AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0244970


Find 325 sgRNAs with CRISPR-Local

Find 888 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr2_2 gene 23814916 23828228 23814916 ID=Msa0244970;Name=Msa0244970
chr2_2 mRNA 23814916 23828228 23814916 ID=Msa0244970-mRNA-1;Parent=Msa0244970;Name=Msa0244970-mRNA-1;_AED=0.16;_eAED=0.16;_QI=746|0.96|0.94|1|0.93|0.91|34|0|1077
chr2_2 exon 23814916 23815011 23814916 ID=Msa0244970-mRNA-1:exon:9206;Parent=Msa0244970-mRNA-1
chr2_2 exon 23815095 23815202 23815095 ID=Msa0244970-mRNA-1:exon:9205;Parent=Msa0244970-mRNA-1
chr2_2 exon 23815413 23815547 23815413 ID=Msa0244970-mRNA-1:exon:9204;Parent=Msa0244970-mRNA-1
chr2_2 exon 23815748 23815793 23815748 ID=Msa0244970-mRNA-1:exon:9203;Parent=Msa0244970-mRNA-1
chr2_2 exon 23816437 23816537 23816437 ID=Msa0244970-mRNA-1:exon:9202;Parent=Msa0244970-mRNA-1
chr2_2 exon 23816631 23816768 23816631 ID=Msa0244970-mRNA-1:exon:9201;Parent=Msa0244970-mRNA-1
chr2_2 exon 23817030 23817128 23817030 ID=Msa0244970-mRNA-1:exon:9200;Parent=Msa0244970-mRNA-1
chr2_2 exon 23817767 23817883 23817767 ID=Msa0244970-mRNA-1:exon:9199;Parent=Msa0244970-mRNA-1
chr2_2 exon 23817955 23818119 23817955 ID=Msa0244970-mRNA-1:exon:9198;Parent=Msa0244970-mRNA-1
chr2_2 exon 23818526 23818585 23818526 ID=Msa0244970-mRNA-1:exon:9197;Parent=Msa0244970-mRNA-1
chr2_2 exon 23819019 23819189 23819019 ID=Msa0244970-mRNA-1:exon:9196;Parent=Msa0244970-mRNA-1
chr2_2 exon 23819666 23819776 23819666 ID=Msa0244970-mRNA-1:exon:9195;Parent=Msa0244970-mRNA-1
chr2_2 exon 23819915 23820013 23819915 ID=Msa0244970-mRNA-1:exon:9194;Parent=Msa0244970-mRNA-1
chr2_2 exon 23820100 23820165 23820100 ID=Msa0244970-mRNA-1:exon:9193;Parent=Msa0244970-mRNA-1
chr2_2 exon 23820272 23820406 23820272 ID=Msa0244970-mRNA-1:exon:9192;Parent=Msa0244970-mRNA-1
chr2_2 exon 23820683 23820766 23820683 ID=Msa0244970-mRNA-1:exon:9191;Parent=Msa0244970-mRNA-1
chr2_2 exon 23820842 23820884 23820842 ID=Msa0244970-mRNA-1:exon:9190;Parent=Msa0244970-mRNA-1
chr2_2 exon 23821295 23821350 23821295 ID=Msa0244970-mRNA-1:exon:9189;Parent=Msa0244970-mRNA-1
chr2_2 exon 23821489 23821597 23821489 ID=Msa0244970-mRNA-1:exon:9188;Parent=Msa0244970-mRNA-1
chr2_2 exon 23821683 23821765 23821683 ID=Msa0244970-mRNA-1:exon:9187;Parent=Msa0244970-mRNA-1
chr2_2 exon 23821844 23821927 23821844 ID=Msa0244970-mRNA-1:exon:9186;Parent=Msa0244970-mRNA-1
chr2_2 exon 23822405 23822476 23822405 ID=Msa0244970-mRNA-1:exon:9185;Parent=Msa0244970-mRNA-1
chr2_2 exon 23822547 23822624 23822547 ID=Msa0244970-mRNA-1:exon:9184;Parent=Msa0244970-mRNA-1
chr2_2 exon 23822711 23822794 23822711 ID=Msa0244970-mRNA-1:exon:9183;Parent=Msa0244970-mRNA-1
chr2_2 exon 23822921 23822991 23822921 ID=Msa0244970-mRNA-1:exon:9182;Parent=Msa0244970-mRNA-1
chr2_2 exon 23823594 23823663 23823594 ID=Msa0244970-mRNA-1:exon:9181;Parent=Msa0244970-mRNA-1
chr2_2 exon 23823823 23823912 23823823 ID=Msa0244970-mRNA-1:exon:9180;Parent=Msa0244970-mRNA-1
chr2_2 exon 23824107 23824298 23824107 ID=Msa0244970-mRNA-1:exon:9179;Parent=Msa0244970-mRNA-1
chr2_2 exon 23824389 23824498 23824389 ID=Msa0244970-mRNA-1:exon:9178;Parent=Msa0244970-mRNA-1
chr2_2 exon 23824862 23824931 23824862 ID=Msa0244970-mRNA-1:exon:9177;Parent=Msa0244970-mRNA-1
chr2_2 exon 23825005 23825121 23825005 ID=Msa0244970-mRNA-1:exon:9176;Parent=Msa0244970-mRNA-1
chr2_2 exon 23826415 23826596 23826415 ID=Msa0244970-mRNA-1:exon:9175;Parent=Msa0244970-mRNA-1
chr2_2 exon 23827093 23827157 23827093 ID=Msa0244970-mRNA-1:exon:9174;Parent=Msa0244970-mRNA-1
chr2_2 exon 23827559 23828228 23827559 ID=Msa0244970-mRNA-1:exon:9173;Parent=Msa0244970-mRNA-1
chr2_2 five_prime_UTR 23827559 23828228 23827559 ID=Msa0244970-mRNA-1:five_prime_utr;Parent=Msa0244970-mRNA-1
chr2_2 five_prime_UTR 23827093 23827157 23827093 ID=Msa0244970-mRNA-1:five_prime_utr;Parent=Msa0244970-mRNA-1
chr2_2 five_prime_UTR 23826586 23826596 23826586 ID=Msa0244970-mRNA-1:five_prime_utr;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23826415 23826585 23826415 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23825005 23825121 23825005 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23824862 23824931 23824862 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23824389 23824498 23824389 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23824107 23824298 23824107 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23823823 23823912 23823823 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23823594 23823663 23823594 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23822921 23822991 23822921 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23822711 23822794 23822711 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23822547 23822624 23822547 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23822405 23822476 23822405 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23821844 23821927 23821844 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23821683 23821765 23821683 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23821489 23821597 23821489 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23821295 23821350 23821295 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23820842 23820884 23820842 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23820683 23820766 23820683 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23820272 23820406 23820272 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23820100 23820165 23820100 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23819915 23820013 23819915 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23819666 23819776 23819666 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23819019 23819189 23819019 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23818526 23818585 23818526 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23817955 23818119 23817955 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23817767 23817883 23817767 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23817030 23817128 23817030 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23816631 23816768 23816631 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23816437 23816537 23816437 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23815748 23815793 23815748 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23815413 23815547 23815413 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23815095 23815202 23815095 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
chr2_2 CDS 23814916 23815011 23814916 ID=Msa0244970-mRNA-1:cds;Parent=Msa0244970-mRNA-1
Gene Sequence

>Msa0244970

ATGAGTTTCATGAACGGTTCATCACCTCACCGGAATCCTCCACCGCCGCCGGAGAATGATATTGAAGCTGGTCCGTTGTCTCGCCGGAATTCTGAAGTCGACGACGACGGTGATGTCTTTGATATTGTTAGAACTAAGCATGCTTCCATTGATCGACTTCGCCGCTGGAGACAAGCGGCGCTTGTGCTAAATGCTTCCCGTCGATTTCGTTATACCTTGGACTTGAAGAAGGAAGAAGAGAAAAAACAAATACTGAGAAAGATTAGAGCGCATGCTCAAGCCATCAGAGCAGCATATCTTTTCAAGGCAGCTGGGGGACAAGGGCACGGACAAGTGCAAGGGCAAGTGAGCGGGACTGACACTATAAAACCTCCTCCAACCTCTACTGGTGAATTTCCAATTGGACCAGAGCAACTTGCTTCGATTTCAAGGGAGCATGATACTGCTTCTCTGCAGCAATATGGAGGGGTTGCAGGGGTATCAAATTTATTGAAAACTGATTTAGAGAAGGGAATTAATGGTGATGATGCCGACTTACTAAGACGGAGGAATGCGTTTGGTTCCAACAATTACCCTCGAAAGAAAGGAAGAAGTTTTTTTGTAAGTTCTACTGTTCTTGGACTCTTGAAATCATTTGATGTTTACCAACTTATTCGGCAGATGTTTATGTGGGATGCTTGCAAGGATCTGACCTTGGTTATTTTAATGGTAGCGGCAGCAGCTTCATTGGCACTGGGGATCAAATCTGAGGGTATTAAGGAAGGGTGGTATGATGGGGGTAGCATTGCTTTTGCGGTTATTCTTGTTATCGTCGTTACAGCTGTAAGCGACTACAAGCAGTCTCTTCAGTTTCGAGACCTAAATGAAGAAAAGAGAAATATACACTTGGAGGTTATTAGAGGTGGTAGAAGGGTTGAGATCTCCATATATGATCTTGTTGTTGGGGATGTTATACCTCTTAATATTGGTAACCAGGTCCCTGCTGATGGAGTTGTGATCACTGGTCACTCTCTTTCGATTGATGAGTCCAGCATGACAGGGGAGAGCAAAATTGTCCATAAGGATTCTAAGGATCCCTTTATGATGTCTGGCTGTAAGGTGGCAGATGGCAGTGGGACTATGCTGGTCACGGGCGTGGGGATTAATACTGAATGGGGGCTTCTAATGGCTAGCATTTCAGAAGATACTGGTGAAGAAACACCTTTGCAGGTCCGCTTGAATGGCGTAGCCACCTTTATTGGTACCGTTGGACTCAGTGTTGCTGTCCTTGTCCTGGCTGTGCTACTGGCCAGATATTTCTCTGGGCATACAAGGAATTCTGACGGGACAAAACAATTTATAGCAGGCAAGACTAAAGCTGGGCATGCTATTGATGGAGCAATTAAGATAATAACTGTCGCGGTCACCATTGTAGTTGTTGCAGTGCCCGAGGGGCTCCCACTTGCAGTCACTCTAACACTGGCCTACTCAATGCGAAAGATGATGGCGGATAAAGCTTTGGTGAGGAGGCTTTCTGCCTGTGAGACAATGGGCTCTGCTTCAACCATATGTAGTGACAAGACTGGCACATTAACGATGAACCAGATGACTGTGGTTGAGGTTTATGCCGGGGGCAGCAAGGTTGATCCTCCTCACCAGTTGGAGAGATCTCCTAAGCTACGCACTCTACTCATTGAAGGTGTTGCACAGAACACTAATGGCAGCGTTTATGTGCCTGAGGGTGCCAATGACATCGAGGTTTCAGGATCACCAACAGAAAAGGCTATATTAAATTGGGGCCTACAGGTTGGGATGAATTTTGTGACTGCTCGGTCAGAATCGTCAATTCTTCATGTCTTCCCATTCAACTCTGAGAAAAAGAGAGGCGGAGTTGCAATACAGACGGCTGACTCTGATGTTCATATACATTGGAAGGGTGCTGCTGAAATTGTTCTAGCCTGCTGTACAGGTTATATTGATGCAAATGATCAGTTGGTGGAGATTGATGAGGAGAAGATGACTTTTTTCAAGAAAGCGATTGAAGACATGGCTAATGATAGTCTACGTTGTGTTGCCATTGCGTATAGACCATATGAGAAGGAGAAAGTCCCAGATAATGAGGAACAACTTGCTCACTGGTCTTTGCCAGAAGAGGAACTTGTTTTACTAGCTATTGTTGGTATCAAGGATCCTTGTCGACCTGGTGTCAAAGATTCAGTACAGCTTTGCCAAAAAGCCGGGGTTAAGGTTAAGATGGTAACAGGCGACAATGTCAAAACTGCAAAAGCCATTGCTCTGGAATGTGGAATACTGAGTTCACTTGCTGATGTTACCGAGAGAAGTGTCATTGAAGGAAAAACCTTCCGAGCGTTGTCAGATTCCGAGAGAGAAGAAATTGCGGAATCGATATCGGTTATGGGAAGGTCATCTCCCAATGATAAACTGTTATTGGTACAAGCCTTAAGGAGGAAGGGCCATGTTGTAGCTGTAACGGGGGATGGCACAAATGATGCCCCTGCACTTCATGAGGCGGATATTGGTCTTGCGATGGGTATTGCTGGTACAGAAGTGGCTAAAGAAAGTTCCGATATCATTATCTTGGATGACAACTTTGCTTCAGTTGTGAAGGTTGTCAGGTGGGGTCGGTCTGTTTATGCGAATATTCAGAAATTTATCCAGTTTCAGTTGACAGTCAATGTGGCTGCTCTTGTTATAAATGTTGTTGCTGCAATTTCCTCTGGTGATGTTCCACTGAACGCAGTGCAGCTTCTTTGGGTGAATCTTATCATGGATACTCTAGGAGCACTAGCTTTGGCAACTGAACCGCCAACTGACCACCTGATGGACCGGACTCCCGTGGGTCGAAGGGAACCTCTCATAACAAATATTATGTGGAGGAATTTGCTGATTCAGGCAATGTATCAAGTTTCTGTCTTGCTGGTTCTCAATTTCAGAGGTATAAGCATATTGGGTCTGGAGCATCAACCTACTGAACATGCAATCAAAGTAAAAAACACTTTGATCTTCAATGCATTTGTTATCTGTCAAATCTTCAATGAATTTAATGCGCGCAAGCCAGATGAATTCAACATTTTCAAAGGAGTTACTAGAAACTACCTCTTCATGGGGATAGTGGGATTCACTGTCGTACTTCAGGTTATCATAGTTGAATTTCTTGGGAAGTTCACTACAACCACTAGGCTTAATTGGAAGCAGTGGCTTATTTCTGTCGCCATTGGATTCATTGGGTCA

Protein sequence

>Msa0244970

MSFMNGSSPHRNPPPPPENDIEAGPLSRRNSEVDDDGDVFDIVRTKHASIDRLRRWRQAALVLNASRRFRYTLDLKKEEEKKQILRKIRAHAQAIRAAYLFKAAGGQGHGQVQGQVSGTDTIKPPPTSTGEFPIGPEQLASISREHDTASLQQYGGVAGVSNLLKTDLEKGINGDDADLLRRRNAFGSNNYPRKKGRSFFVSSTVLGLLKSFDVYQLIRQMFMWDACKDLTLVILMVAAAASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAVSDYKQSLQFRDLNEEKRNIHLEVIRGGRRVEISIYDLVVGDVIPLNIGNQVPADGVVITGHSLSIDESSMTGESKIVHKDSKDPFMMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGTVGLSVAVLVLAVLLARYFSGHTRNSDGTKQFIAGKTKAGHAIDGAIKIITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSASTICSDKTGTLTMNQMTVVEVYAGGSKVDPPHQLERSPKLRTLLIEGVAQNTNGSVYVPEGANDIEVSGSPTEKAILNWGLQVGMNFVTARSESSILHVFPFNSEKKRGGVAIQTADSDVHIHWKGAAEIVLACCTGYIDANDQLVEIDEEKMTFFKKAIEDMANDSLRCVAIAYRPYEKEKVPDNEEQLAHWSLPEEELVLLAIVGIKDPCRPGVKDSVQLCQKAGVKVKMVTGDNVKTAKAIALECGILSSLADVTERSVIEGKTFRALSDSEREEIAESISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRTPVGRREPLITNIMWRNLLIQAMYQVSVLLVLNFRGISILGLEHQPTEHAIKVKNTLIFNAFVICQIFNEFNARKPDEFNIFKGVTRNYLFMGIVGFTVVLQVIIVEFLGKFTTTTRLNWKQWLISVAIGFIGS