AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1031790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1031790 MtrunA17_Chr7g0253431 99.642 1118 4 0 1 1118 1 1118 0.0 2290
Msa1031790 MtrunA17_Chr8g0378791 79.784 1113 220 3 7 1118 9 1117 0.0 1761
Msa1031790 MtrunA17_Chr2g0277681 25.819 1069 698 25 19 1065 2 997 3.99e-88 307
Msa1031790 MtrunA17_Chr3g0110011 45.532 235 126 1 884 1118 110 342 3.57e-66 227
Msa1031790 MtrunA17_Chr3g0110081 25.123 816 516 21 38 835 103 841 1.85e-40 162
Msa1031790 MtrunA17_Chr3g0110041 26.273 609 397 22 19 590 77 670 3.50e-35 144
Msa1031790 MtrunA17_Chr3g0110021 28.392 398 256 12 37 416 48 434 3.69e-35 140
Msa1031790 MtrunA17_Chr3g0110051 25.340 588 396 17 25 589 64 631 2.62e-32 135
Msa1031790 MtrunA17_Chr3g0110061 25.880 568 393 15 43 594 55 610 8.93e-28 120
Msa1031790 MtrunA17_Chr8g0388701 35.583 163 85 4 926 1087 18 161 4.51e-22 94.7
Msa1031790 MtrunA17_Chr3g0110071 42.683 82 42 2 945 1026 30 106 4.68e-12 63.9
Msa1031790 MtrunA17_Chr8g0388661 21.951 656 425 27 37 635 20 645 6.31e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1031790 AT5G19820.1 74.373 1116 280 4 4 1118 6 1116 0.0 1713
Msa1031790 AT4G27640.1 24.748 1091 745 22 22 1095 5 1036 1.75e-82 291

Find 321 sgRNAs with CRISPR-Local

Find 723 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGCTCTTTCATGCTTTC+TGG -0.040025 7_1:-66518202 None:intergenic
GTGGACATGGTGCGTGTTTC+GGG 0.106441 7_1:-66511706 None:intergenic
TGTAAAGCTTCCACCAAATT+TGG 0.127943 7_1:-66517152 None:intergenic
TCTTCTCAGGCAGCTGTTTA+TGG 0.130988 7_1:+66519493 Msa1031790:intron
TGATTATATAATTCCAAATT+TGG 0.146239 7_1:+66517139 Msa1031790:CDS
CTTCATGGAAGTAAAATTTA+AGG 0.147973 7_1:-66516909 None:intergenic
CTCTCTGCTGCTCGAAAATA+AGG 0.154964 7_1:-66511375 None:intergenic
GTGAGAGAGTTTGAGGATTA+AGG 0.166281 7_1:-66511662 None:intergenic
CTTGATTGCTGAACCATATT+TGG 0.181989 7_1:+66521463 Msa1031790:three_prime_UTR
CATTTGTAATATTAGGTTTC+AGG 0.184402 7_1:+66513180 Msa1031790:intron
AAATAAGGTACTAAAATATC+TGG 0.209428 7_1:-66514934 None:intergenic
TTATGTTGCTACAGATATTA+TGG 0.209828 7_1:+66519317 Msa1031790:intron
TCCTATCATCCTAATTGTTT+TGG 0.223074 7_1:+66521288 Msa1031790:exon
TCCGCAAATGGCTTGGGTTT+TGG 0.226554 7_1:-66521843 None:intergenic
GGTGGACATGGTGCGTGTTT+CGG 0.228644 7_1:-66511707 None:intergenic
TGAATTGCTGCCAACTTATT+TGG 0.239895 7_1:+66513660 Msa1031790:CDS
GGGCAATTGTCCACAGATTT+GGG 0.246478 7_1:+66514093 Msa1031790:CDS
ATGGTGCGTGTTTCGGGGTT+AGG 0.249043 7_1:-66511700 None:intergenic
TGGGCAATTGTCCACAGATT+TGG 0.253832 7_1:+66514092 Msa1031790:CDS
TCTCTGATGACCTCGCTTCT+TGG 0.257887 7_1:+66511908 Msa1031790:CDS
ATTTAAGTGTTATAGTTAAA+AGG 0.258349 7_1:+66521589 Msa1031790:three_prime_UTR
GATACTTGGATTACCAAATA+TGG 0.266294 7_1:-66521476 None:intergenic
TGAATAGGATAAGAAAGTTT+AGG 0.267907 7_1:+66511313 None:intergenic
GCGCAATTGGCGCATTATAT+TGG 0.268215 7_1:+66512009 Msa1031790:CDS
GGACATGAGGTTTGTGATTA+GGG 0.272045 7_1:-66511572 None:intergenic
AGCATCAAAGTCCTCTTCTT+TGG 0.274091 7_1:-66518229 None:intergenic
TTGACTGAGGCATTGAATTC+TGG 0.283347 7_1:+66513229 Msa1031790:CDS
GCAGGTGATGACAAAGAATT+TGG 0.302259 7_1:+66513993 Msa1031790:intron
CTGCCTTCCTAACTTCTTCA+TGG 0.303161 7_1:-66516924 None:intergenic
CTAAGTTGCTTGCCTATAAA+AGG 0.312335 7_1:+66520782 Msa1031790:CDS
CTCACAATCCCATCCAAATA+AGG 0.313213 7_1:-66514949 None:intergenic
CTTCTCAGGCAGCTGTTTAT+GGG 0.313525 7_1:+66519494 Msa1031790:intron
GTTAGGAAGGCAGCAGCTTC+AGG 0.319059 7_1:+66516934 Msa1031790:CDS
GCACAAATGGCTCTAATTCT+AGG 0.322349 7_1:+66511526 Msa1031790:CDS
TTTACTTCCATGAAGAAGTT+AGG 0.325716 7_1:+66516917 Msa1031790:CDS
TGGAAAGATATTGATTGTTA+TGG 0.326132 7_1:-66520985 None:intergenic
TGCTAGATTGGCGATTGCTT+GGG 0.326637 7_1:+66518401 Msa1031790:intron
GAGTTTGAGGATTAAGGAAT+CGG 0.328747 7_1:-66511656 None:intergenic
GAGGCGAGAGAGCGTGCTCC+TGG 0.331616 7_1:+66513430 Msa1031790:CDS
TGGTGCGTGTTTCGGGGTTA+GGG 0.332020 7_1:-66511699 None:intergenic
GGTTATTTATCTCAGGTATC+AGG 0.333202 7_1:+66518108 Msa1031790:intron
AGATCAGATAAAGAACTTAT+AGG 0.333704 7_1:+66520962 Msa1031790:intron
GCCCACCGCACCCGAGGGTT+TGG 0.335815 7_1:-66514054 None:intergenic
AGATAGACTTTCAATTGCTT+TGG 0.339365 7_1:+66513609 Msa1031790:CDS
CCTGTCACGGTCGGATGAAT+TGG 0.340721 7_1:-66512160 None:intergenic
TTGGGAACGTTGGTCGTTGA+TGG 0.340981 7_1:-66511596 None:intergenic
GAATAGGATAAGAAAGTTTA+GGG 0.345308 7_1:+66511314 None:intergenic
TTCCAATGATGCTAGGCTTC+AGG 0.345498 7_1:+66511966 Msa1031790:CDS
GTGTGGCATGGATTTGTTGC+AGG 0.345726 7_1:+66521512 Msa1031790:three_prime_UTR
CAAACTTCTTGTACTCCTTC+AGG 0.347009 7_1:+66514972 Msa1031790:CDS
CAGGCAGCTGTTTATGGGGT+TGG 0.353036 7_1:+66519499 Msa1031790:intron
CGCAAGAATCCAAAACAATT+AGG 0.355006 7_1:-66521297 None:intergenic
CGGAGAGTGGATTGAGTTGA+AGG 0.356862 7_1:-66511793 None:intergenic
AGATTTGGGGCCAGACTTGC+AGG 0.357142 7_1:+66514107 Msa1031790:CDS
GATAGACTTTCAATTGCTTT+GGG 0.359150 7_1:+66513610 Msa1031790:CDS
CAAGTCAAGCAGTTGATACT+TGG 0.360837 7_1:-66521490 None:intergenic
CTCCTGAAGCCTAGCATCAT+TGG 0.367008 7_1:-66511968 None:intergenic
GAACTTCTCATTGAGCTTGC+TGG 0.367665 7_1:+66513280 Msa1031790:CDS
AACTTCTCATTGAGCTTGCT+GGG 0.371868 7_1:+66513281 Msa1031790:CDS
GATAATGCTGTTTCAGCTCT+TGG 0.372944 7_1:+66519838 Msa1031790:CDS
GTTGGTGTCTGTGCCGAGTT+TGG 0.373481 7_1:+66519517 Msa1031790:CDS
GTTGCTTGTGTTCGCGCAAT+TGG 0.377292 7_1:+66511996 Msa1031790:CDS
TGGATTTGATTGGTTCTTGA+TGG 0.378559 7_1:-66511837 None:intergenic
TTCATGCTTTCTGGATGAAC+TGG 0.379901 7_1:-66518193 None:intergenic
TTTGCTGAAGACAACAGTTC+TGG 0.380717 7_1:-66517056 None:intergenic
CGGGGTTAGGGGAAGTGTGG+AGG 0.380917 7_1:-66511687 None:intergenic
CGATCAAAACCAGGCACAAA+TGG 0.382121 7_1:+66511513 Msa1031790:CDS
TTATGCTATCACGGTGGAAC+TGG 0.382701 7_1:-66519870 None:intergenic
GGAGGAGGTGAGAGAGTTTG+AGG 0.383052 7_1:-66511669 None:intergenic
TGGACATGAGGTTTGTGATT+AGG 0.384621 7_1:-66511573 None:intergenic
TGAAATATCCGCAAATGGCT+TGG 0.390405 7_1:-66521850 None:intergenic
TGGGCGGCTATAAATGCAAT+TGG 0.394396 7_1:+66514072 Msa1031790:CDS
ATATCACCACTTAGTGCTTC+CGG 0.396365 7_1:+66514134 Msa1031790:CDS
CTGTTGGAAAAGAGAAGTTC+AGG 0.396414 7_1:+66515740 Msa1031790:CDS
ATTATGTGCGGGGACTGATT+TGG 0.397041 7_1:+66521139 Msa1031790:CDS
TGATATTTATCCTGCAAGTC+TGG 0.398002 7_1:-66514117 None:intergenic
GAAGCTATGCGACACCGTTT+CGG 0.399962 7_1:+66511867 Msa1031790:CDS
AGCAATGGAGTGTATTAGTT+TGG 0.400859 7_1:+66515708 Msa1031790:CDS
TCCAAAACAATTAGGATGAT+AGG 0.406142 7_1:-66521289 None:intergenic
GTCACTGCAACAATCTCAAC+TGG 0.407046 7_1:+66515950 Msa1031790:CDS
GAGTAGACAATTGAGGAAGT+AGG 0.408750 7_1:-66512038 None:intergenic
ACTGTTGTCTTCAGCAAAAT+CGG 0.411583 7_1:+66517061 Msa1031790:CDS
GCATGACCTTCTTTGTTCAA+TGG 0.413646 7_1:+66520829 Msa1031790:CDS
AGTAGACAATTGAGGAAGTA+GGG 0.415176 7_1:-66512037 None:intergenic
GTGTATTAGTTTGGTAGGTA+TGG 0.417445 7_1:+66515717 Msa1031790:CDS
GTTAGATTGAGAAATGGTTT+TGG 0.421206 7_1:+66521548 Msa1031790:three_prime_UTR
GAAATATCCGCAAATGGCTT+GGG 0.422075 7_1:-66521849 None:intergenic
CTAGGCTTTGCAAGTGCCTC+GGG 0.424997 7_1:+66516139 Msa1031790:CDS
GAGACTAGTAACTACGGATT+TGG 0.426002 7_1:+66513574 Msa1031790:CDS
CGCACCCGAGGGTTTGGATC+AGG 0.426653 7_1:-66514048 None:intergenic
GGTTGCAGGTTGTTCCAGCC+TGG 0.427510 7_1:+66520759 Msa1031790:intron
GGTTAGGGGAAGTGTGGAGG+AGG 0.428933 7_1:-66511684 None:intergenic
GAAATTTGTGCAAGCATGTT+GGG 0.429694 7_1:+66517274 Msa1031790:CDS
TTTGGAGCATGTATTATCAA+TGG 0.431536 7_1:+66514011 Msa1031790:CDS
TATGTTATCAGGCGTGGGCT+AGG 0.433961 7_1:+66516121 Msa1031790:intron
TTAGTGCTTCCGGCATTAGC+TGG 0.434177 7_1:+66514144 Msa1031790:CDS
GCTAGGCTTTGCAAGTGCCT+CGG 0.435027 7_1:+66516138 Msa1031790:CDS
TTCTTAACGATGGATTTGAT+TGG 0.437781 7_1:-66511847 None:intergenic
ATCCAAACCCTCGGGTGCGG+TGG 0.438594 7_1:+66514052 Msa1031790:CDS
TAGTGCTGCTACTTCCTCTT+CGG 0.440238 7_1:+66512086 Msa1031790:CDS
GTTCAGGGACGATGCCAAAC+AGG 0.443445 7_1:+66515756 Msa1031790:CDS
AAAAGAAGCGGAAGCAAGTC+AGG 0.444656 7_1:-66511931 None:intergenic
ACTAATACACTCCATTGCTT+TGG 0.446076 7_1:-66515704 None:intergenic
CTCACCGCAGCATGCCAAGC+AGG 0.448315 7_1:-66513532 None:intergenic
AGAAGAAGGGACTCGCCATT+TGG 0.448470 7_1:+66513381 Msa1031790:CDS
GGCATGACAAAACCCATGTA+TGG 0.449433 7_1:-66516174 None:intergenic
CTTATTTGGCTGCCCCTGAA+TGG 0.450857 7_1:+66513674 Msa1031790:CDS
TGTAAAGAAGCTGCTGTGTC+TGG 0.451502 7_1:+66521375 Msa1031790:three_prime_UTR
AGTTTGAGGATTAAGGAATC+GGG 0.451683 7_1:-66511655 None:intergenic
TGTGCTAATGAATTTGTTGT+TGG 0.452880 7_1:+66513495 Msa1031790:CDS
TATAGGCAAGCAACTTAGCC+AGG 0.454237 7_1:-66520777 None:intergenic
GAGAAGAAGAGAACGGAGAG+TGG 0.454619 7_1:-66511806 None:intergenic
CTTGCACAAATTTCTACCTC+TGG 0.455019 7_1:-66517265 None:intergenic
GTGCTAGATTGGCGATTGCT+TGG 0.457692 7_1:+66518400 Msa1031790:intron
ATCTAGATGAAAAGCAAGTA+AGG 0.458320 7_1:+66518136 Msa1031790:CDS
CCAATTCATCCGACCGTGAC+AGG 0.458336 7_1:+66512160 Msa1031790:CDS
CAGTTTGTAAAGAAGTTGTT+TGG 0.458846 7_1:+66513472 Msa1031790:CDS
GAATTTGTTGTTGGATATTG+AGG 0.461520 7_1:+66513504 Msa1031790:CDS
CACAGCAGCTTCTTTACAAA+GGG 0.462528 7_1:-66521370 None:intergenic
TCCAAAACCCAAGCCATTTG+CGG 0.463461 7_1:+66521842 Msa1031790:three_prime_UTR
CAGGCTTAAGTTGTGCAGAC+TGG 0.467586 7_1:-66516206 None:intergenic
AATAAGGTACTAAAATATCT+GGG 0.467659 7_1:-66514933 None:intergenic
TTTCAACCATTGAACAAAGA+AGG 0.467766 7_1:-66520835 None:intergenic
ATTATCAGAATGCTGTGCAT+TGG 0.469285 7_1:-66519803 None:intergenic
TGGATTGAGTTGAAGGGGAG+AGG 0.469956 7_1:-66511786 None:intergenic
GGCAAGCAACTTAGCCAGGC+TGG 0.471152 7_1:-66520773 None:intergenic
GACTTTCAATTGCTTTGGGC+GGG 0.473563 7_1:+66513614 Msa1031790:CDS
TTGCAAGCTTCAAGCAAGAA+TGG 0.473957 7_1:-66519350 None:intergenic
GGCAGCAATTCAGACGCAAC+TGG 0.474296 7_1:-66513649 None:intergenic
GCAGGACTTCCTCCCATACA+TGG 0.476423 7_1:+66516161 Msa1031790:CDS
TGGAAAGCAGATGGTTCAAG+AGG 0.476999 7_1:+66515430 Msa1031790:CDS
CTTCTACCCTTGCTTCAACC+TGG 0.477777 7_1:+66521225 Msa1031790:CDS
CTTCTACAGAGGCACTTTCA+AGG 0.478037 7_1:+66519758 Msa1031790:intron
AAGACGCGTGTCTGTTGTCA+TGG 0.480809 7_1:+66521334 Msa1031790:three_prime_UTR
ACTCTCGGGGATAAAAGAAT+AGG 0.482856 7_1:+66516683 Msa1031790:CDS
AATGTCATCAAATATACAAA+TGG 0.487724 7_1:-66519144 None:intergenic
CTTACTTATGAGCTGCTTCG+CGG 0.490569 7_1:-66519178 None:intergenic
GACGAAAGCTCTTCAAAGAA+AGG 0.491643 7_1:-66518458 None:intergenic
CAGGTTGAAGCAAGGGTAGA+AGG 0.492470 7_1:-66521224 None:intergenic
GAATTAGAGCCATTTGTGCC+TGG 0.493360 7_1:-66511522 None:intergenic
GATTCGAAGTGGGTTGAATC+CGG 0.493509 7_1:-66511550 None:intergenic
GGTGCGTGTTTCGGGGTTAG+GGG 0.494918 7_1:-66511698 None:intergenic
TTATCAGAATGCTGTGCATT+GGG 0.497165 7_1:-66519802 None:intergenic
AGAAATTTGTGCAAGCATGT+TGG 0.498176 7_1:+66517273 Msa1031790:CDS
CATATAGGTTGCTTCCACAT+TGG 0.499173 7_1:+66516879 Msa1031790:intron
AGGTGATTTAATCGAGGCTA+AGG 0.501348 7_1:+66520802 Msa1031790:CDS
AGGCAAATTGTTGACATTGT+TGG 0.502918 7_1:+66513325 Msa1031790:CDS
GACCAGTGTCTTGGAGGAGA+AGG 0.504137 7_1:+66516712 Msa1031790:CDS
TTGCTACGCTGATGAGTTGA+AGG 0.504595 7_1:+66516757 Msa1031790:CDS
GAGGATTAAGGAATCGGGAT+AGG 0.504738 7_1:-66511650 None:intergenic
AGGCATTAAGACCAGTGTCT+TGG 0.504923 7_1:+66516703 Msa1031790:CDS
CGCACTGAATGAATGCATAC+AGG 0.505412 7_1:+66517297 Msa1031790:CDS
TGTGATTAGGGATTCGAAGT+GGG 0.507731 7_1:-66511560 None:intergenic
TGTTGCAGGGAGGTGTTGGT+TGG 0.509858 7_1:+66521526 Msa1031790:three_prime_UTR
GATTTGTTGCAGGGAGGTGT+TGG 0.515676 7_1:+66521522 Msa1031790:three_prime_UTR
AGCATTGAAACCATTACTCT+CGG 0.515898 7_1:+66516668 Msa1031790:intron
CATTAAGACCAGTGTCTTGG+AGG 0.520829 7_1:+66516706 Msa1031790:CDS
AAACCCTCGGGTGCGGTGGG+CGG 0.521210 7_1:+66514056 Msa1031790:CDS
AGCAAAATCGGCTATAGAGA+AGG 0.523446 7_1:+66517073 Msa1031790:CDS
CAACAAACTCAATAGCCAAA+TGG 0.523533 7_1:-66513396 None:intergenic
GGAGAGTGGATTGAGTTGAA+GGG 0.524186 7_1:-66511792 None:intergenic
ATGGAGTGTATTAGTTTGGT+AGG 0.525634 7_1:+66515712 Msa1031790:CDS
AATTGCAGAGGGTTGTTCAA+AGG 0.526620 7_1:+66513732 Msa1031790:CDS
TCCAAACCCTCGGGTGCGGT+GGG 0.527222 7_1:+66514053 Msa1031790:CDS
CAGTCAATGTCTGCATCATG+AGG 0.527836 7_1:-66513213 None:intergenic
TTCTTTGTTCAATGGTTGAA+AGG 0.529928 7_1:+66520837 Msa1031790:CDS
TTCTCAGGCAGCTGTTTATG+GGG 0.531178 7_1:+66519495 Msa1031790:intron
TGGTTGGTTAGATTGAGAAA+TGG 0.532030 7_1:+66521542 Msa1031790:three_prime_UTR
GCATTGAAACCATTACTCTC+GGG 0.533758 7_1:+66516669 Msa1031790:intron
GGGTTACTTCCAATGATGCT+AGG 0.533828 7_1:+66511959 Msa1031790:CDS
GCTTTGCAAGTGCCTCGGGC+AGG 0.534139 7_1:+66516143 Msa1031790:CDS
TCTCTGCTGCTCGAAAATAA+GGG 0.535230 7_1:-66511374 None:intergenic
TGGTCAAGAGGCAACTGCAC+AGG 0.535935 7_1:+66513249 Msa1031790:CDS
GAGGCTGAGTCATTAGAAGA+AGG 0.539348 7_1:+66513367 Msa1031790:CDS
TCCGGCATTAGCTGGAGCCA+TGG 0.539722 7_1:+66514152 Msa1031790:CDS
AGCAGAGAGAGCCAAAGAAG+AGG 0.540126 7_1:+66518218 Msa1031790:CDS
GCGTGAGATGACGACGGAGG+AGG 0.540424 7_1:-66511732 None:intergenic
TGTGGCATGGATTTGTTGCA+GGG 0.540797 7_1:+66521513 Msa1031790:three_prime_UTR
GAGAGTGGATTGAGTTGAAG+GGG 0.541926 7_1:-66511791 None:intergenic
CATTTCCTGATCCAAACCCT+CGG 0.542062 7_1:+66514043 Msa1031790:CDS
TAGTAACTACGGATTTGGTC+AGG 0.542717 7_1:+66513579 Msa1031790:CDS
GCAAAATCGGCTATAGAGAA+GGG 0.543836 7_1:+66517074 Msa1031790:CDS
GAAAACAGATCCACCAAACT+CGG 0.543899 7_1:-66519530 None:intergenic
ATTTCCTGATCCAAACCCTC+GGG 0.544085 7_1:+66514044 Msa1031790:CDS
TTGAGGGTGCAACGATGACC+AGG 0.544184 7_1:-66521243 None:intergenic
AACATGCCTCATCCACATAC+AGG 0.546803 7_1:-66521650 None:intergenic
GGTGTCTGTGCCGAGTTTGG+TGG 0.546933 7_1:+66519520 Msa1031790:CDS
CTGATCCAAACCCTCGGGTG+CGG 0.549434 7_1:+66514049 Msa1031790:CDS
AATGGCTCTAATTCTAGGAC+CGG 0.549460 7_1:+66511531 Msa1031790:CDS
AGTTTGGTAGGTATGGCTGT+TGG 0.550737 7_1:+66515724 Msa1031790:CDS
CTCGATCCTGTATGTGGATG+AGG 0.550781 7_1:+66521644 Msa1031790:three_prime_UTR
ACAGCATTCTGATAATGTAA+TGG 0.552103 7_1:+66519810 Msa1031790:CDS
GGGCGGCTATAAATGCAATT+GGG 0.552920 7_1:+66514073 Msa1031790:CDS
TCAGGGGCAGCCAAATAAGT+TGG 0.553225 7_1:-66513670 None:intergenic
GGCAATTCTCCTTTCCTCTG+AGG 0.555040 7_1:-66519123 None:intergenic
CTGAGCCACGTTTCCTGCGG+AGG 0.555443 7_1:+66513305 Msa1031790:CDS
TTGGCATGCTGCGGTGAGCG+AGG 0.555498 7_1:+66513537 Msa1031790:CDS
ACTGCTTGACTTGTGTGGCA+TGG 0.555911 7_1:+66521500 Msa1031790:three_prime_UTR
TGTCAACAATTTGCCTCCGC+AGG 0.556267 7_1:-66513318 None:intergenic
GAATGAAGAGTAGACAATTG+AGG 0.556981 7_1:-66512045 None:intergenic
GCTGATGTAATTGACACGTC+AGG 0.557042 7_1:-66516225 None:intergenic
AACAACTTCTTTACAAACTG+CGG 0.559246 7_1:-66513469 None:intergenic
TTATATAATTCCAAATTTGG+TGG 0.559998 7_1:+66517142 Msa1031790:CDS
AACAGACACGCGTCTTCTGA+AGG 0.561349 7_1:-66521327 None:intergenic
ATCAGTCGCTGATTCTTCAC+AGG 0.561950 7_1:+66515472 Msa1031790:CDS
TCCATGGCTCCAGCTAATGC+CGG 0.563505 7_1:-66514153 None:intergenic
TGAGTGTTCAGATGTTCGAC+AGG 0.565579 7_1:+66519376 Msa1031790:CDS
ACTGTATCAAGCATGACTAA+AGG 0.567394 7_1:-66521674 None:intergenic
CTTCCATGAAGAAGTTAGGA+AGG 0.568668 7_1:+66516921 Msa1031790:CDS
AGGCGAGAGAGCGTGCTCCT+GGG 0.570003 7_1:+66513431 Msa1031790:CDS
TTTCGGGGTTAGGGGAAGTG+TGG 0.570235 7_1:-66511690 None:intergenic
ATGATGTAGATATTATGTGC+GGG 0.570591 7_1:+66521128 Msa1031790:intron
GAAAGGGAACTTACAAACAT+AGG 0.571714 7_1:-66518491 None:intergenic
TGAGTTGAAGGGGAGAGGTG+TGG 0.572248 7_1:-66511781 None:intergenic
TGGAAGTAAAATTTAAGGAG+AGG 0.574089 7_1:-66516904 None:intergenic
ATAGCCGCCCACCGCACCCG+AGG 0.574957 7_1:-66514060 None:intergenic
AGCGTGCTCCTGGGATGATG+AGG 0.575247 7_1:+66513440 Msa1031790:CDS
GCTAGATTGGCGATTGCTTG+GGG 0.575752 7_1:+66518402 Msa1031790:intron
AGCAGAAGCGAGTTCCGAAA+CGG 0.576464 7_1:-66511881 None:intergenic
CAAGTCTGGCCCCAAATCTG+TGG 0.576849 7_1:-66514103 None:intergenic
GAAGTGCAAGTTGTTGTTGA+GGG 0.578046 7_1:-66521259 None:intergenic
ACCTGTCTTCCAGGAGCCAG+AGG 0.578090 7_1:+66517249 Msa1031790:intron
GGCATTGAATTCTGGTCAAG+AGG 0.578146 7_1:+66513237 Msa1031790:CDS
TTCTTCTAATGACTCAGCCT+CGG 0.578657 7_1:-66513365 None:intergenic
AGCCTCGGCAATCTGCAGCA+TGG 0.581379 7_1:-66513350 None:intergenic
ACACAGCAGCTTCTTTACAA+AGG 0.582275 7_1:-66521371 None:intergenic
GAAATTGATACTTGCAGCAA+GGG 0.585035 7_1:-66512124 None:intergenic
TATGCTTCGTGCCAAAGCAA+TGG 0.585169 7_1:+66515693 Msa1031790:CDS
ATGCCAACCTGGTCAATCCA+AGG 0.585232 7_1:-66516791 None:intergenic
GTCGCATAGCTTCTTAACGA+TGG 0.586119 7_1:-66511857 None:intergenic
ACTGCTGGTTATACCTGTCA+CGG 0.586216 7_1:-66512173 None:intergenic
CGATGACCAGGTTGAAGCAA+GGG 0.586628 7_1:-66521231 None:intergenic
GGCAATTGTCCACAGATTTG+GGG 0.586673 7_1:+66514094 Msa1031790:CDS
TTCAATTCAATTCACAACGA+TGG 0.589812 7_1:+66511483 Msa1031790:exon
AGGAGCACGCTCTCTCGCCT+CGG 0.590426 7_1:-66513428 None:intergenic
AGACTTTCAATTGCTTTGGG+CGG 0.591625 7_1:+66513613 Msa1031790:CDS
AGGCTGAGTCATTAGAAGAA+GGG 0.592282 7_1:+66513368 Msa1031790:CDS
TCATGCCTCGATCCTGTATG+TGG 0.593599 7_1:+66521638 Msa1031790:three_prime_UTR
TACGCTGATGAGTTGAAGGA+AGG 0.594226 7_1:+66516761 Msa1031790:CDS
ACGATGACCAGGTTGAAGCA+AGG 0.594289 7_1:-66521232 None:intergenic
GCATGACAAAACCCATGTAT+GGG 0.594926 7_1:-66516173 None:intergenic
CACAAACCAGGTGCATCTGT+TGG 0.595239 7_1:-66521437 None:intergenic
TGATAGCATAAATGCAGCAC+AGG 0.595998 7_1:+66519882 Msa1031790:CDS
GCACTTGCACAAATTGCAGA+GGG 0.597196 7_1:+66513721 Msa1031790:CDS
AGCCTTCTCCTCCAAGACAC+TGG 0.597210 7_1:-66516714 None:intergenic
GAGTAACTGACCTCCAACAA+GGG 0.597739 7_1:-66519557 None:intergenic
TGCACTTGCACAAATTGCAG+AGG 0.597774 7_1:+66513720 Msa1031790:CDS
CAGGACTTCCTCCCATACAT+GGG 0.597797 7_1:+66516162 Msa1031790:CDS
AGTCAATGTCTGCATCATGA+GGG 0.598271 7_1:-66513212 None:intergenic
AAGACAAAACCTCAGAGGAA+AGG 0.598498 7_1:+66519114 Msa1031790:CDS
ACGGAGGAGGATGGTGGACA+TGG 0.599090 7_1:-66511719 None:intergenic
TGATCCTGCTTGGCATGCTG+CGG 0.600005 7_1:+66513528 Msa1031790:CDS
GGAACGTTGGTCGTTGATGG+TGG 0.600639 7_1:-66511593 None:intergenic
TTGTGATTAGGGATTCGAAG+TGG 0.600736 7_1:-66511561 None:intergenic
TGTTGGAAAAGAGAAGTTCA+GGG 0.601486 7_1:+66515741 Msa1031790:CDS
ATAGAGAAGGGGCAGTCACA+AGG 0.604230 7_1:+66517086 Msa1031790:CDS
AAGTTGTGCAGACTGGAGCA+AGG 0.604837 7_1:-66516199 None:intergenic
AAACAATTAGGATGATAGGA+TGG 0.605832 7_1:-66521285 None:intergenic
TGTAACATGTAACTCGCGGT+TGG 0.607384 7_1:-66515984 None:intergenic
GGTAACTTCCTCATCATCCC+AGG 0.608657 7_1:-66513448 None:intergenic
GTGCTGCATTTATGCTATCA+CGG 0.611301 7_1:-66519879 None:intergenic
TGTGCAGACTGGAGCAAGGG+AGG 0.611908 7_1:-66516195 None:intergenic
TTCAGACCAACAGATGCACC+TGG 0.612091 7_1:+66521431 Msa1031790:three_prime_UTR
ATTATAGAGTGGAAAGCAGA+TGG 0.615282 7_1:+66515421 Msa1031790:intron
TGAAGAAAGAGAACTACTCA+AGG 0.616789 7_1:+66518251 Msa1031790:CDS
TCAAGAGGCAACTGCACAGG+AGG 0.618446 7_1:+66513252 Msa1031790:CDS
GGCGTTGAACGATCAAAACC+AGG 0.620419 7_1:+66511504 Msa1031790:CDS
GGACTGAGCCACGTTTCCTG+CGG 0.621090 7_1:+66513302 Msa1031790:CDS
ATTTGCCTCCGCAGGAAACG+TGG 0.621262 7_1:-66513310 None:intergenic
TATCAACTGCTTGACTTGTG+TGG 0.621414 7_1:+66521495 Msa1031790:three_prime_UTR
ATTGATACTTGCAGCAAGGG+CGG 0.621696 7_1:-66512121 None:intergenic
AATTTGATGAAGATGATGAC+AGG 0.621774 7_1:+66516262 Msa1031790:CDS
GAGATGACGACGGAGGAGGA+TGG 0.621924 7_1:-66511728 None:intergenic
CGAAATTGATACTTGCAGCA+AGG 0.622904 7_1:-66512125 None:intergenic
TGAGTAACTGACCTCCAACA+AGG 0.625252 7_1:-66519558 None:intergenic
GCTGGTGAGACTAGTAACTA+CGG 0.626383 7_1:+66513568 Msa1031790:CDS
GTGAGCGAGGATGATGATGC+TGG 0.627605 7_1:+66513550 Msa1031790:CDS
GAGATGAGAGAAGAAGAGAA+CGG 0.627726 7_1:-66511813 None:intergenic
AGTTGTGCAGACTGGAGCAA+GGG 0.630199 7_1:-66516198 None:intergenic
GTCAATGTCTGCATCATGAG+GGG 0.630206 7_1:-66513211 None:intergenic
TGAAGTGCAAGTTGTTGTTG+AGG 0.630485 7_1:-66521260 None:intergenic
ATATTGAGGATGATCCTGCT+TGG 0.630778 7_1:+66513518 Msa1031790:CDS
GGTCGTTGATGGTGGACATG+AGG 0.631868 7_1:-66511585 None:intergenic
ATGACGACGGAGGAGGATGG+TGG 0.632074 7_1:-66511725 None:intergenic
TATGATGTAGATATTATGTG+CGG 0.632192 7_1:+66521127 Msa1031790:intron
GCAAGTCAGGCCAAGAAGCG+AGG 0.632791 7_1:-66511918 None:intergenic
CATTGAAACCATTACTCTCG+GGG 0.635821 7_1:+66516670 Msa1031790:CDS
AGACGCGTGTCTGTTGTCAT+GGG 0.638307 7_1:+66521335 Msa1031790:three_prime_UTR
AAAGTGCAAACCTGTACTCG+AGG 0.643138 7_1:-66514189 None:intergenic
TGGACATGGTGCGTGTTTCG+GGG 0.644346 7_1:-66511705 None:intergenic
CTGGTTATACCTGTCACGGT+CGG 0.644881 7_1:-66512169 None:intergenic
CAAAATCGGCTATAGAGAAG+GGG 0.649523 7_1:+66517075 Msa1031790:CDS
TGATGTAGATATTATGTGCG+GGG 0.651326 7_1:+66521129 Msa1031790:intron
TGCCATGCTGCAGATTGCCG+AGG 0.655913 7_1:+66513348 Msa1031790:CDS
TGACAAAACCCATGTATGGG+AGG 0.656396 7_1:-66516170 None:intergenic
ATAAGGTACTAAAATATCTG+GGG 0.656506 7_1:-66514932 None:intergenic
TTTGGTGGAAGCTTTACACA+AGG 0.658617 7_1:+66517157 Msa1031790:CDS
GTTTGTTGTTACACTTGCCG+AGG 0.659599 7_1:+66513411 Msa1031790:CDS
TATAAAAGGTGATTTAATCG+AGG 0.661157 7_1:+66520796 Msa1031790:CDS
CTAATGCCGGAAGCACTAAG+TGG 0.661368 7_1:-66514140 None:intergenic
AGTAACTGACCTCCAACAAG+GGG 0.665562 7_1:-66519556 None:intergenic
AAAGCAAGTAAGGAGCATTG+TGG 0.670200 7_1:+66518146 Msa1031790:CDS
CTCATCCACATACAGGATCG+AGG 0.672777 7_1:-66521643 None:intergenic
GGCATGGATTTGTTGCAGGG+AGG 0.673204 7_1:+66521516 Msa1031790:three_prime_UTR
GGAAAGCAGATGGTTCAAGA+GGG 0.674345 7_1:+66515431 Msa1031790:CDS
TACTTGTAACATGTAACTCG+CGG 0.676630 7_1:-66515988 None:intergenic
AGATGAAAGAGTCGTCGTGG+TGG 0.677354 7_1:-66511756 None:intergenic
GCAATCAAGAAACACAAACC+AGG 0.682482 7_1:-66521449 None:intergenic
GGCAATACGAACATCCGAAG+AGG 0.686647 7_1:-66512100 None:intergenic
GGGTAAAGACAAAACCTCAG+AGG 0.692614 7_1:+66519109 Msa1031790:intron
TTTAAGGAGAGGAACCAATG+TGG 0.693314 7_1:-66516893 None:intergenic
CAACTGAACAAACTGTGAGT+CGG 0.697226 7_1:+66521162 Msa1031790:CDS
TAGGATAAGAAAGTTTAGGG+AGG 0.700879 7_1:+66511317 None:intergenic
GGCGCGTGAGATGACGACGG+AGG 0.701509 7_1:-66511735 None:intergenic
CATGATGCAGACATTGACTG+AGG 0.701645 7_1:+66513216 Msa1031790:CDS
ATGGGAGGAAGTCCTGCCCG+AGG 0.705946 7_1:-66516155 None:intergenic
CAAGTGCAACGAGTGCAGCA+TGG 0.707450 7_1:-66513705 None:intergenic
GTTGAAGCAAGGGTAGAAGG+CGG 0.720013 7_1:-66521221 None:intergenic
GATAGATGAAAGAGTCGTCG+TGG 0.754182 7_1:-66511759 None:intergenic
GGTGGCGCGTGAGATGACGA+CGG 0.767695 7_1:-66511738 None:intergenic
CTGCATTTATGCTATCACGG+TGG 0.809952 7_1:-66519876 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAATCTATTTAGTT+AGG - chr7_1:66513148-66513167 None:intergenic 10.0%
!! TTCATTAATTTATAATTGTA+TGG + chr7_1:66516482-66516501 Msa1031790:intron 10.0%
!!! TGTTTTCTATTTTATTTTAT+TGG + chr7_1:66516814-66516833 Msa1031790:intron 10.0%
!!! TTTAATATTAGAAAAGTATT+GGG - chr7_1:66517879-66517898 None:intergenic 10.0%
!!! TTTTAATATTAGAAAAGTAT+TGG - chr7_1:66517880-66517899 None:intergenic 10.0%
!! TCTAATATTAAAAAAAGAAT+TGG + chr7_1:66517887-66517906 Msa1031790:intron 10.0%
!!! ATTTTTTATAAAGTTGTATC+TGG + chr7_1:66514520-66514539 Msa1031790:intron 15.0%
!!! ATTTATTACTTTTATATTGC+AGG + chr7_1:66514867-66514886 Msa1031790:intron 15.0%
!! TAACAAATTAAAAACTTTCA+TGG + chr7_1:66515583-66515602 Msa1031790:intron 15.0%
!!! AGAGATATTGATTATATTAA+TGG + chr7_1:66516597-66516616 Msa1031790:intron 15.0%
!!! AAGTTAGCAAATTAATATTT+TGG - chr7_1:66516851-66516870 None:intergenic 15.0%
!! TGATTATATAATTCCAAATT+TGG + chr7_1:66517139-66517158 Msa1031790:CDS 15.0%
!! TATTTGAAAAAAGGTAAAAA+AGG - chr7_1:66517393-66517412 None:intergenic 15.0%
!! CAAACTTAATAAATTATAGA+TGG - chr7_1:66517736-66517755 None:intergenic 15.0%
!! CATCTATAATTTATTAAGTT+TGG + chr7_1:66517734-66517753 Msa1031790:intron 15.0%
!!! TGTTTTTTAATGAGAAATAA+AGG + chr7_1:66518742-66518761 Msa1031790:intron 15.0%
!!! GATGTAGAAAATAATTTTTT+TGG + chr7_1:66519271-66519290 Msa1031790:intron 15.0%
!!! AGAAAATAATTTTTTTGGAA+TGG + chr7_1:66519276-66519295 Msa1031790:intron 15.0%
!!! TATGATTTTGTTATTTAATG+AGG + chr7_1:66519438-66519457 Msa1031790:intron 15.0%
!! AAAAAAACTGATTATAACAA+TGG - chr7_1:66519729-66519748 None:intergenic 15.0%
!! ATTTAAGTGTTATAGTTAAA+AGG + chr7_1:66521589-66521608 Msa1031790:three_prime_UTR 15.0%
!! ACTAGATTATGCAAATATAT+AGG - chr7_1:66512593-66512612 None:intergenic 20.0%
!!! AGAAAGTTATTGATTATTGT+TGG + chr7_1:66512960-66512979 Msa1031790:intron 20.0%
!!! TATTTCAAGTTTTAGTTGTT+TGG + chr7_1:66513087-66513106 Msa1031790:intron 20.0%
!! AAGTTTGCATTTGTAATATT+AGG + chr7_1:66513173-66513192 Msa1031790:intron 20.0%
!! AATAAAGTTTACAATGTACT+TGG - chr7_1:66514223-66514242 None:intergenic 20.0%
!!! TCATTAATGTTAGTTTAAGA+TGG + chr7_1:66514311-66514330 Msa1031790:intron 20.0%
!! AGAATACAACATATAATCAA+GGG - chr7_1:66514377-66514396 None:intergenic 20.0%
!! TAGAATACAACATATAATCA+AGG - chr7_1:66514378-66514397 None:intergenic 20.0%
!! GATTATATGTTGTATTCTAT+TGG + chr7_1:66514379-66514398 Msa1031790:intron 20.0%
!! AATTATAAAGAGATAAGCTT+GGG - chr7_1:66514739-66514758 None:intergenic 20.0%
!! TAATTATAAAGAGATAAGCT+TGG - chr7_1:66514740-66514759 None:intergenic 20.0%
!!! AATAAGGTACTAAAATATCT+GGG - chr7_1:66514936-66514955 None:intergenic 20.0%
!!! AAATAAGGTACTAAAATATC+TGG - chr7_1:66514937-66514956 None:intergenic 20.0%
!!! AGATATTTTAGTACCTTATT+TGG + chr7_1:66514936-66514955 Msa1031790:CDS 20.0%
!!! TTTTTGCCAATAAATATCAA+TGG - chr7_1:66515008-66515027 None:intergenic 20.0%
!!! TTCTCTTTTGTTTATTGTTT+TGG + chr7_1:66515132-66515151 Msa1031790:intron 20.0%
!!! TTTTACTCATCTTTGAATTT+TGG + chr7_1:66515194-66515213 Msa1031790:intron 20.0%
!!! CTTTAAGTTTTCATAGATTT+GGG + chr7_1:66515350-66515369 Msa1031790:intron 20.0%
!! TAAATTAAAAATCACCTGTT+TGG - chr7_1:66515773-66515792 None:intergenic 20.0%
!! AGGTGAAATAAAGAATAAAA+TGG - chr7_1:66516364-66516383 None:intergenic 20.0%
!! TACTTCATTGTATTAACAAA+AGG + chr7_1:66516528-66516547 Msa1031790:intron 20.0%
!!! TATAATCAGACAATTGTTTT+AGG - chr7_1:66517127-66517146 None:intergenic 20.0%
!! TTATATAATTCCAAATTTGG+TGG + chr7_1:66517142-66517161 Msa1031790:CDS 20.0%
!!! TACCTTTTTTCAAATAATTG+TGG + chr7_1:66517397-66517416 Msa1031790:intron 20.0%
!!! ACCTTTTTTCAAATAATTGT+GGG + chr7_1:66517398-66517417 Msa1031790:intron 20.0%
!! ATTTGATCAAATAATCCAAA+AGG - chr7_1:66518568-66518587 None:intergenic 20.0%
!! TTTCTCATTAAAAAACAATC+TGG - chr7_1:66518739-66518758 None:intergenic 20.0%
!!! CACAATATTTTTTTCTTTTC+TGG - chr7_1:66518780-66518799 None:intergenic 20.0%
!!! TTTAAAGTGGGAATTAAAAT+AGG - chr7_1:66518807-66518826 None:intergenic 20.0%
!!! CATCTAATAACATTTAAAGT+GGG - chr7_1:66518819-66518838 None:intergenic 20.0%
!! TCATCTAATAACATTTAAAG+TGG - chr7_1:66518820-66518839 None:intergenic 20.0%
!! TTAAAGAATGTAAAGAAATC+TGG + chr7_1:66518891-66518910 Msa1031790:intron 20.0%
!!! AGCGAAATTTTCTTATATTA+TGG + chr7_1:66518942-66518961 Msa1031790:intron 20.0%
!! AATGTCATCAAATATACAAA+TGG - chr7_1:66519147-66519166 None:intergenic 20.0%
!! ATAAAGTATAAACCAAAGAT+GGG - chr7_1:66519404-66519423 None:intergenic 20.0%
!! TATAAAGTATAAACCAAAGA+TGG - chr7_1:66519405-66519424 None:intergenic 20.0%
!! TAAAATGAGAAATAAGAAAC+TGG - chr7_1:66519586-66519605 None:intergenic 20.0%
!! CAATTCATAATTTATTACGT+CGG + chr7_1:66520588-66520607 Msa1031790:intron 20.0%
!! TCTAAATTTCAATTCTACAA+GGG - chr7_1:66520686-66520705 None:intergenic 20.0%
!!! TTACTTCATTGATTATTTCT+TGG + chr7_1:66520738-66520757 Msa1031790:intron 20.0%
!! TGAATGTACATAATATGTTA+AGG - chr7_1:66520933-66520952 None:intergenic 20.0%
!!! AAACAAAAGTAATTTTAGAG+TGG - chr7_1:66521098-66521117 None:intergenic 20.0%
!!! ACTCTAAAATTACTTTTGTT+TGG + chr7_1:66521097-66521116 Msa1031790:intron 20.0%
!! ACATAATATCTACATCATAA+TGG - chr7_1:66521126-66521145 None:intergenic 20.0%
!! AAAAACAAAAGAATACTATG+TGG - chr7_1:66521703-66521722 None:intergenic 20.0%
!!! AGTATTCTTTTGTTTTTTTG+AGG + chr7_1:66521706-66521725 Msa1031790:three_prime_UTR 20.0%
!!! GTATTCTTTTGTTTTTTTGA+GGG + chr7_1:66521707-66521726 Msa1031790:three_prime_UTR 20.0%
! TTGCGTAAGCTAAAAAAAAA+AGG - chr7_1:66512472-66512491 None:intergenic 25.0%
!!! TGTTTTTTCATAAACTACCT+TGG - chr7_1:66512529-66512548 None:intergenic 25.0%
! CTTATCATGATAAATGCTTA+AGG - chr7_1:66512852-66512871 None:intergenic 25.0%
!!! TAGTTGTTTGGTTCAATTTT+TGG + chr7_1:66513099-66513118 Msa1031790:intron 25.0%
! CATTTGTAATATTAGGTTTC+AGG + chr7_1:66513180-66513199 Msa1031790:intron 25.0%
! ATTTGCTTAAAGAACAAAAG+AGG - chr7_1:66514265-66514284 None:intergenic 25.0%
! AACTAACATTAATGAGAACA+TGG - chr7_1:66514306-66514325 None:intergenic 25.0%
!!! ACAATTTTGTTTCTATGCAT+TGG + chr7_1:66514408-66514427 Msa1031790:intron 25.0%
!!! ATTATGCATTTTTAGTAGTC+TGG + chr7_1:66514637-66514656 Msa1031790:intron 25.0%
! TCATATTTATGCATAAGTAG+TGG - chr7_1:66514786-66514805 None:intergenic 25.0%
! ATGATGAACTAATGACTTTA+TGG - chr7_1:66514845-66514864 None:intergenic 25.0%
!! ATAAGGTACTAAAATATCTG+GGG - chr7_1:66514935-66514954 None:intergenic 25.0%
!!! ATTTTAGTACCTTATTTGGA+TGG + chr7_1:66514940-66514959 Msa1031790:CDS 25.0%
!!! TTTTAGTACCTTATTTGGAT+GGG + chr7_1:66514941-66514960 Msa1031790:CDS 25.0%
! TGTTTGCCATTGATATTTAT+TGG + chr7_1:66514999-66515018 Msa1031790:intron 25.0%
!!! GCTTTAAGTTTTCATAGATT+TGG + chr7_1:66515349-66515368 Msa1031790:intron 25.0%
! TAAAAACTTTCATGGTTAAC+AGG + chr7_1:66515591-66515610 Msa1031790:intron 25.0%
!!! AACAAAATTGCTTTTAGGTA+TGG - chr7_1:66515649-66515668 None:intergenic 25.0%
!!! CATTCAACAAAATTGCTTTT+AGG - chr7_1:66515654-66515673 None:intergenic 25.0%
!! TTAGATAATCATGTTTCTGA+CGG + chr7_1:66515825-66515844 Msa1031790:intron 25.0%
! AAAAGCTAAATGAAAATCTG+AGG - chr7_1:66516102-66516121 None:intergenic 25.0%
!!! CATTTAGCTTTTATGTTATC+AGG + chr7_1:66516110-66516129 Msa1031790:intron 25.0%
! AAAGAAAGGAATTCATATTG+AGG - chr7_1:66516384-66516403 None:intergenic 25.0%
! TAGAAACTCATACAAAAGAA+AGG - chr7_1:66516398-66516417 None:intergenic 25.0%
! CTTCATGGAAGTAAAATTTA+AGG - chr7_1:66516912-66516931 None:intergenic 25.0%
! AAATAGACAAAATAGAAGCA+AGG - chr7_1:66516981-66517000 None:intergenic 25.0%
! GTTGCATTAAAAATTCAGTA+AGG - chr7_1:66517012-66517031 None:intergenic 25.0%
! GTTTGTAACATTCATTTATG+AGG + chr7_1:66517319-66517338 Msa1031790:intron 25.0%
! ACCCACAATTATTTGAAAAA+AGG - chr7_1:66517402-66517421 None:intergenic 25.0%
! ATAGCCTGAAATGAAAATTA+TGG + chr7_1:66517503-66517522 Msa1031790:intron 25.0%
!! AGTTCCATAATTTTCATTTC+AGG - chr7_1:66517510-66517529 None:intergenic 25.0%
!!! AATATTAGAAAAGTATTGGG+CGG - chr7_1:66517876-66517895 None:intergenic 25.0%
! TAAAAAAAGAATTGGAGTGT+AGG + chr7_1:66517895-66517914 Msa1031790:intron 25.0%
! TGTAGATAGAGTGATATATA+TGG - chr7_1:66517974-66517993 None:intergenic 25.0%
! TCAAAAGTAAAATTAGCTAG+TGG + chr7_1:66518087-66518106 Msa1031790:intron 25.0%
! GACTTTGACAAAAACATTTA+GGG + chr7_1:66518424-66518443 Msa1031790:CDS 25.0%
! TGTTATTAGATGAGATTACA+TGG + chr7_1:66518827-66518846 Msa1031790:intron 25.0%
! TGATTATTAGTTGTGAACAA+GGG - chr7_1:66519089-66519108 None:intergenic 25.0%
! TTGTTCACAACTAATAATCA+GGG + chr7_1:66519089-66519108 Msa1031790:intron 25.0%
!!! TAATTTTTTTGGAATGGTTC+TGG + chr7_1:66519282-66519301 Msa1031790:intron 25.0%
! TTATGTTGCTACAGATATTA+TGG + chr7_1:66519317-66519336 Msa1031790:intron 25.0%
! CAAAAATTGAATATCTTCTC+AGG + chr7_1:66519480-66519499 Msa1031790:intron 25.0%
!! TTGTTGTTGTTGTATAACAA+TGG - chr7_1:66519622-66519641 None:intergenic 25.0%
!!! TTTTTTTTGTTCTTCTACAG+AGG + chr7_1:66519747-66519766 Msa1031790:intron 25.0%
!! TAATGATTTTCTGATCATCA+TGG + chr7_1:66520022-66520041 Msa1031790:intron 25.0%
! ATTGCTTATTCTGTATAAGA+AGG - chr7_1:66520365-66520384 None:intergenic 25.0%
!!! GATTATATACTTGCTGTATT+TGG + chr7_1:66520388-66520407 Msa1031790:intron 25.0%
! ACTGTGATTATAAATTTACG+AGG + chr7_1:66520449-66520468 Msa1031790:intron 25.0%
!! AGCAGAAAAGAAAAAGTTTT+TGG - chr7_1:66520524-66520543 None:intergenic 25.0%
! CTCTAAATTTCAATTCTACA+AGG - chr7_1:66520687-66520706 None:intergenic 25.0%
!! TCGATTAAATCACCTTTTAT+AGG - chr7_1:66520797-66520816 None:intergenic 25.0%
! TATAAAAGGTGATTTAATCG+AGG + chr7_1:66520796-66520815 Msa1031790:CDS 25.0%
! CATTTAATCAAAACATGTTC+TGG - chr7_1:66520875-66520894 None:intergenic 25.0%
! AGATCAGATAAAGAACTTAT+AGG + chr7_1:66520962-66520981 Msa1031790:intron 25.0%
!! TGGAAAGATATTGATTGTTA+TGG - chr7_1:66520988-66521007 None:intergenic 25.0%
! TTACAGAAGTAACTAAAAAC+TGG - chr7_1:66521053-66521072 None:intergenic 25.0%
!!! AAGTAATTTTAGAGTGGAAA+TGG - chr7_1:66521092-66521111 None:intergenic 25.0%
! TATGATGTAGATATTATGTG+CGG + chr7_1:66521127-66521146 Msa1031790:intron 25.0%
!!! TTTTGATGAGTCATTTTTCT+TGG + chr7_1:66521739-66521758 Msa1031790:three_prime_UTR 25.0%
! TTTCAAAACGAAAAAACAAG+AGG + chr7_1:66521868-66521887 Msa1031790:three_prime_UTR 25.0%
! AAAAAAATTGTGTTTGCATG+TGG - chr7_1:66521898-66521917 None:intergenic 25.0%
!! GTTTTGCTTTTGCTTTTGAA+TGG - chr7_1:66511355-66511374 None:intergenic 30.0%
TTCAATTCAATTCACAACGA+TGG + chr7_1:66511483-66511502 Msa1031790:exon 30.0%
! TTCTTAACGATGGATTTGAT+TGG - chr7_1:66511850-66511869 None:intergenic 30.0%
ATAACCAGCAGTGAAAATTA+TGG + chr7_1:66512184-66512203 Msa1031790:intron 30.0%
AAATTGAACCATAACTCCTT+AGG - chr7_1:66512374-66512393 None:intergenic 30.0%
!! AAGTTTGTTGAATTGAACTC+AGG + chr7_1:66512411-66512430 Msa1031790:intron 30.0%
!! AGTTTGTTGAATTGAACTCA+GGG + chr7_1:66512412-66512431 Msa1031790:intron 30.0%
TATTATTCCTAAGCTTACCA+AGG + chr7_1:66512509-66512528 Msa1031790:intron 30.0%
CATAAGATAAGCTCACATAA+GGG - chr7_1:66512651-66512670 None:intergenic 30.0%
TCATAAGATAAGCTCACATA+AGG - chr7_1:66512652-66512671 None:intergenic 30.0%
!! TAGGTTTTGTGAAACTGTTT+GGG + chr7_1:66512674-66512693 Msa1031790:intron 30.0%
! ACTAAACACATACTCTAAGA+GGG - chr7_1:66513028-66513047 None:intergenic 30.0%
AACTAAACACATACTCTAAG+AGG - chr7_1:66513029-66513048 None:intergenic 30.0%
TAGAGTATGTGTTTAGTTAG+AGG + chr7_1:66513031-66513050 Msa1031790:intron 30.0%
AGAGTATGTGTTTAGTTAGA+GGG + chr7_1:66513032-66513051 Msa1031790:intron 30.0%
AACAACTTCTTTACAAACTG+CGG - chr7_1:66513472-66513491 None:intergenic 30.0%
CAGTTTGTAAAGAAGTTGTT+TGG + chr7_1:66513472-66513491 Msa1031790:CDS 30.0%
!! TGTGCTAATGAATTTGTTGT+TGG + chr7_1:66513495-66513514 Msa1031790:CDS 30.0%
!! GAATTTGTTGTTGGATATTG+AGG + chr7_1:66513504-66513523 Msa1031790:CDS 30.0%
AGATAGACTTTCAATTGCTT+TGG + chr7_1:66513609-66513628 Msa1031790:CDS 30.0%
GATAGACTTTCAATTGCTTT+GGG + chr7_1:66513610-66513629 Msa1031790:CDS 30.0%
! AGGTATTCTTTTACTTGTAC+TGG + chr7_1:66513752-66513771 Msa1031790:intron 30.0%
! TTTGGAGCATGTATTATCAA+TGG + chr7_1:66514011-66514030 Msa1031790:CDS 30.0%
!! AGGATTTTGAAAATCATCCA+TGG - chr7_1:66514172-66514191 None:intergenic 30.0%
!! CTTTATTGATTCAAGTCACT+CGG + chr7_1:66514236-66514255 Msa1031790:intron 30.0%
!! TTTATTGATTCAAGTCACTC+GGG + chr7_1:66514237-66514256 Msa1031790:intron 30.0%
! ATGTTAGTTTAAGATGGACT+TGG + chr7_1:66514317-66514336 Msa1031790:intron 30.0%
! TAAGATGGACTTGGTAAAAT+TGG + chr7_1:66514326-66514345 Msa1031790:intron 30.0%
ACATATAATCAAGGGACAAA+TGG - chr7_1:66514369-66514388 None:intergenic 30.0%
TTACTTTGATCAAACACAAG+TGG - chr7_1:66514440-66514459 None:intergenic 30.0%
TATAACCTATACAATCCATG+GGG - chr7_1:66514486-66514505 None:intergenic 30.0%
CTATAACCTATACAATCCAT+GGG - chr7_1:66514487-66514506 None:intergenic 30.0%
TCTATAACCTATACAATCCA+TGG - chr7_1:66514488-66514507 None:intergenic 30.0%
!! TTGACTCGAGAGTATTAAAT+TGG + chr7_1:66514597-66514616 Msa1031790:intron 30.0%
AAATATGAATCTTGAGTTCC+CGG + chr7_1:66514798-66514817 Msa1031790:intron 30.0%
TCAAATGAGATATCAAAGAC+CGG - chr7_1:66514820-66514839 None:intergenic 30.0%
!! TAATATCTTTTTGGTGACTG+AGG + chr7_1:66515046-66515065 Msa1031790:intron 30.0%
!!! TCGATTTCGTTTTAAGGAAA+TGG + chr7_1:66515099-66515118 Msa1031790:intron 30.0%
TTCATGCATGAATTATAGAG+TGG + chr7_1:66515410-66515429 Msa1031790:intron 30.0%
! GATTTCGTTCTTCTTTTACT+AGG + chr7_1:66515911-66515930 Msa1031790:intron 30.0%
! GTTCTTCTTTTACTAGGTTA+TGG + chr7_1:66515917-66515936 Msa1031790:intron 30.0%
ACAAACGGAAAGGAAAAAAA+AGG - chr7_1:66516018-66516037 None:intergenic 30.0%
!!! TTTTTTTCCTTTCCGTTTGT+TGG + chr7_1:66516018-66516037 Msa1031790:intron 30.0%
AATTTGATGAAGATGATGAC+AGG + chr7_1:66516262-66516281 Msa1031790:CDS 30.0%
AAACACATCACATGATAACA+TGG - chr7_1:66516335-66516354 None:intergenic 30.0%
!! CTAACTTGCTTGAATCATAT+AGG + chr7_1:66516864-66516883 Msa1031790:intron 30.0%
TGGAAGTAAAATTTAAGGAG+AGG - chr7_1:66516907-66516926 None:intergenic 30.0%
TTTACTTCCATGAAGAAGTT+AGG + chr7_1:66516917-66516936 Msa1031790:CDS 30.0%
! GCTTCTATTTTGTCTATTTC+TGG + chr7_1:66516982-66517001 Msa1031790:intron 30.0%
CAGAACCAAAAAATCAGAAT+AGG - chr7_1:66517194-66517213 None:intergenic 30.0%
TAAAAAAGGATTGCATGTCA+TGG - chr7_1:66517379-66517398 None:intergenic 30.0%
TTTCAAATAATTGTGGGTGA+TGG + chr7_1:66517404-66517423 Msa1031790:intron 30.0%
!! GATAGACAAATGATTTGTTG+CGG + chr7_1:66517434-66517453 Msa1031790:intron 30.0%
GAAAGTTATAAGGAGGTTTA+AGG - chr7_1:66517557-66517576 None:intergenic 30.0%
TCTGAATGGATAAGATCAAA+AGG + chr7_1:66517606-66517625 Msa1031790:intron 30.0%
ATAAATTATAGATGGTCCCA+AGG - chr7_1:66517728-66517747 None:intergenic 30.0%
AGTGATATATATGGCAGAAT+GGG - chr7_1:66517965-66517984 None:intergenic 30.0%
! TACTTTTGAACAACAGCTTA+TGG - chr7_1:66518076-66518095 None:intergenic 30.0%
ATCTAGATGAAAAGCAAGTA+AGG + chr7_1:66518136-66518155 Msa1031790:CDS 30.0%
! AATCTTTTTGTGTGCTAGAT+TGG + chr7_1:66518389-66518408 Msa1031790:intron 30.0%
GGACTTTGACAAAAACATTT+AGG + chr7_1:66518423-66518442 Msa1031790:CDS 30.0%
! ATGAATCTTCGTATTCCTTT+TGG + chr7_1:66518550-66518569 Msa1031790:intron 30.0%
CAAAAGAAGAAAAAGCTATG+TGG - chr7_1:66518611-66518630 None:intergenic 30.0%
AAGGAAAAAGATACGAGAAA+GGG - chr7_1:66518634-66518653 None:intergenic 30.0%
AAAGGAAAAAGATACGAGAA+AGG - chr7_1:66518635-66518654 None:intergenic 30.0%
!! CCTTTGAAGTAGATGTTTAA+AGG - chr7_1:66518653-66518672 None:intergenic 30.0%
CCTTTAAACATCTACTTCAA+AGG + chr7_1:66518650-66518669 Msa1031790:intron 30.0%
AAAGGAAAAAACGATTCTGT+CGG + chr7_1:66518668-66518687 Msa1031790:intron 30.0%
TTTACAAGAAAGGACATGTT+TGG - chr7_1:66518694-66518713 None:intergenic 30.0%
AAACATGTCCTTTCTTGTAA+AGG + chr7_1:66518693-66518712 Msa1031790:intron 30.0%
AACTAATGCCTTTACAAGAA+AGG - chr7_1:66518704-66518723 None:intergenic 30.0%
TCATTCACAAATCATAAGAG+GGG - chr7_1:66518990-66519009 None:intergenic 30.0%
GTCATTCACAAATCATAAGA+GGG - chr7_1:66518991-66519010 None:intergenic 30.0%
ACGTCTTTAAATGAAGCTAT+AGG - chr7_1:66519036-66519055 None:intergenic 30.0%
! CTTTTTATTCAGAACGGTAT+AGG - chr7_1:66519063-66519082 None:intergenic 30.0%
! GGGAAACTTTTTATTCAGAA+CGG - chr7_1:66519069-66519088 None:intergenic 30.0%
CTGATTATTAGTTGTGAACA+AGG - chr7_1:66519090-66519109 None:intergenic 30.0%
CTTGTTCACAACTAATAATC+AGG + chr7_1:66519088-66519107 Msa1031790:intron 30.0%
! TCCGTCTTTCTTTTATTCTT+CGG + chr7_1:66519232-66519251 Msa1031790:intron 30.0%
TGGTTTCAGATAGAACATTA+TGG - chr7_1:66519693-66519712 None:intergenic 30.0%
! TAATGTTCTATCTGAAACCA+TGG + chr7_1:66519693-66519712 Msa1031790:intron 30.0%
! ACAGCATTCTGATAATGTAA+TGG + chr7_1:66519810-66519829 Msa1031790:CDS 30.0%
! CTTTTGCCAATATTACACTA+TGG + chr7_1:66520087-66520106 Msa1031790:intron 30.0%
AGGAAACCATAGTGTAATAT+TGG - chr7_1:66520096-66520115 None:intergenic 30.0%
GGCATGATATTTATGAATCA+CGG + chr7_1:66520139-66520158 Msa1031790:intron 30.0%
ACATCATTAAGTTTGCATCT+GGG - chr7_1:66520176-66520195 None:intergenic 30.0%
! ATTTTTGTGATGCTAGTTGA+AGG + chr7_1:66520211-66520230 Msa1031790:intron 30.0%
! GAATGTATCAGCTTTTTACA+AGG - chr7_1:66520273-66520292 None:intergenic 30.0%
TTAGTTAATCCCTAAGACTA+AGG + chr7_1:66520412-66520431 Msa1031790:intron 30.0%
TAGTTAATCCCTAAGACTAA+GGG + chr7_1:66520413-66520432 Msa1031790:intron 30.0%
TAGTAAAGAGAGGTTAAAAG+TGG + chr7_1:66520544-66520563 Msa1031790:intron 30.0%
TTAAAAGTGGACACAGTTAA+GGG + chr7_1:66520557-66520576 Msa1031790:intron 30.0%
AATATCTTGACTGCATAAAC+TGG + chr7_1:66520619-66520638 Msa1031790:intron 30.0%
! ATTGATTATTTCTTGGTTGC+AGG + chr7_1:66520745-66520764 Msa1031790:intron 30.0%
TTTCAACCATTGAACAAAGA+AGG - chr7_1:66520838-66520857 None:intergenic 30.0%
TTCTTTGTTCAATGGTTGAA+AGG + chr7_1:66520837-66520856 Msa1031790:CDS 30.0%
ACATAATATGTTAAGGCAAC+AGG - chr7_1:66520926-66520945 None:intergenic 30.0%
! AAGTAACTAAAAACTGGCTT+TGG - chr7_1:66521047-66521066 None:intergenic 30.0%
ATGATGTAGATATTATGTGC+GGG + chr7_1:66521128-66521147 Msa1031790:intron 30.0%
AAACAATTAGGATGATAGGA+TGG - chr7_1:66521288-66521307 None:intergenic 30.0%
! TCCTATCATCCTAATTGTTT+TGG + chr7_1:66521288-66521307 Msa1031790:exon 30.0%
TCCAAAACAATTAGGATGAT+AGG - chr7_1:66521292-66521311 None:intergenic 30.0%
!! AAAAAGCACTACAATGCTAA+AGG - chr7_1:66521412-66521431 None:intergenic 30.0%
GATACTTGGATTACCAAATA+TGG - chr7_1:66521479-66521498 None:intergenic 30.0%
! GTTAGATTGAGAAATGGTTT+TGG + chr7_1:66521548-66521567 Msa1031790:three_prime_UTR 30.0%
!!! AAAGGAATTTTTTGTGTCGA+AGG + chr7_1:66521607-66521626 Msa1031790:three_prime_UTR 30.0%
!!! AATTTTTTGTGTCGAAGGAA+TGG + chr7_1:66521612-66521631 Msa1031790:three_prime_UTR 30.0%
!!! ATTTTTTGTGTCGAAGGAAT+GGG + chr7_1:66521613-66521632 Msa1031790:three_prime_UTR 30.0%
!! TTGCTTTTGCTTTTGAATGG+CGG - chr7_1:66511352-66511371 None:intergenic 35.0%
!!! GAGAGTGTTTTTGATGGATA+GGG - chr7_1:66511457-66511476 None:intergenic 35.0%
!!! AGAGAGTGTTTTTGATGGAT+AGG - chr7_1:66511458-66511477 None:intergenic 35.0%
!!! TTGAGAGAGAGTGTTTTTGA+TGG - chr7_1:66511463-66511482 None:intergenic 35.0%
! ATTGAAGAGATTTTCGGCTT+GGG - chr7_1:66511617-66511636 None:intergenic 35.0%
! GCAGAGATTGAAGAGATTTT+CGG - chr7_1:66511623-66511642 None:intergenic 35.0%
AGTTTGAGGATTAAGGAATC+GGG - chr7_1:66511658-66511677 None:intergenic 35.0%
GAGTTTGAGGATTAAGGAAT+CGG - chr7_1:66511659-66511678 None:intergenic 35.0%
! TGGATTTGATTGGTTCTTGA+TGG - chr7_1:66511840-66511859 None:intergenic 35.0%
GTAACCCATTGAAAAAGAAG+CGG - chr7_1:66511946-66511965 None:intergenic 35.0%
AGTAGACAATTGAGGAAGTA+GGG - chr7_1:66512040-66512059 None:intergenic 35.0%
GAATGAAGAGTAGACAATTG+AGG - chr7_1:66512048-66512067 None:intergenic 35.0%
GAAATTGATACTTGCAGCAA+GGG - chr7_1:66512127-66512146 None:intergenic 35.0%
! TGAACCATAATTTTCACTGC+TGG - chr7_1:66512191-66512210 None:intergenic 35.0%
AATTGAACTTAGTGCCTGTT+TGG + chr7_1:66512267-66512286 Msa1031790:intron 35.0%
ATCATTCATAAGCTTGCCTA+AGG + chr7_1:66512355-66512374 Msa1031790:intron 35.0%
TAAACTACCTTGGTAAGCTT+AGG - chr7_1:66512519-66512538 None:intergenic 35.0%
CAAACAGTTTCACAAAACCT+AGG - chr7_1:66512675-66512694 None:intergenic 35.0%
!! CTAGGTTTTGTGAAACTGTT+TGG + chr7_1:66512673-66512692 Msa1031790:intron 35.0%
AAATTGACCCTCAGTTTGTA+GGG + chr7_1:66512908-66512927 Msa1031790:intron 35.0%
AACTGTCTTTAAACAGATGC+AGG + chr7_1:66512996-66513015 Msa1031790:intron 35.0%
! CTAAACACATACTCTAAGAG+GGG - chr7_1:66513027-66513046 None:intergenic 35.0%
TGTGTTTAGTTAGAGGGTAA+TGG + chr7_1:66513038-66513057 Msa1031790:intron 35.0%
!! TTTAGTTAGAGGGTAATGGA+TGG + chr7_1:66513042-66513061 Msa1031790:intron 35.0%
!! TTAGTTAGAGGGTAATGGAT+GGG + chr7_1:66513043-66513062 Msa1031790:intron 35.0%
!! GTTTGGTTCAATTTTTGGAC+TGG + chr7_1:66513104-66513123 Msa1031790:intron 35.0%
AGGCAAATTGTTGACATTGT+TGG + chr7_1:66513325-66513344 Msa1031790:CDS 35.0%
CAACAAACTCAATAGCCAAA+TGG - chr7_1:66513399-66513418 None:intergenic 35.0%
TGAATTGCTGCCAACTTATT+TGG + chr7_1:66513660-66513679 Msa1031790:CDS 35.0%
CACTTATGAAAGAAGAACAC+TGG - chr7_1:66513778-66513797 None:intergenic 35.0%
!! ACCATAATCTTTGATGATGC+AGG + chr7_1:66513975-66513994 Msa1031790:intron 35.0%
ACCTGCATCATCAAAGATTA+TGG - chr7_1:66513979-66513998 None:intergenic 35.0%
TGATATTTATCCTGCAAGTC+TGG - chr7_1:66514120-66514139 None:intergenic 35.0%
! TTTTCAAAATCCTCGAGTAC+AGG + chr7_1:66514179-66514198 Msa1031790:CDS 35.0%
ACATTAATGAGAACATGGAG+TGG - chr7_1:66514301-66514320 None:intergenic 35.0%
ATTTATCATGTGTTACCCCA+TGG + chr7_1:66514468-66514487 Msa1031790:intron 35.0%
TACTCTCGAGTCAAAATGTT+TGG - chr7_1:66514591-66514610 None:intergenic 35.0%
!! TCGAGAGTATTAAATTGGCT+GGG + chr7_1:66514602-66514621 Msa1031790:intron 35.0%
CAAATGAGATATCAAAGACC+GGG - chr7_1:66514819-66514838 None:intergenic 35.0%
AATGGCAAACAAATACCTGA+AGG - chr7_1:66514990-66515009 None:intergenic 35.0%
!! GAAATCGAGATGGATTATCA+AGG - chr7_1:66515087-66515106 None:intergenic 35.0%
! TCCATCTCGATTTCGTTTTA+AGG + chr7_1:66515093-66515112 Msa1031790:intron 35.0%
TCCTTAAAACGAAATCGAGA+TGG - chr7_1:66515097-66515116 None:intergenic 35.0%
!!! TTGTTTTGGTCTCCATTTAC+TGG + chr7_1:66515146-66515165 Msa1031790:intron 35.0%
!!! TGTTTTGGTCTCCATTTACT+GGG + chr7_1:66515147-66515166 Msa1031790:intron 35.0%
!! TTTTGGTTAGCTGAAGCTTT+AGG + chr7_1:66515211-66515230 Msa1031790:intron 35.0%
! TGATCGTATGAGTATTGTTG+TGG + chr7_1:66515262-66515281 Msa1031790:intron 35.0%
ATTATAGAGTGGAAAGCAGA+TGG + chr7_1:66515421-66515440 Msa1031790:intron 35.0%
ACTAATACACTCCATTGCTT+TGG - chr7_1:66515707-66515726 None:intergenic 35.0%
AGCAATGGAGTGTATTAGTT+TGG + chr7_1:66515708-66515727 Msa1031790:CDS 35.0%
! ATGGAGTGTATTAGTTTGGT+AGG + chr7_1:66515712-66515731 Msa1031790:CDS 35.0%
! GTGTATTAGTTTGGTAGGTA+TGG + chr7_1:66515717-66515736 Msa1031790:CDS 35.0%
TGTTGGAAAAGAGAAGTTCA+GGG + chr7_1:66515741-66515760 Msa1031790:CDS 35.0%
TACTTGTAACATGTAACTCG+CGG - chr7_1:66515991-66516010 None:intergenic 35.0%
CGAGTTACATGTTACAAGTA+TGG + chr7_1:66515991-66516010 Msa1031790:intron 35.0%
!! CCAAAGTTGATACCAACAAA+CGG - chr7_1:66516033-66516052 None:intergenic 35.0%
ATACAGTAACTGGGACTAAA+AGG - chr7_1:66516291-66516310 None:intergenic 35.0%
! TAGTCCCAGTTACTGTATTT+TGG + chr7_1:66516293-66516312 Msa1031790:intron 35.0%
! AGTCCCAGTTACTGTATTTT+GGG + chr7_1:66516294-66516313 Msa1031790:intron 35.0%
GTTATCATGTGATGTGTTTC+TGG + chr7_1:66516336-66516355 Msa1031790:intron 35.0%
!!! ACTTGCTTTTTGACTACTTG+TGG + chr7_1:66516627-66516646 Msa1031790:intron 35.0%
! AGCATTGAAACCATTACTCT+CGG + chr7_1:66516668-66516687 Msa1031790:intron 35.0%
AATAGAAAACAATGCCAACC+TGG - chr7_1:66516805-66516824 None:intergenic 35.0%
! AAATAGAAGCAAGGTTCTGA+CGG - chr7_1:66516972-66516991 None:intergenic 35.0%
ACTGTTGTCTTCAGCAAAAT+CGG + chr7_1:66517061-66517080 Msa1031790:CDS 35.0%
TGTAAAGCTTCCACCAAATT+TGG - chr7_1:66517155-66517174 None:intergenic 35.0%
!!! TGCTGCCTATTCTGATTTTT+TGG + chr7_1:66517186-66517205 Msa1031790:intron 35.0%
! ATGTATTTTACCTGTCTTCC+AGG + chr7_1:66517240-66517259 Msa1031790:intron 35.0%
AGAAATTTGTGCAAGCATGT+TGG + chr7_1:66517273-66517292 Msa1031790:CDS 35.0%
GAAATTTGTGCAAGCATGTT+GGG + chr7_1:66517274-66517293 Msa1031790:CDS 35.0%
!! TATGGAACTGTTTCTGCAAT+AGG + chr7_1:66517521-66517540 Msa1031790:intron 35.0%
AACAAGGGAAAGTTATAAGG+AGG - chr7_1:66517564-66517583 None:intergenic 35.0%
GTCAACAAGGGAAAGTTATA+AGG - chr7_1:66517567-66517586 None:intergenic 35.0%
TCTTATCCATTCAGATGCAT+GGG - chr7_1:66517601-66517620 None:intergenic 35.0%
ATCTTATCCATTCAGATGCA+TGG - chr7_1:66517602-66517621 None:intergenic 35.0%
GATCTTATCCATTGTCATCT+AGG - chr7_1:66517764-66517783 None:intergenic 35.0%
TGTAGGCTATAGAACAATCA+AGG + chr7_1:66517912-66517931 Msa1031790:intron 35.0%
GAGTGATATATATGGCAGAA+TGG - chr7_1:66517966-66517985 None:intergenic 35.0%
AGCTAGTGGTTATTTATCTC+AGG + chr7_1:66518101-66518120 Msa1031790:intron 35.0%
GGTTATTTATCTCAGGTATC+AGG + chr7_1:66518108-66518127 Msa1031790:intron 35.0%
!! ACTTGCTTTTCATCTAGATG+TGG - chr7_1:66518135-66518154 None:intergenic 35.0%
TGAAGAAAGAGAACTACTCA+AGG + chr7_1:66518251-66518270 Msa1031790:CDS 35.0%
ATCCAACTCTTCTCATTAAC+TGG + chr7_1:66518331-66518350 Msa1031790:intron 35.0%
ATCCAGTTAATGAGAAGAGT+TGG - chr7_1:66518336-66518355 None:intergenic 35.0%
AAAGATTCGACATAAGAGCT+AGG - chr7_1:66518376-66518395 None:intergenic 35.0%
GAAAGGGAACTTACAAACAT+AGG - chr7_1:66518494-66518513 None:intergenic 35.0%
AAAAAGAAGACACAGCAAGA+CGG - chr7_1:66518521-66518540 None:intergenic 35.0%
AAGAAGAAAAAGCTATGTGG+TGG - chr7_1:66518608-66518627 None:intergenic 35.0%
CATTCACAAATCATAAGAGG+GGG - chr7_1:66518989-66519008 None:intergenic 35.0%
CGTCATTCACAAATCATAAG+AGG - chr7_1:66518992-66519011 None:intergenic 35.0%
!!! GAAGAGCTTTTTTCTTGTGA+GGG - chr7_1:66519214-66519233 None:intergenic 35.0%
CCCGAAGAATAAAAGAAAGA+CGG - chr7_1:66519236-66519255 None:intergenic 35.0%
! CCGTCTTTCTTTTATTCTTC+GGG + chr7_1:66519233-66519252 Msa1031790:intron 35.0%
ACAATGGTATAAGAACACCA+TGG - chr7_1:66519713-66519732 None:intergenic 35.0%
TTATCAGAATGCTGTGCATT+GGG - chr7_1:66519805-66519824 None:intergenic 35.0%
ATTATCAGAATGCTGTGCAT+TGG - chr7_1:66519806-66519825 None:intergenic 35.0%
AGTGTAATATTGGCAAAAGC+TGG - chr7_1:66520086-66520105 None:intergenic 35.0%
AGTCATGAAGCTGAAAACTA+CGG + chr7_1:66520118-66520137 Msa1031790:intron 35.0%
GACATCATTAAGTTTGCATC+TGG - chr7_1:66520177-66520196 None:intergenic 35.0%
! AAGAAGGCACATTGAAGTTA+GGG - chr7_1:66520349-66520368 None:intergenic 35.0%
! TAAGAAGGCACATTGAAGTT+AGG - chr7_1:66520350-66520369 None:intergenic 35.0%
!! ACCTAAATCCCTTAGTCTTA+GGG - chr7_1:66520424-66520443 None:intergenic 35.0%
! CTTTTCTGCTTAGTAAAGAG+AGG + chr7_1:66520534-66520553 Msa1031790:intron 35.0%
GTTAAAAGTGGACACAGTTA+AGG + chr7_1:66520556-66520575 Msa1031790:intron 35.0%
!!! TGACTGCATAAACTGGTTTT+CGG + chr7_1:66520626-66520645 Msa1031790:intron 35.0%
TCACGAATGTGCAAGAAATT+GGG - chr7_1:66520659-66520678 None:intergenic 35.0%
ATCACGAATGTGCAAGAAAT+TGG - chr7_1:66520660-66520679 None:intergenic 35.0%
CTAAGTTGCTTGCCTATAAA+AGG + chr7_1:66520782-66520801 Msa1031790:CDS 35.0%
!! TAAAAACTGGCTTTGGTCAA+AGG - chr7_1:66521040-66521059 None:intergenic 35.0%
TGATGTAGATATTATGTGCG+GGG + chr7_1:66521129-66521148 Msa1031790:intron 35.0%
CTTGATTGCTGAACCATATT+TGG + chr7_1:66521463-66521482 Msa1031790:three_prime_UTR 35.0%
! TGGTTGGTTAGATTGAGAAA+TGG + chr7_1:66521542-66521561 Msa1031790:three_prime_UTR 35.0%
ACTGTATCAAGCATGACTAA+AGG - chr7_1:66521677-66521696 None:intergenic 35.0%
!!! CGTTTTGAAATATCCGCAAA+TGG - chr7_1:66521858-66521877 None:intergenic 35.0%
!! TGCTTTTGCTTTTGAATGGC+GGG - chr7_1:66511351-66511370 None:intergenic 40.0%
TCTCTGCTGCTCGAAAATAA+GGG - chr7_1:66511377-66511396 None:intergenic 40.0%
!! GCACAAATGGCTCTAATTCT+AGG + chr7_1:66511526-66511545 Msa1031790:CDS 40.0%
!! AATGGCTCTAATTCTAGGAC+CGG + chr7_1:66511531-66511550 Msa1031790:CDS 40.0%
TGTGATTAGGGATTCGAAGT+GGG - chr7_1:66511563-66511582 None:intergenic 40.0%
TTGTGATTAGGGATTCGAAG+TGG - chr7_1:66511564-66511583 None:intergenic 40.0%
GGACATGAGGTTTGTGATTA+GGG - chr7_1:66511575-66511594 None:intergenic 40.0%
TGGACATGAGGTTTGTGATT+AGG - chr7_1:66511576-66511595 None:intergenic 40.0%
! GATTGAAGAGATTTTCGGCT+TGG - chr7_1:66511618-66511637 None:intergenic 40.0%
GTGAGAGAGTTTGAGGATTA+AGG - chr7_1:66511665-66511684 None:intergenic 40.0%
GAGATGAGAGAAGAAGAGAA+CGG - chr7_1:66511816-66511835 None:intergenic 40.0%
!!! TGCTTCCGCTTCTTTTTCAA+TGG + chr7_1:66511938-66511957 Msa1031790:CDS 40.0%
!!! GCTTCCGCTTCTTTTTCAAT+GGG + chr7_1:66511939-66511958 Msa1031790:CDS 40.0%
GAGTAGACAATTGAGGAAGT+AGG - chr7_1:66512041-66512060 None:intergenic 40.0%
CGAAATTGATACTTGCAGCA+AGG - chr7_1:66512128-66512147 None:intergenic 40.0%
TAAGCTTGCCTAAGGAGTTA+TGG + chr7_1:66512363-66512382 Msa1031790:intron 40.0%
GACTCTAAGTCAATCCAAAC+AGG - chr7_1:66512438-66512457 None:intergenic 40.0%
GTGAGCTTATCTTATGACCT+AGG + chr7_1:66512655-66512674 Msa1031790:intron 40.0%
CTACAAACTGAGGGTCAATT+TGG - chr7_1:66512909-66512928 None:intergenic 40.0%
CAAATTGACCCTCAGTTTGT+AGG + chr7_1:66512907-66512926 Msa1031790:intron 40.0%
ATCTGAACCCTACAAACTGA+GGG - chr7_1:66512918-66512937 None:intergenic 40.0%
AGTCAATGTCTGCATCATGA+GGG - chr7_1:66513215-66513234 None:intergenic 40.0%
!! TTGACTGAGGCATTGAATTC+TGG + chr7_1:66513229-66513248 Msa1031790:CDS 40.0%
! AACTTCTCATTGAGCTTGCT+GGG + chr7_1:66513281-66513300 Msa1031790:CDS 40.0%
TTCTTCTAATGACTCAGCCT+CGG - chr7_1:66513368-66513387 None:intergenic 40.0%
AGGCTGAGTCATTAGAAGAA+GGG + chr7_1:66513368-66513387 Msa1031790:CDS 40.0%
ATATTGAGGATGATCCTGCT+TGG + chr7_1:66513518-66513537 Msa1031790:CDS 40.0%
GAGACTAGTAACTACGGATT+TGG + chr7_1:66513574-66513593 Msa1031790:CDS 40.0%
! TAGTAACTACGGATTTGGTC+AGG + chr7_1:66513579-66513598 Msa1031790:CDS 40.0%
! AGACTTTCAATTGCTTTGGG+CGG + chr7_1:66513613-66513632 Msa1031790:CDS 40.0%
!! ATGGTGTTTTTGCCATTCAG+GGG - chr7_1:66513689-66513708 None:intergenic 40.0%
!! CATGGTGTTTTTGCCATTCA+GGG - chr7_1:66513690-66513709 None:intergenic 40.0%
AATTGCAGAGGGTTGTTCAA+AGG + chr7_1:66513732-66513751 Msa1031790:CDS 40.0%
CCTCTCTTTAGTCTGCAATA+CGG + chr7_1:66513894-66513913 Msa1031790:intron 40.0%
CTCTCTTTAGTCTGCAATAC+GGG + chr7_1:66513895-66513914 Msa1031790:intron 40.0%
TGCAATACGGGTGACTATTT+GGG + chr7_1:66513907-66513926 Msa1031790:intron 40.0%
!! GTGACTATTTGGGGTTAGTT+AGG + chr7_1:66513917-66513936 Msa1031790:intron 40.0%
!! ACTATTTGGGGTTAGTTAGG+TGG + chr7_1:66513920-66513939 Msa1031790:intron 40.0%
GCAGGTGATGACAAAGAATT+TGG + chr7_1:66513993-66514012 Msa1031790:intron 40.0%
ATATCACCACTTAGTGCTTC+CGG + chr7_1:66514134-66514153 Msa1031790:CDS 40.0%
! TGTTACCCCATGGATTGTAT+AGG + chr7_1:66514478-66514497 Msa1031790:intron 40.0%
!! CTCGAGAGTATTAAATTGGC+TGG + chr7_1:66514601-66514620 Msa1031790:intron 40.0%
! AATTGGCTGGGCTAACTTTT+TGG + chr7_1:66514614-66514633 Msa1031790:intron 40.0%
CTCACAATCCCATCCAAATA+AGG - chr7_1:66514952-66514971 None:intergenic 40.0%
CAAACTTCTTGTACTCCTTC+AGG + chr7_1:66514972-66514991 Msa1031790:CDS 40.0%
!! GTTTTGGTCTCCATTTACTG+GGG + chr7_1:66515148-66515167 Msa1031790:intron 40.0%
! TTTTGGTCTCCATTTACTGG+GGG + chr7_1:66515149-66515168 Msa1031790:intron 40.0%
CTGTTGGAAAAGAGAAGTTC+AGG + chr7_1:66515740-66515759 Msa1031790:CDS 40.0%
GTTGATACCAACAAACGGAA+AGG - chr7_1:66516028-66516047 None:intergenic 40.0%
! CCGTTTGTTGGTATCAACTT+TGG + chr7_1:66516030-66516049 Msa1031790:intron 40.0%
! AGCTTTTATGTTATCAGGCG+TGG + chr7_1:66516115-66516134 Msa1031790:intron 40.0%
! GCTTTTATGTTATCAGGCGT+GGG + chr7_1:66516116-66516135 Msa1031790:intron 40.0%
GCATGACAAAACCCATGTAT+GGG - chr7_1:66516176-66516195 None:intergenic 40.0%
! GCAGCTCACATTTTCTCAAA+TGG - chr7_1:66516451-66516470 None:intergenic 40.0%
!! CTTTTTGACTACTTGTGGTC+TGG + chr7_1:66516632-66516651 Msa1031790:intron 40.0%
GCATTGAAACCATTACTCTC+GGG + chr7_1:66516669-66516688 Msa1031790:intron 40.0%
CATTGAAACCATTACTCTCG+GGG + chr7_1:66516670-66516689 Msa1031790:CDS 40.0%
! TCTTTTATCCCCGAGAGTAA+TGG - chr7_1:66516681-66516700 None:intergenic 40.0%
ACTCTCGGGGATAAAAGAAT+AGG + chr7_1:66516683-66516702 Msa1031790:CDS 40.0%
!!! TGAAGGAAGGCTTTTTTCCT+TGG + chr7_1:66516774-66516793 Msa1031790:CDS 40.0%
!!! CTTTTTTCCTTGGATTGACC+AGG + chr7_1:66516784-66516803 Msa1031790:CDS 40.0%
CATATAGGTTGCTTCCACAT+TGG + chr7_1:66516879-66516898 Msa1031790:intron 40.0%
TTTAAGGAGAGGAACCAATG+TGG - chr7_1:66516896-66516915 None:intergenic 40.0%
CTTCCATGAAGAAGTTAGGA+AGG + chr7_1:66516921-66516940 Msa1031790:CDS 40.0%
TAGCTGTTAACAAAGCAGGT+AGG - chr7_1:66517034-66517053 None:intergenic 40.0%
TTTGCTGAAGACAACAGTTC+TGG - chr7_1:66517059-66517078 None:intergenic 40.0%
AGCAAAATCGGCTATAGAGA+AGG + chr7_1:66517073-66517092 Msa1031790:CDS 40.0%
GCAAAATCGGCTATAGAGAA+GGG + chr7_1:66517074-66517093 Msa1031790:CDS 40.0%
CAAAATCGGCTATAGAGAAG+GGG + chr7_1:66517075-66517094 Msa1031790:CDS 40.0%
!! GTTTTAGGTATGTTGCGTCA+CGG - chr7_1:66517112-66517131 None:intergenic 40.0%
TTTGGTGGAAGCTTTACACA+AGG + chr7_1:66517157-66517176 Msa1031790:CDS 40.0%
CTTGCACAAATTTCTACCTC+TGG - chr7_1:66517268-66517287 None:intergenic 40.0%
TTTCCCTTGTTGACACAACT+TGG + chr7_1:66517573-66517592 Msa1031790:intron 40.0%
CTTATCCATTCAGATGCATG+GGG - chr7_1:66517600-66517619 None:intergenic 40.0%
GAGTGTGAATCATGTAAGCT+CGG - chr7_1:66517684-66517703 None:intergenic 40.0%
TTGGATGACCTAGATGACAA+TGG + chr7_1:66517753-66517772 Msa1031790:intron 40.0%
ACATCCTATATTCCTTGCAC+AGG - chr7_1:66517800-66517819 None:intergenic 40.0%
!! AAAGCAAGTAAGGAGCATTG+TGG + chr7_1:66518146-66518165 Msa1031790:CDS 40.0%
TTCATGCTTTCTGGATGAAC+TGG - chr7_1:66518196-66518215 None:intergenic 40.0%
AGCATCAAAGTCCTCTTCTT+TGG - chr7_1:66518232-66518251 None:intergenic 40.0%
GACGAAAGCTCTTCAAAGAA+AGG - chr7_1:66518461-66518480 None:intergenic 40.0%
AAAAGAAGACACAGCAAGAC+GGG - chr7_1:66518520-66518539 None:intergenic 40.0%
AAGACAAAACCTCAGAGGAA+AGG + chr7_1:66519114-66519133 Msa1031790:CDS 40.0%
!!! GCTTTTTTCTTGTGAGGGAA+GGG - chr7_1:66519209-66519228 None:intergenic 40.0%
!!! AGCTTTTTTCTTGTGAGGGA+AGG - chr7_1:66519210-66519229 None:intergenic 40.0%
!!! GGAAGAGCTTTTTTCTTGTG+AGG - chr7_1:66519215-66519234 None:intergenic 40.0%
TTGCAAGCTTCAAGCAAGAA+TGG - chr7_1:66519353-66519372 None:intergenic 40.0%
GAAAACAGATCCACCAAACT+CGG - chr7_1:66519533-66519552 None:intergenic 40.0%
! TCTGTTTTCAAACCCCTTGT+TGG + chr7_1:66519544-66519563 Msa1031790:CDS 40.0%
!! GATAATGCTGTTTCAGCTCT+TGG + chr7_1:66519838-66519857 Msa1031790:CDS 40.0%
GTGCTGCATTTATGCTATCA+CGG - chr7_1:66519882-66519901 None:intergenic 40.0%
TGATAGCATAAATGCAGCAC+AGG + chr7_1:66519882-66519901 Msa1031790:CDS 40.0%
!! ACGAACTAGTCTTGGCAATA+TGG + chr7_1:66520047-66520066 Msa1031790:intron 40.0%
!! AACTAGTCTTGGCAATATGG+AGG + chr7_1:66520050-66520069 Msa1031790:intron 40.0%
!! ACTAGTCTTGGCAATATGGA+GGG + chr7_1:66520051-66520070 Msa1031790:intron 40.0%
! GTTTTCAGCTTCATGACTCA+AGG - chr7_1:66520116-66520135 None:intergenic 40.0%
TCATTAAGTTTGCATCTGGG+TGG - chr7_1:66520173-66520192 None:intergenic 40.0%
TCCCTAAGACTAAGGGATTT+AGG + chr7_1:66520420-66520439 Msa1031790:intron 40.0%
! CACCTAAATCCCTTAGTCTT+AGG - chr7_1:66520425-66520444 None:intergenic 40.0%
AGGTGATTTAATCGAGGCTA+AGG + chr7_1:66520802-66520821 Msa1031790:CDS 40.0%
GCATGACCTTCTTTGTTCAA+TGG + chr7_1:66520829-66520848 Msa1031790:CDS 40.0%
GGAAGTAGAGATAGCAAGTT+AGG - chr7_1:66520905-66520924 None:intergenic 40.0%
GGCAAAAATTGCAACGATCT+TGG - chr7_1:66521008-66521027 None:intergenic 40.0%
TTTGGTCAAAGGTTGTACCT+CGG - chr7_1:66521029-66521048 None:intergenic 40.0%
CAACTGAACAAACTGTGAGT+CGG + chr7_1:66521162-66521181 Msa1031790:CDS 40.0%
! GAAGTGCAAGTTGTTGTTGA+GGG - chr7_1:66521262-66521281 None:intergenic 40.0%
! TGAAGTGCAAGTTGTTGTTG+AGG - chr7_1:66521263-66521282 None:intergenic 40.0%
CACAGCAGCTTCTTTACAAA+GGG - chr7_1:66521373-66521392 None:intergenic 40.0%
ACACAGCAGCTTCTTTACAA+AGG - chr7_1:66521374-66521393 None:intergenic 40.0%
GCAATCAAGAAACACAAACC+AGG - chr7_1:66521452-66521471 None:intergenic 40.0%
! CAAGTCAAGCAGTTGATACT+TGG - chr7_1:66521493-66521512 None:intergenic 40.0%
!! TATCAACTGCTTGACTTGTG+TGG + chr7_1:66521495-66521514 Msa1031790:three_prime_UTR 40.0%
! ATATGTCCGTGCTCTTTTTC+TGG + chr7_1:66521793-66521812 Msa1031790:three_prime_UTR 40.0%
CGAAAACCAGAAAAAGAGCA+CGG - chr7_1:66521802-66521821 None:intergenic 40.0%
GAAATATCCGCAAATGGCTT+GGG - chr7_1:66521852-66521871 None:intergenic 40.0%
TGAAATATCCGCAAATGGCT+TGG - chr7_1:66521853-66521872 None:intergenic 40.0%
!! GCTTTTGCTTTTGAATGGCG+GGG - chr7_1:66511350-66511369 None:intergenic 45.0%
CTCTCTGCTGCTCGAAAATA+AGG - chr7_1:66511378-66511397 None:intergenic 45.0%
AGAGAGAGAGAGAGAGGAAA+GGG - chr7_1:66511421-66511440 None:intergenic 45.0%
CGATCAAAACCAGGCACAAA+TGG + chr7_1:66511513-66511532 Msa1031790:CDS 45.0%
GAATTAGAGCCATTTGTGCC+TGG - chr7_1:66511525-66511544 None:intergenic 45.0%
!! GATTCGAAGTGGGTTGAATC+CGG - chr7_1:66511553-66511572 None:intergenic 45.0%
GAGGATTAAGGAATCGGGAT+AGG - chr7_1:66511653-66511672 None:intergenic 45.0%
GATAGATGAAAGAGTCGTCG+TGG - chr7_1:66511762-66511781 None:intergenic 45.0%
!! GAGAGTGGATTGAGTTGAAG+GGG - chr7_1:66511794-66511813 None:intergenic 45.0%
!! GGAGAGTGGATTGAGTTGAA+GGG - chr7_1:66511795-66511814 None:intergenic 45.0%
GTCGCATAGCTTCTTAACGA+TGG - chr7_1:66511860-66511879 None:intergenic 45.0%
AAAAGAAGCGGAAGCAAGTC+AGG - chr7_1:66511934-66511953 None:intergenic 45.0%
GGGTTACTTCCAATGATGCT+AGG + chr7_1:66511959-66511978 Msa1031790:CDS 45.0%
TTCCAATGATGCTAGGCTTC+AGG + chr7_1:66511966-66511985 Msa1031790:CDS 45.0%
GCGCAATTGGCGCATTATAT+TGG + chr7_1:66512009-66512028 Msa1031790:CDS 45.0%
! TAGTGCTGCTACTTCCTCTT+CGG + chr7_1:66512086-66512105 Msa1031790:CDS 45.0%
ATTGATACTTGCAGCAAGGG+CGG - chr7_1:66512124-66512143 None:intergenic 45.0%
! ACTGCTGGTTATACCTGTCA+CGG - chr7_1:66512176-66512195 None:intergenic 45.0%
! TGCCTGTTTGGATTGACTCA+GGG + chr7_1:66512279-66512298 Msa1031790:intron 45.0%
AATTGAACTCAGGGCCTGTT+TGG + chr7_1:66512421-66512440 Msa1031790:intron 45.0%
ACATAAGGGCTCGTTTGGAT+TGG - chr7_1:66512637-66512656 None:intergenic 45.0%
CATCTGAACCCTACAAACTG+AGG - chr7_1:66512919-66512938 None:intergenic 45.0%
!! TTAGAGGGTAATGGATGGGA+AGG + chr7_1:66513047-66513066 Msa1031790:intron 45.0%
!! TAGAGGGTAATGGATGGGAA+GGG + chr7_1:66513048-66513067 Msa1031790:intron 45.0%
GTCAATGTCTGCATCATGAG+GGG - chr7_1:66513214-66513233 None:intergenic 45.0%
CAGTCAATGTCTGCATCATG+AGG - chr7_1:66513216-66513235 None:intergenic 45.0%
! CATGATGCAGACATTGACTG+AGG + chr7_1:66513216-66513235 Msa1031790:CDS 45.0%
! GGCATTGAATTCTGGTCAAG+AGG + chr7_1:66513237-66513256 Msa1031790:CDS 45.0%
GAACTTCTCATTGAGCTTGC+TGG + chr7_1:66513280-66513299 Msa1031790:CDS 45.0%
GAGGCTGAGTCATTAGAAGA+AGG + chr7_1:66513367-66513386 Msa1031790:CDS 45.0%
!! GTTTGTTGTTACACTTGCCG+AGG + chr7_1:66513411-66513430 Msa1031790:CDS 45.0%
GCTGGTGAGACTAGTAACTA+CGG + chr7_1:66513568-66513587 Msa1031790:CDS 45.0%
! GACTTTCAATTGCTTTGGGC+GGG + chr7_1:66513614-66513633 Msa1031790:CDS 45.0%
!! GCATGGTGTTTTTGCCATTC+AGG - chr7_1:66513691-66513710 None:intergenic 45.0%
TGCACTTGCACAAATTGCAG+AGG + chr7_1:66513720-66513739 Msa1031790:CDS 45.0%
GCACTTGCACAAATTGCAGA+GGG + chr7_1:66513721-66513740 Msa1031790:CDS 45.0%
CCGTATTGCAGACTAAAGAG+AGG - chr7_1:66513897-66513916 None:intergenic 45.0%
CTGCAATACGGGTGACTATT+TGG + chr7_1:66513906-66513925 Msa1031790:intron 45.0%
GCAATACGGGTGACTATTTG+GGG + chr7_1:66513908-66513927 Msa1031790:intron 45.0%
CATTTCCTGATCCAAACCCT+CGG + chr7_1:66514043-66514062 Msa1031790:CDS 45.0%
ATTTCCTGATCCAAACCCTC+GGG + chr7_1:66514044-66514063 Msa1031790:CDS 45.0%
TGGGCGGCTATAAATGCAAT+TGG + chr7_1:66514072-66514091 Msa1031790:CDS 45.0%
GGGCGGCTATAAATGCAATT+GGG + chr7_1:66514073-66514092 Msa1031790:CDS 45.0%
TGGGCAATTGTCCACAGATT+TGG + chr7_1:66514092-66514111 Msa1031790:CDS 45.0%
GGGCAATTGTCCACAGATTT+GGG + chr7_1:66514093-66514112 Msa1031790:CDS 45.0%
GGCAATTGTCCACAGATTTG+GGG + chr7_1:66514094-66514113 Msa1031790:CDS 45.0%
AAAGTGCAAACCTGTACTCG+AGG - chr7_1:66514192-66514211 None:intergenic 45.0%
AATGCAGATCCCCCAGTAAA+TGG - chr7_1:66515161-66515180 None:intergenic 45.0%
TGGAAAGCAGATGGTTCAAG+AGG + chr7_1:66515430-66515449 Msa1031790:CDS 45.0%
GGAAAGCAGATGGTTCAAGA+GGG + chr7_1:66515431-66515450 Msa1031790:CDS 45.0%
!! ATCAGTCGCTGATTCTTCAC+AGG + chr7_1:66515472-66515491 Msa1031790:CDS 45.0%
TATGCTTCGTGCCAAAGCAA+TGG + chr7_1:66515693-66515712 Msa1031790:CDS 45.0%
AGTTTGGTAGGTATGGCTGT+TGG + chr7_1:66515724-66515743 Msa1031790:CDS 45.0%
GTCACTGCAACAATCTCAAC+TGG + chr7_1:66515950-66515969 Msa1031790:CDS 45.0%
TGTAACATGTAACTCGCGGT+TGG - chr7_1:66515987-66516006 None:intergenic 45.0%
TGACAAAACCCATGTATGGG+AGG - chr7_1:66516173-66516192 None:intergenic 45.0%
GGCATGACAAAACCCATGTA+TGG - chr7_1:66516177-66516196 None:intergenic 45.0%
GCTGATGTAATTGACACGTC+AGG - chr7_1:66516228-66516247 None:intergenic 45.0%
AGGCATTAAGACCAGTGTCT+TGG + chr7_1:66516703-66516722 Msa1031790:CDS 45.0%
CATTAAGACCAGTGTCTTGG+AGG + chr7_1:66516706-66516725 Msa1031790:CDS 45.0%
! TTGCTACGCTGATGAGTTGA+AGG + chr7_1:66516757-66516776 Msa1031790:CDS 45.0%
! TACGCTGATGAGTTGAAGGA+AGG + chr7_1:66516761-66516780 Msa1031790:CDS 45.0%
TTTCCTTGGATTGACCAGGT+TGG + chr7_1:66516788-66516807 Msa1031790:intron 45.0%
CTGCCTTCCTAACTTCTTCA+TGG - chr7_1:66516927-66516946 None:intergenic 45.0%
GGCATAGCTGTTAACAAAGC+AGG - chr7_1:66517038-66517057 None:intergenic 45.0%
! AAATTTCTACCTCTGGCTCC+TGG - chr7_1:66517261-66517280 None:intergenic 45.0%
CGCACTGAATGAATGCATAC+AGG + chr7_1:66517297-66517316 Msa1031790:CDS 45.0%
!! ACTGTTTCTGCAATAGGACG+AGG + chr7_1:66517527-66517546 Msa1031790:intron 45.0%
GGTCCAAGTTGTGTCAACAA+GGG - chr7_1:66517579-66517598 None:intergenic 45.0%
GCTTTGCTAGTTGCAGCATT+TGG - chr7_1:66517706-66517725 None:intergenic 45.0%
! GAGATTTTGTAGCCTGTGCA+AGG + chr7_1:66517785-66517804 Msa1031790:intron 45.0%
GTAGCCTGTGCAAGGAATAT+AGG + chr7_1:66517793-66517812 Msa1031790:intron 45.0%
CTCTGCTCTTTCATGCTTTC+TGG - chr7_1:66518205-66518224 None:intergenic 45.0%
TGCTAGATTGGCGATTGCTT+GGG + chr7_1:66518401-66518420 Msa1031790:intron 45.0%
! CTGTGTCTTCTTTTTGCTGC+TGG + chr7_1:66518526-66518545 Msa1031790:intron 45.0%
AAAAGCTATGTGGTGGCAGA+GGG - chr7_1:66518601-66518620 None:intergenic 45.0%
AAAAAGCTATGTGGTGGCAG+AGG - chr7_1:66518602-66518621 None:intergenic 45.0%
TCACAAATCATAAGAGGGGG+CGG - chr7_1:66518986-66519005 None:intergenic 45.0%
GGGTAAAGACAAAACCTCAG+AGG + chr7_1:66519109-66519128 Msa1031790:intron 45.0%
CTTACTTATGAGCTGCTTCG+CGG - chr7_1:66519181-66519200 None:intergenic 45.0%
TGAGTGTTCAGATGTTCGAC+AGG + chr7_1:66519376-66519395 Msa1031790:CDS 45.0%
TCTTCTCAGGCAGCTGTTTA+TGG + chr7_1:66519493-66519512 Msa1031790:intron 45.0%
CTTCTCAGGCAGCTGTTTAT+GGG + chr7_1:66519494-66519513 Msa1031790:intron 45.0%
TTCTCAGGCAGCTGTTTATG+GGG + chr7_1:66519495-66519514 Msa1031790:intron 45.0%
! GTTTTCAAACCCCTTGTTGG+AGG + chr7_1:66519547-66519566 Msa1031790:CDS 45.0%
AGTAACTGACCTCCAACAAG+GGG - chr7_1:66519559-66519578 None:intergenic 45.0%
GAGTAACTGACCTCCAACAA+GGG - chr7_1:66519560-66519579 None:intergenic 45.0%
TGAGTAACTGACCTCCAACA+AGG - chr7_1:66519561-66519580 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr7_1:66519643-66519662 Msa1031790:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr7_1:66519644-66519663 Msa1031790:intron 45.0%
!! CTTCTACAGAGGCACTTTCA+AGG + chr7_1:66519758-66519777 Msa1031790:intron 45.0%
TTATGCTATCACGGTGGAAC+TGG - chr7_1:66519873-66519892 None:intergenic 45.0%
CTGCATTTATGCTATCACGG+TGG - chr7_1:66519879-66519898 None:intergenic 45.0%
CATATCACTCGAACAAGTGC+AGG + chr7_1:66519947-66519966 Msa1031790:intron 45.0%
! TCATGGCTACGAACTAGTCT+TGG + chr7_1:66520039-66520058 Msa1031790:intron 45.0%
ACATCAAAACACACACGCAC+AGG - chr7_1:66520717-66520736 None:intergenic 45.0%
TATAGGCAAGCAACTTAGCC+AGG - chr7_1:66520780-66520799 None:intergenic 45.0%
! GATCGTTGCAATTTTTGCCG+AGG + chr7_1:66521009-66521028 Msa1031790:CDS 45.0%
ATTATGTGCGGGGACTGATT+TGG + chr7_1:66521139-66521158 Msa1031790:CDS 45.0%
TGTAAAGAAGCTGCTGTGTC+TGG + chr7_1:66521375-66521394 Msa1031790:three_prime_UTR 45.0%
!! TGTGGCATGGATTTGTTGCA+GGG + chr7_1:66521513-66521532 Msa1031790:three_prime_UTR 45.0%
AACATGCCTCATCCACATAC+AGG - chr7_1:66521653-66521672 None:intergenic 45.0%
!!! TTTTTCTGGTTTTCGCGCAG+TGG + chr7_1:66521807-66521826 Msa1031790:three_prime_UTR 45.0%
!!! AATGGCTTGGGTTTTGGAGT+TGG - chr7_1:66521840-66521859 None:intergenic 45.0%
TCCAAAACCCAAGCCATTTG+CGG + chr7_1:66521842-66521861 Msa1031790:three_prime_UTR 45.0%
!!! ATATTTTAATAATATCTTTT+TGG + chr7_1:66515037-66515056 Msa1031790:intron 5.0%
AGAGAGAGAGAGGAAAGGGA+GGG - chr7_1:66511417-66511436 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGGAA+AGG - chr7_1:66511422-66511441 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr7_1:66511425-66511444 None:intergenic 50.0%
! GGCGTTGAACGATCAAAACC+AGG + chr7_1:66511504-66511523 Msa1031790:CDS 50.0%
TTGGGAACGTTGGTCGTTGA+TGG - chr7_1:66511599-66511618 None:intergenic 50.0%
!!! GATTTTCGGCTTGGGAACGT+TGG - chr7_1:66511609-66511628 None:intergenic 50.0%
AGATGAAAGAGTCGTCGTGG+TGG - chr7_1:66511759-66511778 None:intergenic 50.0%
!! TGGATTGAGTTGAAGGGGAG+AGG - chr7_1:66511789-66511808 None:intergenic 50.0%
!! CGGAGAGTGGATTGAGTTGA+AGG - chr7_1:66511796-66511815 None:intergenic 50.0%
GAGAAGAAGAGAACGGAGAG+TGG - chr7_1:66511809-66511828 None:intergenic 50.0%
GAAGCTATGCGACACCGTTT+CGG + chr7_1:66511867-66511886 Msa1031790:CDS 50.0%
AGCAGAAGCGAGTTCCGAAA+CGG - chr7_1:66511884-66511903 None:intergenic 50.0%
TCTCTGATGACCTCGCTTCT+TGG + chr7_1:66511908-66511927 Msa1031790:CDS 50.0%
CTCCTGAAGCCTAGCATCAT+TGG - chr7_1:66511971-66511990 None:intergenic 50.0%
GTTGCTTGTGTTCGCGCAAT+TGG + chr7_1:66511996-66512015 Msa1031790:CDS 50.0%
GGCAATACGAACATCCGAAG+AGG - chr7_1:66512103-66512122 None:intergenic 50.0%
CTGGTTATACCTGTCACGGT+CGG - chr7_1:66512172-66512191 None:intergenic 50.0%
! GTGCCTGTTTGGATTGACTC+AGG + chr7_1:66512278-66512297 Msa1031790:intron 50.0%
GACCCTGAGTCAATCCAAAC+AGG - chr7_1:66512284-66512303 None:intergenic 50.0%
AGCTCACATAAGGGCTCGTT+TGG - chr7_1:66512642-66512661 None:intergenic 50.0%
TGTCAACAATTTGCCTCCGC+AGG - chr7_1:66513321-66513340 None:intergenic 50.0%
AGAAGAAGGGACTCGCCATT+TGG + chr7_1:66513381-66513400 Msa1031790:CDS 50.0%
GGTAACTTCCTCATCATCCC+AGG - chr7_1:66513451-66513470 None:intergenic 50.0%
TCAGGGGCAGCCAAATAAGT+TGG - chr7_1:66513673-66513692 None:intergenic 50.0%
CTTATTTGGCTGCCCCTGAA+TGG + chr7_1:66513674-66513693 Msa1031790:CDS 50.0%
!! CTAATGCCGGAAGCACTAAG+TGG - chr7_1:66514143-66514162 None:intergenic 50.0%
TTAGTGCTTCCGGCATTAGC+TGG + chr7_1:66514144-66514163 Msa1031790:CDS 50.0%
TATGTTATCAGGCGTGGGCT+AGG + chr7_1:66516121-66516140 Msa1031790:intron 50.0%
CAGGACTTCCTCCCATACAT+GGG + chr7_1:66516162-66516181 Msa1031790:CDS 50.0%
AGTTGTGCAGACTGGAGCAA+GGG - chr7_1:66516201-66516220 None:intergenic 50.0%
AAGTTGTGCAGACTGGAGCA+AGG - chr7_1:66516202-66516221 None:intergenic 50.0%
! CAGGCTTAAGTTGTGCAGAC+TGG - chr7_1:66516209-66516228 None:intergenic 50.0%
ATGCCAACCTGGTCAATCCA+AGG - chr7_1:66516794-66516813 None:intergenic 50.0%
ATAGAGAAGGGGCAGTCACA+AGG + chr7_1:66517086-66517105 Msa1031790:CDS 50.0%
GGGTCCAAGTTGTGTCAACA+AGG - chr7_1:66517580-66517599 None:intergenic 50.0%
TTGGACCCCATGCATCTGAA+TGG + chr7_1:66517592-66517611 Msa1031790:intron 50.0%
TGCTGCAACTAGCAAAGCCT+TGG + chr7_1:66517708-66517727 Msa1031790:intron 50.0%
GCTGCAACTAGCAAAGCCTT+GGG + chr7_1:66517709-66517728 Msa1031790:intron 50.0%
AGCAGAGAGAGCCAAAGAAG+AGG + chr7_1:66518218-66518237 Msa1031790:CDS 50.0%
GTGCTAGATTGGCGATTGCT+TGG + chr7_1:66518400-66518419 Msa1031790:intron 50.0%
GCTAGATTGGCGATTGCTTG+GGG + chr7_1:66518402-66518421 Msa1031790:intron 50.0%
ACAGCAAGACGGGAGTGAAA+GGG - chr7_1:66518510-66518529 None:intergenic 50.0%
ACAAATCATAAGAGGGGGCG+GGG - chr7_1:66518984-66519003 None:intergenic 50.0%
CACAAATCATAAGAGGGGGC+GGG - chr7_1:66518985-66519004 None:intergenic 50.0%
GGCAATTCTCCTTTCCTCTG+AGG - chr7_1:66519126-66519145 None:intergenic 50.0%
GTTCGACAGGTTCCCATCTT+TGG + chr7_1:66519389-66519408 Msa1031790:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr7_1:66519645-66519664 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr7_1:66519642-66519661 Msa1031790:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr7_1:66519648-66519667 Msa1031790:intron 50.0%
AGTTTGCATCTGGGTGGAAG+TGG - chr7_1:66520167-66520186 None:intergenic 50.0%
GTTGAAGCAAGGGTAGAAGG+CGG - chr7_1:66521224-66521243 None:intergenic 50.0%
! CAGGTTGAAGCAAGGGTAGA+AGG - chr7_1:66521227-66521246 None:intergenic 50.0%
CTTCTACCCTTGCTTCAACC+TGG + chr7_1:66521225-66521244 Msa1031790:CDS 50.0%
! CGATGACCAGGTTGAAGCAA+GGG - chr7_1:66521234-66521253 None:intergenic 50.0%
! ACGATGACCAGGTTGAAGCA+AGG - chr7_1:66521235-66521254 None:intergenic 50.0%
AACAGACACGCGTCTTCTGA+AGG - chr7_1:66521330-66521349 None:intergenic 50.0%
AAGACGCGTGTCTGTTGTCA+TGG + chr7_1:66521334-66521353 Msa1031790:three_prime_UTR 50.0%
AGACGCGTGTCTGTTGTCAT+GGG + chr7_1:66521335-66521354 Msa1031790:three_prime_UTR 50.0%
TTCAGACCAACAGATGCACC+TGG + chr7_1:66521431-66521450 Msa1031790:three_prime_UTR 50.0%
CACAAACCAGGTGCATCTGT+TGG - chr7_1:66521440-66521459 None:intergenic 50.0%
!! ACTGCTTGACTTGTGTGGCA+TGG + chr7_1:66521500-66521519 Msa1031790:three_prime_UTR 50.0%
!! GTGTGGCATGGATTTGTTGC+AGG + chr7_1:66521512-66521531 Msa1031790:three_prime_UTR 50.0%
!! GATTTGTTGCAGGGAGGTGT+TGG + chr7_1:66521522-66521541 Msa1031790:three_prime_UTR 50.0%
TCATGCCTCGATCCTGTATG+TGG + chr7_1:66521638-66521657 Msa1031790:three_prime_UTR 50.0%
CTCATCCACATACAGGATCG+AGG - chr7_1:66521646-66521665 None:intergenic 50.0%
CTCGATCCTGTATGTGGATG+AGG + chr7_1:66521644-66521663 Msa1031790:three_prime_UTR 50.0%
!! TCCGCAAATGGCTTGGGTTT+TGG - chr7_1:66521846-66521865 None:intergenic 50.0%
GAGAGAGAGAGAGGAAAGGG+AGG - chr7_1:66511418-66511437 None:intergenic 55.0%
!! GGTCGTTGATGGTGGACATG+AGG - chr7_1:66511588-66511607 None:intergenic 55.0%
! GGAACGTTGGTCGTTGATGG+TGG - chr7_1:66511596-66511615 None:intergenic 55.0%
GGAGGAGGTGAGAGAGTTTG+AGG - chr7_1:66511672-66511691 None:intergenic 55.0%
TTTCGGGGTTAGGGGAAGTG+TGG - chr7_1:66511693-66511712 None:intergenic 55.0%
TGGTGCGTGTTTCGGGGTTA+GGG - chr7_1:66511702-66511721 None:intergenic 55.0%
ATGGTGCGTGTTTCGGGGTT+AGG - chr7_1:66511703-66511722 None:intergenic 55.0%
TGGACATGGTGCGTGTTTCG+GGG - chr7_1:66511708-66511727 None:intergenic 55.0%
GTGGACATGGTGCGTGTTTC+GGG - chr7_1:66511709-66511728 None:intergenic 55.0%
GGTGGACATGGTGCGTGTTT+CGG - chr7_1:66511710-66511729 None:intergenic 55.0%
! TGAGTTGAAGGGGAGAGGTG+TGG - chr7_1:66511784-66511803 None:intergenic 55.0%
CCTGTCACGGTCGGATGAAT+TGG - chr7_1:66512163-66512182 None:intergenic 55.0%
CCAATTCATCCGACCGTGAC+AGG + chr7_1:66512160-66512179 Msa1031790:CDS 55.0%
!! AGGGTAATGGATGGGAAGGG+AGG + chr7_1:66513051-66513070 Msa1031790:intron 55.0%
AATGGATGGGAAGGGAGGAG+AGG + chr7_1:66513056-66513075 Msa1031790:intron 55.0%
ATGGATGGGAAGGGAGGAGA+GGG + chr7_1:66513057-66513076 Msa1031790:intron 55.0%
TGGTCAAGAGGCAACTGCAC+AGG + chr7_1:66513249-66513268 Msa1031790:CDS 55.0%
TCAAGAGGCAACTGCACAGG+AGG + chr7_1:66513252-66513271 Msa1031790:CDS 55.0%
ATTTGCCTCCGCAGGAAACG+TGG - chr7_1:66513313-66513332 None:intergenic 55.0%
TGATCCTGCTTGGCATGCTG+CGG + chr7_1:66513528-66513547 Msa1031790:CDS 55.0%
! GTGAGCGAGGATGATGATGC+TGG + chr7_1:66513550-66513569 Msa1031790:CDS 55.0%
GGCAGCAATTCAGACGCAAC+TGG - chr7_1:66513652-66513671 None:intergenic 55.0%
CAAGTGCAACGAGTGCAGCA+TGG - chr7_1:66513708-66513727 None:intergenic 55.0%
CAAGTCTGGCCCCAAATCTG+TGG - chr7_1:66514106-66514125 None:intergenic 55.0%
! AGATTTGGGGCCAGACTTGC+AGG + chr7_1:66514107-66514126 Msa1031790:CDS 55.0%
TCCATGGCTCCAGCTAATGC+CGG - chr7_1:66514156-66514175 None:intergenic 55.0%
GTTCAGGGACGATGCCAAAC+AGG + chr7_1:66515756-66515775 Msa1031790:CDS 55.0%
GCTAGGCTTTGCAAGTGCCT+CGG + chr7_1:66516138-66516157 Msa1031790:CDS 55.0%
CTAGGCTTTGCAAGTGCCTC+GGG + chr7_1:66516139-66516158 Msa1031790:CDS 55.0%
GCAGGACTTCCTCCCATACA+TGG + chr7_1:66516161-66516180 Msa1031790:CDS 55.0%
GACCAGTGTCTTGGAGGAGA+AGG + chr7_1:66516712-66516731 Msa1031790:CDS 55.0%
AGCCTTCTCCTCCAAGACAC+TGG - chr7_1:66516717-66516736 None:intergenic 55.0%
GTTAGGAAGGCAGCAGCTTC+AGG + chr7_1:66516934-66516953 Msa1031790:CDS 55.0%
CACAGCAAGACGGGAGTGAA+AGG - chr7_1:66518511-66518530 None:intergenic 55.0%
AAATCATAAGAGGGGGCGGG+GGG - chr7_1:66518982-66519001 None:intergenic 55.0%
CAAATCATAAGAGGGGGCGG+GGG - chr7_1:66518983-66519002 None:intergenic 55.0%
CAGGCAGCTGTTTATGGGGT+TGG + chr7_1:66519499-66519518 Msa1031790:intron 55.0%
! GTTGGTGTCTGTGCCGAGTT+TGG + chr7_1:66519517-66519536 Msa1031790:CDS 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr7_1:66519650-66519669 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr7_1:66519656-66519675 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr7_1:66519657-66519676 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr7_1:66519656-66519675 Msa1031790:intron 55.0%
! TTGAGGGTGCAACGATGACC+AGG - chr7_1:66521246-66521265 None:intergenic 55.0%
!! GGCATGGATTTGTTGCAGGG+AGG + chr7_1:66521516-66521535 Msa1031790:three_prime_UTR 55.0%
!! TGTTGCAGGGAGGTGTTGGT+TGG + chr7_1:66521526-66521545 Msa1031790:three_prime_UTR 55.0%
! GGTTAGGGGAAGTGTGGAGG+AGG - chr7_1:66511687-66511706 None:intergenic 60.0%
GGTGCGTGTTTCGGGGTTAG+GGG - chr7_1:66511701-66511720 None:intergenic 60.0%
!! ACGGAGGAGGATGGTGGACA+TGG - chr7_1:66511722-66511741 None:intergenic 60.0%
ATGACGACGGAGGAGGATGG+TGG - chr7_1:66511728-66511747 None:intergenic 60.0%
GAGATGACGACGGAGGAGGA+TGG - chr7_1:66511731-66511750 None:intergenic 60.0%
GCAAGTCAGGCCAAGAAGCG+AGG - chr7_1:66511921-66511940 None:intergenic 60.0%
TGGATGGGAAGGGAGGAGAG+GGG + chr7_1:66513058-66513077 Msa1031790:intron 60.0%
GGACTGAGCCACGTTTCCTG+CGG + chr7_1:66513302-66513321 Msa1031790:CDS 60.0%
TGCCATGCTGCAGATTGCCG+AGG + chr7_1:66513348-66513367 Msa1031790:CDS 60.0%
AGCCTCGGCAATCTGCAGCA+TGG - chr7_1:66513353-66513372 None:intergenic 60.0%
AGCGTGCTCCTGGGATGATG+AGG + chr7_1:66513440-66513459 Msa1031790:CDS 60.0%
CTGATCCAAACCCTCGGGTG+CGG + chr7_1:66514049-66514068 Msa1031790:CDS 60.0%
TCCGGCATTAGCTGGAGCCA+TGG + chr7_1:66514152-66514171 Msa1031790:CDS 60.0%
TGTGCAGACTGGAGCAAGGG+AGG - chr7_1:66516198-66516217 None:intergenic 60.0%
ACCTGTCTTCCAGGAGCCAG+AGG + chr7_1:66517249-66517268 Msa1031790:intron 60.0%
! ACCTCTGGCTCCTGGAAGAC+AGG - chr7_1:66517253-66517272 None:intergenic 60.0%
GGTGTCTGTGCCGAGTTTGG+TGG + chr7_1:66519520-66519539 Msa1031790:CDS 60.0%
GGTTGCAGGTTGTTCCAGCC+TGG + chr7_1:66520759-66520778 Msa1031790:intron 60.0%
GGCAAGCAACTTAGCCAGGC+TGG - chr7_1:66520776-66520795 None:intergenic 60.0%
! CGGGGTTAGGGGAAGTGTGG+AGG - chr7_1:66511690-66511709 None:intergenic 65.0%
GCGTGAGATGACGACGGAGG+AGG - chr7_1:66511735-66511754 None:intergenic 65.0%
GGTGGCGCGTGAGATGACGA+CGG - chr7_1:66511741-66511760 None:intergenic 65.0%
CTGAGCCACGTTTCCTGCGG+AGG + chr7_1:66513305-66513324 Msa1031790:CDS 65.0%
! AGGAGCACGCTCTCTCGCCT+CGG - chr7_1:66513431-66513450 None:intergenic 65.0%
! AGGCGAGAGAGCGTGCTCCT+GGG + chr7_1:66513431-66513450 Msa1031790:CDS 65.0%
CTCACCGCAGCATGCCAAGC+AGG - chr7_1:66513535-66513554 None:intergenic 65.0%
TTGGCATGCTGCGGTGAGCG+AGG + chr7_1:66513537-66513556 Msa1031790:CDS 65.0%
CGCACCCGAGGGTTTGGATC+AGG - chr7_1:66514051-66514070 None:intergenic 65.0%
ATCCAAACCCTCGGGTGCGG+TGG + chr7_1:66514052-66514071 Msa1031790:CDS 65.0%
TCCAAACCCTCGGGTGCGGT+GGG + chr7_1:66514053-66514072 Msa1031790:CDS 65.0%
GCTTTGCAAGTGCCTCGGGC+AGG + chr7_1:66516143-66516162 Msa1031790:CDS 65.0%
ATGGGAGGAAGTCCTGCCCG+AGG - chr7_1:66516158-66516177 None:intergenic 65.0%
GGCGCGTGAGATGACGACGG+AGG - chr7_1:66511738-66511757 None:intergenic 70.0%
! GAGGCGAGAGAGCGTGCTCC+TGG + chr7_1:66513430-66513449 Msa1031790:CDS 70.0%
AAACCCTCGGGTGCGGTGGG+CGG + chr7_1:66514056-66514075 Msa1031790:CDS 70.0%
GCCCACCGCACCCGAGGGTT+TGG - chr7_1:66514057-66514076 None:intergenic 75.0%
TAGCCGCCCACCGCACCCGA+GGG - chr7_1:66514062-66514081 None:intergenic 75.0%
ATAGCCGCCCACCGCACCCG+AGG - chr7_1:66514063-66514082 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 66511319 66521944 66511319 ID=Msa1031790;Name=Msa1031790
chr7_1 mRNA 66511319 66521944 66511319 ID=Msa1031790-mRNA-1;Parent=Msa1031790;Name=Msa1031790-mRNA-1;_AED=0.05;_eAED=0.05;_QI=183|1|1|1|1|1|21|643|1118
chr7_1 exon 66511319 66512181 66511319 ID=Msa1031790-mRNA-1:exon:14993;Parent=Msa1031790-mRNA-1
chr7_1 exon 66513195 66513753 66513195 ID=Msa1031790-mRNA-1:exon:14994;Parent=Msa1031790-mRNA-1
chr7_1 exon 66513997 66514200 66513997 ID=Msa1031790-mRNA-1:exon:14995;Parent=Msa1031790-mRNA-1
chr7_1 exon 66514889 66514993 66514889 ID=Msa1031790-mRNA-1:exon:14996;Parent=Msa1031790-mRNA-1
chr7_1 exon 66515428 66515493 66515428 ID=Msa1031790-mRNA-1:exon:14997;Parent=Msa1031790-mRNA-1
chr7_1 exon 66515613 66515777 66515613 ID=Msa1031790-mRNA-1:exon:14998;Parent=Msa1031790-mRNA-1
chr7_1 exon 66515933 66516007 66515933 ID=Msa1031790-mRNA-1:exon:14999;Parent=Msa1031790-mRNA-1
chr7_1 exon 66516132 66516283 66516132 ID=Msa1031790-mRNA-1:exon:15000;Parent=Msa1031790-mRNA-1
chr7_1 exon 66516670 66516805 66516670 ID=Msa1031790-mRNA-1:exon:15001;Parent=Msa1031790-mRNA-1
chr7_1 exon 66516886 66516955 66516886 ID=Msa1031790-mRNA-1:exon:15002;Parent=Msa1031790-mRNA-1
chr7_1 exon 66517051 66517178 66517051 ID=Msa1031790-mRNA-1:exon:15003;Parent=Msa1031790-mRNA-1
chr7_1 exon 66517262 66517318 66517262 ID=Msa1031790-mRNA-1:exon:15004;Parent=Msa1031790-mRNA-1
chr7_1 exon 66518123 66518308 66518123 ID=Msa1031790-mRNA-1:exon:15005;Parent=Msa1031790-mRNA-1
chr7_1 exon 66518407 66518499 66518407 ID=Msa1031790-mRNA-1:exon:15006;Parent=Msa1031790-mRNA-1
chr7_1 exon 66519110 66519195 66519110 ID=Msa1031790-mRNA-1:exon:15007;Parent=Msa1031790-mRNA-1
chr7_1 exon 66519331 66519397 66519331 ID=Msa1031790-mRNA-1:exon:15008;Parent=Msa1031790-mRNA-1
chr7_1 exon 66519502 66519568 66519502 ID=Msa1031790-mRNA-1:exon:15009;Parent=Msa1031790-mRNA-1
chr7_1 exon 66519767 66519903 66519767 ID=Msa1031790-mRNA-1:exon:15010;Parent=Msa1031790-mRNA-1
chr7_1 exon 66520767 66520858 66520767 ID=Msa1031790-mRNA-1:exon:15011;Parent=Msa1031790-mRNA-1
chr7_1 exon 66520964 66521030 66520964 ID=Msa1031790-mRNA-1:exon:15012;Parent=Msa1031790-mRNA-1
chr7_1 exon 66521137 66521944 66521137 ID=Msa1031790-mRNA-1:exon:15013;Parent=Msa1031790-mRNA-1
chr7_1 five_prime_UTR 66511319 66511501 66511319 ID=Msa1031790-mRNA-1:five_prime_utr;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66511502 66512181 66511502 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66513195 66513753 66513195 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66513997 66514200 66513997 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66514889 66514993 66514889 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66515428 66515493 66515428 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66515613 66515777 66515613 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66515933 66516007 66515933 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66516132 66516283 66516132 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66516670 66516805 66516670 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66516886 66516955 66516886 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66517051 66517178 66517051 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66517262 66517318 66517262 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66518123 66518308 66518123 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66518407 66518499 66518407 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66519110 66519195 66519110 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66519331 66519397 66519331 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66519502 66519568 66519502 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66519767 66519903 66519767 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66520767 66520858 66520767 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66520964 66521030 66520964 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 CDS 66521137 66521301 66521137 ID=Msa1031790-mRNA-1:cds;Parent=Msa1031790-mRNA-1
chr7_1 three_prime_UTR 66521302 66521944 66521302 ID=Msa1031790-mRNA-1:three_prime_utr;Parent=Msa1031790-mRNA-1
Gene Sequence

>Msa1031790

ATGGCGTTGAACGATCAAAACCAGGCACAAATGGCTCTAATTCTAGGACCGGATTCAACCCACTTCGAATCCCTAATCACAAACCTCATGTCCACCATCAACGACCAACGTTCCCAAGCCGAAAATCTCTTCAATCTCTGCAAACAAACCTATCCCGATTCCTTAATCCTCAAACTCTCTCACCTCCTCCACACTTCCCCTAACCCCGAAACACGCACCATGTCCACCATCCTCCTCCGTCGTCATCTCACGCGCCACCACGACGACTCTTTCATCTATCCACACCTCTCCCCTTCAACTCAATCCACTCTCCGTTCTCTTCTTCTCTCATCTCTCCATCAAGAACCAATCAAATCCATCGTTAAGAAGCTATGCGACACCGTTTCGGAACTCGCTTCTGCTCTTCTCTCTGATGACCTCGCTTCTTGGCCTGACTTGCTTCCGCTTCTTTTTCAATGGGTTACTTCCAATGATGCTAGGCTTCAGGAGATTGCGTTGCTTGTGTTCGCGCAATTGGCGCATTATATTGGTGAAACCCTACTTCCTCAATTGTCTACTCTTCATTCTGTTTTTCTTCGTTGTCTTAGTGCTGCTACTTCCTCTTCGGATGTTCGTATTGCCGCCCTTGCTGCAAGTATCAATTTCGTTCAGTGTCTCTCCAATTCATCCGACCGTGACAGGTTTCAGGATTTGCTGCCCCTCATGATGCAGACATTGACTGAGGCATTGAATTCTGGTCAAGAGGCAACTGCACAGGAGGCACTTGAACTTCTCATTGAGCTTGCTGGGACTGAGCCACGTTTCCTGCGGAGGCAAATTGTTGACATTGTTGGTGCCATGCTGCAGATTGCCGAGGCTGAGTCATTAGAAGAAGGGACTCGCCATTTGGCTATTGAGTTTGTTGTTACACTTGCCGAGGCGAGAGAGCGTGCTCCTGGGATGATGAGGAAGTTACCGCAGTTTGTAAAGAAGTTGTTTGGTGTGCTAATGAATTTGTTGTTGGATATTGAGGATGATCCTGCTTGGCATGCTGCGGTGAGCGAGGATGATGATGCTGGTGAGACTAGTAACTACGGATTTGGTCAGGAATGTTTAGATAGACTTTCAATTGCTTTGGGCGGGAACACGATAGTGCCAGTTGCGTCTGAATTGCTGCCAACTTATTTGGCTGCCCCTGAATGGCAAAAACACCATGCTGCACTCGTTGCACTTGCACAAATTGCAGAGGGTTGTTCAAAGGTGATGACAAAGAATTTGGAGCATGTATTATCAATGGTTTTGAATTCATTTCCTGATCCAAACCCTCGGGTGCGGTGGGCGGCTATAAATGCAATTGGGCAATTGTCCACAGATTTGGGGCCAGACTTGCAGGATAAATATCACCACTTAGTGCTTCCGGCATTAGCTGGAGCCATGGATGATTTTCAAAATCCTCGAGTACAGGCTCATGCTGCTTCTGCAGTGCTAAATTTCACTGAGAATTGCACCCCAGATATTTTAGTACCTTATTTGGATGGGATTGTGAGCAAACTTCTTGTACTCCTTCAGAGTGGAAAGCAGATGGTTCAAGAGGGTGCTTTGACAGCTTTAGCATCAGTCGCTGATTCTTCACAGGAGAAATTTCAGAAGTATTATGATGCTGTGATTCCATACCTAAAAGCAATTTTGTTGAATGCAAATGATAAATCTAATCGTATGCTTCGTGCCAAAGCAATGGAGTGTATTAGTTTGGTAGGTATGGCTGTTGGAAAAGAGAAGTTCAGGGACGATGCCAAACAGGTTATGGATGTCTTGATGTCACTGCAACAATCTCAACTGGATTCTGATGATCCAACCGCGAGTTACATGTTACAAGCGTGGGCTAGGCTTTGCAAGTGCCTCGGGCAGGACTTCCTCCCATACATGGGTTTTGTCATGCCTCCCTTGCTCCAGTCTGCACAACTTAAGCCTGACGTGTCAATTACATCAGCAGATTCTGACGCTGAATTTGATGAAGATGATGACAGCATTGAAACCATTACTCTCGGGGATAAAAGAATAGGCATTAAGACCAGTGTCTTGGAGGAGAAGGCTACAGCATGTAACATGTTATGTTGCTACGCTGATGAGTTGAAGGAAGGCTTTTTTCCTTGGATTGACCAGGTTGCTTCCACATTGGTTCCTCTCCTTAAATTTTACTTCCATGAAGAAGTTAGGAAGGCAGCAGCTTCAGCTATGCCAGAACTGTTGTCTTCAGCAAAATCGGCTATAGAGAAGGGGCAGTCACAAGGCCGTGACGCAACATACCTAAAACAATTGTCTGATTATATAATTCCAAATTTGGTGGAAGCTTTACACAAGGAGCCAGAGGTAGAAATTTGTGCAAGCATGTTGGGCGCACTGAATGAATGCATACAGGTATCAGGACCACATCTAGATGAAAAGCAAGTAAGGAGCATTGTGGATGAGATTAAACAAGTCATCACTGCCAGTTCATCCAGAAAGCATGAAAGAGCAGAGAGAGCCAAAGAAGAGGACTTTGATGCTGAAGAAAGAGAACTACTCAAGGAAGAAAATGAGTTAGAAGAAGAACTTTTTGATCAAATTGGCGATTGCTTGGGGACTTTGACAAAAACATTTAGGGCATCTTTTTTGCCTTTCTTTGAAGAGCTTTCGTCATACTTAACACCTATGTTTGGTAAAGACAAAACCTCAGAGGAAAGGAGAATTGCCATTTGTATATTTGATGACATTGCTGAGCACTGCCGCGAAGCAGCTCATAAATATTATGGTTCGTTTCTTCCATTCTTGCTTGAAGCTTGCAATGATGAGTGTTCAGATGTTCGACAGGCAGCTGTTTATGGGGTTGGTGTCTGTGCCGAGTTTGGTGGATCTGTTTTCAAACCCCTTGTTGGAGAGGCACTTTCAAGGTTAAATGCTGTGATAACACATCCCAATGCACAGCATTCTGATAATGTAATGGCATATGATAATGCTGTTTCAGCTCTTGGAAAAATATGCCAGTTCCACCGTGATAGCATAAATGCAGCACAGGTTGTTCCAGCCTGGCTAAGTTGCTTGCCTATAAAAGGTGATTTAATCGAGGCTAAGGTTGTGCATGACCTTCTTTGTTCAATGGTTGAAAGATCAGATAAAGAACTTATAGGCCATAACAATCAATATCTTTCCAAGATCGTTGCAATTTTTGCCGAGATATTATGTGCGGGGACTGATTTGGCAACTGAACAAACTGTGAGTCGGATGATTAATTTATTGAGACAACTTCAACAAACTTTGCCGCCTTCTACCCTTGCTTCAACCTGGTCATCGTTGCACCCTCAACAACAACTTGCACTTCAGTCCATCCTATCATCCTAA
Protein sequence

>Msa1031790

MALNDQNQAQMALILGPDSTHFESLITNLMSTINDQRSQAENLFNLCKQTYPDSLILKLSHLLHTSPNPETRTMSTILLRRHLTRHHDDSFIYPHLSPSTQSTLRSLLLSSLHQEPIKSIVKKLCDTVSELASALLSDDLASWPDLLPLLFQWVTSNDARLQEIALLVFAQLAHYIGETLLPQLSTLHSVFLRCLSAATSSSDVRIAALAASINFVQCLSNSSDRDRFQDLLPLMMQTLTEALNSGQEATAQEALELLIELAGTEPRFLRRQIVDIVGAMLQIAEAESLEEGTRHLAIEFVVTLAEARERAPGMMRKLPQFVKKLFGVLMNLLLDIEDDPAWHAAVSEDDDAGETSNYGFGQECLDRLSIALGGNTIVPVASELLPTYLAAPEWQKHHAALVALAQIAEGCSKVMTKNLEHVLSMVLNSFPDPNPRVRWAAINAIGQLSTDLGPDLQDKYHHLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCTPDILVPYLDGIVSKLLVLLQSGKQMVQEGALTALASVADSSQEKFQKYYDAVIPYLKAILLNANDKSNRMLRAKAMECISLVGMAVGKEKFRDDAKQVMDVLMSLQQSQLDSDDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLLQSAQLKPDVSITSADSDAEFDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVASTLVPLLKFYFHEEVRKAAASAMPELLSSAKSAIEKGQSQGRDATYLKQLSDYIIPNLVEALHKEPEVEICASMLGALNECIQVSGPHLDEKQVRSIVDEIKQVITASSSRKHERAERAKEEDFDAEERELLKEENELEEELFDQIGDCLGTLTKTFRASFLPFFEELSSYLTPMFGKDKTSEERRIAICIFDDIAEHCREAAHKYYGSFLPFLLEACNDECSDVRQAAVYGVGVCAEFGGSVFKPLVGEALSRLNAVITHPNAQHSDNVMAYDNAVSALGKICQFHRDSINAAQVVPAWLSCLPIKGDLIEAKVVHDLLCSMVERSDKELIGHNNQYLSKIVAIFAEILCAGTDLATEQTVSRMINLLRQLQQTLPPSTLASTWSSLHPQQQLALQSILSS*