AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0037770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0037770 MtrunA17_Chr1g0212491 97.277 1322 36 0 1 1322 1 1322 0.0 2664
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0037770 AT5G13680.1 58.383 1336 522 14 1 1320 1 1318 0.0 1545

Find 303 sgRNAs with CRISPR-Local

Find 478 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTTGTCTGTTTCCCATTA+TGG 0.185338 1_1:-66944338 Msa0037770:CDS
TTCAGATGGAGAAAACTTTA+TGG 0.189369 1_1:-66945212 Msa0037770:intron
TGTTGTCTACGGGGAAATTT+TGG 0.193953 1_1:+66943310 None:intergenic
TGTCAGGCAGGTCAACAATT+TGG 0.206695 1_1:-66943451 Msa0037770:CDS
CTTCATCCTTTCCCAGATTA+AGG 0.210527 1_1:+66942596 None:intergenic
ACACTTGAAGAGCTTGTTAT+TGG 0.210533 1_1:-66944161 Msa0037770:CDS
GACATTGTCGATATATTTAA+TGG 0.211267 1_1:-66943798 Msa0037770:CDS
ATGAAAATTACATACATATA+TGG 0.211922 1_1:-66943716 Msa0037770:CDS
AGTATGTGCATACTCGTTTA+TGG 0.241310 1_1:+66940838 None:intergenic
AGTGGGGTGCTTACAGTTGC+TGG 0.248131 1_1:-66942622 Msa0037770:CDS
TATCACGGAAACTTAAGATT+TGG 0.250979 1_1:-66945120 Msa0037770:CDS
TCCGCAGTAACAGCAGAAAA+AGG 0.261607 1_1:-66943746 Msa0037770:CDS
AGTATCTAATTTCATGCTTC+AGG 0.268389 1_1:+66944789 None:intergenic
TGCAGTTCTGATCTTCTTGC+TGG 0.268402 1_1:-66944875 Msa0037770:CDS
ATTGCTGTAGTTACTGGTTT+TGG 0.269867 1_1:-66946404 Msa0037770:CDS
AGTTGCTGGGTTCCTTAATC+TGG 0.272201 1_1:-66942608 Msa0037770:CDS
AAGATTTGGGAACGAGATTC+AGG 0.276496 1_1:-66945106 Msa0037770:CDS
TGCTGTCTATGATGCTGCTT+TGG 0.282386 1_1:-66943043 Msa0037770:CDS
GAATATTTACTGGCAGGATT+TGG 0.291606 1_1:+66944131 None:intergenic
ACAGTAATCCAGGGCAATTT+TGG 0.294155 1_1:+66942510 None:intergenic
TCGATGTTGTATTGCATTAA+TGG 0.299042 1_1:+66942919 None:intergenic
CCAGGATTGCTGACATGTTC+AGG 0.304653 1_1:-66944212 Msa0037770:CDS
GGGGAGTTAGACTCAAAGTA+TGG 0.306448 1_1:-66943777 Msa0037770:CDS
TTCTAGGGTATATACATTCT+AGG 0.306612 1_1:+66943619 None:intergenic
TGTCACTGGTGGCGGATCTT+TGG 0.307921 1_1:-66944057 Msa0037770:CDS
GAAGTTATTGCTGTAGTTAC+TGG 0.311951 1_1:-66946410 Msa0037770:CDS
CACCCTCATTTAGTGAGCTT+TGG 0.315175 1_1:+66944291 None:intergenic
TCTTCCCAAGTTTCAATTGA+TGG 0.316773 1_1:+66944452 None:intergenic
CCATCTCCTCGCCATGATAT+AGG 0.322337 1_1:+66945181 None:intergenic
TTTCGTCGTCGGAGTTTAAT+CGG 0.324642 1_1:+66946759 None:intergenic
ATGTATATACCCTAGAAAAT+TGG 0.332142 1_1:-66943613 Msa0037770:CDS
AACCTTTGCAGTTGATTTGT+TGG 0.333143 1_1:-66944727 Msa0037770:CDS
CATATATGCAGAATATTTAC+TGG 0.334000 1_1:+66944121 None:intergenic
GTCAGGCAGGTCAACAATTT+GGG 0.339768 1_1:-66943450 Msa0037770:CDS
ACTTCGAGGCTTCTATTTGC+AGG 0.343023 1_1:-66944267 Msa0037770:CDS
TACCTTCACGTTTCTCTGAT+TGG 0.345123 1_1:+66942254 None:intergenic
CAGTTGATTTGTTGGACTCT+TGG 0.348830 1_1:-66944719 Msa0037770:CDS
ATCACGGAAACTTAAGATTT+GGG 0.352844 1_1:-66945119 Msa0037770:CDS
ATACCCTAGAAAATTGGTTT+TGG 0.358063 1_1:-66943607 Msa0037770:CDS
AAATGCAGCTAACTGGTTCT+TGG 0.362564 1_1:+66944508 None:intergenic
TTGGTTTCCCTTATGATGTT+TGG 0.365750 1_1:-66940962 Msa0037770:CDS
AACATTAGCAACCTCTGAAC+AGG 0.367349 1_1:+66943350 None:intergenic
GATCCACATTACATCTTGTA+TGG 0.371749 1_1:-66944376 Msa0037770:CDS
TGCAAGGAAGCTACAGCAAA+TGG 0.374372 1_1:-66940927 Msa0037770:CDS
CTTATCGTGCTATTAATAAC+TGG 0.374570 1_1:-66942645 Msa0037770:CDS
ACGAGAGCTGAAATCTTTGT+TGG 0.374668 1_1:-66940981 Msa0037770:CDS
CTATTTGCAGGAAATAGAAT+TGG 0.375015 1_1:-66944255 Msa0037770:CDS
AAGAAAGGAAGAAATTCTTT+TGG 0.377148 1_1:+66942967 None:intergenic
CCTGAACATGTCAGCAATCC+TGG 0.377770 1_1:+66944212 None:intergenic
TTACTTGTCCTGTTTCAATC+TGG 0.379189 1_1:-66942683 Msa0037770:CDS
TAGCAGGGCTTTCTGTAAAA+TGG 0.382079 1_1:+66943244 None:intergenic
ACATTGTCGATATATTTAAT+GGG 0.383887 1_1:-66943797 Msa0037770:CDS
TGCTGTGACTGAAACCATAA+TGG 0.384145 1_1:+66944324 None:intergenic
CGCTCCAACTCTTGCAAGAA+AGG 0.385173 1_1:+66942952 None:intergenic
ATTAATTTCTGCAAGGGATT+GGG 0.387792 1_1:-66942461 Msa0037770:CDS
AACCCTAATGTCACTCTCCT+TGG 0.388390 1_1:+66940559 None:intergenic
TTCAAAACCCTTTCCGCCGC+CGG 0.394747 1_1:+66946824 None:intergenic
GCCCAAGGAGAGTGACATTA+GGG 0.397893 1_1:-66940561 Msa0037770:three_prime_UTR
CACCCTCACCAAACATCATA+AGG 0.401503 1_1:+66940954 None:intergenic
GTACATAGGAGGCGGCATTA+AGG 0.405640 1_1:+66944589 None:intergenic
CAAGTTGTTGGTAATGTTGA+TGG 0.405812 1_1:-66946467 Msa0037770:CDS
TTGTTGGACTCTTGGTGGTC+AGG 0.407409 1_1:-66944711 Msa0037770:CDS
TGTTCCGAGGATATTGTTCC+AGG 0.409200 1_1:-66944230 Msa0037770:CDS
TATTAATTTCTGCAAGGGAT+TGG 0.410096 1_1:-66942462 Msa0037770:CDS
TTCTGCAGCCTGCCCTTGGA+TGG 0.410351 1_1:-66944015 Msa0037770:CDS
AAGTGGTGTTACATGAATAT+TGG 0.415115 1_1:+66944619 None:intergenic
CTGAAAGAAATGCAGCTAAC+TGG 0.416470 1_1:+66944501 None:intergenic
TCGAAAATTGTCACTGGTGG+CGG 0.419137 1_1:-66944065 Msa0037770:CDS
TGTTTGGATCACGGCTATTA+CGG 0.419395 1_1:-66944672 Msa0037770:CDS
GCTGTCTATGATGCTGCTTT+GGG 0.422327 1_1:-66943042 Msa0037770:CDS
GTCCTGTTTCAATCTGGATA+AGG 0.423537 1_1:-66942677 Msa0037770:CDS
GTAGCGTTGGTCGGAAGTGC+TGG 0.424705 1_1:-66943990 Msa0037770:CDS
GATGAAGTACTGCATCTTGC+CGG 0.424915 1_1:-66942580 Msa0037770:CDS
TAAGCCTTCCTCATATTCAT+TGG 0.425523 1_1:+66942348 None:intergenic
AGGAAGGCTTAGAGAAAGTA+GGG 0.426815 1_1:-66942336 Msa0037770:CDS
TCTTCCTTTCTTGCAAGAGT+TGG 0.427137 1_1:-66942956 Msa0037770:CDS
GAGATGCATTACTCATGGTT+AGG 0.427498 1_1:-66943548 Msa0037770:CDS
AGCTTCCATCAATTGAAACT+TGG 0.430354 1_1:-66944457 Msa0037770:CDS
TCTCATACTGAAACAGTGTT+TGG 0.432357 1_1:-66944398 Msa0037770:CDS
TACTTCCTTCGATTATCTCA+TGG 0.432391 1_1:-66946561 Msa0037770:CDS
ATTATGAGGCTCTAAAGATA+TGG 0.432491 1_1:-66944835 Msa0037770:CDS
CTCTTTCAGCTGCAACTACC+AGG 0.435656 1_1:-66941237 Msa0037770:CDS
TTTGGTCATGACTCATGATT+GGG 0.436988 1_1:-66946375 Msa0037770:CDS
TTCTTCTCATGTACGGGGTA+TGG 0.439570 1_1:-66944549 Msa0037770:CDS
TAGAAGAGAGGACTTAGTTA+AGG 0.442083 1_1:-66942410 Msa0037770:CDS
ATGTTGGCCTCTTCATTTGA+GGG 0.443041 1_1:-66940655 Msa0037770:three_prime_UTR
AGCCTTATCCAGATTGAAAC+AGG 0.443148 1_1:+66942675 None:intergenic
TAACATCTCCACAGTAATCC+AGG 0.444954 1_1:+66942500 None:intergenic
AATGTTGGCCTCTTCATTTG+AGG 0.446858 1_1:-66940656 Msa0037770:three_prime_UTR
CAGAGTAGCAACAATCAATT+CGG 0.446876 1_1:+66940597 None:intergenic
TTGGTGGAAGGAAGAGAGAT+GGG 0.446949 1_1:+66946661 None:intergenic
CCGAGTAGTTTGTAGTATAG+TGG 0.448818 1_1:+66943647 None:intergenic
GCAAGGAAGCTACAGCAAAT+GGG 0.448925 1_1:-66940926 Msa0037770:CDS
TTTAACATAAAGCTCCTACT+TGG 0.449305 1_1:-66940715 Msa0037770:three_prime_UTR
TTTAAAGCATCTTCAAGTAA+TGG 0.449625 1_1:+66943180 None:intergenic
AGTCAGCCTTTGAATTTGTC+AGG 0.449699 1_1:-66943467 Msa0037770:CDS
ACTTAAAGCAAGACGAAGTC+AGG 0.451079 1_1:-66944769 Msa0037770:CDS
TGAAGAAACCTTGTTGTCTA+CGG 0.452105 1_1:+66943299 None:intergenic
GAAGAAACCTTGTTGTCTAC+GGG 0.452531 1_1:+66943300 None:intergenic
GAGAGAGGTGCTAAAATAGT+TGG 0.453853 1_1:-66943693 Msa0037770:CDS
GTACATGAGAAGAAAATGTT+AGG 0.455119 1_1:+66944558 None:intergenic
GAGAAAGAAGCGCTTCTACT+TGG 0.455519 1_1:-66946539 Msa0037770:CDS
TGAAAATTACATACATATAT+GGG 0.456401 1_1:-66943715 Msa0037770:CDS
GTGGGGTGCTTACAGTTGCT+GGG 0.457358 1_1:-66942621 Msa0037770:CDS
AGGAATGACATCCTCTTAGC+AGG 0.460607 1_1:+66942763 None:intergenic
ACGGTTGCGTTCGATGTCTA+AGG 0.464719 1_1:+66946721 None:intergenic
CGATGTCTAAGGCGGAGAAT+CGG 0.467719 1_1:+66946732 None:intergenic
TGCCCAAGGAGAGTGACATT+AGG 0.468125 1_1:-66940562 Msa0037770:three_prime_UTR
CAAGGTTTCTTCAATTCTGA+TGG 0.468375 1_1:-66943289 Msa0037770:CDS
ATCTGTTGTGGTTGGCCGAT+GGG 0.468816 1_1:-66943068 Msa0037770:CDS
TTCAGAGGCTTTGTCGTGGC+GGG 0.469787 1_1:-66940774 Msa0037770:CDS
AGCAATATACCCGAAAAGTA+AGG 0.470663 1_1:-66940811 Msa0037770:CDS
TTTCTAACCGGCGGCGGAAA+GGG 0.471988 1_1:-66946831 None:intergenic
ATTCCAAAGCTCACTAAATG+AGG 0.473123 1_1:-66944294 Msa0037770:CDS
TTCTACTTGGAACTTCGAAC+GGG 0.473345 1_1:-66946526 Msa0037770:CDS
CACACTTACCAATGAATATG+AGG 0.475193 1_1:-66942356 Msa0037770:CDS
AGCCTTTGAATTTGTCAGGC+AGG 0.475691 1_1:-66943463 Msa0037770:CDS
GAGACAAGGGGAAAAGTTGA+GGG 0.475967 1_1:+66942803 None:intergenic
GAGGAAGGCTTAGAGAAAGT+AGG 0.476046 1_1:-66942337 Msa0037770:CDS
GCATATTAACCACACTTGCT+CGG 0.476589 1_1:-66943212 Msa0037770:CDS
CTTCAAGCACTTGGTAAGCC+TGG 0.476943 1_1:-66942541 Msa0037770:CDS
TTGTCGAACAGCTAAGTAAC+GGG 0.477371 1_1:+66942303 None:intergenic
CCTATATCATGGCGAGGAGA+TGG 0.478918 1_1:-66945181 Msa0037770:CDS
AAACGAGTATGCACATACTT+TGG 0.480825 1_1:-66940834 Msa0037770:CDS
CGAAAGTAAGATTTCTGAAG+TGG 0.481177 1_1:-66944901 Msa0037770:CDS
AATAAAAGTTATCCGTGAAA+AGG 0.481467 1_1:-66943154 Msa0037770:CDS
ACTTAGCTGTTCGACAAAGA+AGG 0.484652 1_1:-66942297 Msa0037770:CDS
CCACTATACTACAAACTACT+CGG 0.486362 1_1:-66943647 Msa0037770:CDS
ACCCTAATGTCACTCTCCTT+GGG 0.488636 1_1:+66940560 None:intergenic
CTAAATGAGGGTGCACTTCG+AGG 0.488972 1_1:-66944281 Msa0037770:CDS
AGGAGGCGGCATTAAGGATA+AGG 0.489086 1_1:+66944595 None:intergenic
GTTGCTAATGTTATGCTAGC+TGG 0.490803 1_1:-66943339 Msa0037770:CDS
TTTGGTGGAAGGAAGAGAGA+TGG 0.490867 1_1:+66946660 None:intergenic
TTCTGCAAGGGATTGGGAGG+AGG 0.491272 1_1:-66942455 Msa0037770:CDS
GTGCTATTAATAACTGGAGT+GGG 0.491757 1_1:-66942639 Msa0037770:CDS
TGCGAAGAACTTCAAGCACT+TGG 0.494136 1_1:-66942550 Msa0037770:CDS
GAAAGAAGCAAATTTAGTGT+TGG 0.494704 1_1:-66944938 Msa0037770:CDS
AGAGACAAGGGGAAAAGTTG+AGG 0.496669 1_1:+66942802 None:intergenic
TTGATTTGTTGGACTCTTGG+TGG 0.497144 1_1:-66944716 Msa0037770:CDS
GGACTTAGTTAAGGTTGTGA+AGG 0.497788 1_1:-66942401 Msa0037770:CDS
GGGATTGGGAGGAGGCTATG+AGG 0.500559 1_1:-66942447 Msa0037770:CDS
ATTACAGTCACAGTTCTGAA+TGG 0.503697 1_1:+66940624 None:intergenic
GCTTCCATCAATTGAAACTT+GGG 0.504667 1_1:-66944456 Msa0037770:CDS
TTGGCAGATTGCATGCTAGC+GGG 0.507730 1_1:-66943932 Msa0037770:CDS
ACATCGACCTTAGGCTGAAA+AGG 0.507790 1_1:-66942903 Msa0037770:CDS
GCTGTGACTGAAACCATAAT+GGG 0.508133 1_1:+66944325 None:intergenic
CGCTACATCCATCCAAGGGC+AGG 0.509331 1_1:+66944007 None:intergenic
TATGCAGAATATTTACTGGC+AGG 0.510386 1_1:+66944125 None:intergenic
TGATGAGGAGTTTGCGTTGG+TGG 0.514516 1_1:-66941041 Msa0037770:CDS
GTTTCTAACCGGCGGCGGAA+AGG 0.514670 1_1:-66946832 None:intergenic
AATATGCAAAGCTCCCTAGC+AGG 0.515861 1_1:+66943228 None:intergenic
CACTATACTACAAACTACTC+GGG 0.516970 1_1:-66943646 Msa0037770:CDS
ACCCTCACCAAACATCATAA+GGG 0.517197 1_1:+66940955 None:intergenic
CAAGAGATGCTAGGCGTCAG+AGG 0.518206 1_1:-66941213 Msa0037770:CDS
TGAAACTTGGGAAGAACTAG+AGG 0.518716 1_1:-66944444 Msa0037770:CDS
TTCAAAGCTTCTTCAGCAGA+AGG 0.519242 1_1:+66943093 None:intergenic
TCCCTTATGATGTTTGGTGA+GGG 0.522094 1_1:-66940956 Msa0037770:CDS
AAACTTTCAATTGTCTCAGA+TGG 0.522114 1_1:-66940900 Msa0037770:CDS
CTCTCAAAGAAAACAACGGA+GGG 0.523703 1_1:+66944971 None:intergenic
AAGGAAGTAACGGTATCATC+AGG 0.524676 1_1:+66946575 None:intergenic
ACAGCAATAACTTCACCATC+AGG 0.524800 1_1:+66946419 None:intergenic
TTAGCTGCATTTCTTTCAGA+TGG 0.525741 1_1:-66944497 Msa0037770:CDS
AGATGAAATTGTGGGAAGAG+AGG 0.526056 1_1:+66946690 None:intergenic
TGTCTCATGCTGATGATCAC+AGG 0.526324 1_1:-66943128 Msa0037770:CDS
GTTGCTGGGTTCCTTAATCT+GGG 0.527667 1_1:-66942607 Msa0037770:CDS
TGGAGCAACATCCTATATCA+TGG 0.527676 1_1:-66945192 Msa0037770:CDS
GATGTCATTCCTTGAGGCAT+GGG 0.527728 1_1:-66942752 Msa0037770:CDS
AGCAAATTTAGTGTTGGTGA+AGG 0.528966 1_1:-66944932 Msa0037770:CDS
CTTCTACTTGGAACTTCGAA+CGG 0.530418 1_1:-66946527 Msa0037770:CDS
GAGTTTAATCGGAGAAGTAA+AGG 0.531515 1_1:+66946770 None:intergenic
TGAAGCTGCCAAAATTGCCC+TGG 0.532848 1_1:-66942518 Msa0037770:CDS
GCTAGGCGTCAGAGGAAAAG+AGG 0.538859 1_1:-66941205 Msa0037770:CDS
GGGAAGAGAGGAAGAAGAGA+CGG 0.539244 1_1:+66946702 None:intergenic
ACGCCTAGCATCTCTTGCCC+TGG 0.539640 1_1:+66941219 None:intergenic
CATCTGTTGTGGTTGGCCGA+TGG 0.540186 1_1:-66943069 Msa0037770:CDS
CTCAGACATATTGCTTCTGC+CGG 0.541174 1_1:-66942868 Msa0037770:CDS
CCCTTGGATGGATGTAGCGT+TGG 0.541351 1_1:-66944003 Msa0037770:CDS
AAATTTATTAATTTCTGCAA+GGG 0.541462 1_1:-66942467 Msa0037770:CDS
TAAATTTATTAATTTCTGCA+AGG 0.543456 1_1:-66942468 Msa0037770:CDS
TAGGCTGAAAAGGTTCGAAA+AGG 0.544383 1_1:-66942893 Msa0037770:CDS
ATTTAGAGATGCATTACTCA+TGG 0.545042 1_1:-66943553 Msa0037770:CDS
GGATTGGGAGGAGGCTATGA+GGG 0.545332 1_1:-66942446 Msa0037770:CDS
CTCAAAGAAAACAACGGAGG+GGG 0.549202 1_1:+66944973 None:intergenic
AAGTTCTTCGCAAAGCTCAC+CGG 0.549488 1_1:+66942561 None:intergenic
CAAGGAAGCTACAGCAAATG+GGG 0.550663 1_1:-66940925 Msa0037770:CDS
TGTTGAATGTGAAAATTATG+AGG 0.553607 1_1:-66944849 Msa0037770:CDS
GGCAGATTGCATGCTAGCGG+GGG 0.553872 1_1:-66943930 Msa0037770:CDS
GCGTTGGTGGATCATTTGAA+AGG 0.554314 1_1:-66941028 Msa0037770:CDS
GGAGAAGTAAAGGAACTTCA+CGG 0.554798 1_1:+66946780 None:intergenic
TGCTGATGAGGAGTTTGCGT+TGG 0.555574 1_1:-66941044 Msa0037770:CDS
AATTTCTGCAAGGGATTGGG+AGG 0.555927 1_1:-66942458 Msa0037770:CDS
TACTGTGGAGATGTTAACTC+TGG 0.558526 1_1:-66942493 Msa0037770:CDS
TATTTATCGAAAATTGTCAC+TGG 0.558551 1_1:-66944071 Msa0037770:CDS
GGGAAGTGTAGATGAAATTG+TGG 0.558619 1_1:+66946681 None:intergenic
TAATTGTTGATTACCGTGGT+TGG 0.559167 1_1:-66943503 Msa0037770:CDS
TGGGTTCCTTAATCTGGGAA+AGG 0.561959 1_1:-66942602 Msa0037770:CDS
TTCCCTTATGATGTTTGGTG+AGG 0.562346 1_1:-66940957 Msa0037770:CDS
TGTATTTCGCTCAGTCCTGA+TGG 0.562530 1_1:-66946434 Msa0037770:CDS
TGTTGGCCTCTTCATTTGAG+GGG 0.562918 1_1:-66940654 Msa0037770:three_prime_UTR
TTCGATGACAATGATGATGA+AGG 0.563924 1_1:-66946329 Msa0037770:CDS
TTGTATTGCATTAATGGTGT+AGG 0.564683 1_1:+66942925 None:intergenic
GGCATTAAGGATAAGGAAAG+TGG 0.565757 1_1:+66944602 None:intergenic
GGATGTCATTCCTTGAGGCA+TGG 0.566738 1_1:-66942753 Msa0037770:CDS
GATTGCTGACATGTTCAGGT+TGG 0.566898 1_1:-66944208 Msa0037770:CDS
ACATTCATCAATCTGCATGC+AGG 0.567641 1_1:+66940674 None:intergenic
CTACCAGGGCAAGAGATGCT+AGG 0.571458 1_1:-66941222 Msa0037770:CDS
ATCATCATAATGAGAATCGC+CGG 0.571999 1_1:+66942849 None:intergenic
GTTAGGCTAAATAAGTACAT+AGG 0.572706 1_1:+66944575 None:intergenic
GGAATGAGTGCATACACCAC+AGG 0.573716 1_1:-66942184 Msa0037770:CDS
TACTCATGGTTAGGAGACAT+AGG 0.575225 1_1:-66943539 Msa0037770:CDS
TCTTTGGAACAAGAATATCA+AGG 0.575988 1_1:-66944041 Msa0037770:CDS
GCATGGGGTGATTATCTTAG+CGG 0.576346 1_1:-66942736 Msa0037770:CDS
CTAAATAAGTACATAGGAGG+CGG 0.578094 1_1:+66944581 None:intergenic
TGTGTCCGTTCCCTGTTCAG+AGG 0.579657 1_1:-66943361 Msa0037770:CDS
GATAATCACCCCATGCCTCA+AGG 0.580072 1_1:+66942743 None:intergenic
CATTGTCGATATATTTAATG+GGG 0.580082 1_1:-66943796 Msa0037770:CDS
TTTAAAACTCACCGCTATTG+TGG 0.580970 1_1:-66943010 Msa0037770:CDS
TTTGTCGAACAGCTAAGTAA+CGG 0.581671 1_1:+66942302 None:intergenic
GCAATATACCCGAAAAGTAA+GGG 0.582157 1_1:-66940810 Msa0037770:CDS
AAACACTGTTTCAGTATGAG+AGG 0.584971 1_1:+66944400 None:intergenic
TAACCATACAAGATGTAATG+TGG 0.585823 1_1:+66944373 None:intergenic
GGCAGCAGTCAGATTAGCTG+AGG 0.585826 1_1:-66940879 Msa0037770:CDS
GTCCAACAAATCAACTGCAA+AGG 0.587838 1_1:+66944725 None:intergenic
ATTCAGAGGCTTTGTCGTGG+CGG 0.588096 1_1:-66940775 Msa0037770:CDS
GGATGAAATGCATGATTCAG+AGG 0.589037 1_1:-66940789 Msa0037770:CDS
AGCAACCTCTGAACAGGGAA+CGG 0.589210 1_1:+66943356 None:intergenic
AGCATTACTTGCCTCTTCAG+AGG 0.590765 1_1:-66945083 Msa0037770:CDS
AGAGAAAGTAGGGAAGTACT+TGG 0.591990 1_1:-66942326 Msa0037770:CDS
TTTGAAACATCTGTTGTGGT+TGG 0.592108 1_1:-66943076 Msa0037770:CDS
TTTCTCCATGAGATAATCGA+AGG 0.592601 1_1:+66946556 None:intergenic
GCGAACGTGACTCAAGTTGT+TGG 0.593666 1_1:-66946479 Msa0037770:CDS
GAAAGGCATGTCTATGAGAG+TGG 0.594080 1_1:-66941011 Msa0037770:CDS
GGGAGTTAGACTCAAAGTAT+GGG 0.594519 1_1:-66943776 Msa0037770:CDS
GTTGTTGGTAATGTTGATGG+TGG 0.596537 1_1:-66946464 Msa0037770:CDS
GAGATAATCGAAGGAAGTAA+CGG 0.597064 1_1:+66946565 None:intergenic
TGGATGGATGTAGCGTTGGT+CGG 0.597806 1_1:-66943999 Msa0037770:CDS
TTCCAAAGCTCACTAAATGA+GGG 0.599705 1_1:-66944293 Msa0037770:CDS
AAAGCATCTTCAAGTAATGG+AGG 0.600148 1_1:+66943183 None:intergenic
TCATCGTTTCTAACCGGCGG+CGG 0.603795 1_1:-66946837 None:intergenic
ATCATAGACAGCATCCCCAT+CGG 0.605005 1_1:+66943053 None:intergenic
GGCATTCAATGCCACAATAG+CGG 0.606077 1_1:+66942999 None:intergenic
AAATTTCCCCGTAGACAACA+AGG 0.606549 1_1:-66943307 Msa0037770:CDS
TCCGTTGCACTAGTCATCGA+TGG 0.607635 1_1:-66944644 Msa0037770:CDS
ACCAACGCTACATCCATCCA+AGG 0.608980 1_1:+66944002 None:intergenic
TGGCAGATTGCATGCTAGCG+GGG 0.609187 1_1:-66943931 Msa0037770:CDS
TTCGAACCCCTCAAATGAAG+AGG 0.609441 1_1:+66940648 None:intergenic
GGAAGTGTAGATGAAATTGT+GGG 0.609654 1_1:+66946682 None:intergenic
CGTGCTATTAATAACTGGAG+TGG 0.610155 1_1:-66942640 Msa0037770:CDS
TGTGTGGTTCTAATTTATCA+CGG 0.610652 1_1:-66945135 Msa0037770:CDS
GCATGCAGATTGATGAATGT+TGG 0.611259 1_1:-66940671 Msa0037770:three_prime_UTR
CAATCCTGGAACAATATCCT+CGG 0.612040 1_1:+66944226 None:intergenic
CTTACCAATGAATATGAGGA+AGG 0.612058 1_1:-66942352 Msa0037770:CDS
AGGCTAAATAAGTACATAGG+AGG 0.613781 1_1:+66944578 None:intergenic
TTATCGAAAATTGTCACTGG+TGG 0.614388 1_1:-66944068 Msa0037770:CDS
GGAATGACATCCTCTTAGCA+GGG 0.615161 1_1:+66942764 None:intergenic
GAATCGGAAAGTTTCGTCGT+CGG 0.615189 1_1:+66946748 None:intergenic
TCTGTTGTGGTTGGCCGATG+GGG 0.616135 1_1:-66943067 Msa0037770:CDS
TCAAAGCTTCTTCAGCAGAA+GGG 0.616661 1_1:+66943094 None:intergenic
GACCTGCCTGACAAATTCAA+AGG 0.616827 1_1:+66943461 None:intergenic
ATATGCAAAGCTCCCTAGCA+GGG 0.617678 1_1:+66943229 None:intergenic
TACATACATATATGGGAGAG+AGG 0.620907 1_1:-66943708 Msa0037770:CDS
AGCTTCTTCAGCAGAAGGGT+AGG 0.621709 1_1:+66943098 None:intergenic
CTCAGGTCAAGATACCTCCC+AGG 0.621969 1_1:+66941172 None:intergenic
TGAAGATGATGCTGCTTCAG+AGG 0.623423 1_1:-66942224 Msa0037770:CDS
AATAGAATTGGAATGTTCCG+AGG 0.626845 1_1:-66944243 Msa0037770:CDS
AAGCTTTGAAACATCTGTTG+TGG 0.627629 1_1:-66943080 Msa0037770:CDS
TGAAATGAAAGTACTGCCCA+AGG 0.627857 1_1:-66940576 Msa0037770:three_prime_UTR
GAAACTTGGGAAGAACTAGA+GGG 0.629021 1_1:-66944443 Msa0037770:CDS
CTCCAATCAGAGAAACGTGA+AGG 0.633262 1_1:-66942256 Msa0037770:CDS
AATGTAATTGTTGATTACCG+TGG 0.633951 1_1:-66943507 Msa0037770:CDS
AACATCTCCACAGTAATCCA+GGG 0.635223 1_1:+66942501 None:intergenic
TGCAATACAACATCGACCTT+AGG 0.636196 1_1:-66942912 Msa0037770:CDS
AGGCTCACTCCGAGCAAGTG+TGG 0.637620 1_1:+66943203 None:intergenic
TTATGATGATTGTATGACAC+TGG 0.641082 1_1:-66942836 Msa0037770:CDS
GGTCAAGATACCTCCCAGGA+CGG 0.643264 1_1:+66941176 None:intergenic
ATGATTCAGAGGCTTTGTCG+TGG 0.646724 1_1:-66940778 Msa0037770:CDS
TCCAACATAAAATTCCAAGT+AGG 0.648674 1_1:+66940701 None:intergenic
ATGTCATTCCTTGAGGCATG+GGG 0.650240 1_1:-66942751 Msa0037770:CDS
GAATGAGTGCATACACCACA+GGG 0.652356 1_1:-66942183 Msa0037770:intron
ATCAGGTTCAAGATCAACGA+TGG 0.652862 1_1:+66946592 None:intergenic
GCTAATGTTATGCTAGCTGG+AGG 0.656120 1_1:-66943336 Msa0037770:CDS
GCCATCGATGACTAGTGCAA+CGG 0.656192 1_1:+66944643 None:intergenic
AAGACGAAGTCAGGTTCATG+TGG 0.657112 1_1:-66944760 Msa0037770:CDS
CAACATCCTATATCATGGCG+AGG 0.662436 1_1:-66945187 Msa0037770:CDS
TAAGAGGATGTCATTCCTTG+AGG 0.663902 1_1:-66942758 Msa0037770:CDS
ACTATACTACAAACTACTCG+GGG 0.664577 1_1:-66943645 Msa0037770:CDS
ACATTAGCAACCTCTGAACA+GGG 0.664902 1_1:+66943351 None:intergenic
ATTGGCAGATTGCATGCTAG+CGG 0.666563 1_1:-66943933 Msa0037770:CDS
TCTTTCAGCTGCAACTACCA+GGG 0.670227 1_1:-66941236 Msa0037770:CDS
AGTAGCAACAATCAATTCGG+CGG 0.674789 1_1:+66940600 None:intergenic
TCTCAAAGAAAACAACGGAG+GGG 0.677343 1_1:+66944972 None:intergenic
GCAGATTGCATGCTAGCGGG+GGG 0.678001 1_1:-66943929 Msa0037770:CDS
ATTTCTCTCAAAGAAAACAA+CGG 0.684432 1_1:+66944967 None:intergenic
GTTGCGTTCGATGTCTAAGG+CGG 0.687190 1_1:+66946724 None:intergenic
TGCTATTAATAACTGGAGTG+GGG 0.687914 1_1:-66942638 Msa0037770:CDS
AAAATTGCCCTGGATTACTG+TGG 0.690388 1_1:-66942508 Msa0037770:CDS
TTGGTGAGGGTGAAACTGCA+AGG 0.690578 1_1:-66940943 Msa0037770:CDS
TCTCTCAAAGAAAACAACGG+AGG 0.692996 1_1:+66944970 None:intergenic
TTTGCTACGATGAGTATGTG+TGG 0.700039 1_1:-66945151 Msa0037770:CDS
AAACTTGGGAAGAACTAGAG+GGG 0.708599 1_1:-66944442 Msa0037770:CDS
AAGGAAGCTACAGCAAATGG+GGG 0.711546 1_1:-66940924 Msa0037770:CDS
AAGAAACCTTGTTGTCTACG+GGG 0.719132 1_1:+66943301 None:intergenic
CCAACGCTACATCCATCCAA+GGG 0.719981 1_1:+66944003 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATAAAATTTGAAAGAA+AGG + chr1_1:66941032-66941051 None:intergenic 10.0%
!!! TTCAAATTTTATTATAATCT+TGG - chr1_1:66941036-66941055 Msa0037770:CDS 10.0%
!! ATCTATATATATTTGTATTT+AGG - chr1_1:66941945-66941964 Msa0037770:intron 10.0%
!! TTAATTAAAATAAGTCTGTT+CGG - chr1_1:66941441-66941460 Msa0037770:intron 15.0%
!! ATGAAAATTACATACATATA+TGG - chr1_1:66943594-66943613 Msa0037770:CDS 15.0%
!! TGAAAATTACATACATATAT+GGG - chr1_1:66943595-66943614 Msa0037770:CDS 15.0%
!! TAAATTTATTAATTTCTGCA+AGG - chr1_1:66944842-66944861 Msa0037770:CDS 15.0%
!! AAATTTATTAATTTCTGCAA+GGG - chr1_1:66944843-66944862 Msa0037770:CDS 15.0%
!! GTTCATTATAATATGTTATA+AGG + chr1_1:66945275-66945294 None:intergenic 15.0%
!! ATTTAATACATGAAAGATTA+TGG + chr1_1:66945323-66945342 None:intergenic 15.0%
!! ATATAGTTATAGTTATTTGT+GGG - chr1_1:66945597-66945616 Msa0037770:intron 15.0%
!! AATGAATAGAAAAATAAACA+CGG + chr1_1:66945917-66945936 None:intergenic 15.0%
!!! TTTTAGAAAAAGAATAACAA+AGG - chr1_1:66945935-66945954 Msa0037770:intron 15.0%
!! GTATAAATTAAGTGTATGTT+TGG - chr1_1:66941058-66941077 Msa0037770:intron 20.0%
!!! TAAATTGATTGATTTGATTC+TGG - chr1_1:66941105-66941124 Msa0037770:intron 20.0%
!! TTTGGATAGATTTATGTTAA+AGG - chr1_1:66941155-66941174 Msa0037770:intron 20.0%
!!! TAATTTAGGAGGTATATAAT+TGG + chr1_1:66941308-66941327 None:intergenic 20.0%
!!! TATACCTCCTAAATTAATTT+TGG - chr1_1:66941312-66941331 Msa0037770:intron 20.0%
!! AATAAGTTAAAAACAACTTG+TGG - chr1_1:66941631-66941650 Msa0037770:intron 20.0%
!!! AGTTTTTATAAGCTTATATG+TGG - chr1_1:66941765-66941784 Msa0037770:intron 20.0%
!! TGAAAGAAGTTTATCTAAAT+TGG - chr1_1:66941922-66941941 Msa0037770:intron 20.0%
!!! TGTATTCTTATTTGCAAATT+TGG - chr1_1:66942018-66942037 Msa0037770:intron 20.0%
!!! TTACAGTTTACAATTTTGTT+TGG - chr1_1:66942622-66942641 Msa0037770:CDS 20.0%
!! ACATTGTCGATATATTTAAT+GGG - chr1_1:66943513-66943532 Msa0037770:CDS 20.0%
!!! AAATTCTTTTGGATCTTTTT+GGG + chr1_1:66944335-66944354 None:intergenic 20.0%
!! AAGTATATAGCAATGTATAT+GGG + chr1_1:66945171-66945190 None:intergenic 20.0%
!! AAAGTATATAGCAATGTATA+TGG + chr1_1:66945172-66945191 None:intergenic 20.0%
!! ATATACATTGCTATATACTT+TGG - chr1_1:66945171-66945190 Msa0037770:CDS 20.0%
!!! ATATACAAAAGCATGTTAAA+TGG + chr1_1:66945211-66945230 None:intergenic 20.0%
!! ATTATAATATGTTATAAGGC+CGG + chr1_1:66945271-66945290 None:intergenic 20.0%
!! CATATAGTTATAGTTATTTG+TGG - chr1_1:66945596-66945615 Msa0037770:intron 20.0%
! GCTTAAAGTTAGAATCAATT+TGG - chr1_1:66941238-66941257 Msa0037770:CDS 25.0%
! TAAAGTTAGAATCAATTTGG+AGG - chr1_1:66941241-66941260 Msa0037770:CDS 25.0%
! TTATCATACAAATTACACCT+TGG + chr1_1:66941355-66941374 None:intergenic 25.0%
!!! CAATTATAAAAGCACTTACA+CGG + chr1_1:66941506-66941525 None:intergenic 25.0%
! ACTTATTTGAGCTTATCTAT+TGG + chr1_1:66941701-66941720 None:intergenic 25.0%
! ATAAGCTTATAAAAACTTCC+CGG + chr1_1:66941762-66941781 None:intergenic 25.0%
! CAAATAAGAATACAGCTATA+AGG + chr1_1:66942012-66942031 None:intergenic 25.0%
!!! TTGTATTACTGTTTTTCAGA+TGG - chr1_1:66942084-66942103 Msa0037770:intron 25.0%
! ATTTCTCTCAAAGAAAACAA+CGG + chr1_1:66942346-66942365 None:intergenic 25.0%
! TGTTGAATGTGAAAATTATG+AGG - chr1_1:66942461-66942480 Msa0037770:CDS 25.0%
!!! TTACAATTTTGTTTGGATCA+CGG - chr1_1:66942629-66942648 Msa0037770:CDS 25.0%
!! TAACATTTTCTTCTCATGTA+CGG - chr1_1:66942754-66942773 Msa0037770:CDS 25.0%
! CATATATGCAGAATATTTAC+TGG + chr1_1:66943192-66943211 None:intergenic 25.0%
! TATTTATCGAAAATTGTCAC+TGG - chr1_1:66943239-66943258 Msa0037770:CDS 25.0%
!! TTTCTCATTTTACTCGAATT+TGG - chr1_1:66943430-66943449 Msa0037770:CDS 25.0%
! GACATTGTCGATATATTTAA+TGG - chr1_1:66943512-66943531 Msa0037770:CDS 25.0%
! CATTGTCGATATATTTAATG+GGG - chr1_1:66943514-66943533 Msa0037770:CDS 25.0%
!! AAAATAGTTGGAGTTTTACA+TGG - chr1_1:66943629-66943648 Msa0037770:CDS 25.0%
! ATGTATATACCCTAGAAAAT+TGG - chr1_1:66943697-66943716 Msa0037770:CDS 25.0%
!! AAACCAAAACCAATTTTCTA+GGG + chr1_1:66943709-66943728 None:intergenic 25.0%
!! TTTAAAGCATCTTCAAGTAA+TGG + chr1_1:66944133-66944152 None:intergenic 25.0%
! AATAAAAGTTATCCGTGAAA+AGG - chr1_1:66944156-66944175 Msa0037770:CDS 25.0%
!! GAAATTCTTTTGGATCTTTT+TGG + chr1_1:66944336-66944355 None:intergenic 25.0%
!! AAGAAAGGAAGAAATTCTTT+TGG + chr1_1:66944346-66944365 None:intergenic 25.0%
! AAACAAATATTATCCAGACT+TGG + chr1_1:66945729-66945748 None:intergenic 25.0%
! TAAATGACTAAATCAAACCT+AGG + chr1_1:66945859-66945878 None:intergenic 25.0%
! ATATTCTTGATTTCATCAAC+AGG - chr1_1:66946025-66946044 Msa0037770:intron 25.0%
!! TTTAGTCTTTAGATATGTAG+TGG + chr1_1:66946215-66946234 None:intergenic 25.0%
AGTTGAAGGTGATTTATGTT+TGG - chr1_1:66941137-66941156 Msa0037770:intron 30.0%
!! AACTTCAATTCTAGAATCAG+AGG - chr1_1:66941203-66941222 Msa0037770:CDS 30.0%
!!! TAAATTAATTTTGGCTCCTC+CGG - chr1_1:66941321-66941340 Msa0037770:intron 30.0%
AAAGTGGGAAACAACATAAA+AGG + chr1_1:66941383-66941402 None:intergenic 30.0%
GAACTCTAGTTAACTTCTAT+CGG + chr1_1:66941791-66941810 None:intergenic 30.0%
TTCAGATGGAGAAAACTTTA+TGG - chr1_1:66942098-66942117 Msa0037770:intron 30.0%
!! TGTGTGGTTCTAATTTATCA+CGG - chr1_1:66942175-66942194 Msa0037770:intron 30.0%
TATCACGGAAACTTAAGATT+TGG - chr1_1:66942190-66942209 Msa0037770:CDS 30.0%
ATCACGGAAACTTAAGATTT+GGG - chr1_1:66942191-66942210 Msa0037770:CDS 30.0%
!! GTTGTTTTCTTTGAGAGAAA+TGG - chr1_1:66942345-66942364 Msa0037770:CDS 30.0%
GAAAGAAGCAAATTTAGTGT+TGG - chr1_1:66942372-66942391 Msa0037770:CDS 30.0%
!! ATTATGAGGCTCTAAAGATA+TGG - chr1_1:66942475-66942494 Msa0037770:CDS 30.0%
!!! GGTATTTTAGCAACAATCAT+TGG - chr1_1:66942496-66942515 Msa0037770:CDS 30.0%
AGTATCTAATTTCATGCTTC+AGG + chr1_1:66942524-66942543 None:intergenic 30.0%
!! AAGTGGTGTTACATGAATAT+TGG + chr1_1:66942694-66942713 None:intergenic 30.0%
GTTAGGCTAAATAAGTACAT+AGG + chr1_1:66942738-66942757 None:intergenic 30.0%
GTACATGAGAAGAAAATGTT+AGG + chr1_1:66942755-66942774 None:intergenic 30.0%
! AACATTTTCTTCTCATGTAC+GGG - chr1_1:66942755-66942774 Msa0037770:CDS 30.0%
TAACCATACAAGATGTAATG+TGG + chr1_1:66942940-66942959 None:intergenic 30.0%
CTATTTGCAGGAAATAGAAT+TGG - chr1_1:66943055-66943074 Msa0037770:CDS 30.0%
! CATATATGCAGTTTTCTGAT+GGG - chr1_1:66943204-66943223 Msa0037770:CDS 30.0%
!! TCTTTGGAACAAGAATATCA+AGG - chr1_1:66943269-66943288 Msa0037770:CDS 30.0%
!! TTCTAGGGTATATACATTCT+AGG + chr1_1:66943694-66943713 None:intergenic 30.0%
!! ATACCCTAGAAAATTGGTTT+TGG - chr1_1:66943703-66943722 Msa0037770:CDS 30.0%
! GAAACCAAAACCAATTTTCT+AGG + chr1_1:66943710-66943729 None:intergenic 30.0%
!! TCTAAATCGCTTTTGAACTA+AGG + chr1_1:66943744-66943763 None:intergenic 30.0%
ATTTAGAGATGCATTACTCA+TGG - chr1_1:66943757-66943776 Msa0037770:CDS 30.0%
! AATGTAATTGTTGATTACCG+TGG - chr1_1:66943803-66943822 Msa0037770:CDS 30.0%
TTGTATTGCATTAATGGTGT+AGG + chr1_1:66944388-66944407 None:intergenic 30.0%
TCGATGTTGTATTGCATTAA+TGG + chr1_1:66944394-66944413 None:intergenic 30.0%
TAAAAAGTTGAAGAGACAAG+GGG + chr1_1:66944522-66944541 None:intergenic 30.0%
GTAAAAAGTTGAAGAGACAA+GGG + chr1_1:66944523-66944542 None:intergenic 30.0%
AGTAAAAAGTTGAAGAGACA+AGG + chr1_1:66944524-66944543 None:intergenic 30.0%
! CTTATCGTGCTATTAATAAC+TGG - chr1_1:66944665-66944684 Msa0037770:CDS 30.0%
TATTAATTTCTGCAAGGGAT+TGG - chr1_1:66944848-66944867 Msa0037770:CDS 30.0%
ATTAATTTCTGCAAGGGATT+GGG - chr1_1:66944849-66944868 Msa0037770:CDS 30.0%
!! TGTTTTTATGCATAGAAGAG+AGG - chr1_1:66944888-66944907 Msa0037770:CDS 30.0%
CTGTTTATTTGTGTATGTGT+TGG - chr1_1:66945545-66945564 Msa0037770:intron 30.0%
AAATATTATCCAGACTTGGA+CGG + chr1_1:66945725-66945744 None:intergenic 30.0%
CATTGAAGAAATGAGACATT+AGG + chr1_1:66945807-66945826 None:intergenic 30.0%
AAACCTAGGTAAAATTGAAC+AGG + chr1_1:66945845-66945864 None:intergenic 30.0%
ATTGCTACACAAAAAATCTC+AGG + chr1_1:66946158-66946177 None:intergenic 30.0%
TAGTGGCTAATGAAAAATGA+AGG + chr1_1:66946198-66946217 None:intergenic 30.0%
AAACTTTCAATTGTCTCAGA+TGG - chr1_1:66946410-66946429 Msa0037770:CDS 30.0%
TTTAACATAAAGCTCCTACT+TGG - chr1_1:66946595-66946614 Msa0037770:CDS 30.0%
! TCCTACTTGGAATTTTATGT+TGG - chr1_1:66946608-66946627 Msa0037770:CDS 30.0%
TCCAACATAAAATTCCAAGT+AGG + chr1_1:66946612-66946631 None:intergenic 30.0%
GAGTTTAATCGGAGAAGTAA+AGG + chr1_1:66940543-66940562 None:intergenic 35.0%
! GGAAGTGTAGATGAAATTGT+GGG + chr1_1:66940631-66940650 None:intergenic 35.0%
!! TGTTACTCCAAGCTTGTTTT+TGG + chr1_1:66940671-66940690 None:intergenic 35.0%
GAGATAATCGAAGGAAGTAA+CGG + chr1_1:66940748-66940767 None:intergenic 35.0%
TACTTCCTTCGATTATCTCA+TGG - chr1_1:66940749-66940768 Msa0037770:CDS 35.0%
TTTCTCCATGAGATAATCGA+AGG + chr1_1:66940757-66940776 None:intergenic 35.0%
!! CAAGTTGTTGGTAATGTTGA+TGG - chr1_1:66940843-66940862 Msa0037770:CDS 35.0%
GAAGTTATTGCTGTAGTTAC+TGG - chr1_1:66940900-66940919 Msa0037770:CDS 35.0%
!!! ATTGCTGTAGTTACTGGTTT+TGG - chr1_1:66940906-66940925 Msa0037770:CDS 35.0%
! TTTTGGTCATGACTCATGAT+TGG - chr1_1:66940934-66940953 Msa0037770:CDS 35.0%
TTTGGTCATGACTCATGATT+GGG - chr1_1:66940935-66940954 Msa0037770:CDS 35.0%
! TTCGATGACAATGATGATGA+AGG - chr1_1:66940981-66941000 Msa0037770:CDS 35.0%
! TCTGGCTAAAAGTAAGTTGA+AGG - chr1_1:66941123-66941142 Msa0037770:intron 35.0%
GGAGCCAAAATTAATTTAGG+AGG + chr1_1:66941319-66941338 None:intergenic 35.0%
GGAGGAGCCAAAATTAATTT+AGG + chr1_1:66941322-66941341 None:intergenic 35.0%
CTGTAGCTTACGAAAAAAAC+AGG + chr1_1:66941593-66941612 None:intergenic 35.0%
!!! GTTTTTTTCGTAAGCTACAG+TGG - chr1_1:66941593-66941612 Msa0037770:intron 35.0%
CCATAAACTTATGGTCTCTT+TGG + chr1_1:66941728-66941747 None:intergenic 35.0%
CCAAAGAGACCATAAGTTTA+TGG - chr1_1:66941725-66941744 Msa0037770:intron 35.0%
AAGAGACCATAAGTTTATGG+TGG - chr1_1:66941728-66941747 Msa0037770:intron 35.0%
ACTGAACCACCATAAACTTA+TGG + chr1_1:66941737-66941756 None:intergenic 35.0%
!! AAAAGCTTTTTCCTCTGAAG+AGG + chr1_1:66942241-66942260 None:intergenic 35.0%
!! AGCAAATTTAGTGTTGGTGA+AGG - chr1_1:66942378-66942397 Msa0037770:CDS 35.0%
! CGAAAGTAAGATTTCTGAAG+TGG - chr1_1:66942409-66942428 Msa0037770:CDS 35.0%
!! AACCTTTGCAGTTGATTTGT+TGG - chr1_1:66942583-66942602 Msa0037770:CDS 35.0%
CTAAATAAGTACATAGGAGG+CGG + chr1_1:66942732-66942751 None:intergenic 35.0%
AGGCTAAATAAGTACATAGG+AGG + chr1_1:66942735-66942754 None:intergenic 35.0%
! ACATTTTCTTCTCATGTACG+GGG - chr1_1:66942756-66942775 Msa0037770:CDS 35.0%
TTAGCTGCATTTCTTTCAGA+TGG - chr1_1:66942813-66942832 Msa0037770:CDS 35.0%
AGCTTCCATCAATTGAAACT+TGG - chr1_1:66942853-66942872 Msa0037770:CDS 35.0%
GCTTCCATCAATTGAAACTT+GGG - chr1_1:66942854-66942873 Msa0037770:CDS 35.0%
TCTTCCCAAGTTTCAATTGA+TGG + chr1_1:66942861-66942880 None:intergenic 35.0%
AAACACTGTTTCAGTATGAG+AGG + chr1_1:66942913-66942932 None:intergenic 35.0%
TCTCATACTGAAACAGTGTT+TGG - chr1_1:66942912-66942931 Msa0037770:CDS 35.0%
GATCCACATTACATCTTGTA+TGG - chr1_1:66942934-66942953 Msa0037770:CDS 35.0%
ATTCCAAAGCTCACTAAATG+AGG - chr1_1:66943016-66943035 Msa0037770:CDS 35.0%
TTCCAAAGCTCACTAAATGA+GGG - chr1_1:66943017-66943036 Msa0037770:CDS 35.0%
AATAGAATTGGAATGTTCCG+AGG - chr1_1:66943067-66943086 Msa0037770:CDS 35.0%
!! ACACTTGAAGAGCTTGTTAT+TGG - chr1_1:66943149-66943168 Msa0037770:CDS 35.0%
GAATATTTACTGGCAGGATT+TGG + chr1_1:66943182-66943201 None:intergenic 35.0%
TATGCAGAATATTTACTGGC+AGG + chr1_1:66943188-66943207 None:intergenic 35.0%
! GCATATATGCAGTTTTCTGA+TGG - chr1_1:66943203-66943222 Msa0037770:CDS 35.0%
TTATCGAAAATTGTCACTGG+TGG - chr1_1:66943242-66943261 Msa0037770:CDS 35.0%
TACATACATATATGGGAGAG+AGG - chr1_1:66943602-66943621 Msa0037770:CDS 35.0%
CCACTATACTACAAACTACT+CGG - chr1_1:66943663-66943682 Msa0037770:CDS 35.0%
CACTATACTACAAACTACTC+GGG - chr1_1:66943664-66943683 Msa0037770:CDS 35.0%
ACTATACTACAAACTACTCG+GGG - chr1_1:66943665-66943684 Msa0037770:CDS 35.0%
! TAATTGTTGATTACCGTGGT+TGG - chr1_1:66943807-66943826 Msa0037770:CDS 35.0%
! TGAAGAAACCTTGTTGTCTA+CGG + chr1_1:66944014-66944033 None:intergenic 35.0%
CAAGGTTTCTTCAATTCTGA+TGG - chr1_1:66944021-66944040 Msa0037770:CDS 35.0%
! GTCTTCAAGTGCTTTTCTTA+TGG + chr1_1:66944047-66944066 None:intergenic 35.0%
! AAAGCATCTTCAAGTAATGG+AGG + chr1_1:66944130-66944149 None:intergenic 35.0%
!! AAGCTTTGAAACATCTGTTG+TGG - chr1_1:66944230-66944249 Msa0037770:CDS 35.0%
! TTTGAAACATCTGTTGTGGT+TGG - chr1_1:66944234-66944253 Msa0037770:CDS 35.0%
! TTTAAAACTCACCGCTATTG+TGG - chr1_1:66944300-66944319 Msa0037770:CDS 35.0%
ATCATCATAATGAGAATCGC+CGG + chr1_1:66944464-66944483 None:intergenic 35.0%
TTACTTGTCCTGTTTCAATC+TGG - chr1_1:66944627-66944646 Msa0037770:CDS 35.0%
! GTGCTATTAATAACTGGAGT+GGG - chr1_1:66944671-66944690 Msa0037770:CDS 35.0%
TGCTATTAATAACTGGAGTG+GGG - chr1_1:66944672-66944691 Msa0037770:CDS 35.0%
TAGAAGAGAGGACTTAGTTA+AGG - chr1_1:66944900-66944919 Msa0037770:CDS 35.0%
CACACTTACCAATGAATATG+AGG - chr1_1:66944954-66944973 Msa0037770:CDS 35.0%
CTTACCAATGAATATGAGGA+AGG - chr1_1:66944958-66944977 Msa0037770:CDS 35.0%
TAAGCCTTCCTCATATTCAT+TGG + chr1_1:66944965-66944984 None:intergenic 35.0%
TTTGTCGAACAGCTAAGTAA+CGG + chr1_1:66945011-66945030 None:intergenic 35.0%
TAGCAATGTATATGGGATCA+AGG + chr1_1:66945164-66945183 None:intergenic 35.0%
TCCTCAGAGTCAAAGAAAAT+CGG + chr1_1:66945242-66945261 None:intergenic 35.0%
!! ATTTTCTTTGACTCTGAGGA+TGG - chr1_1:66945242-66945261 Msa0037770:intron 35.0%
AGATTATGGAAATACCACTG+TGG + chr1_1:66945309-66945328 None:intergenic 35.0%
TAACAATGGGGACAATTCAA+AGG + chr1_1:66945438-66945457 None:intergenic 35.0%
AACCACTAGGTTGTAACAAT+GGG + chr1_1:66945451-66945470 None:intergenic 35.0%
AAACCACTAGGTTGTAACAA+TGG + chr1_1:66945452-66945471 None:intergenic 35.0%
ATTGTTACAACCTAGTGGTT+TGG - chr1_1:66945451-66945470 Msa0037770:intron 35.0%
CAAATAAACAGACACACACA+AGG + chr1_1:66945536-66945555 None:intergenic 35.0%
!! ACAATGATTTTTCAATCCCG+AGG + chr1_1:66945642-66945661 None:intergenic 35.0%
ACCATCCTTATTATTTGACC+TGG - chr1_1:66945753-66945772 Msa0037770:intron 35.0%
CCATCCTTATTATTTGACCT+GGG - chr1_1:66945754-66945773 Msa0037770:intron 35.0%
TTGGTTTCCCTTATGATGTT+TGG - chr1_1:66946348-66946367 Msa0037770:CDS 35.0%
AGTATGTGCATACTCGTTTA+TGG + chr1_1:66946475-66946494 None:intergenic 35.0%
AAACGAGTATGCACATACTT+TGG - chr1_1:66946476-66946495 Msa0037770:CDS 35.0%
AGCAATATACCCGAAAAGTA+AGG - chr1_1:66946499-66946518 Msa0037770:CDS 35.0%
GCAATATACCCGAAAAGTAA+GGG - chr1_1:66946500-66946519 Msa0037770:CDS 35.0%
!! CATTTCATCCCTTACTTTTC+GGG + chr1_1:66946511-66946530 None:intergenic 35.0%
!! GCATTTCATCCCTTACTTTT+CGG + chr1_1:66946512-66946531 None:intergenic 35.0%
!! ATTACAGTCACAGTTCTGAA+TGG + chr1_1:66946689-66946708 None:intergenic 35.0%
CAGAGTAGCAACAATCAATT+CGG + chr1_1:66946716-66946735 None:intergenic 35.0%
! GAACTTCACGGAAGAGTTTT+AGG + chr1_1:66940521-66940540 None:intergenic 40.0%
GGAGAAGTAAAGGAACTTCA+CGG + chr1_1:66940533-66940552 None:intergenic 40.0%
TTTCGTCGTCGGAGTTTAAT+CGG + chr1_1:66940554-66940573 None:intergenic 40.0%
AGATGAAATTGTGGGAAGAG+AGG + chr1_1:66940623-66940642 None:intergenic 40.0%
! GGGAAGTGTAGATGAAATTG+TGG + chr1_1:66940632-66940651 None:intergenic 40.0%
!!! TACTCCAAGCTTGTTTTTGG+TGG + chr1_1:66940668-66940687 None:intergenic 40.0%
ATCAGGTTCAAGATCAACGA+TGG + chr1_1:66940721-66940740 None:intergenic 40.0%
AAGGAAGTAACGGTATCATC+AGG + chr1_1:66940738-66940757 None:intergenic 40.0%
CTTCTACTTGGAACTTCGAA+CGG - chr1_1:66940783-66940802 Msa0037770:CDS 40.0%
TTCTACTTGGAACTTCGAAC+GGG - chr1_1:66940784-66940803 Msa0037770:CDS 40.0%
!! GTTGTTGGTAATGTTGATGG+TGG - chr1_1:66940846-66940865 Msa0037770:CDS 40.0%
ACAGCAATAACTTCACCATC+AGG + chr1_1:66940894-66940913 None:intergenic 40.0%
!!! TGTAGTTACTGGTTTTGGTC+AGG - chr1_1:66940911-66940930 Msa0037770:CDS 40.0%
!!! TACTGGTTTTGGTCAGGTTT+TGG - chr1_1:66940917-66940936 Msa0037770:CDS 40.0%
TGAAGGTCATCACGTAAGTA+AGG - chr1_1:66940998-66941017 Msa0037770:CDS 40.0%
TTACACCTTGGTTTCACTTC+CGG + chr1_1:66941343-66941362 None:intergenic 40.0%
! TTTCCCACTTTCGATTCGAT+TGG - chr1_1:66941392-66941411 Msa0037770:intron 40.0%
AAGCCAATCGAATCGAAAGT+GGG + chr1_1:66941398-66941417 None:intergenic 40.0%
AAAGCCAATCGAATCGAAAG+TGG + chr1_1:66941399-66941418 None:intergenic 40.0%
AAACACATGTGAGACTGTTC+AGG + chr1_1:66941675-66941694 None:intergenic 40.0%
GTTTATGGTGGTTCAGTTAC+CGG - chr1_1:66941740-66941759 Msa0037770:intron 40.0%
TTTATGGTGGTTCAGTTACC+GGG - chr1_1:66941741-66941760 Msa0037770:intron 40.0%
GTTCTCTCTTTATGTAGAGC+TGG - chr1_1:66942048-66942067 Msa0037770:intron 40.0%
TGGAGCAACATCCTATATCA+TGG - chr1_1:66942118-66942137 Msa0037770:intron 40.0%
TTTGCTACGATGAGTATGTG+TGG - chr1_1:66942159-66942178 Msa0037770:intron 40.0%
AAGATTTGGGAACGAGATTC+AGG - chr1_1:66942204-66942223 Msa0037770:CDS 40.0%
! TCAGAGGAAAAAGCTTTTGC+AGG - chr1_1:66942243-66942262 Msa0037770:CDS 40.0%
TCTCAAAGAAAACAACGGAG+GGG + chr1_1:66942341-66942360 None:intergenic 40.0%
CTCTCAAAGAAAACAACGGA+GGG + chr1_1:66942342-66942361 None:intergenic 40.0%
TCTCTCAAAGAAAACAACGG+AGG + chr1_1:66942343-66942362 None:intergenic 40.0%
ACTTAAAGCAAGACGAAGTC+AGG - chr1_1:66942541-66942560 Msa0037770:CDS 40.0%
GTCCAACAAATCAACTGCAA+AGG + chr1_1:66942588-66942607 None:intergenic 40.0%
!! CAGTTGATTTGTTGGACTCT+TGG - chr1_1:66942591-66942610 Msa0037770:CDS 40.0%
!! TTGATTTGTTGGACTCTTGG+TGG - chr1_1:66942594-66942613 Msa0037770:CDS 40.0%
TGTTTGGATCACGGCTATTA+CGG - chr1_1:66942638-66942657 Msa0037770:CDS 40.0%
GGCATTAAGGATAAGGAAAG+TGG + chr1_1:66942711-66942730 None:intergenic 40.0%
! AAATGCAGCTAACTGGTTCT+TGG + chr1_1:66942805-66942824 None:intergenic 40.0%
CTGAAAGAAATGCAGCTAAC+TGG + chr1_1:66942812-66942831 None:intergenic 40.0%
TGAAACTTGGGAAGAACTAG+AGG - chr1_1:66942866-66942885 Msa0037770:CDS 40.0%
GAAACTTGGGAAGAACTAGA+GGG - chr1_1:66942867-66942886 Msa0037770:CDS 40.0%
AAACTTGGGAAGAACTAGAG+GGG - chr1_1:66942868-66942887 Msa0037770:CDS 40.0%
CTGTTGTCTGTTTCCCATTA+TGG - chr1_1:66942972-66942991 Msa0037770:CDS 40.0%
GCTGTGACTGAAACCATAAT+GGG + chr1_1:66942988-66943007 None:intergenic 40.0%
TGCTGTGACTGAAACCATAA+TGG + chr1_1:66942989-66943008 None:intergenic 40.0%
CAATCCTGGAACAATATCCT+CGG + chr1_1:66943087-66943106 None:intergenic 40.0%
!!! CAAAAAGCACTGGTTTTGAC+TGG + chr1_1:66943346-66943365 None:intergenic 40.0%
! CAGTCAAAACCAGTGCTTTT+TGG - chr1_1:66943344-66943363 Msa0037770:CDS 40.0%
!! AAAACCAGTGCTTTTTGGAC+TGG - chr1_1:66943349-66943368 Msa0037770:CDS 40.0%
GGGAGTTAGACTCAAAGTAT+GGG - chr1_1:66943534-66943553 Msa0037770:CDS 40.0%
!! GAGAGAGGTGCTAAAATAGT+TGG - chr1_1:66943617-66943636 Msa0037770:CDS 40.0%
! CCGAGTAGTTTGTAGTATAG+TGG + chr1_1:66943666-66943685 None:intergenic 40.0%
GAGATGCATTACTCATGGTT+AGG - chr1_1:66943762-66943781 Msa0037770:CDS 40.0%
TACTCATGGTTAGGAGACAT+AGG - chr1_1:66943771-66943790 Msa0037770:CDS 40.0%
AGTCAGCCTTTGAATTTGTC+AGG - chr1_1:66943843-66943862 Msa0037770:CDS 40.0%
ACATTAGCAACCTCTGAACA+GGG + chr1_1:66943962-66943981 None:intergenic 40.0%
AACATTAGCAACCTCTGAAC+AGG + chr1_1:66943963-66943982 None:intergenic 40.0%
GTTGCTAATGTTATGCTAGC+TGG - chr1_1:66943971-66943990 Msa0037770:CDS 40.0%
! TGTTGTCTACGGGGAAATTT+TGG + chr1_1:66944003-66944022 None:intergenic 40.0%
AAATTTCCCCGTAGACAACA+AGG - chr1_1:66944003-66944022 Msa0037770:CDS 40.0%
! AAGAAACCTTGTTGTCTACG+GGG + chr1_1:66944012-66944031 None:intergenic 40.0%
! GAAGAAACCTTGTTGTCTAC+GGG + chr1_1:66944013-66944032 None:intergenic 40.0%
TAGCAGGGCTTTCTGTAAAA+TGG + chr1_1:66944069-66944088 None:intergenic 40.0%
! ATTTTACAGAAAGCCCTGCT+AGG - chr1_1:66944068-66944087 Msa0037770:CDS 40.0%
! TTTTACAGAAAGCCCTGCTA+GGG - chr1_1:66944069-66944088 Msa0037770:CDS 40.0%
GCATATTAACCACACTTGCT+CGG - chr1_1:66944098-66944117 Msa0037770:CDS 40.0%
! CATGAGACAACTCCTTTTCA+CGG + chr1_1:66944171-66944190 None:intergenic 40.0%
TCAAAGCTTCTTCAGCAGAA+GGG + chr1_1:66944219-66944238 None:intergenic 40.0%
TTCAAAGCTTCTTCAGCAGA+AGG + chr1_1:66944220-66944239 None:intergenic 40.0%
TCTTCCTTTCTTGCAAGAGT+TGG - chr1_1:66944354-66944373 Msa0037770:CDS 40.0%
TGCAATACAACATCGACCTT+AGG - chr1_1:66944398-66944417 Msa0037770:CDS 40.0%
! TTTCGAACCTTTTCAGCCTA+AGG + chr1_1:66944417-66944436 None:intergenic 40.0%
TAGGCTGAAAAGGTTCGAAA+AGG - chr1_1:66944417-66944436 Msa0037770:CDS 40.0%
! TTTTTACTGACCCTGCTAAG+AGG - chr1_1:66944536-66944555 Msa0037770:CDS 40.0%
TAAGAGGATGTCATTCCTTG+AGG - chr1_1:66944552-66944571 Msa0037770:CDS 40.0%
GTCCTGTTTCAATCTGGATA+AGG - chr1_1:66944633-66944652 Msa0037770:CDS 40.0%
! AGCCTTATCCAGATTGAAAC+AGG + chr1_1:66944638-66944657 None:intergenic 40.0%
! CGTGCTATTAATAACTGGAG+TGG - chr1_1:66944670-66944689 Msa0037770:CDS 40.0%
CTTCATCCTTTCCCAGATTA+AGG + chr1_1:66944717-66944736 None:intergenic 40.0%
! ACAGTAATCCAGGGCAATTT+TGG + chr1_1:66944803-66944822 None:intergenic 40.0%
AAAATTGCCCTGGATTACTG+TGG - chr1_1:66944802-66944821 Msa0037770:CDS 40.0%
AACATCTCCACAGTAATCCA+GGG + chr1_1:66944812-66944831 None:intergenic 40.0%
TAACATCTCCACAGTAATCC+AGG + chr1_1:66944813-66944832 None:intergenic 40.0%
TACTGTGGAGATGTTAACTC+TGG - chr1_1:66944817-66944836 Msa0037770:CDS 40.0%
GGACTTAGTTAAGGTTGTGA+AGG - chr1_1:66944909-66944928 Msa0037770:CDS 40.0%
AGGAAGGCTTAGAGAAAGTA+GGG - chr1_1:66944974-66944993 Msa0037770:CDS 40.0%
!! AGAGAAAGTAGGGAAGTACT+TGG - chr1_1:66944984-66945003 Msa0037770:CDS 40.0%
TTGTCGAACAGCTAAGTAAC+GGG + chr1_1:66945010-66945029 None:intergenic 40.0%
ACTTAGCTGTTCGACAAAGA+AGG - chr1_1:66945013-66945032 Msa0037770:CDS 40.0%
TACCTTCACGTTTCTCTGAT+TGG + chr1_1:66945059-66945078 None:intergenic 40.0%
! GAGGCTAGCAGTAATTTTAG+TGG - chr1_1:66945105-66945124 Msa0037770:CDS 40.0%
AAGGAAAATTACGTACCCTG+TGG + chr1_1:66945145-66945164 None:intergenic 40.0%
!! ACCGATTTTCTTTGACTCTG+AGG - chr1_1:66945238-66945257 Msa0037770:intron 40.0%
ACCACTAGGTTGTAACAATG+GGG + chr1_1:66945450-66945469 None:intergenic 40.0%
TAAACAGACACACACAAGGA+GGG + chr1_1:66945532-66945551 None:intergenic 40.0%
ATAAACAGACACACACAAGG+AGG + chr1_1:66945533-66945552 None:intergenic 40.0%
!! GATTTTTCAATCCCGAGGTA+GGG + chr1_1:66945637-66945656 None:intergenic 40.0%
!! TGATTTTTCAATCCCGAGGT+AGG + chr1_1:66945638-66945657 None:intergenic 40.0%
CCCAGGTCAAATAATAAGGA+TGG + chr1_1:66945757-66945776 None:intergenic 40.0%
TCCTTATTATTTGACCTGGG+TGG - chr1_1:66945757-66945776 Msa0037770:intron 40.0%
CAACTCATTTGTGGACACAA+TGG + chr1_1:66945783-66945802 None:intergenic 40.0%
CATTGTGTCCACAAATGAGT+TGG - chr1_1:66945781-66945800 Msa0037770:intron 40.0%
ACATTAGGCCAACTCATTTG+TGG + chr1_1:66945792-66945811 None:intergenic 40.0%
CCTAGGTAAAATTGAACAGG+AGG + chr1_1:66945842-66945861 None:intergenic 40.0%
! CCTCCTGTTCAATTTTACCT+AGG - chr1_1:66945839-66945858 Msa0037770:intron 40.0%
TTGATTTCATCAACAGGACC+AGG - chr1_1:66946031-66946050 Msa0037770:intron 40.0%
AAAAGAGGAAAAATCCGTCC+TGG - chr1_1:66946120-66946139 Msa0037770:intron 40.0%
AAAGAGGAAAAATCCGTCCT+GGG - chr1_1:66946121-66946140 Msa0037770:intron 40.0%
!!! ACTATTTTGCAGTGCTGATG+AGG - chr1_1:66946254-66946273 Msa0037770:intron 40.0%
ACGAGAGCTGAAATCTTTGT+TGG - chr1_1:66946329-66946348 Msa0037770:CDS 40.0%
! TTCCCTTATGATGTTTGGTG+AGG - chr1_1:66946353-66946372 Msa0037770:CDS 40.0%
! TCCCTTATGATGTTTGGTGA+GGG - chr1_1:66946354-66946373 Msa0037770:CDS 40.0%
ACCCTCACCAAACATCATAA+GGG + chr1_1:66946358-66946377 None:intergenic 40.0%
GGATGAAATGCATGATTCAG+AGG - chr1_1:66946521-66946540 Msa0037770:CDS 40.0%
ACATTCATCAATCTGCATGC+AGG + chr1_1:66946639-66946658 None:intergenic 40.0%
GCATGCAGATTGATGAATGT+TGG - chr1_1:66946639-66946658 Msa0037770:CDS 40.0%
! AATGTTGGCCTCTTCATTTG+AGG - chr1_1:66946654-66946673 Msa0037770:CDS 40.0%
! ATGTTGGCCTCTTCATTTGA+GGG - chr1_1:66946655-66946674 Msa0037770:CDS 40.0%
AGTAGCAACAATCAATTCGG+CGG + chr1_1:66946713-66946732 None:intergenic 40.0%
!! TGAAATGAAAGTACTGCCCA+AGG - chr1_1:66946734-66946753 Msa0037770:CDS 40.0%
GAATCGGAAAGTTTCGTCGT+CGG + chr1_1:66940565-66940584 None:intergenic 45.0%
TTGGTGGAAGGAAGAGAGAT+GGG + chr1_1:66940652-66940671 None:intergenic 45.0%
TTTGGTGGAAGGAAGAGAGA+TGG + chr1_1:66940653-66940672 None:intergenic 45.0%
!!! CCAAGCTTGTTTTTGGTGGA+AGG + chr1_1:66940664-66940683 None:intergenic 45.0%
CCTTCCACCAAAAACAAGCT+TGG - chr1_1:66940661-66940680 Msa0037770:three_prime_UTR 45.0%
!! GAGAAAGAAGCGCTTCTACT+TGG - chr1_1:66940771-66940790 Msa0037770:CDS 45.0%
TGTATTTCGCTCAGTCCTGA+TGG - chr1_1:66940876-66940895 Msa0037770:CDS 45.0%
!! CTACAGTGGAGTACTGCTTA+TGG - chr1_1:66941607-66941626 Msa0037770:intron 45.0%
CAACATCCTATATCATGGCG+AGG - chr1_1:66942123-66942142 Msa0037770:intron 45.0%
AGCATTACTTGCCTCTTCAG+AGG - chr1_1:66942227-66942246 Msa0037770:CDS 45.0%
! AGCTTTTGCAGGAGCAGTTT+TGG - chr1_1:66942254-66942273 Msa0037770:CDS 45.0%
!! GCTGCAATTTTAGCACCACT+GGG + chr1_1:66942288-66942307 None:intergenic 45.0%
!! AGCTGCAATTTTAGCACCAC+TGG + chr1_1:66942289-66942308 None:intergenic 45.0%
CTCAAAGAAAACAACGGAGG+GGG + chr1_1:66942340-66942359 None:intergenic 45.0%
! TGCAGTTCTGATCTTCTTGC+TGG - chr1_1:66942435-66942454 Msa0037770:CDS 45.0%
AAGACGAAGTCAGGTTCATG+TGG - chr1_1:66942550-66942569 Msa0037770:CDS 45.0%
TTCTTCTCATGTACGGGGTA+TGG - chr1_1:66942761-66942780 Msa0037770:CDS 45.0%
CACCCTCATTTAGTGAGCTT+TGG + chr1_1:66943022-66943041 None:intergenic 45.0%
ACTTCGAGGCTTCTATTTGC+AGG - chr1_1:66943043-66943062 Msa0037770:CDS 45.0%
TGTTCCGAGGATATTGTTCC+AGG - chr1_1:66943080-66943099 Msa0037770:CDS 45.0%
GATTGCTGACATGTTCAGGT+TGG - chr1_1:66943102-66943121 Msa0037770:CDS 45.0%
TCGAAAATTGTCACTGGTGG+CGG - chr1_1:66943245-66943264 Msa0037770:CDS 45.0%
!! CTTTTTGGACTGGACGAGAT+TGG - chr1_1:66943359-66943378 Msa0037770:CDS 45.0%
ATTGGCAGATTGCATGCTAG+CGG - chr1_1:66943377-66943396 Msa0037770:CDS 45.0%
GGGGAGTTAGACTCAAAGTA+TGG - chr1_1:66943533-66943552 Msa0037770:CDS 45.0%
TCCGCAGTAACAGCAGAAAA+AGG - chr1_1:66943564-66943583 Msa0037770:CDS 45.0%
! CCCTTTTTCTGCTGTTACTG+CGG + chr1_1:66943568-66943587 None:intergenic 45.0%
CCGCAGTAACAGCAGAAAAA+GGG - chr1_1:66943565-66943584 Msa0037770:CDS 45.0%
GTGAAAAAGCTTGCCAACCA+CGG + chr1_1:66943823-66943842 None:intergenic 45.0%
AGCCTTTGAATTTGTCAGGC+AGG - chr1_1:66943847-66943866 Msa0037770:CDS 45.0%
GACCTGCCTGACAAATTCAA+AGG + chr1_1:66943852-66943871 None:intergenic 45.0%
TGTCAGGCAGGTCAACAATT+TGG - chr1_1:66943859-66943878 Msa0037770:CDS 45.0%
GTCAGGCAGGTCAACAATTT+GGG - chr1_1:66943860-66943879 Msa0037770:CDS 45.0%
GCTAATGTTATGCTAGCTGG+AGG - chr1_1:66943974-66943993 Msa0037770:CDS 45.0%
! TGTCTACGGGGAAATTTTGG+AGG + chr1_1:66944000-66944019 None:intergenic 45.0%
ATATGCAAAGCTCCCTAGCA+GGG + chr1_1:66944084-66944103 None:intergenic 45.0%
AATATGCAAAGCTCCCTAGC+AGG + chr1_1:66944085-66944104 None:intergenic 45.0%
TGTCTCATGCTGATGATCAC+AGG - chr1_1:66944182-66944201 Msa0037770:CDS 45.0%
ATCATAGACAGCATCCCCAT+CGG + chr1_1:66944260-66944279 None:intergenic 45.0%
! TGCTGTCTATGATGCTGCTT+TGG - chr1_1:66944267-66944286 Msa0037770:CDS 45.0%
!! GCTGTCTATGATGCTGCTTT+GGG - chr1_1:66944268-66944287 Msa0037770:CDS 45.0%
GGCATTCAATGCCACAATAG+CGG + chr1_1:66944314-66944333 None:intergenic 45.0%
ACATCGACCTTAGGCTGAAA+AGG - chr1_1:66944407-66944426 Msa0037770:CDS 45.0%
CTCAGACATATTGCTTCTGC+CGG - chr1_1:66944442-66944461 Msa0037770:CDS 45.0%
GAGACAAGGGGAAAAGTTGA+GGG + chr1_1:66944510-66944529 None:intergenic 45.0%
AGAGACAAGGGGAAAAGTTG+AGG + chr1_1:66944511-66944530 None:intergenic 45.0%
GGAATGACATCCTCTTAGCA+GGG + chr1_1:66944549-66944568 None:intergenic 45.0%
AGGAATGACATCCTCTTAGC+AGG + chr1_1:66944550-66944569 None:intergenic 45.0%
GATGTCATTCCTTGAGGCAT+GGG - chr1_1:66944558-66944577 Msa0037770:CDS 45.0%
ATGTCATTCCTTGAGGCATG+GGG - chr1_1:66944559-66944578 Msa0037770:CDS 45.0%
GCATGGGGTGATTATCTTAG+CGG - chr1_1:66944574-66944593 Msa0037770:CDS 45.0%
AGTTGCTGGGTTCCTTAATC+TGG - chr1_1:66944702-66944721 Msa0037770:CDS 45.0%
GTTGCTGGGTTCCTTAATCT+GGG - chr1_1:66944703-66944722 Msa0037770:CDS 45.0%
TGGGTTCCTTAATCTGGGAA+AGG - chr1_1:66944708-66944727 Msa0037770:CDS 45.0%
!! GATGAAGTACTGCATCTTGC+CGG - chr1_1:66944730-66944749 Msa0037770:CDS 45.0%
AAGTTCTTCGCAAAGCTCAC+CGG + chr1_1:66944752-66944771 None:intergenic 45.0%
TGCGAAGAACTTCAAGCACT+TGG - chr1_1:66944760-66944779 Msa0037770:CDS 45.0%
AATTTCTGCAAGGGATTGGG+AGG - chr1_1:66944852-66944871 Msa0037770:CDS 45.0%
GAGGAAGGCTTAGAGAAAGT+AGG - chr1_1:66944973-66944992 Msa0037770:CDS 45.0%
CTCCAATCAGAGAAACGTGA+AGG - chr1_1:66945054-66945073 Msa0037770:CDS 45.0%
! TGAAGATGATGCTGCTTCAG+AGG - chr1_1:66945086-66945105 Msa0037770:CDS 45.0%
GAATGAGTGCATACACCACA+GGG - chr1_1:66945127-66945146 Msa0037770:CDS 45.0%
AACAAAACTGAGAGCCACAG+TGG - chr1_1:66945292-66945311 Msa0037770:intron 45.0%
TCCCCATTGTTACAACCTAG+TGG - chr1_1:66945446-66945465 Msa0037770:intron 45.0%
!! AACCTAGTGGTTTGGTTGTG+AGG - chr1_1:66945459-66945478 Msa0037770:intron 45.0%
! GGTTGTGAGGACATTTTGTG+TGG - chr1_1:66945472-66945491 Msa0037770:intron 45.0%
AAACAGACACACACAAGGAG+GGG + chr1_1:66945531-66945550 None:intergenic 45.0%
AAGTTTGACACTCCCTACCT+CGG - chr1_1:66945622-66945641 Msa0037770:intron 45.0%
GCCACCCAGGTCAAATAATA+AGG + chr1_1:66945761-66945780 None:intergenic 45.0%
! AGAAGCAGCAGAACTTTTCC+TGG + chr1_1:66946052-66946071 None:intergenic 45.0%
TCTTTCAGCTGCAACTACCA+GGG - chr1_1:66946074-66946093 Msa0037770:intron 45.0%
! AAATGAAGGTGCACAGAGCA+GGG + chr1_1:66946184-66946203 None:intergenic 45.0%
! AAAATGAAGGTGCACAGAGC+AGG + chr1_1:66946185-66946204 None:intergenic 45.0%
! GCGTTGGTGGATCATTTGAA+AGG - chr1_1:66946282-66946301 Msa0037770:intron 45.0%
! GAAAGGCATGTCTATGAGAG+TGG - chr1_1:66946299-66946318 Msa0037770:intron 45.0%
CACCCTCACCAAACATCATA+AGG + chr1_1:66946359-66946378 None:intergenic 45.0%
TGCAAGGAAGCTACAGCAAA+TGG - chr1_1:66946383-66946402 Msa0037770:CDS 45.0%
GCAAGGAAGCTACAGCAAAT+GGG - chr1_1:66946384-66946403 Msa0037770:CDS 45.0%
CAAGGAAGCTACAGCAAATG+GGG - chr1_1:66946385-66946404 Msa0037770:CDS 45.0%
AAGGAAGCTACAGCAAATGG+GGG - chr1_1:66946386-66946405 Msa0037770:CDS 45.0%
! ATGATTCAGAGGCTTTGTCG+TGG - chr1_1:66946532-66946551 Msa0037770:CDS 45.0%
! TGTTGGCCTCTTCATTTGAG+GGG - chr1_1:66946656-66946675 Msa0037770:CDS 45.0%
TTCGAACCCCTCAAATGAAG+AGG + chr1_1:66946665-66946684 None:intergenic 45.0%
ACCCTAATGTCACTCTCCTT+GGG + chr1_1:66946753-66946772 None:intergenic 45.0%
AACCCTAATGTCACTCTCCT+TGG + chr1_1:66946754-66946773 None:intergenic 45.0%
! CGATGTCTAAGGCGGAGAAT+CGG + chr1_1:66940581-66940600 None:intergenic 50.0%
GTTGCGTTCGATGTCTAAGG+CGG + chr1_1:66940589-66940608 None:intergenic 50.0%
ACGGTTGCGTTCGATGTCTA+AGG + chr1_1:66940592-66940611 None:intergenic 50.0%
GGGAAGAGAGGAAGAAGAGA+CGG + chr1_1:66940611-66940630 None:intergenic 50.0%
! GCGAACGTGACTCAAGTTGT+TGG - chr1_1:66940831-66940850 Msa0037770:CDS 50.0%
CCATCTCCTCGCCATGATAT+AGG + chr1_1:66942132-66942151 None:intergenic 50.0%
CCTATATCATGGCGAGGAGA+TGG - chr1_1:66942129-66942148 Msa0037770:intron 50.0%
!!! TTGCAGGAGCAGTTTTGGAG+TGG - chr1_1:66942259-66942278 Msa0037770:CDS 50.0%
! TTGTTGGACTCTTGGTGGTC+AGG - chr1_1:66942599-66942618 Msa0037770:CDS 50.0%
TCCGTTGCACTAGTCATCGA+TGG - chr1_1:66942666-66942685 Msa0037770:CDS 50.0%
GCCATCGATGACTAGTGCAA+CGG + chr1_1:66942670-66942689 None:intergenic 50.0%
AGGAGGCGGCATTAAGGATA+AGG + chr1_1:66942718-66942737 None:intergenic 50.0%
GTACATAGGAGGCGGCATTA+AGG + chr1_1:66942724-66942743 None:intergenic 50.0%
! CTAAATGAGGGTGCACTTCG+AGG - chr1_1:66943029-66943048 Msa0037770:CDS 50.0%
CCTGAACATGTCAGCAATCC+TGG + chr1_1:66943101-66943120 None:intergenic 50.0%
CCAGGATTGCTGACATGTTC+AGG - chr1_1:66943098-66943117 Msa0037770:CDS 50.0%
CCAACGCTACATCCATCCAA+GGG + chr1_1:66943310-66943329 None:intergenic 50.0%
ACCAACGCTACATCCATCCA+AGG + chr1_1:66943311-66943330 None:intergenic 50.0%
!! TGGATGGATGTAGCGTTGGT+CGG - chr1_1:66943311-66943330 Msa0037770:CDS 50.0%
! TCGTCCAGTCCAAAAAGCAC+TGG + chr1_1:66943356-66943375 None:intergenic 50.0%
TTGGCAGATTGCATGCTAGC+GGG - chr1_1:66943378-66943397 Msa0037770:CDS 50.0%
AGCAACCTCTGAACAGGGAA+CGG + chr1_1:66943957-66943976 None:intergenic 50.0%
AGCTTCTTCAGCAGAAGGGT+AGG + chr1_1:66944215-66944234 None:intergenic 50.0%
! ATCTGTTGTGGTTGGCCGAT+GGG - chr1_1:66944242-66944261 Msa0037770:CDS 50.0%
CGCTCCAACTCTTGCAAGAA+AGG + chr1_1:66944361-66944380 None:intergenic 50.0%
GGATGTCATTCCTTGAGGCA+TGG - chr1_1:66944557-66944576 Msa0037770:CDS 50.0%
GATAATCACCCCATGCCTCA+AGG + chr1_1:66944570-66944589 None:intergenic 50.0%
CTTCAAGCACTTGGTAAGCC+TGG - chr1_1:66944769-66944788 Msa0037770:CDS 50.0%
!! GCAATTTTGGCAGCTTCACC+AGG + chr1_1:66944790-66944809 None:intergenic 50.0%
TGAAGCTGCCAAAATTGCCC+TGG - chr1_1:66944792-66944811 Msa0037770:CDS 50.0%
GGAATGAGTGCATACACCAC+AGG - chr1_1:66945126-66945145 Msa0037770:CDS 50.0%
! TTGACTCTGAGGATGGACTC+CGG - chr1_1:66945249-66945268 Msa0037770:intron 50.0%
GTCCTCACAACCAAACCACT+AGG + chr1_1:66945464-66945483 None:intergenic 50.0%
GTGAACTGGGTTCGAACTCA+GGG + chr1_1:66945500-66945519 None:intergenic 50.0%
AACAGACACACACAAGGAGG+GGG + chr1_1:66945530-66945549 None:intergenic 50.0%
AGTTTGACACTCCCTACCTC+GGG - chr1_1:66945623-66945642 Msa0037770:intron 50.0%
CTCTTTCAGCTGCAACTACC+AGG - chr1_1:66946073-66946092 Msa0037770:intron 50.0%
TGCTGATGAGGAGTTTGCGT+TGG - chr1_1:66946266-66946285 Msa0037770:intron 50.0%
TGATGAGGAGTTTGCGTTGG+TGG - chr1_1:66946269-66946288 Msa0037770:intron 50.0%
TTGGTGAGGGTGAAACTGCA+AGG - chr1_1:66946367-66946386 Msa0037770:CDS 50.0%
! ATTCAGAGGCTTTGTCGTGG+CGG - chr1_1:66946535-66946554 Msa0037770:CDS 50.0%
TGCCCAAGGAGAGTGACATT+AGG - chr1_1:66946748-66946767 Msa0037770:CDS 50.0%
GCCCAAGGAGAGTGACATTA+GGG - chr1_1:66946749-66946768 Msa0037770:CDS 50.0%
CTCCTCCGGAAGTGAAACCA+AGG - chr1_1:66941335-66941354 Msa0037770:intron 55.0%
CACCTTGGTTTCACTTCCGG+AGG + chr1_1:66941340-66941359 None:intergenic 55.0%
!!! GTTTTGGAGTGGATGCCCAG+TGG - chr1_1:66942270-66942289 Msa0037770:CDS 55.0%
!! TGTCACTGGTGGCGGATCTT+TGG - chr1_1:66943253-66943272 Msa0037770:CDS 55.0%
! GTTTTTCTGCAGCCTGCCCT+TGG - chr1_1:66943291-66943310 Msa0037770:CDS 55.0%
CCCTTGGATGGATGTAGCGT+TGG - chr1_1:66943307-66943326 Msa0037770:CDS 55.0%
TGGCAGATTGCATGCTAGCG+GGG - chr1_1:66943379-66943398 Msa0037770:CDS 55.0%
TGTGTCCGTTCCCTGTTCAG+AGG - chr1_1:66943949-66943968 Msa0037770:CDS 55.0%
! CATCTGTTGTGGTTGGCCGA+TGG - chr1_1:66944241-66944260 Msa0037770:CDS 55.0%
! TCTGTTGTGGTTGGCCGATG+GGG - chr1_1:66944243-66944262 Msa0037770:CDS 55.0%
! AGTGGGGTGCTTACAGTTGC+TGG - chr1_1:66944688-66944707 Msa0037770:CDS 55.0%
! GTGGGGTGCTTACAGTTGCT+GGG - chr1_1:66944689-66944708 Msa0037770:CDS 55.0%
TTCTGCAAGGGATTGGGAGG+AGG - chr1_1:66944855-66944874 Msa0037770:CDS 55.0%
GGATTGGGAGGAGGCTATGA+GGG - chr1_1:66944864-66944883 Msa0037770:CDS 55.0%
GGTGAACTGGGTTCGAACTC+AGG + chr1_1:66945501-66945520 None:intergenic 55.0%
AGGGGGGAATGTGGTGAACT+GGG + chr1_1:66945513-66945532 None:intergenic 55.0%
ACAGACACACACAAGGAGGG+GGG + chr1_1:66945529-66945548 None:intergenic 55.0%
GTAGCATCTGCTGCCTTTGC+AGG - chr1_1:66945689-66945708 Msa0037770:intron 55.0%
CTACCAGGGCAAGAGATGCT+AGG - chr1_1:66946088-66946107 Msa0037770:intron 55.0%
CAAGAGATGCTAGGCGTCAG+AGG - chr1_1:66946097-66946116 Msa0037770:intron 55.0%
GCTAGGCGTCAGAGGAAAAG+AGG - chr1_1:66946105-66946124 Msa0037770:intron 55.0%
GAGGAAAAATCCGTCCTGGG+AGG - chr1_1:66946124-66946143 Msa0037770:intron 55.0%
GGTCAAGATACCTCCCAGGA+CGG + chr1_1:66946137-66946156 None:intergenic 55.0%
CTCAGGTCAAGATACCTCCC+AGG + chr1_1:66946141-66946160 None:intergenic 55.0%
! GGCAGCAGTCAGATTAGCTG+AGG - chr1_1:66946431-66946450 Msa0037770:CDS 55.0%
! TTCAGAGGCTTTGTCGTGGC+GGG - chr1_1:66946536-66946555 Msa0037770:CDS 55.0%
TTCTGCAGCCTGCCCTTGGA+TGG - chr1_1:66943295-66943314 Msa0037770:CDS 60.0%
CGCTACATCCATCCAAGGGC+AGG + chr1_1:66943306-66943325 None:intergenic 60.0%
!! GTAGCGTTGGTCGGAAGTGC+TGG - chr1_1:66943320-66943339 Msa0037770:CDS 60.0%
GGCAGATTGCATGCTAGCGG+GGG - chr1_1:66943380-66943399 Msa0037770:CDS 60.0%
GCAGATTGCATGCTAGCGGG+GGG - chr1_1:66943381-66943400 Msa0037770:CDS 60.0%
AGGCTCACTCCGAGCAAGTG+TGG + chr1_1:66944110-66944129 None:intergenic 60.0%
GGGATTGGGAGGAGGCTATG+AGG - chr1_1:66944863-66944882 Msa0037770:CDS 60.0%
GAGGGGGGAATGTGGTGAAC+TGG + chr1_1:66945514-66945533 None:intergenic 60.0%
CACACAAGGAGGGGGGAATG+TGG + chr1_1:66945522-66945541 None:intergenic 60.0%
CTGCCTTTGCAGGCAGAGCT+CGG - chr1_1:66945699-66945718 Msa0037770:intron 60.0%
TGTGGACACAATGGCCACCC+AGG + chr1_1:66945774-66945793 None:intergenic 60.0%
ACGCCTAGCATCTCTTGCCC+TGG + chr1_1:66946094-66946113 None:intergenic 60.0%
AGAGCTCGGCCGTCCAAGTC+TGG - chr1_1:66945713-66945732 Msa0037770:intron 65.0%
CGGCCGAGCTCTGCCTGCAA+AGG + chr1_1:66945705-66945724 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 66940488 66946844 66940488 ID=Msa0037770;Name=Msa0037770
chr1_1 mRNA 66940488 66946844 66940488 ID=Msa0037770-mRNA-1;Parent=Msa0037770;Name=Msa0037770-mRNA-1;_AED=0.02;_eAED=0.02;_QI=22|1|1|1|1|1|4|260|1322
chr1_1 exon 66940488 66941066 66940488 ID=Msa0037770-mRNA-1:exon:21676;Parent=Msa0037770-mRNA-1
chr1_1 exon 66941187 66941285 66941187 ID=Msa0037770-mRNA-1:exon:21675;Parent=Msa0037770-mRNA-1
chr1_1 exon 66942184 66945229 66942184 ID=Msa0037770-mRNA-1:exon:21674;Parent=Msa0037770-mRNA-1
chr1_1 exon 66946318 66946844 66946318 ID=Msa0037770-mRNA-1:exon:21673;Parent=Msa0037770-mRNA-1
chr1_1 five_prime_UTR 66946823 66946844 66946823 ID=Msa0037770-mRNA-1:five_prime_utr;Parent=Msa0037770-mRNA-1
chr1_1 CDS 66946318 66946822 66946318 ID=Msa0037770-mRNA-1:cds;Parent=Msa0037770-mRNA-1
chr1_1 CDS 66942184 66945229 66942184 ID=Msa0037770-mRNA-1:cds;Parent=Msa0037770-mRNA-1
chr1_1 CDS 66941187 66941285 66941187 ID=Msa0037770-mRNA-1:cds;Parent=Msa0037770-mRNA-1
chr1_1 CDS 66940748 66941066 66940748 ID=Msa0037770-mRNA-1:cds;Parent=Msa0037770-mRNA-1
chr1_1 three_prime_UTR 66940488 66940747 66940488 ID=Msa0037770-mRNA-1:three_prime_utr;Parent=Msa0037770-mRNA-1
Gene Sequence

>Msa0037770

ATGAAAAACCTAAAACTCTTCCGTGAAGTTCCTTTACTTCTCCGATTAAACTCCGACGACGAAACTTTCCGATTCTCCGCCTTAGACATCGAACGCAACCGTCTCTTCTTCCTCTCTTCCCACAATTTCATCTACACTTCCCATCTCTCTTCCTTCCACCAAAAACAAGCTTGGAGTAACAACAACTCATCATTATCAACTACTCATGCCATCGTTGATCTTGAACCTGATGATACCGTTACTTCCTTCGATTATCTCATGGAGAAAGAAGCGCTTCTACTTGGAACTTCGAACGGGCTTTTGTTGCTATTTGATGTTGATGCGAACGTGACTCAAGTTGTTGGTAATGTTGATGGTGGTGTTAATTGTATTTCGCTCAGTCCTGATGGTGAAGTTATTGCTGTAGTTACTGGTTTTGGTCAGGTTTTGGTCATGACTCATGATTGGGATTTGCTGTATGAAATATCACTCTTCGATGACAATGATGATGAAGGTCATCACGTAAATGGAGAAAACTTTATGGAGCAACATCCTATATCATGGCGAGGAGATGGAAAATACTTTGCTACGATGAGTATGTGTGGTTCTAATTTATCACGGAAACTTAAGATTTGGGAACGAGATTCAGGAGCATTACTTGCCTCTTCAGAGGAAAAAGCTTTTGCAGGAGCAGTTTTGGAGTGGATGCCCAGTGGTGCTAAAATTGCAGCTGTATATGATAGAAAAGCTGAAAATGAATCCCCCTCCGTTGTTTTCTTTGAGAGAAATGGATTAGAAAGAAGCAAATTTAGTGTTGGTGAAGGAATTAATGCGAAAGTAAGATTTCTGAAGTGGAATTGCAGTTCTGATCTTCTTGCTGGTGTTGTTGAATGTGAAAATTATGAGGCTCTAAAGATATGGTATTTTAGCAACAATCATTGGTACCTGAAGCATGAAATTAGATACTTAAAGCAAGACGAAGTCAGGTTCATGTGGAATCAAGAAAAACCTTTGCAGTTGATTTGTTGGACTCTTGGTGGTCAGGTTACAGTTTACAATTTTGTTTGGATCACGGCTATTACGGACAATTCCGTTGCACTAGTCATCGATGGCTCCAATATTCATGTAACACCACTTTCCTTATCCTTAATGCCGCCTCCTATGTACTTATTTAGCCTAACATTTTCTTCTCATGTACGGGGTATGGCAGTATACTGTAAAAACTCCAAGAACCAGTTAGCTGCATTTCTTTCAGATGGTAGTTTATGTGTTGTAGAGCTTCCATCAATTGAAACTTGGGAAGAACTAGAGGGGCAAGAATTCAGTGTTGAAGCCTCTCATACTGAAACAGTGTTTGGATCCACATTACATCTTGTATGGTTAGATTCACATACGCTGTTGTCTGTTTCCCATTATGGTTTCAGTCACAGCAATGACTTATTCCAAAGCTCACTAAATGAGGGTGCACTTCGAGGCTTCTATTTGCAGGAAATAGAATTGGAATGTTCCGAGGATATTGTTCCAGGATTGCTGACATGTTCAGGTTGGAATGCAACAGTTTCTAAGCAAAATACACTTGAAGAGCTTGTTATTGGCATTGCTCCAAATCCTGCCAGTAAATATTCTGCATATATGCAGTTTTCTGATGGGAAAATCAACGAGTATTTATCGAAAATTGTCACTGGTGGCGGATCTTTGGAACAAGAATATCAAGGTTTTTCTGCAGCCTGCCCTTGGATGGATGTAGCGTTGGTCGGAAGTGCTGGCCAGTCAAAACCAGTGCTTTTTGGACTGGACGAGATTGGCAGATTGCATGCTAGCGGGGGGATAGTAGTTTGCAACAACTGCAGCAGTTTCTCATTTTACTCGAATTTGGCAGATCAAGTTGTGACACATCTAATTCTTGCAACTAAACAAGATCTGCTTTTTATTGTTGACATTGTCGATATATTTAATGGGGAGTTAGACTCAAAGTATGGGAATTTTGTCCGCAGTAACAGCAGAAAAAGGGAAGAAAATGAAAATTACATACATATATGGGAGAGAGGTGCTAAAATAGTTGGAGTTTTACATGGAGACGAAGCTGCCACTATACTACAAACTACTCGGGGAAACCTAGAATGTATATACCCTAGAAAATTGGTTTTGGTTTCTATCATTAATGCCTTAGTTCAAAAGCGATTTAGAGATGCATTACTCATGGTTAGGAGACATAGGATAGATTTCAATGTAATTGTTGATTACCGTGGTTGGCAAGCTTTTTCACAGTCAGCCTTTGAATTTGTCAGGCAGGTCAACAATTTGGGTTACATAACTGAGTTTGTTTGTTCTGTAAAGAATGAAAATGTTATAGAGACACTCTACAAAAATCATGTGTCCGTTCCCTGTTCAGAGGTTGCTAATGTTATGCTAGCTGGAGGCCTCCAAAATTTCCCCGTAGACAACAAGGTTTCTTCAATTCTGATGGCCATAAGAAAAGCACTTGAAGACCATTTTACAGAAAGCCCTGCTAGGGAGCTTTGCATATTAACCACACTTGCTCGGAGTGAGCCTCCATTACTTGAAGATGCTTTAAAGAGAATAAAAGTTATCCGTGAAAAGGAGTTGTCTCATGCTGATGATCACAGGAGAATGACCTACCCTTCTGCTGAAGAAGCTTTGAAACATCTGTTGTGGTTGGCCGATGGGGATGCTGTCTATGATGCTGCTTTGGGTCTTTATGATTTAAAACTCACCGCTATTGTGGCATTGAATGCCCAAAAAGATCCAAAAGAATTTCTTCCTTTCTTGCAAGAGTTGGAGCGTATGCCTACACCATTAATGCAATACAACATCGACCTTAGGCTGAAAAGGTTCGAAAAGGCTCTCAGACATATTGCTTCTGCCGGCGATTCTCATTATGATGATTGTATGACACTGGTGAAGAAAAACCCTCAACTTTTCCCCTTGTCTCTTCAACTTTTTACTGACCCTGCTAAGAGGATGTCATTCCTTGAGGCATGGGGTGATTATCTTAGCGGTGAAAAATGCTTTGAAGATGCTGCAACAATTTACTTGTCCTGTTTCAATCTGGATAAGGCTCTTAAGTCTTATCGTGCTATTAATAACTGGAGTGGGGTGCTTACAGTTGCTGGGTTCCTTAATCTGGGAAAGGATGAAGTACTGCATCTTGCCGGTGAGCTTTGCGAAGAACTTCAAGCACTTGGTAAGCCTGGTGAAGCTGCCAAAATTGCCCTGGATTACTGTGGAGATGTTAACTCTGGTGTAAATTTATTAATTTCTGCAAGGGATTGGGAGGAGGCTATGAGGGTTGTTTTTATGCATAGAAGAGAGGACTTAGTTAAGGTTGTGAAGGATGCATCTGTTGAATGTGCAAGCACACTTACCAATGAATATGAGGAAGGCTTAGAGAAAGTAGGGAAGTACTTGGCCCGTTACTTAGCTGTTCGACAAAGAAGGCTACTTCTCGCAGCAAAGCTCCAATCAGAGAAACGTGAAGGTAGTGATGTTGAAGATGATGCTGCTTCAGAGGCTAGCAGTAATTTTAGTGGAATGAGTGCATACACCACAGGGACCAGGAAAAGTTCTGCTGCTTCTACTCTTTCAGCTGCAACTACCAGGGCAAGAGATGCTAGGCGTCAGAGGAAAAGAGGAAAAATCCGTCCTGGGAGTGCTGATGAGGAGTTTGCGTTGGTGGATCATTTGAAAGGCATGTCTATGAGAGTGGAAGCAAGACGAGAGCTGAAATCTTTGTTGGTTTCCCTTATGATGTTTGGTGAGGGTGAAACTGCAAGGAAGCTACAGCAAATGGGGGAAAACTTTCAATTGTCTCAGATGGCAGCAGTCAGATTAGCTGAGGATACAATATCAAATGATACCATAAACGAGTATGCACATACTTTGGAGCAATATACCCGAAAAGTAAGGGATGAAATGCATGATTCAGAGGCTTTGTCGTGGCGGGTCAAAGTTTTTTTAAGCAACGAGTGA
Protein sequence

>Msa0037770

MKNLKLFREVPLLLRLNSDDETFRFSALDIERNRLFFLSSHNFIYTSHLSSFHQKQAWSNNNSSLSTTHAIVDLEPDDTVTSFDYLMEKEALLLGTSNGLLLLFDVDANVTQVVGNVDGGVNCISLSPDGEVIAVVTGFGQVLVMTHDWDLLYEISLFDDNDDEGHHVNGENFMEQHPISWRGDGKYFATMSMCGSNLSRKLKIWERDSGALLASSEEKAFAGAVLEWMPSGAKIAAVYDRKAENESPSVVFFERNGLERSKFSVGEGINAKVRFLKWNCSSDLLAGVVECENYEALKIWYFSNNHWYLKHEIRYLKQDEVRFMWNQEKPLQLICWTLGGQVTVYNFVWITAITDNSVALVIDGSNIHVTPLSLSLMPPPMYLFSLTFSSHVRGMAVYCKNSKNQLAAFLSDGSLCVVELPSIETWEELEGQEFSVEASHTETVFGSTLHLVWLDSHTLLSVSHYGFSHSNDLFQSSLNEGALRGFYLQEIELECSEDIVPGLLTCSGWNATVSKQNTLEELVIGIAPNPASKYSAYMQFSDGKINEYLSKIVTGGGSLEQEYQGFSAACPWMDVALVGSAGQSKPVLFGLDEIGRLHASGGIVVCNNCSSFSFYSNLADQVVTHLILATKQDLLFIVDIVDIFNGELDSKYGNFVRSNSRKREENENYIHIWERGAKIVGVLHGDEAATILQTTRGNLECIYPRKLVLVSIINALVQKRFRDALLMVRRHRIDFNVIVDYRGWQAFSQSAFEFVRQVNNLGYITEFVCSVKNENVIETLYKNHVSVPCSEVANVMLAGGLQNFPVDNKVSSILMAIRKALEDHFTESPARELCILTTLARSEPPLLEDALKRIKVIREKELSHADDHRRMTYPSAEEALKHLLWLADGDAVYDAALGLYDLKLTAIVALNAQKDPKEFLPFLQELERMPTPLMQYNIDLRLKRFEKALRHIASAGDSHYDDCMTLVKKNPQLFPLSLQLFTDPAKRMSFLEAWGDYLSGEKCFEDAATIYLSCFNLDKALKSYRAINNWSGVLTVAGFLNLGKDEVLHLAGELCEELQALGKPGEAAKIALDYCGDVNSGVNLLISARDWEEAMRVVFMHRREDLVKVVKDASVECASTLTNEYEEGLEKVGKYLARYLAVRQRRLLLAAKLQSEKREGSDVEDDAASEASSNFSGMSAYTTGTRKSSAASTLSAATTRARDARRQRKRGKIRPGSADEEFALVDHLKGMSMRVEARRELKSLLVSLMMFGEGETARKLQQMGENFQLSQMAAVRLAEDTISNDTINEYAHTLEQYTRKVRDEMHDSEALSWRVKVFLSNE*