Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454870 | sp|Q39221|STLP2_ARATH | 49.492 | 394 | 184 | 7 | 9 | 400 | 11 | 391 | 2.81e-112 | 337 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454870 | A0A072UND0 | 96.837 | 411 | 13 | 0 | 1 | 411 | 1 | 411 | 0.0 | 824 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017390 | Msa1454870 | 0.810210 | 1.290948e-50 | -8.615850e-47 |
| Msa0020390 | Msa1454870 | 0.801857 | 7.385759e-49 | -8.615850e-47 |
| Msa0065550 | Msa1454870 | 0.826317 | 2.898738e-54 | -8.615850e-47 |
| Msa0074750 | Msa1454870 | 0.818058 | 2.389949e-52 | -8.615850e-47 |
| Msa0081650 | Msa1454870 | 0.812814 | 3.507255e-51 | -8.615850e-47 |
| Msa0089980 | Msa1454870 | 0.818148 | 2.279723e-52 | -8.615850e-47 |
| Msa0090010 | Msa1454870 | 0.815011 | 1.150194e-51 | -8.615850e-47 |
| Msa0090550 | Msa1454870 | 0.821629 | 3.646709e-53 | -8.615850e-47 |
| Msa0106620 | Msa1454870 | 0.840340 | 9.224135e-58 | -8.615850e-47 |
| Msa0106710 | Msa1454870 | 0.829267 | 5.664773e-55 | -8.615850e-47 |
| Msa1393820 | Msa1454870 | 0.810186 | 1.306375e-50 | -8.615850e-47 |
| Msa1400120 | Msa1454870 | 0.812767 | 3.592910e-51 | -8.615850e-47 |
| Msa1407970 | Msa1454870 | 0.825190 | 5.365828e-54 | -8.615850e-47 |
| Msa1411950 | Msa1454870 | 0.816598 | 5.092358e-52 | -8.615850e-47 |
| Msa1424350 | Msa1454870 | 0.801379 | 9.257386e-49 | -8.615850e-47 |
| Msa1434090 | Msa1454870 | 0.821687 | 3.535962e-53 | -8.615850e-47 |
| Msa1437270 | Msa1454870 | 0.808124 | 3.612692e-50 | -8.615850e-47 |
| Msa1437330 | Msa1454870 | 0.817583 | 3.058975e-52 | -8.615850e-47 |
| Msa1444120 | Msa1454870 | 0.803429 | 3.500988e-49 | -8.615850e-47 |
| Msa1447180 | Msa1454870 | 0.805716 | 1.167014e-49 | -8.615850e-47 |
| Msa1450720 | Msa1454870 | 0.817925 | 2.560196e-52 | -8.615850e-47 |
| Msa1454680 | Msa1454870 | 0.816190 | 6.284003e-52 | -8.615850e-47 |
| Msa0610880 | Msa1454870 | 0.901231 | 3.302898e-78 | -8.615850e-47 |
| Msa0614510 | Msa1454870 | 0.800486 | 1.409350e-48 | -8.615850e-47 |
| Msa0622120 | Msa1454870 | 0.809187 | 2.141606e-50 | -8.615850e-47 |
| Msa0628420 | Msa1454870 | 0.828810 | 7.310813e-55 | -8.615850e-47 |
| Msa0640940 | Msa1454870 | 0.800608 | 1.330811e-48 | -8.615850e-47 |
| Msa0647430 | Msa1454870 | 0.806057 | 9.893097e-50 | -8.615850e-47 |
| Msa0651560 | Msa1454870 | 0.824565 | 7.533855e-54 | -8.615850e-47 |
| Msa0652690 | Msa1454870 | 0.805510 | 1.289507e-49 | -8.615850e-47 |
| Msa0673120 | Msa1454870 | 0.804954 | 1.685501e-49 | -8.615850e-47 |
| Msa0689440 | Msa1454870 | 0.822983 | 1.768574e-53 | -8.615850e-47 |
| Msa0697680 | Msa1454870 | 0.831904 | 1.281233e-55 | -8.615850e-47 |
| Msa0699780 | Msa1454870 | 0.809937 | 1.478383e-50 | -8.615850e-47 |
| Msa0703440 | Msa1454870 | 0.803289 | 3.742394e-49 | -8.615850e-47 |
| Msa0705390 | Msa1454870 | 0.810147 | 1.331937e-50 | -8.615850e-47 |
| Msa0705990 | Msa1454870 | 0.822401 | 2.416089e-53 | -8.615850e-47 |
| Msa0709120 | Msa1454870 | 0.816687 | 4.862701e-52 | -8.615850e-47 |
| Msa0756380 | Msa1454870 | 0.838550 | 2.690206e-57 | -8.615850e-47 |
| Msa0789560 | Msa1454870 | 0.814685 | 1.358469e-51 | -8.615850e-47 |
| Msa0139670 | Msa1454870 | 0.817987 | 2.479306e-52 | -8.615850e-47 |
| Msa0149440 | Msa1454870 | 0.825719 | 4.021422e-54 | -8.615850e-47 |
| Msa0183870 | Msa1454870 | 0.816342 | 5.809782e-52 | -8.615850e-47 |
| Msa0192640 | Msa1454870 | 0.805930 | 1.052409e-49 | -8.615850e-47 |
| Msa0194920 | Msa1454870 | 0.814119 | 1.811804e-51 | -8.615850e-47 |
| Msa0220730 | Msa1454870 | 0.833927 | 4.025954e-56 | -8.615850e-47 |
| Msa0223330 | Msa1454870 | 0.836249 | 1.045165e-56 | -8.615850e-47 |
| Msa0233370 | Msa1454870 | 0.811944 | 5.433137e-51 | -8.615850e-47 |
| Msa1234620 | Msa1454870 | 0.805814 | 1.112861e-49 | -8.615850e-47 |
| Msa1248830 | Msa1454870 | 0.815041 | 1.132564e-51 | -8.615850e-47 |
| Msa1259640 | Msa1454870 | 0.807467 | 4.983955e-50 | -8.615850e-47 |
| Msa1265590 | Msa1454870 | 0.834894 | 2.301688e-56 | -8.615850e-47 |
| Msa1271130 | Msa1454870 | 0.801217 | 9.990843e-49 | -8.615850e-47 |
| Msa1304940 | Msa1454870 | 0.803090 | 4.114623e-49 | -8.615850e-47 |
| Msa1325410 | Msa1454870 | -0.804221 | 2.396893e-49 | -8.615850e-47 |
| Msa1329790 | Msa1454870 | 0.810950 | 8.930718e-51 | -8.615850e-47 |
| Msa1336040 | Msa1454870 | 0.803394 | 3.560391e-49 | -8.615850e-47 |
| Msa1340200 | Msa1454870 | 0.813870 | 2.056142e-51 | -8.615850e-47 |
| Msa1342630 | Msa1454870 | 0.807448 | 5.029535e-50 | -8.615850e-47 |
| Msa0379260 | Msa1454870 | 0.800590 | 1.341874e-48 | -8.615850e-47 |
| Msa0382370 | Msa1454870 | 0.843546 | 1.310745e-58 | -8.615850e-47 |
| Msa0382680 | Msa1454870 | 0.803643 | 3.160777e-49 | -8.615850e-47 |
| Msa0395980 | Msa1454870 | 0.838492 | 2.784446e-57 | -8.615850e-47 |
| Msa0399760 | Msa1454870 | 0.801318 | 9.527513e-49 | -8.615850e-47 |
| Msa0432160 | Msa1454870 | 0.844249 | 8.496582e-59 | -8.615850e-47 |
| Msa0437020 | Msa1454870 | 0.802156 | 6.413485e-49 | -8.615850e-47 |
| Msa0440510 | Msa1454870 | 0.810064 | 1.388017e-50 | -8.615850e-47 |
| Msa0450400 | Msa1454870 | -0.847055 | 1.472638e-59 | -8.615850e-47 |
| Msa0450480 | Msa1454870 | 0.823918 | 1.069377e-53 | -8.615850e-47 |
| Msa0476680 | Msa1454870 | 0.841800 | 3.815117e-58 | -8.615850e-47 |
| Msa0480780 | Msa1454870 | 0.808443 | 3.089630e-50 | -8.615850e-47 |
| Msa0481970 | Msa1454870 | 0.827421 | 1.579366e-54 | -8.615850e-47 |
| Msa1031790 | Msa1454870 | 0.812244 | 4.674040e-51 | -8.615850e-47 |
| Msa1034500 | Msa1454870 | 0.805531 | 1.276241e-49 | -8.615850e-47 |
| Msa1042660 | Msa1454870 | 0.802826 | 4.666496e-49 | -8.615850e-47 |
| Msa1089450 | Msa1454870 | 0.805648 | 1.206021e-49 | -8.615850e-47 |
| Msa0244970 | Msa1454870 | 0.824663 | 7.142977e-54 | -8.615850e-47 |
| Msa0244980 | Msa1454870 | 0.801137 | 1.037747e-48 | -8.615850e-47 |
| Msa0249310 | Msa1454870 | 0.809144 | 2.187335e-50 | -8.615850e-47 |
| Msa0257490 | Msa1454870 | 0.814850 | 1.248899e-51 | -8.615850e-47 |
| Msa0279850 | Msa1454870 | 0.827739 | 1.324631e-54 | -8.615850e-47 |
| Msa0281530 | Msa1454870 | 0.801158 | 1.027336e-48 | -8.615850e-47 |
| Msa0283420 | Msa1454870 | 0.815333 | 9.753342e-52 | -8.615850e-47 |
| Msa0296790 | Msa1454870 | 0.810148 | 1.331105e-50 | -8.615850e-47 |
| Msa0300830 | Msa1454870 | 0.800994 | 1.109654e-48 | -8.615850e-47 |
| Msa0308440 | Msa1454870 | 0.814354 | 1.608313e-51 | -8.615850e-47 |
| Msa0317970 | Msa1454870 | 0.805741 | 1.152885e-49 | -8.615850e-47 |
| Msa0321690 | Msa1454870 | 0.821337 | 4.259685e-53 | -8.615850e-47 |
| Msa0322900 | Msa1454870 | 0.820622 | 6.223853e-53 | -8.615850e-47 |
| Msa0347990 | Msa1454870 | 0.801869 | 7.347152e-49 | -8.615850e-47 |
| Msa0358400 | Msa1454870 | 0.808149 | 3.568339e-50 | -8.615850e-47 |
| Msa0362890 | Msa1454870 | 0.804901 | 1.728965e-49 | -8.615850e-47 |
| Msa1108710 | Msa1454870 | 0.803082 | 4.130668e-49 | -8.615850e-47 |
| Msa1127430 | Msa1454870 | 0.823372 | 1.434797e-53 | -8.615850e-47 |
| Msa1201640 | Msa1454870 | 0.815590 | 8.550327e-52 | -8.615850e-47 |
| Msa1211340 | Msa1454870 | 0.815472 | 9.085257e-52 | -8.615850e-47 |
| Msa1221330 | Msa1454870 | 0.831600 | 1.522917e-55 | -8.615850e-47 |
| Msa0491000 | Msa1454870 | 0.834404 | 3.056571e-56 | -8.615850e-47 |
| Msa0520270 | Msa1454870 | 0.801385 | 9.232314e-49 | -8.615850e-47 |
| Msa0521010 | Msa1454870 | 0.842472 | 2.532444e-58 | -8.615850e-47 |
| Msa0526020 | Msa1454870 | 0.823069 | 1.689092e-53 | -8.615850e-47 |
| Msa0531250 | Msa1454870 | 0.834685 | 2.598151e-56 | -8.615850e-47 |
| Msa0560500 | Msa1454870 | 0.839869 | 1.224134e-57 | -8.615850e-47 |
| Msa0578920 | Msa1454870 | 0.906266 | 1.782379e-80 | -8.615850e-47 |
| Msa0581400 | Msa1454870 | 0.840991 | 6.228326e-58 | -8.615850e-47 |
| Msa0588090 | Msa1454870 | 0.824369 | 8.380116e-54 | -8.615850e-47 |
| Msa0844280 | Msa1454870 | 0.808945 | 2.412822e-50 | -8.615850e-47 |
| Msa0933760 | Msa1454870 | 0.821250 | 4.461616e-53 | -8.615850e-47 |
| Msa0934140 | Msa1454870 | 0.804183 | 2.441416e-49 | -8.615850e-47 |
| Msa0945240 | Msa1454870 | 0.810259 | 1.259684e-50 | -8.615850e-47 |
| Msa0958000 | Msa1454870 | 0.809001 | 2.347817e-50 | -8.615850e-47 |
| Msa0971160 | Msa1454870 | 0.804739 | 1.869504e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454870 | MtrunA17_Chr4g0043971 | 96.837 | 411 | 13 | 0 | 1 | 411 | 1 | 411 | 0.0 | 824 |
| Msa1454870 | MtrunA17_Chr1g0197641 | 32.239 | 335 | 208 | 9 | 72 | 398 | 30 | 353 | 7.70e-50 | 173 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454870 | AT2G01470.1 | 49.492 | 394 | 184 | 7 | 9 | 400 | 11 | 391 | 2.85e-113 | 337 |
| Msa1454870 | AT5G50650.1 | 48.564 | 383 | 174 | 8 | 1 | 382 | 1 | 361 | 1.83e-110 | 330 |
| Msa1454870 | AT5G50550.1 | 48.564 | 383 | 174 | 8 | 1 | 382 | 1 | 361 | 1.83e-110 | 330 |
| Msa1454870 | AT3G52190.1 | 29.674 | 337 | 221 | 7 | 64 | 393 | 27 | 354 | 3.23e-42 | 153 |
Find 119 sgRNAs with CRISPR-Local
Find 586 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAGCTGATGGAAAGTTTC+TGG | 0.216501 | tig0035480:-19061 | Msa1454870:CDS |
| GTGGCGGCCCCTGCAGGGTT+TGG | 0.223489 | tig0035480:-21416 | Msa1454870:CDS |
| TGGGAGGTGGCGGCCCCTGC+AGG | 0.245520 | tig0035480:-21422 | Msa1454870:CDS |
| TGGCAAGTTGATTGTCTCTT+TGG | 0.248816 | tig0035480:-21442 | Msa1454870:CDS |
| AATTGTTTGGGATATCAATT+TGG | 0.285256 | tig0035480:-16821 | Msa1454870:three_prime_UTR |
| CAATCATGAGTAAAATTGTT+TGG | 0.285270 | tig0035480:-16834 | Msa1454870:three_prime_UTR |
| TTCTTCAGGTTCGAAGGGTC+TGG | 0.285342 | tig0035480:+25072 | None:intergenic |
| TTCATTACAAACCTTGAATC+AGG | 0.290274 | tig0035480:+18065 | None:intergenic |
| ATTATGGTGTTAAATTGTTA+TGG | 0.295755 | tig0035480:-16884 | Msa1454870:three_prime_UTR |
| TTCCCATGTTTGTGTATTCC+AGG | 0.301485 | tig0035480:+19134 | None:intergenic |
| TGCAAAATATATACCTGTTC+TGG | 0.301923 | tig0035480:+19242 | None:intergenic |
| TGGCGGCCCCTGCAGGGTTT+GGG | 0.305184 | tig0035480:-21415 | Msa1454870:CDS |
| CATTACAGGATGGCAGTCTA+AGG | 0.306362 | tig0035480:-21711 | Msa1454870:intron |
| TGCCCGAGCAACACAGAATT+AGG | 0.307606 | tig0035480:+24856 | None:intergenic |
| CTCTGTAGATTGTATAATTA+TGG | 0.316112 | tig0035480:-16900 | Msa1454870:three_prime_UTR |
| AAGGAACGCCGTATTTCTTC+AGG | 0.327746 | tig0035480:+25058 | None:intergenic |
| GGCAAACACGACGTACTTTC+CGG | 0.330888 | tig0035480:+24909 | None:intergenic |
| TTTCAATTCCTTCAACCTTC+AGG | 0.340231 | tig0035480:+17105 | None:intergenic |
| GGCAAGTTGATTGTCTCTTT+GGG | 0.342939 | tig0035480:-21441 | Msa1454870:CDS |
| TCCTTTATACTCCGTTGCTT+GGG | 0.350058 | tig0035480:-25040 | Msa1454870:CDS |
| AATCATGAGTAAAATTGTTT+GGG | 0.352241 | tig0035480:-16833 | Msa1454870:three_prime_UTR |
| CAAATAATGCCTTCTCCGTT+GGG | 0.363852 | tig0035480:+24315 | None:intergenic |
| TTCCTTTATACTCCGTTGCT+TGG | 0.367492 | tig0035480:-25041 | Msa1454870:CDS |
| ACAATTACAATATCTCCTTC+AGG | 0.370620 | tig0035480:+18164 | None:intergenic |
| TGGAAAAGCCAAAGTGTTGC+AGG | 0.370641 | tig0035480:-24287 | Msa1454870:intron |
| GGAAAGTACGTCGTGTTTGC+CGG | 0.376827 | tig0035480:-24907 | Msa1454870:CDS |
| GAGACATTGAATGCACATAT+TGG | 0.384246 | tig0035480:+19081 | None:intergenic |
| GGCTTCTATATTCAGGGCAT+TGG | 0.384344 | tig0035480:-17983 | Msa1454870:intron |
| CTATATATTGCTGCCAGAAC+AGG | 0.392636 | tig0035480:-19255 | Msa1454870:intron |
| GTTGTCCAACATTATCCAAC+TGG | 0.393760 | tig0035480:+22622 | None:intergenic |
| GCGTCAATTGCTTCCGTCTC+CGG | 0.394671 | tig0035480:+24931 | None:intergenic |
| CTGTTCTGGCAGCAATATAT+AGG | 0.411746 | tig0035480:+19256 | None:intergenic |
| GTCGTGTTTGCCGGTGGCGG+TGG | 0.413598 | tig0035480:-24898 | Msa1454870:CDS |
| TTCTGAGTGGTTGTACCATT+GGG | 0.413763 | tig0035480:-16945 | Msa1454870:three_prime_UTR |
| GGGTGAAGTGCCATTCTATA+AGG | 0.419923 | tig0035480:+24336 | None:intergenic |
| ACAAATAATGCCTTCTCCGT+TGG | 0.423444 | tig0035480:+24314 | None:intergenic |
| GGGAGGTGGCGGCCCCTGCA+GGG | 0.426848 | tig0035480:-21421 | Msa1454870:CDS |
| TCTTCAGGTTCGAAGGGTCT+GGG | 0.434306 | tig0035480:+25073 | None:intergenic |
| ACCCAAGCAACGGAGTATAA+AGG | 0.435918 | tig0035480:+25039 | None:intergenic |
| GGCATTGGCTTCTGTATCCA+TGG | 0.443307 | tig0035480:-17968 | Msa1454870:CDS |
| TTCCGAGTTGCCTTATAGAA+TGG | 0.446113 | tig0035480:-24346 | Msa1454870:CDS |
| ATTCCTAATTCTGTGTTGCT+CGG | 0.447796 | tig0035480:-24859 | Msa1454870:CDS |
| TCATAAATCTTCGCCGGAGA+CGG | 0.463175 | tig0035480:-24944 | Msa1454870:CDS |
| GCTTACTTCCTGAAGGTTGA+AGG | 0.465391 | tig0035480:-17113 | Msa1454870:CDS |
| TTCCTAATTCTGTGTTGCTC+GGG | 0.466232 | tig0035480:-24858 | Msa1454870:CDS |
| TTGATTGTCTCTTTGGGAGG+TGG | 0.468915 | tig0035480:-21435 | Msa1454870:CDS |
| ATTCTGAGTGGTTGTACCAT+TGG | 0.471625 | tig0035480:-16946 | Msa1454870:three_prime_UTR |
| TGTCTGTCTTGCAGTTCTGA+TGG | 0.472254 | tig0035480:-21462 | Msa1454870:intron |
| ATTGTAGAAATATTTACTGC+TGG | 0.478308 | tig0035480:-17057 | Msa1454870:exon |
| GCACATGCAGATGGTTTGAC+TGG | 0.489183 | tig0035480:-22707 | Msa1454870:intron |
| AAAGAAGACCTGCAACACTT+TGG | 0.491375 | tig0035480:+24279 | None:intergenic |
| CCGTATTTCTTCAGGTTCGA+AGG | 0.492140 | tig0035480:+25066 | None:intergenic |
| GAATGCTGAAATTCACAAGT+TGG | 0.497117 | tig0035480:-22673 | Msa1454870:CDS |
| ATATTTCAGGTGTTTAAGCT+AGG | 0.498331 | tig0035480:-24375 | Msa1454870:intron |
| TACGTCGTGTTTGCCGGTGG+CGG | 0.499692 | tig0035480:-24901 | Msa1454870:CDS |
| GCATTGGCATTCAACAATGA+TGG | 0.500116 | tig0035480:-22594 | Msa1454870:CDS |
| CGGGCATTTCGATGTTGCAT+CGG | 0.507244 | tig0035480:-24839 | Msa1454870:CDS |
| AATGCTGAAATTCACAAGTT+GGG | 0.510662 | tig0035480:-22672 | Msa1454870:CDS |
| AATTCACAAGTTGGGTCTGA+AGG | 0.511078 | tig0035480:-22664 | Msa1454870:CDS |
| AGAGAAGCTTCTCACCCAGT+TGG | 0.514272 | tig0035480:-22637 | Msa1454870:CDS |
| TACCCTCGCACTTGAATCCA+TGG | 0.515086 | tig0035480:+17951 | None:intergenic |
| CTCACCCAGTTGGATAATGT+TGG | 0.517477 | tig0035480:-22627 | Msa1454870:CDS |
| TTTATGATCGGCAGCATCGT+CGG | 0.517957 | tig0035480:+24960 | None:intergenic |
| AGAAACATCCCAAACCCTGC+AGG | 0.518415 | tig0035480:+21407 | None:intergenic |
| TTTAAGGAGGAGGACTGAGC+TGG | 0.530683 | tig0035480:-17172 | Msa1454870:intron |
| TCAAACAAAGGATGGGACTC+AGG | 0.539755 | tig0035480:-19280 | Msa1454870:CDS |
| ATTGTCTCTTTGGGAGGTGG+CGG | 0.541675 | tig0035480:-21432 | Msa1454870:CDS |
| CCTTCGAACCTGAAGAAATA+CGG | 0.542571 | tig0035480:-25066 | Msa1454870:CDS |
| GCGGCTATCTCCACCGCCAC+CGG | 0.547245 | tig0035480:+24888 | None:intergenic |
| TGTTGGACAACAATTAGCAT+TGG | 0.547834 | tig0035480:-22610 | Msa1454870:CDS |
| TCATTACAAACCTTGAATCA+GGG | 0.548645 | tig0035480:+18066 | None:intergenic |
| AGAAGGCATTATTTGTGCAA+TGG | 0.551687 | tig0035480:-24307 | Msa1454870:CDS |
| CGTATTTCTTCAGGTTCGAA+GGG | 0.557599 | tig0035480:+25067 | None:intergenic |
| GCACTTCACCCCAACGGAGA+AGG | 0.558496 | tig0035480:-24324 | Msa1454870:CDS |
| AATAGCTGCTTACTTCCTGA+AGG | 0.563268 | tig0035480:-17120 | Msa1454870:CDS |
| TTATACAATCTACAGAGCAT+TGG | 0.565341 | tig0035480:+16906 | None:intergenic |
| GCATTCAATGTCTCAGCTGA+TGG | 0.568791 | tig0035480:-19072 | Msa1454870:CDS |
| CAATGCTCATTCTACTGTGA+AGG | 0.569819 | tig0035480:-21647 | Msa1454870:CDS |
| GAAACATCCCAAACCCTGCA+GGG | 0.570028 | tig0035480:+21408 | None:intergenic |
| CACATGCAGATGGTTTGACT+GGG | 0.572817 | tig0035480:-22706 | Msa1454870:intron |
| GCGATTTGAGAATGGATTGT+GGG | 0.575042 | tig0035480:+25016 | None:intergenic |
| AAGGAGGAGGACTGAGCTGG+TGG | 0.586192 | tig0035480:-17169 | Msa1454870:CDS |
| CATTACAAACCTTGAATCAG+GGG | 0.586918 | tig0035480:+18067 | None:intergenic |
| CTTCACAGTAGAATGAGCAT+TGG | 0.587615 | tig0035480:+21648 | None:intergenic |
| GGATTCTCTCTCTGATCCAC+CGG | 0.588348 | tig0035480:-24818 | Msa1454870:intron |
| TACACTAGCTGCTGGTGGAG+AGG | 0.593622 | tig0035480:-22568 | Msa1454870:intron |
| AGTAAGCAGCTATTGCAAGT+AGG | 0.596054 | tig0035480:+17129 | None:intergenic |
| ATTACAGGATGGCAGTCTAA+GGG | 0.596584 | tig0035480:-21710 | Msa1454870:intron |
| ATATGCAGCGGAACACCTGA+AGG | 0.596958 | tig0035480:-18179 | Msa1454870:intron |
| TGACCTGGAATACACAAACA+TGG | 0.596985 | tig0035480:-19137 | Msa1454870:CDS |
| AAGTACGTCGTGTTTGCCGG+TGG | 0.600942 | tig0035480:-24904 | Msa1454870:CDS |
| GTCGGAGGAATGATCATCAT+CGG | 0.601246 | tig0035480:+24978 | None:intergenic |
| AAGTTGATTGTCTCTTTGGG+AGG | 0.601665 | tig0035480:-21438 | Msa1454870:CDS |
| ATCCATGGATTCAAGTGCGA+GGG | 0.604094 | tig0035480:-17953 | Msa1454870:CDS |
| TGCCGATCATAAATCTTCGC+CGG | 0.604371 | tig0035480:-24950 | Msa1454870:CDS |
| ACTCGACTGTAATTTAGAGA+CGG | 0.609667 | tig0035480:-25220 | Msa1454870:five_prime_UTR |
| GATGGTACTACACTAGCTGC+TGG | 0.619769 | tig0035480:-22576 | Msa1454870:CDS |
| AGCGATTTGAGAATGGATTG+TGG | 0.621404 | tig0035480:+25015 | None:intergenic |
| CTGATGGAAAGTTTCTGGCA+TGG | 0.623936 | tig0035480:-19056 | Msa1454870:intron |
| CTCCGGCGAAGATTTATGAT+CGG | 0.625230 | tig0035480:+24948 | None:intergenic |
| TGCCATTCTATAAGGCAACT+CGG | 0.627739 | tig0035480:+24344 | None:intergenic |
| GGAATACACAAACATGGGAA+AGG | 0.627776 | tig0035480:-19131 | Msa1454870:CDS |
| CTAAAGCAGTTACTACGCCA+AGG | 0.630301 | tig0035480:+18096 | None:intergenic |
| GACTGTAATTTAGAGACGGA+GGG | 0.632487 | tig0035480:-25216 | Msa1454870:five_prime_UTR |
| AAATAATGCCTTCTCCGTTG+GGG | 0.636673 | tig0035480:+24316 | None:intergenic |
| GACCTGGAATACACAAACAT+GGG | 0.637351 | tig0035480:-19136 | Msa1454870:CDS |
| ATGATCGGCAGCATCGTCGG+AGG | 0.640539 | tig0035480:+24963 | None:intergenic |
| CGACTGTAATTTAGAGACGG+AGG | 0.641478 | tig0035480:-25217 | Msa1454870:five_prime_UTR |
| GGATTGTGGGACCCAAGCAA+CGG | 0.641995 | tig0035480:+25029 | None:intergenic |
| TTGTCCAACATTATCCAACT+GGG | 0.643522 | tig0035480:+22623 | None:intergenic |
| AAACATCCCAAACCCTGCAG+GGG | 0.644586 | tig0035480:+21409 | None:intergenic |
| GGCGGTGGAGATAGCCGCAG+TGG | 0.656943 | tig0035480:-24883 | Msa1454870:CDS |
| GAGACGGAAGCAATTGACGC+CGG | 0.659922 | tig0035480:-24928 | Msa1454870:CDS |
| TATCCATGGATTCAAGTGCG+AGG | 0.661757 | tig0035480:-17954 | Msa1454870:CDS |
| GAGACATTATCATATCCCAA+TGG | 0.664860 | tig0035480:+16930 | None:intergenic |
| AGAATGGCACTTCACCCCAA+CGG | 0.669541 | tig0035480:-24330 | Msa1454870:CDS |
| GGTACTACACTAGCTGCTGG+TGG | 0.673466 | tig0035480:-22573 | Msa1454870:CDS |
| GGAGGAATGATCATCATCGG+CGG | 0.741993 | tig0035480:+24981 | None:intergenic |
| CAGAATTAGGAATACCACTG+CGG | 0.790181 | tig0035480:+24869 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTATATATTTTTTA+TGG | - | tig0035480:25186-25205 | Msa1454870:five_prime_UTR | 0.0% |
| !! | TTAAAAAATTTAAGAGTTTA+AGG | - | tig0035480:21953-21972 | Msa1454870:intron | 10.0% |
| !!! | ATAAGTAAATTTTTTTTTGT+AGG | - | tig0035480:22014-22033 | Msa1454870:intron | 10.0% |
| !!! | TAAGTAAATTTTTTTTTGTA+GGG | - | tig0035480:22015-22034 | Msa1454870:intron | 10.0% |
| !! | TTTACTTTATTATAAATGTT+GGG | + | tig0035480:22488-22507 | None:intergenic | 10.0% |
| !!! | TTTTACTTTATTATAAATGT+TGG | + | tig0035480:22489-22508 | None:intergenic | 10.0% |
| !! | TTATTTATTTAATATCATGT+TGG | + | tig0035480:24646-24665 | None:intergenic | 10.0% |
| !! | TAAAATTATCAATGAAATAT+AGG | - | tig0035480:24670-24689 | Msa1454870:intron | 10.0% |
| !!! | TATATATTTTTTATGGAATT+TGG | - | tig0035480:25193-25212 | Msa1454870:five_prime_UTR | 10.0% |
| !! | AAGAAATATATAAAATGTAC+CGG | + | tig0035480:17181-17200 | None:intergenic | 15.0% |
| !! | ACTATTTATATCTTATAGTT+AGG | + | tig0035480:18539-18558 | None:intergenic | 15.0% |
| !! | AAACTATCAATACAATATTA+TGG | + | tig0035480:18871-18890 | None:intergenic | 15.0% |
| !! | TATAGTTAGTTGTAAATATT+AGG | + | tig0035480:19224-19243 | None:intergenic | 15.0% |
| !! | CTTCATTTATATGAATTTAA+AGG | + | tig0035480:19444-19463 | None:intergenic | 15.0% |
| !! | TGAAGTAAAAAGATAATTTA+TGG | - | tig0035480:19503-19522 | Msa1454870:intron | 15.0% |
| !! | ACAAAAATACAAATATCATA+TGG | + | tig0035480:20245-20264 | None:intergenic | 15.0% |
| !! | TATTTAGTCTATATATAAAC+AGG | - | tig0035480:20788-20807 | Msa1454870:intron | 15.0% |
| !!! | TTTTTTTATGATATCCTAAA+GGG | - | tig0035480:21555-21574 | Msa1454870:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | tig0035480:21630-21649 | None:intergenic | 15.0% |
| !! | AAGCATAAATTAAACAAATT+TGG | + | tig0035480:21702-21721 | None:intergenic | 15.0% |
| !!! | TTTTTCAACAATTTTTTTAC+AGG | - | tig0035480:21733-21752 | Msa1454870:intron | 15.0% |
| !! | AGATATAAGTAACAAAAATA+TGG | + | tig0035480:21822-21841 | None:intergenic | 15.0% |
| !!! | TAAACAAAATTTATTTTAGC+AGG | - | tig0035480:21981-22000 | Msa1454870:intron | 15.0% |
| !!! | AAACAAAATTTATTTTAGCA+GGG | - | tig0035480:21982-22001 | Msa1454870:intron | 15.0% |
| !! | AAAGCTATTAAAATTAAGTA+AGG | - | tig0035480:22044-22063 | Msa1454870:intron | 15.0% |
| !! | GTATTAATTAGAATTATGTT+TGG | - | tig0035480:22346-22365 | Msa1454870:intron | 15.0% |
| !!! | TTATTGTTTTGTATAGATAA+AGG | - | tig0035480:22803-22822 | Msa1454870:intron | 15.0% |
| !! | TTGATTTACAGATTTATAAA+TGG | - | tig0035480:24126-24145 | Msa1454870:intron | 15.0% |
| !! | AATAAAAAATTATGAAAGTG+TGG | - | tig0035480:24391-24410 | Msa1454870:intron | 15.0% |
| !!! | ATATGTTTTTTCTTGTTTTA+AGG | - | tig0035480:24789-24808 | Msa1454870:intron | 15.0% |
| !!! | ACAATATTTTGTATTGCATA+AGG | - | tig0035480:17532-17551 | Msa1454870:intron | 20.0% |
| !! | AGTAACTTTATCAATATTTC+AGG | - | tig0035480:17589-17608 | Msa1454870:intron | 20.0% |
| !!! | ACATAAAAAAGGCTATATTT+TGG | + | tig0035480:18151-18170 | None:intergenic | 20.0% |
| !!! | TTTAGGATATAAGATTGAAT+TGG | - | tig0035480:18328-18347 | Msa1454870:intron | 20.0% |
| !! | TGATAGTTTATACTAACAAA+TGG | - | tig0035480:18882-18901 | Msa1454870:intron | 20.0% |
| !! | TTAGTTGTAAATATTAGGTT+GGG | + | tig0035480:19219-19238 | None:intergenic | 20.0% |
| !!! | TTTTATTCTTTGTTCAACTA+AGG | - | tig0035480:19553-19572 | Msa1454870:intron | 20.0% |
| !! | ATGTCTATTACAAATGAATT+GGG | + | tig0035480:19781-19800 | None:intergenic | 20.0% |
| !! | TATGTCTATTACAAATGAAT+TGG | + | tig0035480:19782-19801 | None:intergenic | 20.0% |
| !!! | CAAGTTACAATTTAATTTGT+CGG | + | tig0035480:19991-20010 | None:intergenic | 20.0% |
| !! | TTTCACTTAATTGATACTAT+TGG | - | tig0035480:20392-20411 | Msa1454870:intron | 20.0% |
| !!! | ATAAATCTTGTTATTTCTGA+TGG | - | tig0035480:20472-20491 | Msa1454870:intron | 20.0% |
| !!! | AGAAGTTATTTTTGATTTGA+TGG | - | tig0035480:20660-20679 | Msa1454870:intron | 20.0% |
| !!! | GTTTCAAAACATACTTTTAT+TGG | - | tig0035480:21212-21231 | Msa1454870:intron | 20.0% |
| !!! | TTCATTTGCTTTATATTTTC+TGG | - | tig0035480:21241-21260 | Msa1454870:intron | 20.0% |
| !! | TAATGATGATTGTTACTAAT+TGG | - | tig0035480:21455-21474 | Msa1454870:intron | 20.0% |
| !!! | GTTTTTTTATGATATCCTAA+AGG | - | tig0035480:21554-21573 | Msa1454870:intron | 20.0% |
| !!! | TTTTTTATGATATCCTAAAG+GGG | - | tig0035480:21556-21575 | Msa1454870:intron | 20.0% |
| !! | TGAATACTTCTAAACATAAA+GGG | + | tig0035480:22292-22311 | None:intergenic | 20.0% |
| !! | TTGAATACTTCTAAACATAA+AGG | + | tig0035480:22293-22312 | None:intergenic | 20.0% |
| !!! | ATGTTTAGAAGTATTCAATA+TGG | - | tig0035480:22295-22314 | Msa1454870:intron | 20.0% |
| !!! | TTAATACTACTAATTTGCTT+TGG | + | tig0035480:22333-22352 | None:intergenic | 20.0% |
| !! | GTTCATGAATTCTTTATATT+TGG | - | tig0035480:22388-22407 | Msa1454870:intron | 20.0% |
| !!! | TTTTGTATAGATAAAGGTTT+TGG | - | tig0035480:22809-22828 | Msa1454870:intron | 20.0% |
| !! | TAAGGATTAAATCAATCTAA+GGG | + | tig0035480:23015-23034 | None:intergenic | 20.0% |
| !! | TAAGGATTAAATCAATCTAA+GGG | + | tig0035480:23015-23034 | None:intergenic | 20.0% |
| !! | ATGTTTATTCTTTATTCTTC+TGG | - | tig0035480:23608-23627 | Msa1454870:intron | 20.0% |
| !! | ATAATTGAAGAGAAGAAAAA+TGG | - | tig0035480:24052-24071 | Msa1454870:intron | 20.0% |
| !!! | ATATACAGCAGAATTTTTTT+AGG | + | tig0035480:24573-24592 | None:intergenic | 20.0% |
| !! | GATATATATATTTCCACATT+TGG | - | tig0035480:24706-24725 | Msa1454870:intron | 20.0% |
| !! | AAAAACATATCAGAAACAAT+GGG | + | tig0035480:24779-24798 | None:intergenic | 20.0% |
| !! | AAAAAACATATCAGAAACAA+TGG | + | tig0035480:24780-24799 | None:intergenic | 20.0% |
| !!! | ATTATGGTGTTAAATTGTTA+TGG | - | tig0035480:25093-25112 | Msa1454870:CDS | 20.0% |
| !! | AATCATGAGTAAAATTGTTT+GGG | - | tig0035480:25144-25163 | Msa1454870:five_prime_UTR | 20.0% |
| !!! | AATTTGGTGTAATGATTTTA+TGG | - | tig0035480:25209-25228 | Msa1454870:five_prime_UTR | 20.0% |
| !! | TTTTTCTGTTTGAAAGTGAA+TGG | + | tig0035480:16851-16870 | None:intergenic | 25.0% |
| ! | AAATATATAAAATGTACCGG+TGG | + | tig0035480:17178-17197 | None:intergenic | 25.0% |
| ! | TATTTCTTACGATTCTTGTT+AGG | - | tig0035480:17193-17212 | Msa1454870:intron | 25.0% |
| ! | TGAAAAATGAATAATCTGTG+AGG | - | tig0035480:17247-17266 | Msa1454870:intron | 25.0% |
| ! | GAATTAATTGTTACAATGTG+TGG | - | tig0035480:17329-17348 | Msa1454870:intron | 25.0% |
| ! | AATATGCAACATTAACTATC+TGG | + | tig0035480:17765-17784 | None:intergenic | 25.0% |
| ! | ACAGATAAAGAAAGAAAAGT+TGG | - | tig0035480:17979-17998 | Msa1454870:intron | 25.0% |
| ! | CTAGAAGATCAACATAAAAA+AGG | + | tig0035480:18162-18181 | None:intergenic | 25.0% |
| !!! | CTTTTTTATGTTGATCTTCT+AGG | - | tig0035480:18160-18179 | Msa1454870:CDS | 25.0% |
| ! | ATCTTATATCCTAAAGTACA+GGG | + | tig0035480:18323-18342 | None:intergenic | 25.0% |
| ! | AATCTTATATCCTAAAGTAC+AGG | + | tig0035480:18324-18343 | None:intergenic | 25.0% |
| ! | AAAAAGTTGGATTGACAAAT+CGG | - | tig0035480:18451-18470 | Msa1454870:intron | 25.0% |
| ! | TCTAAAAGTAGTTCATAAGA+AGG | + | tig0035480:18697-18716 | None:intergenic | 25.0% |
| !!! | TTCTTATGAACTACTTTTAG+AGG | - | tig0035480:18696-18715 | Msa1454870:intron | 25.0% |
| !!! | TCTTATGAACTACTTTTAGA+GGG | - | tig0035480:18697-18716 | Msa1454870:intron | 25.0% |
| !! | TTCTTTTGCAATGTTACTAT+TGG | - | tig0035480:18913-18932 | Msa1454870:intron | 25.0% |
| ! | GTCTTATATTTAATCGATGT+GGG | + | tig0035480:18950-18969 | None:intergenic | 25.0% |
| ! | CCATATTAGGTCTTTATATT+TGG | + | tig0035480:19039-19058 | None:intergenic | 25.0% |
| ! | CCAAATATAAAGACCTAATA+TGG | - | tig0035480:19036-19055 | Msa1454870:intron | 25.0% |
| ! | ATAGACTATGATACCATATT+AGG | + | tig0035480:19052-19071 | None:intergenic | 25.0% |
| ! | GTTAGTTGTAAATATTAGGT+TGG | + | tig0035480:19220-19239 | None:intergenic | 25.0% |
| ! | ATTTAACACATGCACTTAAT+AGG | - | tig0035480:19697-19716 | Msa1454870:intron | 25.0% |
| ! | AGTATATGAAAAGTTAATCC+AGG | - | tig0035480:19742-19761 | Msa1454870:intron | 25.0% |
| ! | AAAGTTAATCCAGGTTATAA+TGG | - | tig0035480:19751-19770 | Msa1454870:intron | 25.0% |
| ! | AGGAAATCATATTTGTACTA+TGG | + | tig0035480:19881-19900 | None:intergenic | 25.0% |
| ! | ACAAATCAATCATATATCGA+CGG | + | tig0035480:19935-19954 | None:intergenic | 25.0% |
| ! | CAATTAAAGTTGAAGCAAAA+TGG | + | tig0035480:20065-20084 | None:intergenic | 25.0% |
| !!! | AGGATTTTTTTTCTCTCTAT+AGG | - | tig0035480:20125-20144 | Msa1454870:intron | 25.0% |
| !!! | TTTGTATTTTTGTGCATTAC+AGG | - | tig0035480:20252-20271 | Msa1454870:intron | 25.0% |
| !! | CTTTTCCTTGAAGATTAATT+TGG | - | tig0035480:20708-20727 | Msa1454870:intron | 25.0% |
| !!! | GATTAATTTGGCTTGAAATT+TGG | - | tig0035480:20720-20739 | Msa1454870:intron | 25.0% |
| ! | AGTCTATATATAAACAGGAT+AGG | - | tig0035480:20793-20812 | Msa1454870:intron | 25.0% |
| ! | TATATAAACAGGATAGGATT+AGG | - | tig0035480:20799-20818 | Msa1454870:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | tig0035480:20862-20881 | Msa1454870:intron | 25.0% |
| !! | TTTTCTAATGGTTTCTCTAA+TGG | + | tig0035480:20997-21016 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | tig0035480:21004-21023 | Msa1454870:intron | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | + | tig0035480:21044-21063 | None:intergenic | 25.0% |
| ! | AGATAGATGACTTAATGTTA+TGG | - | tig0035480:21300-21319 | Msa1454870:intron | 25.0% |
| ! | CAAATTTAATCAGTTGAACT+GGG | + | tig0035480:21504-21523 | None:intergenic | 25.0% |
| ! | AAAACATAATTAACCCCTTT+AGG | + | tig0035480:21572-21591 | None:intergenic | 25.0% |
| !! | AAAGGGGTTAATTATGTTTT+TGG | - | tig0035480:21572-21591 | Msa1454870:intron | 25.0% |
| ! | AAACAAATTTGGATTGAGTA+AGG | + | tig0035480:21691-21710 | None:intergenic | 25.0% |
| !! | GATAGGGTTAAATATGTTTT+TGG | + | tig0035480:22102-22121 | None:intergenic | 25.0% |
| !!! | TTTTAGGTTACTTTAGGATA+GGG | + | tig0035480:22118-22137 | None:intergenic | 25.0% |
| !!! | TTTTTAGGTTACTTTAGGAT+AGG | + | tig0035480:22119-22138 | None:intergenic | 25.0% |
| ! | TATCCTAAAGTAACCTAAAA+AGG | - | tig0035480:22118-22137 | Msa1454870:intron | 25.0% |
| !!! | ATACCTTTTTAGGTTACTTT+AGG | + | tig0035480:22124-22143 | None:intergenic | 25.0% |
| ! | TAAAGAATTCATGAACATGT+TGG | + | tig0035480:22384-22403 | None:intergenic | 25.0% |
| !! | TCTTTCTTTTAACATCTAGT+TGG | - | tig0035480:22509-22528 | Msa1454870:intron | 25.0% |
| ! | AATCTAAGGGTCAATAATTA+GGG | + | tig0035480:23002-23021 | None:intergenic | 25.0% |
| ! | GTAAGGATTAAATCAATCTA+AGG | + | tig0035480:23016-23035 | None:intergenic | 25.0% |
| ! | AAAAAATCTAGCAATGTGTA+GGG | + | tig0035480:23053-23072 | None:intergenic | 25.0% |
| ! | AAAAAAATCTAGCAATGTGT+AGG | + | tig0035480:23054-23073 | None:intergenic | 25.0% |
| ! | GATGCAATATTTAGATCTAT+AGG | + | tig0035480:23137-23156 | None:intergenic | 25.0% |
| ! | AATCTAAGGGTCAATAATTA+GGG | + | tig0035480:23002-23021 | None:intergenic | 25.0% |
| ! | GTAAGGATTAAATCAATCTA+AGG | + | tig0035480:23016-23035 | None:intergenic | 25.0% |
| ! | AAAAAATCTTGCAATGTGTA+GGG | + | tig0035480:23291-23310 | None:intergenic | 25.0% |
| ! | AAAAAAATCTTGCAATGTGT+AGG | + | tig0035480:23292-23311 | None:intergenic | 25.0% |
| ! | AATGTAAACAGAAAAACTGT+CGG | + | tig0035480:23108-23127 | None:intergenic | 25.0% |
| ! | GATGCAATATTTAGATCTAT+AGG | + | tig0035480:23137-23156 | None:intergenic | 25.0% |
| ! | GGACAATTATTATTCACTAT+TGG | + | tig0035480:23544-23563 | None:intergenic | 25.0% |
| ! | GTAGCTTAAAAAAAAGACAA+TGG | + | tig0035480:23648-23667 | None:intergenic | 25.0% |
| !!! | GAAACTTACATCTTTTGTTT+TGG | - | tig0035480:23768-23787 | Msa1454870:intron | 25.0% |
| ! | GATTCAGACAATGATAAAAA+AGG | - | tig0035480:23854-23873 | Msa1454870:intron | 25.0% |
| !!! | AGGTATTTTAGTCATAGTTT+TGG | - | tig0035480:23973-23992 | Msa1454870:intron | 25.0% |
| ! | GTATTTAAAAGGATTCCATA+GGG | - | tig0035480:24240-24259 | Msa1454870:intron | 25.0% |
| !!! | TTCCTTATTTTTCTATCCAT+TGG | - | tig0035480:24275-24294 | Msa1454870:intron | 25.0% |
| ! | GAAGTAGCTTAAGTAAAATA+CGG | - | tig0035480:24338-24357 | Msa1454870:CDS | 25.0% |
| ! | AAAACATATCAGAAACAATG+GGG | + | tig0035480:24778-24797 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCTTGTTTTAAGG+AGG | - | tig0035480:24792-24811 | Msa1454870:intron | 25.0% |
| ! | ATTGTAGAAATATTTACTGC+TGG | - | tig0035480:24920-24939 | Msa1454870:CDS | 25.0% |
| !!! | TTTGAAGCATTTCCATTTTT+GGG | - | tig0035480:24974-24993 | Msa1454870:CDS | 25.0% |
| ! | CTCTGTAGATTGTATAATTA+TGG | - | tig0035480:25077-25096 | Msa1454870:CDS | 25.0% |
| ! | CAATCATGAGTAAAATTGTT+TGG | - | tig0035480:25143-25162 | Msa1454870:five_prime_UTR | 25.0% |
| !! | AATTGTTTGGGATATCAATT+TGG | - | tig0035480:25156-25175 | Msa1454870:five_prime_UTR | 25.0% |
| ACGAAATGGCATATAATTGA+GGG | + | tig0035480:17440-17459 | None:intergenic | 30.0% | |
| TTGTGTAAACTCAATGTTAG+TGG | - | tig0035480:17501-17520 | Msa1454870:intron | 30.0% | |
| ! | ATATTTCAGGTGTTTAAGCT+AGG | - | tig0035480:17602-17621 | Msa1454870:intron | 30.0% |
| ! | TATCTGTGTTTCTGATAACT+TGG | + | tig0035480:17966-17985 | None:intergenic | 30.0% |
| !! | CATGGATTTTATTTCTCTGT+TGG | + | tig0035480:18045-18064 | None:intergenic | 30.0% |
| ! | TTTATGTTGATCTTCTAGGA+TGG | - | tig0035480:18164-18183 | Msa1454870:CDS | 30.0% |
| !! | TTATGTTGATCTTCTAGGAT+GGG | - | tig0035480:18165-18184 | Msa1454870:CDS | 30.0% |
| AGTTCTATAACACTATCACT+AGG | - | tig0035480:18269-18288 | Msa1454870:intron | 30.0% | |
| ACATCTTACAATACACACTA+CGG | + | tig0035480:18398-18417 | None:intergenic | 30.0% | |
| TCGCTGTGTTTATTTATCAA+AGG | - | tig0035480:18568-18587 | Msa1454870:intron | 30.0% | |
| !!! | AAAGGCAGTTTTATTGTTGA+CGG | - | tig0035480:18586-18605 | Msa1454870:intron | 30.0% |
| AGAAGGAAAAGAAAAGTAGA+AGG | + | tig0035480:18680-18699 | None:intergenic | 30.0% | |
| AGGAAATACAATGAGTTAGA+AGG | - | tig0035480:18819-18838 | Msa1454870:intron | 30.0% | |
| ! | GGTCTTATATTTAATCGATG+TGG | + | tig0035480:18951-18970 | None:intergenic | 30.0% |
| CTAACTCATCCTTACAAAAT+TGG | + | tig0035480:19015-19034 | None:intergenic | 30.0% | |
| TGAGTAGAGTTTATAAAGAG+TGG | - | tig0035480:19151-19170 | Msa1454870:CDS | 30.0% | |
| CTAACTCATCCTTACAAAAA+TGG | + | tig0035480:19195-19214 | None:intergenic | 30.0% | |
| ! | CATTTTTGTAAGGATGAGTT+AGG | - | tig0035480:19193-19212 | Msa1454870:intron | 30.0% |
| AATGCTGAAATTCACAAGTT+GGG | - | tig0035480:19305-19324 | Msa1454870:CDS | 30.0% | |
| AAGAAGATTCTGATGTAAGT+AGG | - | tig0035480:19655-19674 | Msa1454870:intron | 30.0% | |
| ! | TTGTAACTTGTAGCTTCAAA+AGG | - | tig0035480:20001-20020 | Msa1454870:intron | 30.0% |
| AAATGGAACAGCAACATAAA+AGG | + | tig0035480:20048-20067 | None:intergenic | 30.0% | |
| TTGCTTCAACTTTAATTGTG+TGG | - | tig0035480:20067-20086 | Msa1454870:intron | 30.0% | |
| !! | TATTTTTGTGCATTACAGGA+TGG | - | tig0035480:20256-20275 | Msa1454870:intron | 30.0% |
| ! | TTGAGAATATTTTCCATGCT+AGG | + | tig0035480:20304-20323 | None:intergenic | 30.0% |
| ATTGGACTTAATAATTCCCA+AGG | - | tig0035480:20410-20429 | Msa1454870:intron | 30.0% | |
| !! | CTCAACTTTTTCTTTTCCTT+GGG | + | tig0035480:20429-20448 | None:intergenic | 30.0% |
| !! | TCTCAACTTTTTCTTTTCCT+TGG | + | tig0035480:20430-20449 | None:intergenic | 30.0% |
| GGAAAAGAAAAAGTTGAGAA+AGG | - | tig0035480:20431-20450 | Msa1454870:intron | 30.0% | |
| TGAGAAAGGATAATAGATAG+AGG | - | tig0035480:20445-20464 | Msa1454870:intron | 30.0% | |
| !! | TTGTTATTTCTGATGGATTG+TGG | - | tig0035480:20479-20498 | Msa1454870:intron | 30.0% |
| AATAACTTCTTACACTAGTG+AGG | + | tig0035480:20650-20669 | None:intergenic | 30.0% | |
| TCAAGCCAAATTAATCTTCA+AGG | + | tig0035480:20716-20735 | None:intergenic | 30.0% | |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | tig0035480:20858-20877 | None:intergenic | 30.0% |
| TTGATCTACTCTTCTTACAA+CGG | + | tig0035480:20928-20947 | None:intergenic | 30.0% | |
| TGTAAGAAGAGTAGATCAAA+TGG | - | tig0035480:20929-20948 | Msa1454870:intron | 30.0% | |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | + | tig0035480:20987-21006 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | tig0035480:21009-21028 | None:intergenic | 30.0% |
| ! | TGGTTTTTGATAGAACACTA+TGG | - | tig0035480:21048-21067 | Msa1454870:intron | 30.0% |
| CTATCTATGAAAGAACATGT+AGG | + | tig0035480:21286-21305 | None:intergenic | 30.0% | |
| TGCAAAATGAGTCAAGTTTA+GGG | + | tig0035480:21425-21444 | None:intergenic | 30.0% | |
| ATGCAAAATGAGTCAAGTTT+AGG | + | tig0035480:21426-21445 | None:intergenic | 30.0% | |
| GCAAATTTAATCAGTTGAAC+TGG | + | tig0035480:21505-21524 | None:intergenic | 30.0% | |
| GTTCAACTGATTAAATTTGC+TGG | - | tig0035480:21505-21524 | Msa1454870:intron | 30.0% | |
| ! | TACAAGGTTGCAATTTTGTA+GGG | + | tig0035480:21599-21618 | None:intergenic | 30.0% |
| ! | TTACAAGGTTGCAATTTTGT+AGG | + | tig0035480:21600-21619 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | + | tig0035480:21615-21634 | None:intergenic | 30.0% | |
| !!! | GAGTGCAGAAATTTTTTGTA+GGG | + | tig0035480:21659-21678 | None:intergenic | 30.0% |
| !!! | TGAGTGCAGAAATTTTTTGT+AGG | + | tig0035480:21660-21679 | None:intergenic | 30.0% |
| !!! | TTTTGCGATATTTTTTTCGC+AGG | + | tig0035480:21784-21803 | None:intergenic | 30.0% |
| ! | CAAGTTTAGAACACTATGAA+AGG | + | tig0035480:21919-21938 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTAGA+AGG | - | tig0035480:22059-22078 | Msa1454870:intron | 30.0% | |
| ! | TTAGAAGGTCGCAATTTTAT+AGG | - | tig0035480:22074-22093 | Msa1454870:intron | 30.0% |
| ! | TAGAAGGTCGCAATTTTATA+GGG | - | tig0035480:22075-22094 | Msa1454870:intron | 30.0% |
| ! | GTAACCTAAAAAGGTATAGA+AGG | - | tig0035480:22127-22146 | Msa1454870:intron | 30.0% |
| ! | TTCACCTTCTATACCTTTTT+AGG | + | tig0035480:22134-22153 | None:intergenic | 30.0% |
| ! | AAAAGGTATAGAAGGTGAAT+TGG | - | tig0035480:22135-22154 | Msa1454870:intron | 30.0% |
| !! | GTTGTTGGCTCTAAAATATT+TGG | + | tig0035480:22208-22227 | None:intergenic | 30.0% |
| ATACTTCAACGTGAATGTTT+AGG | + | tig0035480:22422-22441 | None:intergenic | 30.0% | |
| AAACATTCACGTTGAAGTAT+TGG | - | tig0035480:22422-22441 | Msa1454870:intron | 30.0% | |
| ! | AACATTCACGTTGAAGTATT+GGG | - | tig0035480:22423-22442 | Msa1454870:intron | 30.0% |
| GAAAAAATTCTTACTGCCTT+GGG | - | tig0035480:22531-22550 | Msa1454870:intron | 30.0% | |
| AAAACATGGAAATCATATCG+AGG | + | tig0035480:22576-22595 | None:intergenic | 30.0% | |
| ! | TTGCAGATTTTCTCAAACAA+AGG | - | tig0035480:22685-22704 | Msa1454870:CDS | 30.0% |
| ! | AGATTTTCTCAAACAAAGGA+TGG | - | tig0035480:22689-22708 | Msa1454870:CDS | 30.0% |
| ! | GATTTTCTCAAACAAAGGAT+GGG | - | tig0035480:22690-22709 | Msa1454870:CDS | 30.0% |
| TGCAAAATATATACCTGTTC+TGG | + | tig0035480:22738-22757 | None:intergenic | 30.0% | |
| CATGGTACATATTTAGACTT+TGG | - | tig0035480:22939-22958 | Msa1454870:intron | 30.0% | |
| TACATATTTAGACTTTGGCT+CGG | - | tig0035480:22944-22963 | Msa1454870:intron | 30.0% | |
| CAATCTAAGGGTCAATAATT+AGG | + | tig0035480:23003-23022 | None:intergenic | 30.0% | |
| GGGTACATAATATCATTGTA+AGG | + | tig0035480:23033-23052 | None:intergenic | 30.0% | |
| CAATCTAAGGGTCAATAATT+AGG | + | tig0035480:23003-23022 | None:intergenic | 30.0% | |
| GGGTACATAATATCATTGTA+AGG | + | tig0035480:23033-23052 | None:intergenic | 30.0% | |
| ! | AGAGAGTTGTTTAGAGATTT+TGG | - | tig0035480:23469-23488 | Msa1454870:intron | 30.0% |
| ! | GAGAGTTGTTTAGAGATTTT+GGG | - | tig0035480:23470-23489 | Msa1454870:intron | 30.0% |
| !! | TAAACATGTAGCTGTTTCTA+TGG | + | tig0035480:23595-23614 | None:intergenic | 30.0% |
| ! | AAGTGATGACTTAACTTTTG+TGG | - | tig0035480:23712-23731 | Msa1454870:intron | 30.0% |
| !!! | ACTTACATCTTTTGTTTTGG+TGG | - | tig0035480:23771-23790 | Msa1454870:intron | 30.0% |
| ACAATTACAATATCTCCTTC+AGG | + | tig0035480:23816-23835 | None:intergenic | 30.0% | |
| TCATTACAAACCTTGAATCA+GGG | + | tig0035480:23914-23933 | None:intergenic | 30.0% | |
| TTCATTACAAACCTTGAATC+AGG | + | tig0035480:23915-23934 | None:intergenic | 30.0% | |
| !!! | TAGTTTTGGCTTCTATATTC+AGG | - | tig0035480:23987-24006 | Msa1454870:intron | 30.0% |
| !!! | AGTTTTGGCTTCTATATTCA+GGG | - | tig0035480:23988-24007 | Msa1454870:intron | 30.0% |
| TGTAAATCAAGAACATGTGT+TGG | + | tig0035480:24116-24135 | None:intergenic | 30.0% | |
| GATAGGAAAAAAGGATTACA+TGG | + | tig0035480:24172-24191 | None:intergenic | 30.0% | |
| TATTAAATCACCAGACTGAT+AGG | + | tig0035480:24189-24208 | None:intergenic | 30.0% | |
| GGTATTTAAAAGGATTCCAT+AGG | - | tig0035480:24239-24258 | Msa1454870:intron | 30.0% | |
| CTCCAATGGATAGAAAAATA+AGG | + | tig0035480:24280-24299 | None:intergenic | 30.0% | |
| !! | CTTATTTTTCTATCCATTGG+AGG | - | tig0035480:24278-24297 | Msa1454870:intron | 30.0% |
| TAAGTAAAATACGGTAGCAT+TGG | - | tig0035480:24347-24366 | Msa1454870:CDS | 30.0% | |
| TTTCATACACTACTACCAAA+TGG | + | tig0035480:24437-24456 | None:intergenic | 30.0% | |
| AACAGTCTAATACTAACATC+AGG | + | tig0035480:24509-24528 | None:intergenic | 30.0% | |
| !! | AATGAGTCAACTTTTTCTGT+TGG | - | tig0035480:24595-24614 | Msa1454870:intron | 30.0% |
| !!! | TTTTTCTTGTTTTAAGGAGG+AGG | - | tig0035480:24795-24814 | Msa1454870:intron | 30.0% |
| CAAAAATGGAAATGCTTCAA+AGG | + | tig0035480:24975-24994 | None:intergenic | 30.0% | |
| !!! | CTTTGAAGCATTTCCATTTT+TGG | - | tig0035480:24973-24992 | Msa1454870:CDS | 30.0% |
| !! | TTGAAGCATTTCCATTTTTG+GGG | - | tig0035480:24975-24994 | Msa1454870:CDS | 30.0% |
| ! | TGTATTTTCATCATTCTGAG+TGG | - | tig0035480:25019-25038 | Msa1454870:CDS | 30.0% |
| TTATACAATCTACAGAGCAT+TGG | + | tig0035480:25074-25093 | None:intergenic | 30.0% | |
| ! | AAACTTTTCAAACGCGAGAA+TGG | - | tig0035480:16868-16887 | Msa1454870:three_prime_UTR | 35.0% |
| ! | AACTTTTCAAACGCGAGAAT+GGG | - | tig0035480:16869-16888 | Msa1454870:three_prime_UTR | 35.0% |
| !!! | GTTTTGAAGCGATTTGAGAA+TGG | + | tig0035480:16972-16991 | None:intergenic | 35.0% |
| ! | ATTCCTAATTCTGTGTTGCT+CGG | - | tig0035480:17118-17137 | Msa1454870:CDS | 35.0% |
| ATCTGTGAGGTTAGATGAAT+TGG | - | tig0035480:17260-17279 | Msa1454870:intron | 35.0% | |
| AATTGGATCTGAGCTTGATT+AGG | - | tig0035480:17277-17296 | Msa1454870:intron | 35.0% | |
| TATGGAACACTCACACATAT+CGG | + | tig0035480:17401-17420 | None:intergenic | 35.0% | |
| GACGAAATGGCATATAATTG+AGG | + | tig0035480:17441-17460 | None:intergenic | 35.0% | |
| ! | ATATGCCATTTCGTCAAATG+CGG | - | tig0035480:17446-17465 | Msa1454870:intron | 35.0% |
| !! | AGAAGGCATTATTTGTGCAA+TGG | - | tig0035480:17670-17689 | Msa1454870:intron | 35.0% |
| !! | TATTTTGAATGAGTGAAGCC+AGG | - | tig0035480:17781-17800 | Msa1454870:intron | 35.0% |
| GTGTGTGTTTATTCGAGTAT+GGG | + | tig0035480:17837-17856 | None:intergenic | 35.0% | |
| TGTGTGTGTTTATTCGAGTA+TGG | + | tig0035480:17838-17857 | None:intergenic | 35.0% | |
| CAATTCTGTTCAAACTAGTC+TGG | + | tig0035480:17924-17943 | None:intergenic | 35.0% | |
| AAGTTGGATCACGAATTCAA+TGG | - | tig0035480:17995-18014 | Msa1454870:intron | 35.0% | |
| GTATGTTGAAGAACTTCATG+AGG | - | tig0035480:18103-18122 | Msa1454870:CDS | 35.0% | |
| TATACTTTATTAGCTGCACG+TGG | - | tig0035480:18225-18244 | Msa1454870:intron | 35.0% | |
| GTGTTATAGAACTAAGTGAC+TGG | + | tig0035480:18262-18281 | None:intergenic | 35.0% | |
| TATCTTCTACCCTGTACTTT+AGG | - | tig0035480:18311-18330 | Msa1454870:intron | 35.0% | |
| TAAATACCAGGCAGTCTATT+TGG | + | tig0035480:18365-18384 | None:intergenic | 35.0% | |
| GGTTGGAATTACTAAATACC+AGG | + | tig0035480:18377-18396 | None:intergenic | 35.0% | |
| !! | AATCCAACTTTTTCCAATGC+TGG | + | tig0035480:18444-18463 | None:intergenic | 35.0% |
| TAGATTAGATCGCTGATAAC+TGG | + | tig0035480:18499-18518 | None:intergenic | 35.0% | |
| !! | ATGAACTACTTTTAGAGGGT+TGG | - | tig0035480:18701-18720 | Msa1454870:intron | 35.0% |
| CCACTAGCTAAATGAAAGTA+CGG | - | tig0035480:18779-18798 | Msa1454870:intron | 35.0% | |
| ! | CACTAGCTAAATGAAAGTAC+GGG | - | tig0035480:18780-18799 | Msa1454870:intron | 35.0% |
| AATGAGTTAGAAGGCAGTTA+AGG | - | tig0035480:18828-18847 | Msa1454870:intron | 35.0% | |
| TATTTAATCGATGTGGGAGT+TGG | + | tig0035480:18944-18963 | None:intergenic | 35.0% | |
| TGACTAGAGTTTAGAAAGAG+CGG | - | tig0035480:18971-18990 | Msa1454870:intron | 35.0% | |
| !! | AAAATTGGCTTGTAAGGTGA+GGG | + | tig0035480:19000-19019 | None:intergenic | 35.0% |
| !! | CCTTACAAAATTGGCTTGTA+AGG | + | tig0035480:19006-19025 | None:intergenic | 35.0% |
| ! | CCTTACAAGCCAATTTTGTA+AGG | - | tig0035480:19003-19022 | Msa1454870:intron | 35.0% |
| ! | GGTATCATAGTCTATCGATT+TGG | - | tig0035480:19057-19076 | Msa1454870:CDS | 35.0% |
| CATGCGTGTATATAAATGGT+GGG | + | tig0035480:19086-19105 | None:intergenic | 35.0% | |
| TCATGCGTGTATATAAATGG+TGG | + | tig0035480:19087-19106 | None:intergenic | 35.0% | |
| GCTTCATGCGTGTATATAAA+TGG | + | tig0035480:19090-19109 | None:intergenic | 35.0% | |
| ! | AAAAATGGCTTGTAAGGTGA+GGG | + | tig0035480:19180-19199 | None:intergenic | 35.0% |
| ! | CCTTACAAAAATGGCTTGTA+AGG | + | tig0035480:19186-19205 | None:intergenic | 35.0% |
| !!! | CCTTACAAGCCATTTTTGTA+AGG | - | tig0035480:19183-19202 | Msa1454870:intron | 35.0% |
| GAATGCTGAAATTCACAAGT+TGG | - | tig0035480:19304-19323 | Msa1454870:CDS | 35.0% | |
| TTGTCCAACATTATCCAACT+GGG | + | tig0035480:19357-19376 | None:intergenic | 35.0% | |
| TGTTGGACAACAATTAGCAT+TGG | - | tig0035480:19367-19386 | Msa1454870:intron | 35.0% | |
| GAAGGACGAAAAAAATAGCT+TGG | + | tig0035480:19603-19622 | None:intergenic | 35.0% | |
| TGAAGATTCCACATTCGTAA+CGG | + | tig0035480:19633-19652 | None:intergenic | 35.0% | |
| AAGTAGGTAGTAGTATCACA+AGG | - | tig0035480:19671-19690 | Msa1454870:intron | 35.0% | |
| AACCAAAGTATATTCCCACT+AGG | + | tig0035480:19833-19852 | None:intergenic | 35.0% | |
| ! | TTCTGAAGATTCAGCCTAAA+TGG | - | tig0035480:19958-19977 | Msa1454870:intron | 35.0% |
| TCTGAAGATTCAGCCTAAAT+GGG | - | tig0035480:19959-19978 | Msa1454870:intron | 35.0% | |
| CCTCAAGCAAGAAAAACAAA+AGG | + | tig0035480:20108-20127 | None:intergenic | 35.0% | |
| !!! | CCTTTTGTTTTTCTTGCTTG+AGG | - | tig0035480:20105-20124 | Msa1454870:intron | 35.0% |
| ATAGGATAGTAATTGCACCA+TGG | - | tig0035480:20143-20162 | Msa1454870:intron | 35.0% | |
| !!! | ACTGTAATTTTGAAACGCCA+TGG | + | tig0035480:20163-20182 | None:intergenic | 35.0% |
| AGCACCTATAGTAGAAAAGT+TGG | - | tig0035480:20851-20870 | Msa1454870:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | tig0035480:20871-20890 | Msa1454870:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | tig0035480:20876-20895 | Msa1454870:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | - | tig0035480:20932-20951 | Msa1454870:intron | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | tig0035480:21016-21035 | Msa1454870:intron | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | tig0035480:21028-21047 | Msa1454870:intron | 35.0% |
| ! | TAGTAGATGACATGTTGACT+TGG | - | tig0035480:21349-21368 | Msa1454870:intron | 35.0% |
| !! | TTAAATTTGCTGGTCTACTC+TGG | - | tig0035480:21515-21534 | Msa1454870:intron | 35.0% |
| !! | GAGTTGATGGGTGAAATAAA+GGG | - | tig0035480:22166-22185 | Msa1454870:intron | 35.0% |
| !! | AGTTGATGGGTGAAATAAAG+GGG | - | tig0035480:22167-22186 | Msa1454870:intron | 35.0% |
| ATATGCGAAATATGCAGTCA+GGG | + | tig0035480:22257-22276 | None:intergenic | 35.0% | |
| AATATGCGAAATATGCAGTC+AGG | + | tig0035480:22258-22277 | None:intergenic | 35.0% | |
| GGAAAAAATTCTTACTGCCT+TGG | - | tig0035480:22530-22549 | Msa1454870:intron | 35.0% | |
| ! | AATCAACAGCACTGAAAACA+TGG | + | tig0035480:22590-22609 | None:intergenic | 35.0% |
| GAGACATTGAATGCACATAT+TGG | + | tig0035480:22899-22918 | None:intergenic | 35.0% | |
| ! | AGTTGTTTAGAGATTTTGGG+AGG | - | tig0035480:23473-23492 | Msa1454870:intron | 35.0% |
| TCTGTAAAAATGCACTCTTG+AGG | + | tig0035480:23750-23769 | None:intergenic | 35.0% | |
| ATGATAAAAAAGGCTCACCT+TGG | - | tig0035480:23864-23883 | Msa1454870:intron | 35.0% | |
| CATTACAAACCTTGAATCAG+GGG | + | tig0035480:23913-23932 | None:intergenic | 35.0% | |
| ACTGTTTATGCTCTGTTTGA+AGG | - | tig0035480:23953-23972 | Msa1454870:intron | 35.0% | |
| !!! | ATCCTTTTTTCCTATCAGTC+TGG | - | tig0035480:24176-24195 | Msa1454870:intron | 35.0% |
| TATAAATCATCACCACGTTC+AGG | + | tig0035480:24462-24481 | None:intergenic | 35.0% | |
| AGCATGTCTGTCTTTATAGA+TGG | - | tig0035480:24543-24562 | Msa1454870:intron | 35.0% | |
| ATCGATGAAACATCCAAATG+TGG | + | tig0035480:24722-24741 | None:intergenic | 35.0% | |
| ! | TTCATCGATTGTGTATCAAG+TGG | - | tig0035480:24733-24752 | Msa1454870:intron | 35.0% |
| TTTCAATTCCTTCAACCTTC+AGG | + | tig0035480:24875-24894 | None:intergenic | 35.0% | |
| !! | TGAAGCATTTCCATTTTTGG+GGG | - | tig0035480:24976-24995 | Msa1454870:CDS | 35.0% |
| GAGACATTATCATATCCCAA+TGG | + | tig0035480:25050-25069 | None:intergenic | 35.0% | |
| GACTGTAATTTAGAGACGGA+GGG | - | tig0035480:16761-16780 | Msa1454870:three_prime_UTR | 40.0% | |
| ! | ACTTTTCAAACGCGAGAATG+GGG | - | tig0035480:16870-16889 | Msa1454870:three_prime_UTR | 40.0% |
| ! | CGTATTTCTTCAGGTTCGAA+GGG | + | tig0035480:16913-16932 | None:intergenic | 40.0% |
| CCTTCGAACCTGAAGAAATA+CGG | - | tig0035480:16911-16930 | Msa1454870:three_prime_UTR | 40.0% | |
| TTCCTTTATACTCCGTTGCT+TGG | - | tig0035480:16936-16955 | Msa1454870:three_prime_UTR | 40.0% | |
| TCCTTTATACTCCGTTGCTT+GGG | - | tig0035480:16937-16956 | Msa1454870:three_prime_UTR | 40.0% | |
| !! | GCGATTTGAGAATGGATTGT+GGG | + | tig0035480:16964-16983 | None:intergenic | 40.0% |
| !! | AGCGATTTGAGAATGGATTG+TGG | + | tig0035480:16965-16984 | None:intergenic | 40.0% |
| CAGAATTAGGAATACCACTG+CGG | + | tig0035480:17111-17130 | None:intergenic | 40.0% | |
| ! | TTCCTAATTCTGTGTTGCTC+GGG | - | tig0035480:17119-17138 | Msa1454870:CDS | 40.0% |
| ! | TGTGGAATCTGTTCTAGCTA+CGG | - | tig0035480:17347-17366 | Msa1454870:intron | 40.0% |
| ATTCACCGCATTTGACGAAA+TGG | + | tig0035480:17454-17473 | None:intergenic | 40.0% | |
| TTCCGAGTTGCCTTATAGAA+TGG | - | tig0035480:17631-17650 | Msa1454870:intron | 40.0% | |
| TGCCATTCTATAAGGCAACT+CGG | + | tig0035480:17636-17655 | None:intergenic | 40.0% | |
| AAATAATGCCTTCTCCGTTG+GGG | + | tig0035480:17664-17683 | None:intergenic | 40.0% | |
| CAAATAATGCCTTCTCCGTT+GGG | + | tig0035480:17665-17684 | None:intergenic | 40.0% | |
| ACAAATAATGCCTTCTCCGT+TGG | + | tig0035480:17666-17685 | None:intergenic | 40.0% | |
| AAAGAAGACCTGCAACACTT+TGG | + | tig0035480:17701-17720 | None:intergenic | 40.0% | |
| CCAATAGCGAAAAAAATGCC+TGG | + | tig0035480:17802-17821 | None:intergenic | 40.0% | |
| !!! | CCAGGCATTTTTTTCGCTAT+TGG | - | tig0035480:17799-17818 | Msa1454870:intron | 40.0% |
| !!! | TTTTTTCGCTATTGGCCTAG+TGG | - | tig0035480:17807-17826 | Msa1454870:intron | 40.0% |
| GTGTTTATTCGAGTATGGGT+AGG | + | tig0035480:17833-17852 | None:intergenic | 40.0% | |
| TCGAATAAACACACACACAC+AGG | - | tig0035480:17841-17860 | Msa1454870:intron | 40.0% | |
| AATAAACACACACACACAGG+AGG | - | tig0035480:17844-17863 | Msa1454870:intron | 40.0% | |
| ATAAACACACACACACAGGA+GGG | - | tig0035480:17845-17864 | Msa1454870:intron | 40.0% | |
| GTGGTTACATCCTAATGGTT+TGG | + | tig0035480:17888-17907 | None:intergenic | 40.0% | |
| AGACAGCTACTCATACTTCA+TGG | + | tig0035480:18063-18082 | None:intergenic | 40.0% | |
| AGTAGCTGTCTAGTATGTTG+AGG | - | tig0035480:18072-18091 | Msa1454870:intron | 40.0% | |
| GATAAACCAAATAGACTGCC+TGG | - | tig0035480:18356-18375 | Msa1454870:intron | 40.0% | |
| CTTACAATACACACTACGGT+TGG | + | tig0035480:18394-18413 | None:intergenic | 40.0% | |
| !! | GATTTTGATCTAGCCAGCAT+TGG | - | tig0035480:18428-18447 | Msa1454870:intron | 40.0% |
| ! | TAGCCAGCATTGGAAAAAGT+TGG | - | tig0035480:18438-18457 | Msa1454870:intron | 40.0% |
| GCAAGCAATGTTCTTCAATG+TGG | - | tig0035480:18631-18650 | Msa1454870:intron | 40.0% | |
| !! | CATGTTCTGGGAATTTACAG+TGG | + | tig0035480:18748-18767 | None:intergenic | 40.0% |
| CCGTACTTTCATTTAGCTAG+TGG | + | tig0035480:18782-18801 | None:intergenic | 40.0% | |
| GCTCTTTCTAAACTCTAGTC+AGG | + | tig0035480:18972-18991 | None:intergenic | 40.0% | |
| !! | AAATTGGCTTGTAAGGTGAG+GGG | + | tig0035480:18999-19018 | None:intergenic | 40.0% |
| !! | CAAAATTGGCTTGTAAGGTG+AGG | + | tig0035480:19001-19020 | None:intergenic | 40.0% |
| ! | AAAATGGCTTGTAAGGTGAG+GGG | + | tig0035480:19179-19198 | None:intergenic | 40.0% |
| ! | CAAAAATGGCTTGTAAGGTG+AGG | + | tig0035480:19181-19200 | None:intergenic | 40.0% |
| ! | AATTCACAAGTTGGGTCTGA+AGG | - | tig0035480:19313-19332 | Msa1454870:intron | 40.0% |
| GTTGTCCAACATTATCCAAC+TGG | + | tig0035480:19358-19377 | None:intergenic | 40.0% | |
| ! | GCATTGGCATTCAACAATGA+TGG | - | tig0035480:19383-19402 | Msa1454870:intron | 40.0% |
| ATTCGTAACGGTTTGACTGA+AGG | + | tig0035480:19621-19640 | None:intergenic | 40.0% | |
| TTGGGCTTACCATTATAACC+TGG | + | tig0035480:19763-19782 | None:intergenic | 40.0% | |
| GGGACAAACAAATGGTTACA+CGG | + | tig0035480:19806-19825 | None:intergenic | 40.0% | |
| AGTATATTCCCACTAGGTCA+GGG | + | tig0035480:19827-19846 | None:intergenic | 40.0% | |
| AAGTATATTCCCACTAGGTC+AGG | + | tig0035480:19828-19847 | None:intergenic | 40.0% | |
| GACCTAGTGGGAATATACTT+TGG | - | tig0035480:19828-19847 | Msa1454870:intron | 40.0% | |
| GGTTCGTGTTAACAGATACA+AGG | + | tig0035480:19901-19920 | None:intergenic | 40.0% | |
| ! | ATATCGACGGCAATGTTTTC+AGG | + | tig0035480:19922-19941 | None:intergenic | 40.0% |
| ATTACAGGATGGCAGTCTAA+GGG | - | tig0035480:20267-20286 | Msa1454870:intron | 40.0% | |
| CTTCACAGTAGAATGAGCAT+TGG | + | tig0035480:20332-20351 | None:intergenic | 40.0% | |
| CAATGCTCATTCTACTGTGA+AGG | - | tig0035480:20330-20349 | Msa1454870:intron | 40.0% | |
| ! | CTGTGAAGGACTTGCATTTT+AGG | - | tig0035480:20344-20363 | Msa1454870:intron | 40.0% |
| !! | TGGCAAGTTGATTGTCTCTT+TGG | - | tig0035480:20535-20554 | Msa1454870:intron | 40.0% |
| !! | GGCAAGTTGATTGTCTCTTT+GGG | - | tig0035480:20536-20555 | Msa1454870:intron | 40.0% |
| ! | AAGTTGATTGTCTCTTTGGG+AGG | - | tig0035480:20539-20558 | Msa1454870:intron | 40.0% |
| TCTTCTTACAACGGCATCTA+CGG | + | tig0035480:20919-20938 | None:intergenic | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | tig0035480:20957-20976 | Msa1454870:intron | 40.0% | |
| !! | TAGATGACATGTTGACTTGG+TGG | - | tig0035480:21352-21371 | Msa1454870:intron | 40.0% |
| CAAGTTTAGGGAAAACAAGC+TGG | + | tig0035480:21413-21432 | None:intergenic | 40.0% | |
| !!! | AGAAGGTGAATTGGTTTTCC+TGG | - | tig0035480:22144-22163 | Msa1454870:intron | 40.0% |
| !!! | ATTGGTTTTCCTGGAGTTGA+TGG | - | tig0035480:22153-22172 | Msa1454870:intron | 40.0% |
| !! | TTGGTTTTCCTGGAGTTGAT+GGG | - | tig0035480:22154-22173 | Msa1454870:intron | 40.0% |
| TTATTTCACCCATCAACTCC+AGG | + | tig0035480:22165-22184 | None:intergenic | 40.0% | |
| !! | GGAGTTGATGGGTGAAATAA+AGG | - | tig0035480:22165-22184 | Msa1454870:intron | 40.0% |
| TGGGTGAAATAAAGGGGATA+AGG | - | tig0035480:22173-22192 | Msa1454870:intron | 40.0% | |
| GTGAAATAAAGGGGATAAGG+AGG | - | tig0035480:22176-22195 | Msa1454870:intron | 40.0% | |
| ATAAAGGGGATAAGGAGGTT+AGG | - | tig0035480:22181-22200 | Msa1454870:intron | 40.0% | |
| CTGTTCTGGCAGCAATATAT+AGG | + | tig0035480:22724-22743 | None:intergenic | 40.0% | |
| CTATATATTGCTGCCAGAAC+AGG | - | tig0035480:22722-22741 | Msa1454870:intron | 40.0% | |
| TGACCTGGAATACACAAACA+TGG | - | tig0035480:22840-22859 | Msa1454870:intron | 40.0% | |
| GACCTGGAATACACAAACAT+GGG | - | tig0035480:22841-22860 | Msa1454870:intron | 40.0% | |
| TTCCCATGTTTGTGTATTCC+AGG | + | tig0035480:22846-22865 | None:intergenic | 40.0% | |
| GGAATACACAAACATGGGAA+AGG | - | tig0035480:22846-22865 | Msa1454870:intron | 40.0% | |
| ! | ATGAACGAGAGGGATTTTGA+AGG | - | tig0035480:23419-23438 | Msa1454870:intron | 40.0% |
| !! | GGATTTTGAAGGTGGTGTTA+TGG | - | tig0035480:23430-23449 | Msa1454870:intron | 40.0% |
| !!! | TTTTGAAGGTGGTGTTATGG+TGG | - | tig0035480:23433-23452 | Msa1454870:intron | 40.0% |
| !! | ACATGTAGCTGTTTCTATGG+AGG | + | tig0035480:23592-23611 | None:intergenic | 40.0% |
| TATTCTTCTGGTACTTGCAG+TGG | - | tig0035480:23620-23639 | Msa1454870:intron | 40.0% | |
| TTAAGCTACCTGAAAGCAAG+TGG | - | tig0035480:23659-23678 | Msa1454870:intron | 40.0% | |
| ! | TTACATTGCCACTTGCTTTC+AGG | + | tig0035480:23670-23689 | None:intergenic | 40.0% |
| ! | TAGCATTTTCCCCTGATTCA+AGG | - | tig0035480:23901-23920 | Msa1454870:intron | 40.0% |
| CACCAGACTGATAGGAAAAA+AGG | + | tig0035480:24181-24200 | None:intergenic | 40.0% | |
| ! | CCTTGATTGTTAGAGCATCT+CGG | - | tig0035480:24211-24230 | Msa1454870:intron | 40.0% |
| ! | ATTGTTAGAGCATCTCGGAT+GGG | - | tig0035480:24216-24235 | Msa1454870:intron | 40.0% |
| GAACATGTTCATTCTCCCTA+TGG | + | tig0035480:24258-24277 | None:intergenic | 40.0% | |
| ! | GCAATTAACTTTGCCACTTC+AGG | + | tig0035480:24306-24325 | None:intergenic | 40.0% |
| AGTGCATTGTAGAGACCATT+TGG | - | tig0035480:24419-24438 | Msa1454870:intron | 40.0% | |
| AGTAAGCAGCTATTGCAAGT+AGG | + | tig0035480:24851-24870 | None:intergenic | 40.0% | |
| AATAGCTGCTTACTTCCTGA+AGG | - | tig0035480:24857-24876 | Msa1454870:CDS | 40.0% | |
| CACTAAACTTCCCCCAAAAA+TGG | + | tig0035480:24989-25008 | None:intergenic | 40.0% | |
| ATTCTGAGTGGTTGTACCAT+TGG | - | tig0035480:25031-25050 | Msa1454870:CDS | 40.0% | |
| TTCTGAGTGGTTGTACCATT+GGG | - | tig0035480:25032-25051 | Msa1454870:CDS | 40.0% | |
| CGACTGTAATTTAGAGACGG+AGG | - | tig0035480:16760-16779 | Msa1454870:three_prime_UTR | 45.0% | |
| ! | CCGTATTTCTTCAGGTTCGA+AGG | + | tig0035480:16914-16933 | None:intergenic | 45.0% |
| AAGGAACGCCGTATTTCTTC+AGG | + | tig0035480:16922-16941 | None:intergenic | 45.0% | |
| ACCCAAGCAACGGAGTATAA+AGG | + | tig0035480:16941-16960 | None:intergenic | 45.0% | |
| GTCGGAGGAATGATCATCAT+CGG | + | tig0035480:17002-17021 | None:intergenic | 45.0% | |
| TTTATGATCGGCAGCATCGT+CGG | + | tig0035480:17020-17039 | None:intergenic | 45.0% | |
| TGCCGATCATAAATCTTCGC+CGG | - | tig0035480:17027-17046 | Msa1454870:three_prime_UTR | 45.0% | |
| CTCCGGCGAAGATTTATGAT+CGG | + | tig0035480:17032-17051 | None:intergenic | 45.0% | |
| TCATAAATCTTCGCCGGAGA+CGG | - | tig0035480:17033-17052 | Msa1454870:three_prime_UTR | 45.0% | |
| CACTCACACATATCGGACAT+CGG | + | tig0035480:17394-17413 | None:intergenic | 45.0% | |
| TTGAGGGCAATCACAAGTGT+CGG | + | tig0035480:17424-17443 | None:intergenic | 45.0% | |
| ! | GGGTGAAGTGCCATTCTATA+AGG | + | tig0035480:17644-17663 | None:intergenic | 45.0% |
| !! | TGGAAAAGCCAAAGTGTTGC+AGG | - | tig0035480:17690-17709 | Msa1454870:intron | 45.0% |
| TAAACACACACACACAGGAG+GGG | - | tig0035480:17846-17865 | Msa1454870:intron | 45.0% | |
| ATCCTCACAGCCAAACCATT+AGG | - | tig0035480:17875-17894 | Msa1454870:intron | 45.0% | |
| ! | ATCCTAATGGTTTGGCTGTG+AGG | + | tig0035480:17880-17899 | None:intergenic | 45.0% |
| ACCATTAGGATGTAACCACG+AGG | - | tig0035480:17889-17908 | Msa1454870:intron | 45.0% | |
| TCCTCGTGGTTACATCCTAA+TGG | + | tig0035480:17893-17912 | None:intergenic | 45.0% | |
| ACAGAATTGTAAGCCGTGCT+TGG | - | tig0035480:17935-17954 | Msa1454870:CDS | 45.0% | |
| CAGAATTGTAAGCCGTGCTT+GGG | - | tig0035480:17936-17955 | Msa1454870:CDS | 45.0% | |
| !! | ACTTTTAGAGGGTTGGCAAC+TGG | - | tig0035480:18708-18727 | Msa1454870:intron | 45.0% |
| ATTTAGCTAGTGGCAGCACT+AGG | + | tig0035480:18772-18791 | None:intergenic | 45.0% | |
| GTTAAGGTCATGTGTTGCGT+TGG | - | tig0035480:18844-18863 | Msa1454870:intron | 45.0% | |
| ! | GCGTGTATATAAATGGTGGG+TGG | + | tig0035480:19083-19102 | None:intergenic | 45.0% |
| TCAAACCATCTGCATGTGCA+AGG | + | tig0035480:19269-19288 | None:intergenic | 45.0% | |
| CACATGCAGATGGTTTGACT+GGG | - | tig0035480:19271-19290 | Msa1454870:CDS | 45.0% | |
| CTCACCCAGTTGGATAATGT+TGG | - | tig0035480:19350-19369 | Msa1454870:intron | 45.0% | |
| CAGTCAAACCGTTACGAATG+TGG | - | tig0035480:19622-19641 | Msa1454870:intron | 45.0% | |
| TAGGTCAGGGGACAAACAAA+TGG | + | tig0035480:19814-19833 | None:intergenic | 45.0% | |
| GTATATTCCCACTAGGTCAG+GGG | + | tig0035480:19826-19845 | None:intergenic | 45.0% | |
| GAAGATTCAGCCTAAATGGG+TGG | - | tig0035480:19962-19981 | Msa1454870:intron | 45.0% | |
| CATTACAGGATGGCAGTCTA+AGG | - | tig0035480:20266-20285 | Msa1454870:intron | 45.0% | |
| !! | GCAGTCTAAGGGTTTTCAAG+TGG | - | tig0035480:20278-20297 | Msa1454870:intron | 45.0% |
| !! | TGATGGATTGTGGCTTAGTC+TGG | - | tig0035480:20489-20508 | Msa1454870:intron | 45.0% |
| ! | TGTCTGTCTTGCAGTTCTGA+TGG | - | tig0035480:20515-20534 | Msa1454870:intron | 45.0% |
| ! | TTGATTGTCTCTTTGGGAGG+TGG | - | tig0035480:20542-20561 | Msa1454870:intron | 45.0% |
| TGACACCATTAGAGAGAGAG+TGG | - | tig0035480:20824-20843 | Msa1454870:intron | 45.0% | |
| GACACCATTAGAGAGAGAGT+GGG | - | tig0035480:20825-20844 | Msa1454870:intron | 45.0% | |
| ACACCATTAGAGAGAGAGTG+GGG | - | tig0035480:20826-20845 | Msa1454870:intron | 45.0% | |
| CTTCTTACAACGGCATCTAC+GGG | + | tig0035480:20918-20937 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | - | tig0035480:20941-20960 | Msa1454870:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | tig0035480:20951-20970 | Msa1454870:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | tig0035480:21097-21116 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | tig0035480:21098-21117 | None:intergenic | 45.0% |
| TAATTGGTCAGACCAGCATG+CGG | - | tig0035480:21471-21490 | Msa1454870:intron | 45.0% | |
| TCAAACAAAGGATGGGACTC+AGG | - | tig0035480:22697-22716 | Msa1454870:CDS | 45.0% | |
| !!! | GTTTTGGAAGCATTGTGACC+TGG | - | tig0035480:22825-22844 | Msa1454870:intron | 45.0% |
| GCATTCAATGTCTCAGCTGA+TGG | - | tig0035480:22905-22924 | Msa1454870:intron | 45.0% | |
| CTCAGCTGATGGAAAGTTTC+TGG | - | tig0035480:22916-22935 | Msa1454870:intron | 45.0% | |
| !! | CTGATGGAAAGTTTCTGGCA+TGG | - | tig0035480:22921-22940 | Msa1454870:intron | 45.0% |
| !! | TTTAGACTTTGGCTCGGTTG+AGG | - | tig0035480:22950-22969 | Msa1454870:intron | 45.0% |
| GTTAAGCAACAGTGTGCTTG+TGG | - | tig0035480:23157-23176 | Msa1454870:intron | 45.0% | |
| GTTAAGCAACAGTGTGCTTG+TGG | - | tig0035480:23157-23176 | Msa1454870:intron | 45.0% | |
| !! | AACGAGAGGGATTTTGAAGG+TGG | - | tig0035480:23422-23441 | Msa1454870:intron | 45.0% |
| TTTGGGAGGAATAACGTGTG+CGG | - | tig0035480:23487-23506 | Msa1454870:intron | 45.0% | |
| GTCAAACATGTGGTTCACTG+TGG | + | tig0035480:23565-23584 | None:intergenic | 45.0% | |
| TGGAGGACAAGTCAAACATG+TGG | + | tig0035480:23575-23594 | None:intergenic | 45.0% | |
| AATGCACTCTTGAGGTCTGA+AGG | + | tig0035480:23742-23761 | None:intergenic | 45.0% | |
| ! | TTTGGTGGCTTGATATGCAG+CGG | - | tig0035480:23786-23805 | Msa1454870:intron | 45.0% |
| CTAAAGCAGTTACTACGCCA+AGG | + | tig0035480:23884-23903 | None:intergenic | 45.0% | |
| GGCTTCTATATTCAGGGCAT+TGG | - | tig0035480:23994-24013 | Msa1454870:intron | 45.0% | |
| TATCCATGGATTCAAGTGCG+AGG | - | tig0035480:24023-24042 | Msa1454870:intron | 45.0% | |
| ATCCATGGATTCAAGTGCGA+GGG | - | tig0035480:24024-24043 | Msa1454870:intron | 45.0% | |
| CCGAGATGCTCTAACAATCA+AGG | + | tig0035480:24214-24233 | None:intergenic | 45.0% | |
| ! | GATTGTTAGAGCATCTCGGA+TGG | - | tig0035480:24215-24234 | Msa1454870:intron | 45.0% |
| ! | TTGTTAGAGCATCTCGGATG+GGG | - | tig0035480:24217-24236 | Msa1454870:intron | 45.0% |
| !! | CTCGGATGGGGGTATTTAAA+AGG | - | tig0035480:24229-24248 | Msa1454870:intron | 45.0% |
| GTGTATGAAACTCCTGAACG+TGG | - | tig0035480:24447-24466 | Msa1454870:intron | 45.0% | |
| ACAATGGGGTCATGTGCTAT+AGG | + | tig0035480:24764-24783 | None:intergenic | 45.0% | |
| GCTTACTTCCTGAAGGTTGA+AGG | - | tig0035480:24864-24883 | Msa1454870:CDS | 45.0% | |
| !! | TAAAATAATAAATTAATGAA+TGG | + | tig0035480:19538-19557 | None:intergenic | 5.0% |
| ! | TCTTCAGGTTCGAAGGGTCT+GGG | + | tig0035480:16907-16926 | None:intergenic | 50.0% |
| ! | TTCTTCAGGTTCGAAGGGTC+TGG | + | tig0035480:16908-16927 | None:intergenic | 50.0% |
| GGAGGAATGATCATCATCGG+CGG | + | tig0035480:16999-17018 | None:intergenic | 50.0% | |
| GGCAAACACGACGTACTTTC+CGG | + | tig0035480:17071-17090 | None:intergenic | 50.0% | |
| ! | GGAAAGTACGTCGTGTTTGC+CGG | - | tig0035480:17070-17089 | Msa1454870:exon | 50.0% |
| TGCCCGAGCAACACAGAATT+AGG | + | tig0035480:17124-17143 | None:intergenic | 50.0% | |
| CGGGCATTTCGATGTTGCAT+CGG | - | tig0035480:17138-17157 | Msa1454870:CDS | 50.0% | |
| GGATTCTCTCTCTGATCCAC+CGG | - | tig0035480:17159-17178 | Msa1454870:CDS | 50.0% | |
| !! | GGCAATCACAAGTGTCGGTA+TGG | + | tig0035480:17419-17438 | None:intergenic | 50.0% |
| AGAATGGCACTTCACCCCAA+CGG | - | tig0035480:17647-17666 | Msa1454870:intron | 50.0% | |
| AAACACACACACACAGGAGG+GGG | - | tig0035480:17847-17866 | Msa1454870:intron | 50.0% | |
| TAACTTGGTCAGCCCAAGCA+CGG | + | tig0035480:17951-17970 | None:intergenic | 50.0% | |
| ! | AGGGTTGGCAACTGGATGAT+TGG | - | tig0035480:18716-18735 | Msa1454870:intron | 50.0% |
| GCAGCACTAGGACATGTTCT+GGG | + | tig0035480:18760-18779 | None:intergenic | 50.0% | |
| GTACGGGTTTACTGCATTGC+AGG | - | tig0035480:18796-18815 | Msa1454870:intron | 50.0% | |
| GCATGAAGCCCAATAGTGCT+GGG | - | tig0035480:19101-19120 | Msa1454870:CDS | 50.0% | |
| CATGAAGCCCAATAGTGCTG+GGG | - | tig0035480:19102-19121 | Msa1454870:CDS | 50.0% | |
| ! | ATGAAGCCCAATAGTGCTGG+GGG | - | tig0035480:19103-19122 | Msa1454870:CDS | 50.0% |
| CTATGCCTTGCACATGCAGA+TGG | - | tig0035480:19261-19280 | Msa1454870:CDS | 50.0% | |
| GCACATGCAGATGGTTTGAC+TGG | - | tig0035480:19270-19289 | Msa1454870:CDS | 50.0% | |
| AGAGAAGCTTCTCACCCAGT+TGG | - | tig0035480:19340-19359 | Msa1454870:intron | 50.0% | |
| GATGGTACTACACTAGCTGC+TGG | - | tig0035480:19401-19420 | Msa1454870:intron | 50.0% | |
| TTGTTTGTCCCCTGACCTAG+TGG | - | tig0035480:19815-19834 | Msa1454870:intron | 50.0% | |
| TGTTTGTCCCCTGACCTAGT+GGG | - | tig0035480:19816-19835 | Msa1454870:intron | 50.0% | |
| ! | TTGTCGGTTGCCACCCATTT+AGG | + | tig0035480:19975-19994 | None:intergenic | 50.0% |
| !!! | GGTTTTCAAGTGGCCTAGCA+TGG | - | tig0035480:20288-20307 | Msa1454870:intron | 50.0% |
| ! | ATTGTCTCTTTGGGAGGTGG+CGG | - | tig0035480:20545-20564 | Msa1454870:intron | 50.0% |
| AAACATCCCAAACCCTGCAG+GGG | + | tig0035480:20571-20590 | None:intergenic | 50.0% | |
| GAAACATCCCAAACCCTGCA+GGG | + | tig0035480:20572-20591 | None:intergenic | 50.0% | |
| AGAAACATCCCAAACCCTGC+AGG | + | tig0035480:20573-20592 | None:intergenic | 50.0% | |
| CACCATTAGAGAGAGAGTGG+GGG | - | tig0035480:20827-20846 | Msa1454870:intron | 50.0% | |
| TACCCCCACTCTCTCTCTAA+TGG | + | tig0035480:20832-20851 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | tig0035480:21093-21112 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | tig0035480:21099-21118 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | tig0035480:21096-21115 | Msa1454870:intron | 50.0% | |
| AATTGGTCAGACCAGCATGC+GGG | - | tig0035480:21472-21491 | Msa1454870:intron | 50.0% | |
| ! | GGAAGGAGGGAGTATGTTGT+TGG | + | tig0035480:22223-22242 | None:intergenic | 50.0% |
| GGCTTGTAACAAGGGAAGGA+GGG | + | tig0035480:22236-22255 | None:intergenic | 50.0% | |
| TCAGGGCTTGTAACAAGGGA+AGG | + | tig0035480:22240-22259 | None:intergenic | 50.0% | |
| GCAGTCAGGGCTTGTAACAA+GGG | + | tig0035480:22244-22263 | None:intergenic | 50.0% | |
| TGCAGTCAGGGCTTGTAACA+AGG | + | tig0035480:22245-22264 | None:intergenic | 50.0% | |
| TTACTGCCTTGGGCGAACAT+GGG | - | tig0035480:22541-22560 | Msa1454870:intron | 50.0% | |
| CATATTCCCATGTTCGCCCA+AGG | + | tig0035480:22550-22569 | None:intergenic | 50.0% | |
| CTTGGGCGAACATGGGAATA+TGG | - | tig0035480:22548-22567 | Msa1454870:intron | 50.0% | |
| TGTGCTTGTGGATGAACGAG+AGG | - | tig0035480:23169-23188 | Msa1454870:intron | 50.0% | |
| GTGCTTGTGGATGAACGAGA+GGG | - | tig0035480:23170-23189 | Msa1454870:intron | 50.0% | |
| TGGATGAACGAGAGGGACTT+TGG | - | tig0035480:23177-23196 | Msa1454870:intron | 50.0% | |
| TGTGCTTGTGGATGAACGAG+AGG | - | tig0035480:23169-23188 | Msa1454870:intron | 50.0% | |
| GTGCTTGTGGATGAACGAGA+GGG | - | tig0035480:23170-23189 | Msa1454870:intron | 50.0% | |
| !! | GTGTTATGGTGGACAGTGAG+TGG | - | tig0035480:23444-23463 | Msa1454870:intron | 50.0% |
| ATATGCAGCGGAACACCTGA+AGG | - | tig0035480:23798-23817 | Msa1454870:intron | 50.0% | |
| !! | GGCATTGGCTTCTGTATCCA+TGG | - | tig0035480:24009-24028 | Msa1454870:intron | 50.0% |
| TACCCTCGCACTTGAATCCA+TGG | + | tig0035480:24029-24048 | None:intergenic | 50.0% | |
| ! | TGTTAGAGCATCTCGGATGG+GGG | - | tig0035480:24218-24237 | Msa1454870:intron | 50.0% |
| TCCATTGGAGGAACCTGAAG+TGG | - | tig0035480:24290-24309 | Msa1454870:CDS | 50.0% | |
| CGATTGTGTATCAAGTGGCG+TGG | - | tig0035480:24738-24757 | Msa1454870:intron | 50.0% | |
| TTTAAGGAGGAGGACTGAGC+TGG | - | tig0035480:24805-24824 | Msa1454870:intron | 50.0% | |
| GGATTGTGGGACCCAAGCAA+CGG | + | tig0035480:16951-16970 | None:intergenic | 55.0% | |
| GCGTCAATTGCTTCCGTCTC+CGG | + | tig0035480:17049-17068 | None:intergenic | 55.0% | |
| GAGACGGAAGCAATTGACGC+CGG | - | tig0035480:17049-17068 | Msa1454870:three_prime_UTR | 55.0% | |
| AAGTACGTCGTGTTTGCCGG+TGG | - | tig0035480:17073-17092 | Msa1454870:CDS | 55.0% | |
| TCGAGTATGGGTAGGCCACT+AGG | + | tig0035480:17825-17844 | None:intergenic | 55.0% | |
| AACACACACACACAGGAGGG+GGG | - | tig0035480:17848-17867 | Msa1454870:intron | 55.0% | |
| ! | GTCTGGCTTCAATGTCCTCG+TGG | + | tig0035480:17907-17926 | None:intergenic | 55.0% |
| GGCAGCACTAGGACATGTTC+TGG | + | tig0035480:18761-18780 | None:intergenic | 55.0% | |
| CGGGTTTACTGCATTGCAGG+AGG | - | tig0035480:18799-18818 | Msa1454870:intron | 55.0% | |
| CGCATGAAGCCCAATAGTGC+TGG | - | tig0035480:19100-19119 | Msa1454870:CDS | 55.0% | |
| GGTACTACACTAGCTGCTGG+TGG | - | tig0035480:19404-19423 | Msa1454870:intron | 55.0% | |
| TACACTAGCTGCTGGTGGAG+AGG | - | tig0035480:19409-19428 | Msa1454870:intron | 55.0% | |
| ! | AGCTGCTGGTGGAGAGGTAT+TGG | - | tig0035480:19415-19434 | Msa1454870:intron | 55.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | tig0035480:21085-21104 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | tig0035480:21084-21103 | Msa1454870:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | tig0035480:21085-21104 | Msa1454870:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | tig0035480:21091-21110 | Msa1454870:intron | 55.0% | |
| TTGAACCGTCAGACCAGCAC+TGG | - | tig0035480:21384-21403 | Msa1454870:CDS | 55.0% | |
| AACAAGCTGGTTGCCAGTGC+TGG | + | tig0035480:21400-21419 | None:intergenic | 55.0% | |
| GGGCTTGTAACAAGGGAAGG+AGG | + | tig0035480:22237-22256 | None:intergenic | 55.0% | |
| CTTACTGCCTTGGGCGAACA+TGG | - | tig0035480:22540-22559 | Msa1454870:intron | 55.0% | |
| GAACGAGAGGGACTTTGGCT+AGG | - | tig0035480:23182-23201 | Msa1454870:intron | 55.0% | |
| GAGGGACTTTGGCTAGGTTG+AGG | - | tig0035480:23188-23207 | Msa1454870:intron | 55.0% | |
| ! | GCCACTTCAGGTTCCTCCAA+TGG | + | tig0035480:24294-24313 | None:intergenic | 55.0% |
| ATGATCGGCAGCATCGTCGG+AGG | + | tig0035480:17017-17036 | None:intergenic | 60.0% | |
| TACGTCGTGTTTGCCGGTGG+CGG | - | tig0035480:17076-17095 | Msa1454870:CDS | 60.0% | |
| CGGACATCGGACACGCTAGA+AGG | + | tig0035480:17381-17400 | None:intergenic | 60.0% | |
| GCACTTCACCCCAACGGAGA+AGG | - | tig0035480:17653-17672 | Msa1454870:intron | 60.0% | |
| CCCTCACCCCCAGCACTATT+GGG | + | tig0035480:19112-19131 | None:intergenic | 60.0% | |
| ! | CCCAATAGTGCTGGGGGTGA+GGG | - | tig0035480:19109-19128 | Msa1454870:CDS | 60.0% |
| ! | CCAATAGTGCTGGGGGTGAG+GGG | - | tig0035480:19110-19129 | Msa1454870:CDS | 60.0% |
| ! | CAATAGTGCTGGGGGTGAGG+GGG | - | tig0035480:19111-19130 | Msa1454870:CDS | 60.0% |
| !! | GGTTGCCAGTGCTGGTCTGA+CGG | + | tig0035480:21392-21411 | None:intergenic | 60.0% |
| AAGGAGGAGGACTGAGCTGG+TGG | - | tig0035480:24808-24827 | Msa1454870:intron | 60.0% | |
| ! | GCCCAATAGTGCTGGGGGTG+AGG | - | tig0035480:19108-19127 | Msa1454870:CDS | 65.0% |
| CCCCTCACCCCCAGCACTAT+TGG | + | tig0035480:19113-19132 | None:intergenic | 65.0% | |
| CTGGGAATCTGCCCGCATGC+TGG | + | tig0035480:21486-21505 | None:intergenic | 65.0% | |
| ! | GTCGTGTTTGCCGGTGGCGG+TGG | - | tig0035480:17079-17098 | Msa1454870:CDS | 70.0% |
| GCGGCTATCTCCACCGCCAC+CGG | + | tig0035480:17092-17111 | None:intergenic | 70.0% | |
| GGCGGTGGAGATAGCCGCAG+TGG | - | tig0035480:17094-17113 | Msa1454870:CDS | 70.0% | |
| TGGCGGCCCCTGCAGGGTTT+GGG | - | tig0035480:20562-20581 | Msa1454870:intron | 70.0% | |
| GTGGCGGCCCCTGCAGGGTT+TGG | - | tig0035480:20561-20580 | Msa1454870:intron | 75.0% | |
| !! | TGGGAGGTGGCGGCCCCTGC+AGG | - | tig0035480:20555-20574 | Msa1454870:intron | 80.0% |
| !! | GGGAGGTGGCGGCCCCTGCA+GGG | - | tig0035480:20556-20575 | Msa1454870:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0035480 | gene | 16759 | 25240 | 16759 | ID=Msa1454870;Name=Msa1454870 |
| tig0035480 | mRNA | 16759 | 25240 | 16759 | ID=Msa1454870-mRNA-1;Parent=Msa1454870;Name=Msa1454870-mRNA-1;_AED=0.05;_eAED=0.05;_QI=128|1|1|1|1|1|10|314|411 |
| tig0035480 | exon | 16759 | 17188 | 16759 | ID=Msa1454870-mRNA-1:exon:19996;Parent=Msa1454870-mRNA-1 |
| tig0035480 | exon | 17926 | 17990 | 17926 | ID=Msa1454870-mRNA-1:exon:19995;Parent=Msa1454870-mRNA-1 |
| tig0035480 | exon | 18077 | 18193 | 18077 | ID=Msa1454870-mRNA-1:exon:19994;Parent=Msa1454870-mRNA-1 |
| tig0035480 | exon | 19057 | 19180 | 19057 | ID=Msa1454870-mRNA-1:exon:19993;Parent=Msa1454870-mRNA-1 |
| tig0035480 | exon | 19256 | 19331 | 19256 | ID=Msa1454870-mRNA-1:exon:19992;Parent=Msa1454870-mRNA-1 |
| tig0035480 | exon | 21371 | 21470 | 21371 | ID=Msa1454870-mRNA-1:exon:19991;Parent=Msa1454870-mRNA-1 |
| tig0035480 | exon | 21634 | 21725 | 21634 | ID=Msa1454870-mRNA-1:exon:19990;Parent=Msa1454870-mRNA-1 |
| tig0035480 | exon | 22569 | 22719 | 22569 | ID=Msa1454870-mRNA-1:exon:19989;Parent=Msa1454870-mRNA-1 |
| tig0035480 | exon | 24288 | 24388 | 24288 | ID=Msa1454870-mRNA-1:exon:19988;Parent=Msa1454870-mRNA-1 |
| tig0035480 | exon | 24819 | 25240 | 24819 | ID=Msa1454870-mRNA-1:exon:19987;Parent=Msa1454870-mRNA-1 |
| tig0035480 | five_prime_UTR | 25113 | 25240 | 25113 | ID=Msa1454870-mRNA-1:five_prime_utr;Parent=Msa1454870-mRNA-1 |
| tig0035480 | CDS | 24819 | 25112 | 24819 | ID=Msa1454870-mRNA-1:cds;Parent=Msa1454870-mRNA-1 |
| tig0035480 | CDS | 24288 | 24388 | 24288 | ID=Msa1454870-mRNA-1:cds;Parent=Msa1454870-mRNA-1 |
| tig0035480 | CDS | 22569 | 22719 | 22569 | ID=Msa1454870-mRNA-1:cds;Parent=Msa1454870-mRNA-1 |
| tig0035480 | CDS | 21634 | 21725 | 21634 | ID=Msa1454870-mRNA-1:cds;Parent=Msa1454870-mRNA-1 |
| tig0035480 | CDS | 21371 | 21470 | 21371 | ID=Msa1454870-mRNA-1:cds;Parent=Msa1454870-mRNA-1 |
| tig0035480 | CDS | 19256 | 19331 | 19256 | ID=Msa1454870-mRNA-1:cds;Parent=Msa1454870-mRNA-1 |
| tig0035480 | CDS | 19057 | 19180 | 19057 | ID=Msa1454870-mRNA-1:cds;Parent=Msa1454870-mRNA-1 |
| tig0035480 | CDS | 18077 | 18193 | 18077 | ID=Msa1454870-mRNA-1:cds;Parent=Msa1454870-mRNA-1 |
| tig0035480 | CDS | 17926 | 17990 | 17926 | ID=Msa1454870-mRNA-1:cds;Parent=Msa1454870-mRNA-1 |
| tig0035480 | CDS | 17073 | 17188 | 17073 | ID=Msa1454870-mRNA-1:cds;Parent=Msa1454870-mRNA-1 |
| tig0035480 | three_prime_UTR | 16759 | 17072 | 16759 | ID=Msa1454870-mRNA-1:three_prime_utr;Parent=Msa1454870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
