGG + tig0024042:49033-49052 None:intergenic 40.0%
TGGAGTAAGTAATTGAGGCA+AGG + tig0024042:49036-49055 None:intergenic 40.0%
TCCTCAACATGTCAGAGTTA+CGG + tig0024042:49344-49363 None:intergenic 40.0%
AATGACGACGATGATATGGA+CGG - tig0024042:49469-49488 Msa1413620:CDS 40.0%
!! TTAAGCAAAAGTTCTGGGCA+GGG + tig0024042:50099-50118 None:intergenic 40.0%
!! TTTAAGCAAAAGTTCTGGGC+AGG + tig0024042:50100-50119 None:intergenic 40.0%
ATCGGTTAAGCACCTTATGT+AGG + tig0024042:50226-50245 None:intergenic 40.0%
CACAAAATTGTGTAGCTGGA+TGG + tig0024042:50257-50276 None:intergenic 40.0%
! CATCCAGCTACACAATTTTG+TGG - tig0024042:50255-50274 Msa1413620:CDS 40.0%
CAACCACAAAATTGTGTAGC+TGG + tig0024042:50261-50280 None:intergenic 40.0%
! AATTTTGTGGTTGAACCAGC+TGG - tig0024042:50268-50287 Msa1413620:CDS 40.0%
TCCAATAGGAAACGTCATTC+AGG - tig0024042:50470-50489 Msa1413620:CDS 40.0%
AGGATCCACTTCATCAATTG+GGG + tig0024042:50548-50567 None:intergenic 40.0%
!! CATGCTTTAAGGTGCAGTAT+CGG + tig0024042:50604-50623 None:intergenic 40.0%
TGCAATCATCAGATCCAATG+AGG - tig0024042:50711-50730 Msa1413620:CDS 40.0%
!!! GTCAGGTTTTGAAACCTCAT+TGG + tig0024042:50728-50747 None:intergenic 40.0%
! AGCTTTTGGATGTACGTTGT+TGG - tig0024042:50868-50887 Msa1413620:CDS 40.0%
TCTTACAAAGAATGGGTGCA+AGG + tig0024042:50928-50947 None:intergenic 40.0%
!! CCAACATCCTCTGAAATCAA+TGG + tig0024042:51068-51087 None:intergenic 40.0%
!! CCATTGATTTCAGAGGATGT+TGG - tig0024042:51065-51084 Msa1413620:intron 40.0%
TTTCAGAGGATGTTGGATTC+AGG - tig0024042:51072-51091 Msa1413620:intron 40.0%
ATGTTGGATTCAGGAAACTG+TGG - tig0024042:51081-51100 Msa1413620:intron 40.0%
GAAAAGGAGTAGAACAACGA+CGG + tig0024042:51155-51174 None:intergenic 40.0%
TCTTCTACCTGTCACATAGA+TGG - tig0024042:51288-51307 Msa1413620:CDS 40.0%
CTTCTACCTGTCACATAGAT+GGG - tig0024042:51289-51308 Msa1413620:CDS 40.0%
CTGTTAAACGCATTGCTGAT+GGG + tig0024042:51438-51457 None:intergenic 40.0%
GTGAAGCAAAGAAGAGGAAG+TGG - tig0024042:43310-43329 Msa1413620:three_prime_UTR 45.0%
CAAAGAAGAGGAAGTGGAGT+GGG - tig0024042:43316-43335 Msa1413620:three_prime_UTR 45.0%
AAAGAAGAGGAAGTGGAGTG+GGG - tig0024042:43317-43336 Msa1413620:three_prime_UTR 45.0%
AGTTTACTGACAGACGGAGA+GGG + tig0024042:43413-43432 None:intergenic 45.0%
TAGTTTACTGACAGACGGAG+AGG + tig0024042:43414-43433 None:intergenic 45.0%
AAAGGCTGCTGAACAAAGGT+TGG - tig0024042:43514-43533 Msa1413620:three_prime_UTR 45.0%
GAAAGAGATTGAGTGAGCAG+TGG + tig0024042:43678-43697 None:intergenic 45.0%
AATCAAGAAGATGGGGACAG+TGG + tig0024042:43898-43917 None:intergenic 45.0%
ACTGTCCCCATCTTCTTGAT+TGG - tig0024042:43897-43916 Msa1413620:intron 45.0%
GAATGGATGGATCAGGAATC+TGG + tig0024042:44087-44106 None:intergenic 45.0%
GCTACTTGAATGGATGGATC+AGG + tig0024042:44094-44113 None:intergenic 45.0%
! TCAACAGGTTGACCTTCCAA+GGG + tig0024042:44323-44342 None:intergenic 45.0%
! ATCAACAGGTTGACCTTCCA+AGG + tig0024042:44324-44343 None:intergenic 45.0%
TTGCGAAGATCAGGATCAAC+AGG + tig0024042:44338-44357 None:intergenic 45.0%
CCTGATCTTCGCAAATCATG+GGG - tig0024042:44344-44363 Msa1413620:CDS 45.0%
ATCTTCGCAAATCATGGGGT+TGG - tig0024042:44348-44367 Msa1413620:CDS 45.0%
! GCATTATGCGGGGAAGATTT+TGG - tig0024042:44560-44579 Msa1413620:intron 45.0%
CTGTTGAATGTCATTCGAGC+AGG - tig0024042:44597-44616 Msa1413620:intron 45.0%
TTGAATGTCATTCGAGCAGG+TGG - tig0024042:44600-44619 Msa1413620:intron 45.0%
AAAAGAAGAACGTCAAGCCG+AGG + tig0024042:44883-44902 None:intergenic 45.0%
CTCACTCATAAAATCCACGG+AGG + tig0024042:45116-45135 None:intergenic 45.0%
! GATGGAGCTCTTCTTGCTAT+TGG - tig0024042:45322-45341 Msa1413620:CDS 45.0%
GAAGCTTGTGTTTGGGTGTA+TGG + tig0024042:45724-45743 None:intergenic 45.0%
ATTGCAATACTTCAGAGGCG+CGG + tig0024042:45746-45765 None:intergenic 45.0%
!! CGCCTCTGAAGTATTGCAAT+CGG - tig0024042:45746-45765 Msa1413620:intron 45.0%
! ACCGGGCCTCAAAATTTTTG+GGG + tig0024042:45845-45864 None:intergenic 45.0%
! CACCGGGCCTCAAAATTTTT+GGG + tig0024042:45846-45865 None:intergenic 45.0%
! TCACCGGGCCTCAAAATTTT+TGG + tig0024042:45847-45866 None:intergenic 45.0%
! GCATGTTCTTTTGTGTGGAC+AGG + tig0024042:45902-45921 None:intergenic 45.0%
!!! TTTTTTTCATCGCACGGGTG+TGG - tig0024042:46068-46087 Msa1413620:intron 45.0%
CTTGGCTATAACCCAACATG+TGG + tig0024042:46303-46322 None:intergenic 45.0%
CACATGTTGGGTTATAGCCA+AGG - tig0024042:46301-46320 Msa1413620:intron 45.0%
!! GCACTAGCTCTACTTCAATG+AGG + tig0024042:46332-46351 None:intergenic 45.0%
CAACACATTGCAATGCCTTC+CGG + tig0024042:46588-46607 None:intergenic 45.0%
GCATTGCAATGTGTTGTCTG+TGG - tig0024042:46592-46611 Msa1413620:intron 45.0%
GAAATGGCACCTTATGCACT+TGG - tig0024042:46980-46999 Msa1413620:intron 45.0%
! CAACAAAGGCTGCTGCATTT+TGG - tig0024042:47118-47137 Msa1413620:intron 45.0%
TCAAGTTCAATGGCTGCAGT+TGG - tig0024042:47183-47202 Msa1413620:intron 45.0%
CGTAGCATGTTAACAACCGA+TGG - tig0024042:47297-47316 Msa1413620:CDS 45.0%
ACTTCTACGCATGCTTACAG+AGG - tig0024042:47504-47523 Msa1413620:intron 45.0%
GAACCTTTGGCCATTGATGA+TGG - tig0024042:47597-47616 Msa1413620:CDS 45.0%
CTTCCATCATCAATGGCCAA+AGG + tig0024042:47603-47622 None:intergenic 45.0%
! GTGCGTGGGTTATAAGAAGT+TGG - tig0024042:48606-48625 Msa1413620:intron 45.0%
AACTGCTACGAACCACTTGT+CGG - tig0024042:48714-48733 Msa1413620:intron 45.0%
CTGCAAGAAGTCAAGAAGAG+TGG - tig0024042:48958-48977 Msa1413620:intron 45.0%
AGTAATTGAGGCAAGGAGGA+GGG + tig0024042:49029-49048 None:intergenic 45.0%
AAGTAATTGAGGCAAGGAGG+AGG + tig0024042:49030-49049 None:intergenic 45.0%
CCAGCAAGGATGTTAAACCA+AGG + tig0024042:49170-49189 None:intergenic 45.0%
CCTTGGTTTAACATCCTTGC+TGG - tig0024042:49167-49186 Msa1413620:intron 45.0%
TGATCTCCTGGTTGCATACA+AGG - tig0024042:49248-49267 Msa1413620:intron 45.0%
CTTGATCCTTGTATGCAACC+AGG + tig0024042:49257-49276 None:intergenic 45.0%
! GCATACAAGGATCAAGTTGC+AGG - tig0024042:49261-49280 Msa1413620:intron 45.0%
TCCGTAACTCTGACATGTTG+AGG - tig0024042:49340-49359 Msa1413620:intron 45.0%
GATGAAGATGAGGATGACAG+TGG - tig0024042:49505-49524 Msa1413620:CDS 45.0%
!! AGTGGTTCTGACAGGGAAAT+GGG - tig0024042:49523-49542 Msa1413620:CDS 45.0%
ATGGGAACTGATGCTGAAGA+TGG - tig0024042:49541-49560 Msa1413620:CDS 45.0%
TGGGAACTGATGCTGAAGAT+GGG - tig0024042:49542-49561 Msa1413620:CDS 45.0%
AAATTGACTGATCAGGTCCG+TGG - tig0024042:49592-49611 Msa1413620:intron 45.0%
AAAGGTTGCAATCTGCACAC+AGG - tig0024042:49702-49721 Msa1413620:CDS 45.0%
AGCTGGATGGTTTACTGGAT+CGG + tig0024042:50244-50263 None:intergenic 45.0%
TGTGTAGCTGGATGGTTTAC+TGG + tig0024042:50249-50268 None:intergenic 45.0%
ATAGTTCGACACAAACCAGC+TGG + tig0024042:50286-50305 None:intergenic 45.0%
GCCTGAATGACGTTTCCTAT+TGG + tig0024042:50474-50493 None:intergenic 45.0%
TCATCTGAGTCCTCATCATC+GGG + tig0024042:50496-50515 None:intergenic 45.0%
GTCATCTGAGTCCTCATCAT+CGG + tig0024042:50497-50516 None:intergenic 45.0%
ACAGTCCCCAATTGATGAAG+TGG - tig0024042:50540-50559 Msa1413620:CDS 45.0%
AGAACTCAAGTGTTTGGGTC+AGG + tig0024042:50745-50764 None:intergenic 45.0%
GAGAAGAGGTGAGATTGAGA+AGG - tig0024042:50808-50827 Msa1413620:CDS 45.0%
! CAGGCATTTATTTGGCTCAG+CGG - tig0024042:50973-50992 Msa1413620:CDS 45.0%
! AGCGGTCAAAGTTGGTCTAT+GGG - tig0024042:50991-51010 Msa1413620:CDS 45.0%
!! GAGGTTCCCATTGATTTCAG+AGG - tig0024042:51058-51077 Msa1413620:intron 45.0%
TTTCGTGGATCCTTCCTTTC+AGG - tig0024042:51180-51199 Msa1413620:CDS 45.0%
ACTTGGCATGGAAACCTGAA+AGG + tig0024042:51197-51216 None:intergenic 45.0%
GGTTTCCATGCCAAGTTTCA+CGG - tig0024042:51201-51220 Msa1413620:CDS 45.0%
ATGCTGGAAACCGTGAAACT+TGG + tig0024042:51214-51233 None:intergenic 45.0%
GTTTCACGGTTTCCAGCATA+TGG - tig0024042:51215-51234 Msa1413620:CDS 45.0%
GAAGCCATTGCTGCACTAAT+CGG + tig0024042:51249-51268 None:intergenic 45.0%
CCTGTTAAACGCATTGCTGA+TGG + tig0024042:51439-51458 None:intergenic 45.0%
CCATCAGCAATGCGTTTAAC+AGG - tig0024042:51436-51455 Msa1413620:five_prime_UTR 45.0%
AAAGTTATGGAGTGACTGGC+TGG + tig0024042:51488-51507 None:intergenic 45.0%
!!! AATATATTTTTTTGTATTTA+AGG + tig0024042:45817-45836 None:intergenic 5.0%
!!! AAATACAAAAAAATATATTT+TGG - tig0024042:45818-45837 Msa1413620:intron 5.0%
!!! AATACAAAAAAATATATTTT+GGG - tig0024042:45819-45838 Msa1413620:intron 5.0%
GCGAGTGTGAAGCAAAGAAG+AGG - tig0024042:43304-43323 Msa1413620:three_prime_UTR 50.0%
GCAAAGAAGAGGAAGTGGAG+TGG - tig0024042:43315-43334 Msa1413620:three_prime_UTR 50.0%
TTGTACAGCTAGCTGAGCTG+AGG - tig0024042:43353-43372 Msa1413620:three_prime_UTR 50.0%
AATGGCGGCAACTTGTCTGA+GGG + tig0024042:43621-43640 None:intergenic 50.0%
AGTGCGAGTGCAATGGAGAA+TGG + tig0024042:43783-43802 None:intergenic 50.0%
AAGAAGATGGGGACAGTGGT+CGG + tig0024042:43894-43913 None:intergenic 50.0%
! CCCCATGATTTGCGAAGATC+AGG + tig0024042:44347-44366 None:intergenic 50.0%
TTCGCAAATCATGGGGTTGG+TGG - tig0024042:44351-44370 Msa1413620:CDS 50.0%
GCTGCGAAACCCTGAAAACA+AGG - tig0024042:44515-44534 Msa1413620:intron 50.0%
! GAGCAGCTAATAGGTGTCAC+AGG + tig0024042:44737-44756 None:intergenic 50.0%
TGTATACTGTGCTGCAGCCT+CGG - tig0024042:44863-44882 Msa1413620:intron 50.0%
!! TGAGTTGGTTCGAAAGCGCA+GGG - tig0024042:45132-45151 Msa1413620:intron 50.0%
CAACACGTCTTTCCCGAGTT+TGG - tig0024042:45409-45428 Msa1413620:intron 50.0%
CAGTCCTGTTGGCCATCTTA+GGG - tig0024042:45432-45451 Msa1413620:intron 50.0%
!!! GCCCCAAAAATTTTGAGGCC+CGG - tig0024042:45841-45860 Msa1413620:intron 50.0%
! TTCTTTTGTGTGGACAGGGC+TGG + tig0024042:45897-45916 None:intergenic 50.0%
CTGTGAAAAACAGGCAGCGT+GGG - tig0024042:46516-46535 Msa1413620:CDS 50.0%
TCAATGCGGACAGGTAGTTC+AGG + tig0024042:46628-46647 None:intergenic 50.0%
ACGTACCATCAAGGAGCGAA+GGG + tig0024042:46808-46827 None:intergenic 50.0%
TGGCATAGCCCAAGTGCATA+AGG + tig0024042:46992-47011 None:intergenic 50.0%
GCAGCAGCCTTTGTTGAGAA+AGG + tig0024042:47114-47133 None:intergenic 50.0%
! CAAAGGCTGCTGCATTTTGG+AGG - tig0024042:47121-47140 Msa1413620:intron 50.0%
CGCATTATGGGAAGCAAGGT+AGG + tig0024042:47279-47298 None:intergenic 50.0%
GCTACGCATTATGGGAAGCA+AGG + tig0024042:47283-47302 None:intergenic 50.0%
CACTGGACATGTGGAACCTT+TGG - tig0024042:47584-47603 Msa1413620:CDS 50.0%
TAATTTGGCCACCACCTGTC+AGG - tig0024042:48154-48173 Msa1413620:intron 50.0%
CTTCCTAAACTGCAGAGGAC+TGG - tig0024042:48334-48353 Msa1413620:intron 50.0%
TACGAGCTACAACAAGTGCG+TGG - tig0024042:48591-48610 Msa1413620:intron 50.0%
ACGAGCTACAACAAGTGCGT+GGG - tig0024042:48592-48611 Msa1413620:intron 50.0%
!! GGCAAGAAAGTTTGCTGCCT+TGG - tig0024042:49150-49169 Msa1413620:intron 50.0%
CTTCCAGCTGATCAATTGCC+AGG - tig0024042:49192-49211 Msa1413620:intron 50.0%
TCTCCTGGCAATTGATCAGC+TGG + tig0024042:49198-49217 None:intergenic 50.0%
AGCTGATCAATTGCCAGGAG+AGG - tig0024042:49197-49216 Msa1413620:intron 50.0%
CAATTGCCAGGAGAGGCTTT+AGG - tig0024042:49204-49223 Msa1413620:intron 50.0%
TGCAACCAGGAGATCAAGAG+TGG + tig0024042:49244-49263 None:intergenic 50.0%
CTTTGCAGAAGCTGCAGAAG+AGG - tig0024042:49429-49448 Msa1413620:CDS 50.0%
!! AGGATGACAGTGGTTCTGAC+AGG - tig0024042:49515-49534 Msa1413620:CDS 50.0%
!! GGATGACAGTGGTTCTGACA+GGG - tig0024042:49516-49535 Msa1413620:CDS 50.0%
!! CAGTGGTTCTGACAGGGAAA+TGG - tig0024042:49522-49541 Msa1413620:CDS 50.0%
GGGAACTGATGCTGAAGATG+GGG - tig0024042:49543-49562 Msa1413620:CDS 50.0%
GGGCAGGGAATCATACCTAA+TGG + tig0024042:50084-50103 None:intergenic 50.0%
TCTTCTCGTCTCAGCATGCT+GGG + tig0024042:50795-50814 None:intergenic 50.0%
! TTTGGCTCAGCGGTCAAAGT+TGG - tig0024042:50983-51002 Msa1413620:CDS 50.0%
! CAGCGGTCAAAGTTGGTCTA+TGG - tig0024042:50990-51009 Msa1413620:CDS 50.0%
CCTCAGCATACTAAACTCGC+AGG + tig0024042:51042-51061 None:intergenic 50.0%
CCTGCGAGTTTAGTATGCTG+AGG - tig0024042:51039-51058 Msa1413620:intron 50.0%
ACTGTGGAGTTTAGCGCTTC+TGG - tig0024042:51097-51116 Msa1413620:CDS 50.0%
GGCATGGAAACCTGAAAGGA+AGG + tig0024042:51193-51212 None:intergenic 50.0%
GGAAACCGTGAAACTTGGCA+TGG + tig0024042:51209-51228 None:intergenic 50.0%
TCGGACAGGATTCCATATGC+TGG + tig0024042:51230-51249 None:intergenic 50.0%
CATTGCTGCACTAATCGGAC+AGG + tig0024042:51244-51263 None:intergenic 50.0%
CTGTCCGATTAGTGCAGCAA+TGG - tig0024042:51242-51261 Msa1413620:CDS 50.0%
AAATTGGGGCTGCCAATGGT+TGG - tig0024042:51313-51332 Msa1413620:CDS 50.0%
AGCTAGCTGAGCTGAGGAAG+AGG - tig0024042:43359-43378 Msa1413620:three_prime_UTR 55.0%
GCTAGCTGAGCTGAGGAAGA+GGG - tig0024042:43360-43379 Msa1413620:three_prime_UTR 55.0%
CTAGCTGAGCTGAGGAAGAG+GGG - tig0024042:43361-43380 Msa1413620:three_prime_UTR 55.0%
GAATGGCGGCAACTTGTCTG+AGG + tig0024042:43622-43641 None:intergenic 55.0%
GGGACAGTGGTCGGGATAAT+CGG + tig0024042:43885-43904 None:intergenic 55.0%
AGAAGATGGGGACAGTGGTC+GGG + tig0024042:43893-43912 None:intergenic 55.0%
ATTGGAGAGGCCTGTTCCCT+TGG - tig0024042:44304-44323 Msa1413620:CDS 55.0%
GGTTGACCTTCCAAGGGAAC+AGG + tig0024042:44317-44336 None:intergenic 55.0%
AAATCCACGGAGGCAGTCCT+AGG + tig0024042:45106-45125 None:intergenic 55.0%
!! GTGAGTTGGTTCGAAAGCGC+AGG - tig0024042:45131-45150 Msa1413620:intron 55.0%
CCAACAGGACTGCCAAACTC+GGG + tig0024042:45424-45443 None:intergenic 55.0%
GCCAACAGGACTGCCAAACT+CGG + tig0024042:45425-45444 None:intergenic 55.0%
GCAGTCCTGTTGGCCATCTT+AGG - tig0024042:45431-45450 Msa1413620:intron 55.0%
TTGGCCCTAAGATGGCCAAC+AGG + tig0024042:45439-45458 None:intergenic 55.0%
TGTTGGCCATCTTAGGGCCA+AGG - tig0024042:45438-45457 Msa1413620:intron 55.0%
GCCATCTTAGGGCCAAGGTA+CGG - tig0024042:45443-45462 Msa1413620:intron 55.0%
ACCGTACCTTGGCCCTAAGA+TGG + tig0024042:45447-45466 None:intergenic 55.0%
TGTTAAGACGGCCCTGTGTG+TGG + tig0024042:45577-45596 None:intergenic 55.0%
AGGCGCGGAAGCTTGTGTTT+GGG + tig0024042:45731-45750 None:intergenic 55.0%
ACTTCAATGAGGCTCGCCCT+TGG + tig0024042:46321-46340 None:intergenic 55.0%
!! CCACGCTGCCTGTTTTTCAC+AGG + tig0024042:46518-46537 None:intergenic 55.0%
CCTGTGAAAAACAGGCAGCG+TGG - tig0024042:46515-46534 Msa1413620:CDS 55.0%
CTTCTCCCTTCGCTCCTTGA+TGG - tig0024042:46800-46819 Msa1413620:CDS 55.0%
CACGTACCATCAAGGAGCGA+AGG + tig0024042:46809-46828 None:intergenic 55.0%
CCACCAGTCCTCTGCAGTTT+AGG + tig0024042:48340-48359 None:intergenic 55.0%
CCTAAACTGCAGAGGACTGG+TGG - tig0024042:48337-48356 Msa1413620:intron 55.0%
TGAGATACGGCTCAACCCAG+TGG + tig0024042:48364-48383 None:intergenic 55.0%
!! ATCAGCTGGAAGTGCCAGCA+AGG + tig0024042:49184-49203 None:intergenic 55.0%
CAAGAGTGGCACGGAATACC+CGG + tig0024042:49230-49249 None:intergenic 55.0%
CCAGGAGATCAAGAGTGGCA+CGG + tig0024042:49239-49258 None:intergenic 55.0%
TGCAGAAGCTGCAGAAGAGG+AGG - tig0024042:49432-49451 Msa1413620:CDS 55.0%
GTCATTCAGGCCCGATGATG+AGG - tig0024042:50483-50502 Msa1413620:CDS 55.0%
CTCTTCTCGTCTCAGCATGC+TGG + tig0024042:50796-50815 None:intergenic 55.0%
CAGCATGCTGAGACGAGAAG+AGG - tig0024042:50794-50813 Msa1413620:CDS 55.0%
GGGTAAATTGGGGCTGCCAA+TGG - tig0024042:51309-51328 Msa1413620:CDS 55.0%
! GGGCTGCCAATGGTTGGTAT+AGG - tig0024042:51319-51338 Msa1413620:CDS 55.0%
! AACGCATTGCTGATGGGCAC+TGG + tig0024042:51432-51451 None:intergenic 55.0%
GAGTGCGAGTGCGAGTGCAA+TGG + tig0024042:43790-43809 None:intergenic 60.0%
GAGAGGCCTGTTCCCTTGGA+AGG - tig0024042:44308-44327 Msa1413620:CDS 60.0%
TAGTCCTAGGACTGCCTCCG+TGG - tig0024042:45099-45118 Msa1413620:intron 60.0%
CCCGAGTTTGGCAGTCCTGT+TGG - tig0024042:45421-45440 Msa1413620:intron 60.0%
GAGGCGCGGAAGCTTGTGTT+TGG + tig0024042:45732-45751 None:intergenic 60.0%
TCGAGGCTGGGCTATGTCAC+CGG + tig0024042:45863-45882 None:intergenic 60.0%
GTGACATAGCCCAGCCTCGA+CGG - tig0024042:45863-45882 Msa1413620:CDS 60.0%
TGACATAGCCCAGCCTCGAC+GGG - tig0024042:45864-45883 Msa1413620:CDS 60.0%
! AAACAGGCAGCGTGGGTTGC+AGG - tig0024042:46523-46542 Msa1413620:CDS 60.0%
ACTCCAGTCCTGACAGGTGG+TGG + tig0024042:48165-48184 None:intergenic 60.0%
ACCACCTGTCAGGACTGGAG+TGG - tig0024042:48164-48183 Msa1413620:CDS 60.0%
CCACCTGTCAGGACTGGAGT+GGG - tig0024042:48165-48184 Msa1413620:CDS 60.0%
GATCCCACTCCAGTCCTGAC+AGG + tig0024042:48171-48190 None:intergenic 60.0%
GTCAGGACTGGAGTGGGATC+TGG - tig0024042:48171-48190 Msa1413620:CDS 60.0%
! CAGAGGACTGGTGGACCACT+GGG - tig0024042:48346-48365 Msa1413620:intron 60.0%
!! TGCCAGGAGAGGCTTTAGGC+CGG - tig0024042:49208-49227 Msa1413620:intron 60.0%
! CCGTGCCACTCTTGATCTCC+TGG - tig0024042:49236-49255 Msa1413620:intron 60.0%
CGAGGCTGGGCTATGTCACC+GGG + tig0024042:45862-45881 None:intergenic 65.0%
TGGCCACCACCTGTCAGGAC+TGG - tig0024042:48159-48178 Msa1413620:intron 65.0%
CCCACTCCAGTCCTGACAGG+TGG + tig0024042:48168-48187 None:intergenic 65.0%
! GCAGAGGACTGGTGGACCAC+TGG - tig0024042:48345-48364 Msa1413620:intron 65.0%
!! GCCAGGAGAGGCTTTAGGCC+GGG - tig0024042:49209-49228 Msa1413620:intron 65.0%
ACCCGGCCTAAAGCCTCTCC+TGG + tig0024042:49213-49232 None:intergenic 65.0%
!! AGCCCAGCCTCGACGGGCTA+TGG - tig0024042:45870-45889 Msa1413620:CDS 70.0%
!! GCCCAGCCTCGACGGGCTAT+GGG - tig0024042:45871-45890 Msa1413620:CDS 70.0%
GCCCATAGCCCGTCGAGGCT+GGG + tig0024042:45875-45894 None:intergenic 70.0%
GGCCCATAGCCCGTCGAGGC+TGG + tig0024042:45876-45895 None:intergenic 75.0%
! GGCTGGCCCATAGCCCGTCG+AGG + tig0024042:45880-45899 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0024042 gene 43291 51564 43291 ID=Msa1413620;Name=Msa1413620
tig0024042 mRNA 43291 51564 43291 ID=Msa1413620-mRNA-1;Parent=Msa1413620;Name=Msa1413620-mRNA-1;_AED=0.12;_eAED=0.12;_QI=167|0.94|0.95|1|0.89|0.85|20|599|1032
tig0024042 exon 43291 43879 43291 ID=Msa1413620-mRNA-1:exon:21340;Parent=Msa1413620-mRNA-1
tig0024042 exon 43977 44147 43977 ID=Msa1413620-mRNA-1:exon:21339;Parent=Msa1413620-mRNA-1
tig0024042 exon 44260 44377 44260 ID=Msa1413620-mRNA-1:exon:21338;Parent=Msa1413620-mRNA-1
tig0024042 exon 45249 45418 45249 ID=Msa1413620-mRNA-1:exon:21337;Parent=Msa1413620-mRNA-1
tig0024042 exon 45573 45712 45573 ID=Msa1413620-mRNA-1:exon:21336;Parent=Msa1413620-mRNA-1
tig0024042 exon 45854 45993 45854 ID=Msa1413620-mRNA-1:exon:21335;Parent=Msa1413620-mRNA-1
tig0024042 exon 46407 46586 46407 ID=Msa1413620-mRNA-1:exon:21334;Parent=Msa1413620-mRNA-1
tig0024042 exon 46728 46831 46728 ID=Msa1413620-mRNA-1:exon:21333;Parent=Msa1413620-mRNA-1
tig0024042 exon 47200 47331 47200 ID=Msa1413620-mRNA-1:exon:21332;Parent=Msa1413620-mRNA-1
tig0024042 exon 47531 47729 47531 ID=Msa1413620-mRNA-1:exon:21331;Parent=Msa1413620-mRNA-1
tig0024042 exon 47837 47955 47837 ID=Msa1413620-mRNA-1:exon:21330;Parent=Msa1413620-mRNA-1
tig0024042 exon 48034 48075 48034 ID=Msa1413620-mRNA-1:exon:21329;Parent=Msa1413620-mRNA-1
tig0024042 exon 48164 48326 48164 ID=Msa1413620-mRNA-1:exon:21328;Parent=Msa1413620-mRNA-1
tig0024042 exon 49396 49576 49396 ID=Msa1413620-mRNA-1:exon:21327;Parent=Msa1413620-mRNA-1
tig0024042 exon 49652 49775 49652 ID=Msa1413620-mRNA-1:exon:21326;Parent=Msa1413620-mRNA-1
tig0024042 exon 49864 50009 49864 ID=Msa1413620-mRNA-1:exon:21325;Parent=Msa1413620-mRNA-1
tig0024042 exon 50182 50355 50182 ID=Msa1413620-mRNA-1:exon:21324;Parent=Msa1413620-mRNA-1
tig0024042 exon 50435 50619 50435 ID=Msa1413620-mRNA-1:exon:21323;Parent=Msa1413620-mRNA-1
tig0024042 exon 50696 51011 50696 ID=Msa1413620-mRNA-1:exon:21322;Parent=Msa1413620-mRNA-1
tig0024042 exon 51093 51564 51093 ID=Msa1413620-mRNA-1:exon:21321;Parent=Msa1413620-mRNA-1
tig0024042 five_prime_UTR 51398 51564 51398 ID=Msa1413620-mRNA-1:five_prime_utr;Parent=Msa1413620-mRNA-1
tig0024042 CDS 51093 51397 51093 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 50696 51011 50696 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 50435 50619 50435 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 50182 50355 50182 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 49864 50009 49864 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 49652 49775 49652 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 49396 49576 49396 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 48164 48326 48164 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 48034 48075 48034 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 47837 47955 47837 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 47531 47729 47531 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 47200 47331 47200 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 46728 46831 46728 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 46407 46586 46407 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 45854 45993 45854 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 45573 45712 45573 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 45249 45418 45249 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 44260 44377 44260 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 CDS 43987 44147 43987 ID=Msa1413620-mRNA-1:cds;Parent=Msa1413620-mRNA-1
tig0024042 three_prime_UTR 43977 43986 43977 ID=Msa1413620-mRNA-1:three_prime_utr;Parent=Msa1413620-mRNA-1
tig0024042 three_prime_UTR 43291 43879 43291 ID=Msa1413620-mRNA-1:three_prime_utr;Parent=Msa1413620-mRNA-1
Gene Sequence

>Msa1413620

ATGGATGAAGTAGTTGTTATACTTGAAGGAACTCTGAGTCCGAATCCGAATGAAAGAAAGGCTGCTGAACAAAGGTTGGATGAGATCCAATATGCACCCAATCATCTTCCAACTCTTTTACAAATCATCGTTCAATCAGACGATTCTGTCTCTGATATTTCCCTCAGACAAGTTGCCGCCATTCATTTCAAAAACTTCATTGCTAAGAATTGGTCTTCCACTGCTCACTCAATCTCTTTCGCCGATAAAGACTTTGTTAGGAATCACATTCTCCTCTTTTTACCTCAACTTCCTTCTCTTTTGAGGGTTCAACTTGGTGAGTGCCTCAAAACTATTCTTCATTCCGATTATCCCGACCACTGTCCCCATCTTCTTGATTGGATCAAACATAATTTACACGATCAACAACATCTCTTTTCTGCCTTATTCGTTCTCCGCATTCTTTCTATTAAATATGAATTCAAATCAGACGAAGATAGGACTCCTGCCTATCACATTATTCACGAGACATTTCCCCACCTTCTCAATATATTTAACACACTTCTCCAGATTCCTGATCCATCCATTCAAGTAGCTGATCTCATCAAGCTTATCTGTAAAATATTCTGGTCCTCTATATATTTGGAGATTCCAAAGCTTTTGTTTGATCAAAATGTATTCAGTGCTTGGATGGTGCTGTTTTTAAATGTATTGGAGAGGCCTGTTCCCTTGGAAGGTCAACCTGTTGATCCTGATCTTCGCAAATCATGGGGTTGGTGGAAACTCAAAAAATGGACAATTCACATTCTAAACAGACTCTACACTCGTTTTGGTGACTTGAAGCTGCGAAACCCTGAAAACAAGGCATTTGCTCAAATGTTTCACAAGCATTATGCGGGGAAGATTTTGGACTGCCACTTAAATCTGTTGAATGTCATTCGAGCAGGTGGTTACTTACCTGACAGAGTTATCAACCTACTTCTTCAATATCTAACCAACAGTATTTCAAAGAATAGCATGTATACTGTGCTGCAGCCTCGGCTTGACGTTCTTCTTTTTGAAATAGTTTTCCCTCTCATGTGCTTCAATGATAATGATCAAAAGCTTTGGGACGAAGATCCACATGAGTATGTTAGGAAAGGCTATGACATTATTGAAGACTTGTATAGTCCTAGGACTGCCTCCGTGGATTTTATGAGTGAGTTGGTTCGAAAGCGCAGGGAAGATAATTTTCACAAGTTTATTCAATTCATTGTTGAAATTTTGAAAAGGTATGATGAAGCACCAGTAGAATACAGGTCTTATAGGCAGAAAGATGGAGCTCTTCTTGCTATTGGGACACTTTGTGACAAATTGAAACAAACTGAGCCCTATAAATCTGAACTTGAGCGTATGTTAGTGCAACACGTCTTTCCCGAGTTTGGCAGTCCTGTTGGCCATCTTAGGGCCAAGGCAGCGTGGGTTGCAGGACAATATGCCCACATTAGCTTCTCAGATCAGAACAATTTCCGGAAGGCATTGCAATGTGTTGTCTGTGGAATGCGAGATCCTGAACTACCTGTCCGCATTGATTCTGTTTTTGCTTTGCGTTCTTTTATTGAAGCTTGCAAAGGTGATTTAGATGAAATTCGTTCTCTTCTCCCTTCGCTCCTTGATGAGTTCTTCAAACTTATGAATGAGGTTGAGAATGAAGACCTTGTGTTTACTTTGGAGACTATTGTGGACAAGTTTGGTGAAGAAATGGCACCTTATGCACTTGGGCTATGCCAAAATTTGGCTGCTGCATTTTGGAGGTGTATGAACACTGCTGATGCTGATGATGACGCTGATGATTCAAGTTCAATGGCTGCAGTTGGTTGCTTGCGTGCTATTAGCACAATACTTGAATCAGTGAGCAGTCTTCCTCAACTTTTTGTTCAAATCGAGCCTACCTTGCTTCCCATAATGCGTAGCATGTTAACAACCGATGGTCAAGAGGTTTTTGAAGAAATTTTGGAGATCGTATCATATATGACTTTTTTCTCTCCAACAATATCACTGGACATGTGGAACCTTTGGCCATTGATGATGGAAGCACTATCAGATTGGGCTATTGATTTCTTTTCAAATATTATGGTTCCTTTGGACAATTATATTTCAAGGGGAACTTCCCATTTCATTACATGCAAAGAACCTGACTATCAACAGTGTTTGTGGAATATGATTTCCTCTATTATGTCAGATAAAAATATGGAGGACAGTGATATTGAGTCAGCTCCAAAGCTGATTGAAATTGTCTTCCTAAACTGCAGAGGACTGGTGGACCACTGGGTTGAGCCGTATCTCAGAATTACAATTGAACGTTTGCATAGAACTGGAAAATCATATTTGAAATGTCTTCTCATTCAAGTGATTTCAGATGGTCTGTACTACAACGCCACATTGACTCTTAGCATATTGCAAAAGTTAGGTGTTGCATCAGAAATCTTCAATCTTTGGTTCCAAATGCTGCAAGAAGTCAAGAAGAGTGGTGTGCGTGCTAATTTTAAAAGGGAACATGGCAAGAAAGTTTGCTGCCTTGGTTTAACATCCTTGCTGGCACTTCCAGCTGATCAATTGCCAGGAGAGGCTTTAGGCCGGGTATTCCGTGCCACTCTTGATCTCCTGGTTGCATACAAGGATCAAGTTGCAGAAGCTGCAGAAGAGGAGGAAGAAGAAGAAGAAAATGACGACGATGATATGGACGGCTTTCAAACTGATGATGAAGATGAGGATGACAGTGGTTCTGACAGGGAAATGGGAACTGATGCTGAAGATGGGGATGAAGCTGACAGTAGTAAACTTAGAAAATTGACTGATCAGGAAACGTCATTCAGGCCCGATGATGAGGACTCAGATGACGACTTCAGTGATGACGAAGAGTTACAGTCCCCAATTGATGAAGTGGATCCTTTTATTTTTTTTGTGGATACAATGAAAGTGATGCAATCATCAGATCCAATGAGGTTTCAAAACCTGACCCAAACACTTGAGTTCTCTTATCAAGCTCTTGCAAATGGTGTTGCCCAGCATGCTGAGACGAGAAGAGGTGAGATTGAGAAGGAAAAGTCGGAGAAGTCAGCAGCTACCACAGATTCTTAA
Protein sequence

>Msa1413620

MDEVVVILEGTLSPNPNERKAAEQRLDEIQYAPNHLPTLLQIIVQSDDSVSDISLRQVAAIHFKNFIAKNWSSTAHSISFADKDFVRNHILLFLPQLPSLLRVQLGECLKTILHSDYPDHCPHLLDWIKHNLHDQQHLFSALFVLRILSIKYEFKSDEDRTPAYHIIHETFPHLLNIFNTLLQIPDPSIQVADLIKLICKIFWSSIYLEIPKLLFDQNVFSAWMVLFLNVLERPVPLEGQPVDPDLRKSWGWWKLKKWTIHILNRLYTRFGDLKLRNPENKAFAQMFHKHYAGKILDCHLNLLNVIRAGGYLPDRVINLLLQYLTNSISKNSMYTVLQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASVDFMSELVRKRREDNFHKFIQFIVEILKRYDEAPVEYRSYRQKDGALLAIGTLCDKLKQTEPYKSELERMLVQHVFPEFGSPVGHLRAKAAWVAGQYAHISFSDQNNFRKALQCVVCGMRDPELPVRIDSVFALRSFIEACKGDLDEIRSLLPSLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCMNTADADDDADDSSSMAAVGCLRAISTILESVSSLPQLFVQIEPTLLPIMRSMLTTDGQEVFEEILEIVSYMTFFSPTISLDMWNLWPLMMEALSDWAIDFFSNIMVPLDNYISRGTSHFITCKEPDYQQCLWNMISSIMSDKNMEDSDIESAPKLIEIVFLNCRGLVDHWVEPYLRITIERLHRTGKSYLKCLLIQVISDGLYYNATLTLSILQKLGVASEIFNLWFQMLQEVKKSGVRANFKREHGKKVCCLGLTSLLALPADQLPGEALGRVFRATLDLLVAYKDQVAEAAEEEEEEEENDDDDMDGFQTDDEDEDDSGSDREMGTDAEDGDEADSSKLRKLTDQETSFRPDDEDSDDDFSDDEELQSPIDEVDPFIFFVDTMKVMQSSDPMRFQNLTQTLEFSYQALANGVAQHAETRRGEIEKEKSEKSAATTDS*