Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061390 | XP_013448931.1 | 90.598 | 117 | 10 | 1 | 4 | 120 | 5 | 120 | 6.47e-70 | 215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061390 | sp|O81208|OHP1_ARATH | 73.750 | 80 | 21 | 0 | 41 | 120 | 31 | 110 | 2.53e-36 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061390 | A0A072U1E0 | 90.598 | 117 | 10 | 1 | 4 | 120 | 5 | 120 | 3.09e-70 | 215 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0088670 | Msa1061390 | 0.828273 | 9.855534e-55 | -8.615850e-47 |
| Msa0655150 | Msa1061390 | 0.806559 | 7.755868e-50 | -8.615850e-47 |
| Msa0705710 | Msa1061390 | 0.800291 | 1.544269e-48 | -8.615850e-47 |
| Msa0717540 | Msa1061390 | 0.803845 | 2.870068e-49 | -8.615850e-47 |
| Msa0729120 | Msa1061390 | 0.818148 | 2.280540e-52 | -8.615850e-47 |
| Msa0206040 | Msa1061390 | 0.826580 | 2.509631e-54 | -8.615850e-47 |
| Msa0463030 | Msa1061390 | 0.800983 | 1.115447e-48 | -8.615850e-47 |
| Msa1016580 | Msa1061390 | 0.800858 | 1.183374e-48 | -8.615850e-47 |
| Msa1061390 | Msa1112210 | 0.804264 | 2.347790e-49 | -8.615850e-47 |
| Msa1061390 | Msa1422150 | 0.805241 | 1.467749e-49 | -8.615850e-47 |
| Msa1061390 | Msa1452860 | 0.802861 | 4.588229e-49 | -8.615850e-47 |
| Msa0329050 | Msa1061390 | 0.814680 | 1.361721e-51 | -8.615850e-47 |
| Msa0539570 | Msa1061390 | 0.844179 | 8.874476e-59 | -8.615850e-47 |
| Msa0561750 | Msa1061390 | 0.803133 | 4.032154e-49 | -8.615850e-47 |
| Msa0561760 | Msa1061390 | 0.804782 | 1.831107e-49 | -8.615850e-47 |
| Msa0568260 | Msa1061390 | 0.806832 | 6.790627e-50 | -8.615850e-47 |
| Msa0866310 | Msa1061390 | 0.819238 | 1.289697e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061390 | MtrunA17_Chr7g0239341 | 90.598 | 117 | 10 | 1 | 4 | 120 | 5 | 120 | 5.95e-74 | 215 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061390 | AT5G02120.1 | 73.750 | 80 | 21 | 0 | 41 | 120 | 31 | 110 | 2.57e-37 | 122 |
Find 40 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGAATGATGATGGTAATT+TGG | 0.273708 | 7_2:+50822928 | None:intergenic |
| CAATTCAAACCACCATTTCT+TGG | 0.278181 | 7_2:-50822626 | Msa1061390:CDS |
| TTACCATCATCATTCATCTT+AGG | 0.293810 | 7_2:-50822923 | Msa1061390:CDS |
| TTGAATTGAGGCTGTACTTT+TGG | 0.301777 | 7_2:+50822641 | None:intergenic |
| AGATAATGATAAAGTATAAA+AGG | 0.310440 | 7_2:+50820997 | None:intergenic |
| ACATAGCTAAGAACACATTT+TGG | 0.322474 | 7_2:+50821020 | None:intergenic |
| TTACAAAGACAGCAGAAATA+TGG | 0.335532 | 7_2:-50822601 | Msa1061390:CDS |
| AATTCTAGAGCTTGCATGAT+TGG | 0.358544 | 7_2:-50822578 | Msa1061390:CDS |
| CTCTTCCTGTGAGGTGCTGC+TGG | 0.363766 | 7_2:+50822836 | None:intergenic |
| TTTGAAGAAACAAAAGTTGA+TGG | 0.364124 | 7_2:+50822876 | None:intergenic |
| GAGGTGATTGGACTTGAAAT+TGG | 0.366463 | 7_2:-50821279 | Msa1061390:CDS |
| CCTGTGAGGTGCTGCTGGTC+TGG | 0.366596 | 7_2:+50822841 | None:intergenic |
| AATTCAAACCACCATTTCTT+GGG | 0.400252 | 7_2:-50822625 | Msa1061390:CDS |
| GCTTGCATGATTGGACTCAT+TGG | 0.438899 | 7_2:-50822569 | Msa1061390:CDS |
| ATTGGACTTGAAATTGGAAA+AGG | 0.466493 | 7_2:-50821273 | Msa1061390:CDS |
| AAGGGTATACTTGAGGTGAT+TGG | 0.479847 | 7_2:-50821291 | Msa1061390:CDS |
| TGTGGTTTGGAAGATGGGGT+TGG | 0.484587 | 7_2:+50823058 | None:intergenic |
| CTGCTGGTCTGGTCAAGGAA+TGG | 0.489311 | 7_2:+50822852 | None:intergenic |
| GTCTTTGTAAACCCAAGAAA+TGG | 0.513145 | 7_2:+50822614 | None:intergenic |
| AGGTGCTGCTGGTCTGGTCA+AGG | 0.524621 | 7_2:+50822847 | None:intergenic |
| TTTGGCTACATCAACTTCTG+TGG | 0.527164 | 7_2:-50821139 | Msa1061390:three_prime_UTR |
| AGAAATGGTGGTTTGAATTG+AGG | 0.538030 | 7_2:+50822629 | None:intergenic |
| ATGATCAAAGAGGAATATCA+AGG | 0.554694 | 7_2:+50821250 | None:intergenic |
| AATGCAGTAAAACCTCCTTC+TGG | 0.562680 | 7_2:-50822797 | Msa1061390:CDS |
| ATGAAATTGAATGATCAAAG+AGG | 0.565873 | 7_2:+50821240 | None:intergenic |
| GTTCCTAAGATGAATGATGA+TGG | 0.568966 | 7_2:+50822920 | None:intergenic |
| TTTGTGTGGTTTGGAAGATG+GGG | 0.570920 | 7_2:+50823054 | None:intergenic |
| TTTGTAAACCCAAGAAATGG+TGG | 0.572116 | 7_2:+50822617 | None:intergenic |
| TTTGGTTGATGAGGTAGCCA+TGG | 0.573745 | 7_2:+50822946 | None:intergenic |
| GATGAAATGCATACACCAGA+AGG | 0.573827 | 7_2:+50822782 | None:intergenic |
| CCAGACCAGCAGCACCTCAC+AGG | 0.589020 | 7_2:-50822841 | Msa1061390:CDS |
| GTTTGTAGAGTGAAGTGAAG+GGG | 0.621170 | 7_2:+50822898 | None:intergenic |
| GCAGTTATCAACCATTGCCA+TGG | 0.621824 | 7_2:-50822963 | Msa1061390:exon |
| AATCAACAAGGGTATACTTG+AGG | 0.628186 | 7_2:-50821298 | Msa1061390:CDS |
| TGATGGTAATTTGGTTGATG+AGG | 0.628797 | 7_2:+50822937 | None:intergenic |
| TGGTTTGTAGAGTGAAGTGA+AGG | 0.633356 | 7_2:+50822896 | None:intergenic |
| TGATGAGGTAGCCATGGCAA+TGG | 0.664851 | 7_2:+50822952 | None:intergenic |
| GAAATGCATACACCAGAAGG+AGG | 0.693788 | 7_2:+50822785 | None:intergenic |
| AAGGAAACTCTCTTCCTGTG+AGG | 0.718755 | 7_2:+50822827 | None:intergenic |
| GGTTTGTAGAGTGAAGTGAA+GGG | 0.731952 | 7_2:+50822897 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAGTTTTTGAATTATTT+GGG | - | chr7_2:50821339-50821358 | Msa1061390:intron | 10.0% |
| !!! | ATTAAGTTTTTGAATTATTT+GGG | - | chr7_2:50821339-50821358 | Msa1061390:intron | 10.0% |
| !!! | GATTAAGTTTTTGAATTATT+TGG | - | chr7_2:50821338-50821357 | Msa1061390:intron | 15.0% |
| !!! | TTGTTATTTTACTTTGAAAT+GGG | - | chr7_2:50822551-50822570 | Msa1061390:CDS | 15.0% |
| !!! | TCAATTTTAACTTCTTAAAA+TGG | - | chr7_2:50822843-50822862 | Msa1061390:CDS | 15.0% |
| !! | AGATAATGATAAAGTATAAA+AGG | + | chr7_2:50823034-50823053 | None:intergenic | 15.0% |
| !!! | GATTAAGTTTTTGAATTATT+TGG | - | chr7_2:50821338-50821357 | Msa1061390:intron | 15.0% |
| !!! | TTGTTATTTTACTTTGAAAT+GGG | - | chr7_2:50822551-50822570 | Msa1061390:CDS | 15.0% |
| !!! | TCAATTTTAACTTCTTAAAA+TGG | - | chr7_2:50822843-50822862 | Msa1061390:CDS | 15.0% |
| !! | AGATAATGATAAAGTATAAA+AGG | + | chr7_2:50823034-50823053 | None:intergenic | 15.0% |
| !! | TTGCTTTCATATATATCATT+TGG | - | chr7_2:50821540-50821559 | Msa1061390:intron | 20.0% |
| !! | TGCTTTCATATATATCATTT+GGG | - | chr7_2:50821541-50821560 | Msa1061390:intron | 20.0% |
| !!! | ATTCATTAAACTGTGTTATT+GGG | + | chr7_2:50822491-50822510 | None:intergenic | 20.0% |
| !! | TATTCATTAAACTGTGTTAT+TGG | + | chr7_2:50822492-50822511 | None:intergenic | 20.0% |
| !!! | CTTCTAACATCTTAAAATTT+TGG | - | chr7_2:50822523-50822542 | Msa1061390:intron | 20.0% |
| !!! | GTTGTTATTTTACTTTGAAA+TGG | - | chr7_2:50822550-50822569 | Msa1061390:CDS | 20.0% |
| !!! | AATGAAATTTGATTTATGAG+AGG | - | chr7_2:50822615-50822634 | Msa1061390:CDS | 20.0% |
| !! | AGAATAATGTTTATGCTTAA+AGG | + | chr7_2:50822668-50822687 | None:intergenic | 20.0% |
| !! | AATCACAAAATAACTTAACT+AGG | + | chr7_2:50822692-50822711 | None:intergenic | 20.0% |
| !! | TTGCTTTCATATATATCATT+TGG | - | chr7_2:50821540-50821559 | Msa1061390:intron | 20.0% |
| !! | TGCTTTCATATATATCATTT+GGG | - | chr7_2:50821541-50821560 | Msa1061390:intron | 20.0% |
| !!! | ATTCATTAAACTGTGTTATT+GGG | + | chr7_2:50822491-50822510 | None:intergenic | 20.0% |
| !! | TATTCATTAAACTGTGTTAT+TGG | + | chr7_2:50822492-50822511 | None:intergenic | 20.0% |
| !!! | CTTCTAACATCTTAAAATTT+TGG | - | chr7_2:50822523-50822542 | Msa1061390:intron | 20.0% |
| !!! | GTTGTTATTTTACTTTGAAA+TGG | - | chr7_2:50822550-50822569 | Msa1061390:CDS | 20.0% |
| !!! | AATGAAATTTGATTTATGAG+AGG | - | chr7_2:50822615-50822634 | Msa1061390:CDS | 20.0% |
| !! | AGAATAATGTTTATGCTTAA+AGG | + | chr7_2:50822668-50822687 | None:intergenic | 20.0% |
| !! | AATCACAAAATAACTTAACT+AGG | + | chr7_2:50822692-50822711 | None:intergenic | 20.0% |
| ! | TTTGAAGAAACAAAAGTTGA+TGG | + | chr7_2:50821155-50821174 | None:intergenic | 25.0% |
| ! | TTTCACATATATATCACTTG+TGG | - | chr7_2:50821565-50821584 | Msa1061390:intron | 25.0% |
| ! | ATATATATCACTTGTGGTTT+GGG | - | chr7_2:50821571-50821590 | Msa1061390:intron | 25.0% |
| ! | AAAAAAACAGAGAGATTAGA+TGG | - | chr7_2:50821788-50821807 | Msa1061390:intron | 25.0% |
| !! | ACTTTAATTTCTCTATCGAA+GGG | + | chr7_2:50821836-50821855 | None:intergenic | 25.0% |
| !! | AACTTTAATTTCTCTATCGA+AGG | + | chr7_2:50821837-50821856 | None:intergenic | 25.0% |
| !!! | TAAGCTTTGATTTTAAACTC+CGG | + | chr7_2:50821914-50821933 | None:intergenic | 25.0% |
| ! | AAATCAAAGCTTACTAATGT+TGG | - | chr7_2:50821921-50821940 | Msa1061390:intron | 25.0% |
| ! | TGAGATAATGTTGAGTTTAA+AGG | - | chr7_2:50822018-50822037 | Msa1061390:intron | 25.0% |
| ! | ATGTTGAGTTTAAAGGTAAA+AGG | - | chr7_2:50822025-50822044 | Msa1061390:intron | 25.0% |
| ! | TGTTGAGTTTAAAGGTAAAA+GGG | - | chr7_2:50822026-50822045 | Msa1061390:intron | 25.0% |
| ! | CTGATTAAGCGTTTATAAAT+GGG | - | chr7_2:50822176-50822195 | Msa1061390:intron | 25.0% |
| ! | TGATTAAGCGTTTATAAATG+GGG | - | chr7_2:50822177-50822196 | Msa1061390:intron | 25.0% |
| !! | TCTTACAAGTATGTTTTGTA+AGG | - | chr7_2:50822210-50822229 | Msa1061390:intron | 25.0% |
| !! | CTTACAAGTATGTTTTGTAA+GGG | - | chr7_2:50822211-50822230 | Msa1061390:intron | 25.0% |
| ! | ATAATGTTTATGCTTAAAGG+AGG | + | chr7_2:50822665-50822684 | None:intergenic | 25.0% |
| !!! | GTTAAGTTATTTTGTGATTG+TGG | - | chr7_2:50822693-50822712 | Msa1061390:intron | 25.0% |
| !! | TATTTTGCAGATAATCAACA+AGG | - | chr7_2:50822718-50822737 | Msa1061390:intron | 25.0% |
| !! | ATTTTGCAGATAATCAACAA+GGG | - | chr7_2:50822719-50822738 | Msa1061390:intron | 25.0% |
| ! | ATGAAATTGAATGATCAAAG+AGG | + | chr7_2:50822791-50822810 | None:intergenic | 25.0% |
| ! | TTTGAAGAAACAAAAGTTGA+TGG | + | chr7_2:50821155-50821174 | None:intergenic | 25.0% |
| ! | TTTCACATATATATCACTTG+TGG | - | chr7_2:50821565-50821584 | Msa1061390:intron | 25.0% |
| ! | ATATATATCACTTGTGGTTT+GGG | - | chr7_2:50821571-50821590 | Msa1061390:intron | 25.0% |
| ! | AAAAAAACAGAGAGATTAGA+TGG | - | chr7_2:50821788-50821807 | Msa1061390:intron | 25.0% |
| !! | ACTTTAATTTCTCTATCGAA+GGG | + | chr7_2:50821836-50821855 | None:intergenic | 25.0% |
| !! | AACTTTAATTTCTCTATCGA+AGG | + | chr7_2:50821837-50821856 | None:intergenic | 25.0% |
| !!! | TAAGCTTTGATTTTAAACTC+CGG | + | chr7_2:50821914-50821933 | None:intergenic | 25.0% |
| ! | AAATCAAAGCTTACTAATGT+TGG | - | chr7_2:50821921-50821940 | Msa1061390:intron | 25.0% |
| ! | TGAGATAATGTTGAGTTTAA+AGG | - | chr7_2:50822018-50822037 | Msa1061390:intron | 25.0% |
| ! | ATGTTGAGTTTAAAGGTAAA+AGG | - | chr7_2:50822025-50822044 | Msa1061390:intron | 25.0% |
| ! | TGTTGAGTTTAAAGGTAAAA+GGG | - | chr7_2:50822026-50822045 | Msa1061390:intron | 25.0% |
| ! | CTGATTAAGCGTTTATAAAT+GGG | - | chr7_2:50822176-50822195 | Msa1061390:intron | 25.0% |
| ! | TGATTAAGCGTTTATAAATG+GGG | - | chr7_2:50822177-50822196 | Msa1061390:intron | 25.0% |
| !! | TCTTACAAGTATGTTTTGTA+AGG | - | chr7_2:50822210-50822229 | Msa1061390:intron | 25.0% |
| !! | CTTACAAGTATGTTTTGTAA+GGG | - | chr7_2:50822211-50822230 | Msa1061390:intron | 25.0% |
| ! | ATAATGTTTATGCTTAAAGG+AGG | + | chr7_2:50822665-50822684 | None:intergenic | 25.0% |
| !!! | GTTAAGTTATTTTGTGATTG+TGG | - | chr7_2:50822693-50822712 | Msa1061390:intron | 25.0% |
| !! | TATTTTGCAGATAATCAACA+AGG | - | chr7_2:50822718-50822737 | Msa1061390:intron | 25.0% |
| !! | ATTTTGCAGATAATCAACAA+GGG | - | chr7_2:50822719-50822738 | Msa1061390:intron | 25.0% |
| ! | ATGAAATTGAATGATCAAAG+AGG | + | chr7_2:50822791-50822810 | None:intergenic | 25.0% |
| !! | GATGAATGATGATGGTAATT+TGG | + | chr7_2:50821103-50821122 | None:intergenic | 30.0% |
| TTACCATCATCATTCATCTT+AGG | - | chr7_2:50821105-50821124 | Msa1061390:three_prime_UTR | 30.0% | |
| !! | TTTTACTGCATTGACAGTAA+AGG | + | chr7_2:50821223-50821242 | None:intergenic | 30.0% |
| !!! | TTTGGGTTTGTGTTATTTTC+AGG | - | chr7_2:50821356-50821375 | Msa1061390:intron | 30.0% |
| AATTCAAACCACCATTTCTT+GGG | - | chr7_2:50821403-50821422 | Msa1061390:intron | 30.0% | |
| TTACAAAGACAGCAGAAATA+TGG | - | chr7_2:50821427-50821446 | Msa1061390:intron | 30.0% | |
| CATATATATCACTTGTGGTT+TGG | - | chr7_2:50821570-50821589 | Msa1061390:intron | 30.0% | |
| ATTAAACTTGAGATCTTGAG+AGG | + | chr7_2:50821611-50821630 | None:intergenic | 30.0% | |
| ACAAACTACACCACTAAAAT+TGG | + | chr7_2:50821644-50821663 | None:intergenic | 30.0% | |
| ! | TAGTTTGTACTTGCTTTGAA+TGG | - | chr7_2:50821656-50821675 | Msa1061390:intron | 30.0% |
| ! | AGTTTGTACTTGCTTTGAAT+GGG | - | chr7_2:50821657-50821676 | Msa1061390:intron | 30.0% |
| ! | ATTGGTCTCATCATATTAGT+CGG | - | chr7_2:50821701-50821720 | Msa1061390:intron | 30.0% |
| ! | ATACATATATGTATCGATGC+CGG | - | chr7_2:50821892-50821911 | Msa1061390:intron | 30.0% |
| GTTGAGTTTAAAGGTAAAAG+GGG | - | chr7_2:50822027-50822046 | Msa1061390:intron | 30.0% | |
| CCATTTATAAACGCTTAATC+AGG | + | chr7_2:50822178-50822197 | None:intergenic | 30.0% | |
| CCTGATTAAGCGTTTATAAA+TGG | - | chr7_2:50822175-50822194 | Msa1061390:intron | 30.0% | |
| GATTAAGCGTTTATAAATGG+GGG | - | chr7_2:50822178-50822197 | Msa1061390:intron | 30.0% | |
| AGTTAGACTCAATTTCAACA+TGG | - | chr7_2:50822236-50822255 | Msa1061390:intron | 30.0% | |
| TACCCAATAAACATTTGTTC+CGG | + | chr7_2:50822391-50822410 | None:intergenic | 30.0% | |
| TAACCCAACTACAAATTCTA+AGG | - | chr7_2:50822450-50822469 | Msa1061390:intron | 30.0% | |
| AACCCAACTACAAATTCTAA+GGG | - | chr7_2:50822451-50822470 | Msa1061390:intron | 30.0% | |
| AAGATGTTAGAAGAGTCTAT+CGG | + | chr7_2:50822516-50822535 | None:intergenic | 30.0% | |
| ATTGGACTTGAAATTGGAAA+AGG | - | chr7_2:50822755-50822774 | Msa1061390:intron | 30.0% | |
| ATGATCAAAGAGGAATATCA+AGG | + | chr7_2:50822781-50822800 | None:intergenic | 30.0% | |
| ! | AGAACATGTTTTCTGTCATT+TGG | - | chr7_2:50822871-50822890 | Msa1061390:CDS | 30.0% |
| ! | GTTTTGCTTGATTTAGTACA+TGG | - | chr7_2:50822956-50822975 | Msa1061390:exon | 30.0% |
| ! | ACATAGCTAAGAACACATTT+TGG | + | chr7_2:50823011-50823030 | None:intergenic | 30.0% |
| !! | GATGAATGATGATGGTAATT+TGG | + | chr7_2:50821103-50821122 | None:intergenic | 30.0% |
| TTACCATCATCATTCATCTT+AGG | - | chr7_2:50821105-50821124 | Msa1061390:three_prime_UTR | 30.0% | |
| !! | TTTTACTGCATTGACAGTAA+AGG | + | chr7_2:50821223-50821242 | None:intergenic | 30.0% |
| !!! | TTTGGGTTTGTGTTATTTTC+AGG | - | chr7_2:50821356-50821375 | Msa1061390:intron | 30.0% |
| AATTCAAACCACCATTTCTT+GGG | - | chr7_2:50821403-50821422 | Msa1061390:intron | 30.0% | |
| TTACAAAGACAGCAGAAATA+TGG | - | chr7_2:50821427-50821446 | Msa1061390:intron | 30.0% | |
| CATATATATCACTTGTGGTT+TGG | - | chr7_2:50821570-50821589 | Msa1061390:intron | 30.0% | |
| ATTAAACTTGAGATCTTGAG+AGG | + | chr7_2:50821611-50821630 | None:intergenic | 30.0% | |
| ACAAACTACACCACTAAAAT+TGG | + | chr7_2:50821644-50821663 | None:intergenic | 30.0% | |
| ! | TAGTTTGTACTTGCTTTGAA+TGG | - | chr7_2:50821656-50821675 | Msa1061390:intron | 30.0% |
| ! | AGTTTGTACTTGCTTTGAAT+GGG | - | chr7_2:50821657-50821676 | Msa1061390:intron | 30.0% |
| ! | ATTGGTCTCATCATATTAGT+CGG | - | chr7_2:50821701-50821720 | Msa1061390:intron | 30.0% |
| ! | ATACATATATGTATCGATGC+CGG | - | chr7_2:50821892-50821911 | Msa1061390:intron | 30.0% |
| GTTGAGTTTAAAGGTAAAAG+GGG | - | chr7_2:50822027-50822046 | Msa1061390:intron | 30.0% | |
| CCATTTATAAACGCTTAATC+AGG | + | chr7_2:50822178-50822197 | None:intergenic | 30.0% | |
| CCTGATTAAGCGTTTATAAA+TGG | - | chr7_2:50822175-50822194 | Msa1061390:intron | 30.0% | |
| GATTAAGCGTTTATAAATGG+GGG | - | chr7_2:50822178-50822197 | Msa1061390:intron | 30.0% | |
| AGTTAGACTCAATTTCAACA+TGG | - | chr7_2:50822236-50822255 | Msa1061390:intron | 30.0% | |
| TACCCAATAAACATTTGTTC+CGG | + | chr7_2:50822391-50822410 | None:intergenic | 30.0% | |
| TAACCCAACTACAAATTCTA+AGG | - | chr7_2:50822450-50822469 | Msa1061390:intron | 30.0% | |
| AACCCAACTACAAATTCTAA+GGG | - | chr7_2:50822451-50822470 | Msa1061390:intron | 30.0% | |
| AAGATGTTAGAAGAGTCTAT+CGG | + | chr7_2:50822516-50822535 | None:intergenic | 30.0% | |
| ATTGGACTTGAAATTGGAAA+AGG | - | chr7_2:50822755-50822774 | Msa1061390:intron | 30.0% | |
| ATGATCAAAGAGGAATATCA+AGG | + | chr7_2:50822781-50822800 | None:intergenic | 30.0% | |
| ! | AGAACATGTTTTCTGTCATT+TGG | - | chr7_2:50822871-50822890 | Msa1061390:CDS | 30.0% |
| ! | GTTTTGCTTGATTTAGTACA+TGG | - | chr7_2:50822956-50822975 | Msa1061390:exon | 30.0% |
| ! | ACATAGCTAAGAACACATTT+TGG | + | chr7_2:50823011-50823030 | None:intergenic | 30.0% |
| !! | TTTTGTGTGGTTTGGAAGAT+GGG | + | chr7_2:50820978-50820997 | None:intergenic | 35.0% |
| !! | TTTTTGTGTGGTTTGGAAGA+TGG | + | chr7_2:50820979-50820998 | None:intergenic | 35.0% |
| !!! | TTCTTCCACTTGTTTTTGTG+TGG | + | chr7_2:50820991-50821010 | None:intergenic | 35.0% |
| ! | TGATGGTAATTTGGTTGATG+AGG | + | chr7_2:50821094-50821113 | None:intergenic | 35.0% |
| GTTCCTAAGATGAATGATGA+TGG | + | chr7_2:50821111-50821130 | None:intergenic | 35.0% | |
| ! | TTGAATTGAGGCTGTACTTT+TGG | + | chr7_2:50821390-50821409 | None:intergenic | 35.0% |
| AGAAATGGTGGTTTGAATTG+AGG | + | chr7_2:50821402-50821421 | None:intergenic | 35.0% | |
| CAATTCAAACCACCATTTCT+TGG | - | chr7_2:50821402-50821421 | Msa1061390:intron | 35.0% | |
| TTTGTAAACCCAAGAAATGG+TGG | + | chr7_2:50821414-50821433 | None:intergenic | 35.0% | |
| GTCTTTGTAAACCCAAGAAA+TGG | + | chr7_2:50821417-50821436 | None:intergenic | 35.0% | |
| !! | AATTCTAGAGCTTGCATGAT+TGG | - | chr7_2:50821450-50821469 | Msa1061390:intron | 35.0% |
| ! | TCATACAGTGCCAATTTTAG+TGG | - | chr7_2:50821631-50821650 | Msa1061390:intron | 35.0% |
| TTTAACTCTGTGTCTCGATA+AGG | + | chr7_2:50821728-50821747 | None:intergenic | 35.0% | |
| AGTTGAACAAATTAGACCGT+CGG | - | chr7_2:50821853-50821872 | Msa1061390:intron | 35.0% | |
| AGCCTATCTAATAGCATCAA+GGG | + | chr7_2:50821998-50822017 | None:intergenic | 35.0% | |
| AAGCCTATCTAATAGCATCA+AGG | + | chr7_2:50821999-50822018 | None:intergenic | 35.0% | |
| GTGTGTTAAGAGTCTCATAT+TGG | - | chr7_2:50822136-50822155 | Msa1061390:intron | 35.0% | |
| TTCAACATGGTATTAGAGTC+CGG | - | chr7_2:50822249-50822268 | Msa1061390:intron | 35.0% | |
| CTCACATTAGATGAAATGAC+CGG | - | chr7_2:50822369-50822388 | Msa1061390:intron | 35.0% | |
| TGACCGGAACAAATGTTTAT+TGG | - | chr7_2:50822385-50822404 | Msa1061390:intron | 35.0% | |
| GACCGGAACAAATGTTTATT+GGG | - | chr7_2:50822386-50822405 | Msa1061390:intron | 35.0% | |
| CACCCTTAGAATTTGTAGTT+GGG | + | chr7_2:50822456-50822475 | None:intergenic | 35.0% | |
| ACACCCTTAGAATTTGTAGT+TGG | + | chr7_2:50822457-50822476 | None:intergenic | 35.0% | |
| TGATGATATGTACCAGTACT+TGG | - | chr7_2:50822577-50822596 | Msa1061390:CDS | 35.0% | |
| GATGATATGTACCAGTACTT+GGG | - | chr7_2:50822578-50822597 | Msa1061390:CDS | 35.0% | |
| TTTATGCTTAAAGGAGGAGT+GGG | + | chr7_2:50822659-50822678 | None:intergenic | 35.0% | |
| ! | AATCAACAAGGGTATACTTG+AGG | - | chr7_2:50822730-50822749 | Msa1061390:intron | 35.0% |
| !! | TTTTGTGTGGTTTGGAAGAT+GGG | + | chr7_2:50820978-50820997 | None:intergenic | 35.0% |
| !! | TTTTTGTGTGGTTTGGAAGA+TGG | + | chr7_2:50820979-50820998 | None:intergenic | 35.0% |
| !!! | TTCTTCCACTTGTTTTTGTG+TGG | + | chr7_2:50820991-50821010 | None:intergenic | 35.0% |
| ! | TGATGGTAATTTGGTTGATG+AGG | + | chr7_2:50821094-50821113 | None:intergenic | 35.0% |
| GTTCCTAAGATGAATGATGA+TGG | + | chr7_2:50821111-50821130 | None:intergenic | 35.0% | |
| ! | TTGAATTGAGGCTGTACTTT+TGG | + | chr7_2:50821390-50821409 | None:intergenic | 35.0% |
| AGAAATGGTGGTTTGAATTG+AGG | + | chr7_2:50821402-50821421 | None:intergenic | 35.0% | |
| CAATTCAAACCACCATTTCT+TGG | - | chr7_2:50821402-50821421 | Msa1061390:intron | 35.0% | |
| TTTGTAAACCCAAGAAATGG+TGG | + | chr7_2:50821414-50821433 | None:intergenic | 35.0% | |
| GTCTTTGTAAACCCAAGAAA+TGG | + | chr7_2:50821417-50821436 | None:intergenic | 35.0% | |
| !! | AATTCTAGAGCTTGCATGAT+TGG | - | chr7_2:50821450-50821469 | Msa1061390:intron | 35.0% |
| ! | TCATACAGTGCCAATTTTAG+TGG | - | chr7_2:50821631-50821650 | Msa1061390:intron | 35.0% |
| TTTAACTCTGTGTCTCGATA+AGG | + | chr7_2:50821728-50821747 | None:intergenic | 35.0% | |
| AGTTGAACAAATTAGACCGT+CGG | - | chr7_2:50821853-50821872 | Msa1061390:intron | 35.0% | |
| AGCCTATCTAATAGCATCAA+GGG | + | chr7_2:50821998-50822017 | None:intergenic | 35.0% | |
| AAGCCTATCTAATAGCATCA+AGG | + | chr7_2:50821999-50822018 | None:intergenic | 35.0% | |
| GTGTGTTAAGAGTCTCATAT+TGG | - | chr7_2:50822136-50822155 | Msa1061390:intron | 35.0% | |
| TTCAACATGGTATTAGAGTC+CGG | - | chr7_2:50822249-50822268 | Msa1061390:intron | 35.0% | |
| CTCACATTAGATGAAATGAC+CGG | - | chr7_2:50822369-50822388 | Msa1061390:intron | 35.0% | |
| TGACCGGAACAAATGTTTAT+TGG | - | chr7_2:50822385-50822404 | Msa1061390:intron | 35.0% | |
| GACCGGAACAAATGTTTATT+GGG | - | chr7_2:50822386-50822405 | Msa1061390:intron | 35.0% | |
| CACCCTTAGAATTTGTAGTT+GGG | + | chr7_2:50822456-50822475 | None:intergenic | 35.0% | |
| ACACCCTTAGAATTTGTAGT+TGG | + | chr7_2:50822457-50822476 | None:intergenic | 35.0% | |
| TGATGATATGTACCAGTACT+TGG | - | chr7_2:50822577-50822596 | Msa1061390:CDS | 35.0% | |
| GATGATATGTACCAGTACTT+GGG | - | chr7_2:50822578-50822597 | Msa1061390:CDS | 35.0% | |
| TTTATGCTTAAAGGAGGAGT+GGG | + | chr7_2:50822659-50822678 | None:intergenic | 35.0% | |
| ! | AATCAACAAGGGTATACTTG+AGG | - | chr7_2:50822730-50822749 | Msa1061390:intron | 35.0% |
| ! | TTTGTGTGGTTTGGAAGATG+GGG | + | chr7_2:50820977-50820996 | None:intergenic | 40.0% |
| !!! | CCACTTGTTTTTGTGTGGTT+TGG | + | chr7_2:50820986-50821005 | None:intergenic | 40.0% |
| CCAAACCACACAAAAACAAG+TGG | - | chr7_2:50820983-50821002 | Msa1061390:three_prime_UTR | 40.0% | |
| GTTTGTAGAGTGAAGTGAAG+GGG | + | chr7_2:50821133-50821152 | None:intergenic | 40.0% | |
| GGTTTGTAGAGTGAAGTGAA+GGG | + | chr7_2:50821134-50821153 | None:intergenic | 40.0% | |
| ! | TGGTTTGTAGAGTGAAGTGA+AGG | + | chr7_2:50821135-50821154 | None:intergenic | 40.0% |
| AATGCAGTAAAACCTCCTTC+TGG | - | chr7_2:50821231-50821250 | Msa1061390:three_prime_UTR | 40.0% | |
| GATGAAATGCATACACCAGA+AGG | + | chr7_2:50821249-50821268 | None:intergenic | 40.0% | |
| CACTGCATGAATCTGTGAAT+TGG | - | chr7_2:50821969-50821988 | Msa1061390:intron | 40.0% | |
| GACCCTTGATGCTATTAGAT+AGG | - | chr7_2:50821993-50822012 | Msa1061390:intron | 40.0% | |
| ATTATGAGTGGCCTGATAGT+AGG | + | chr7_2:50822294-50822313 | None:intergenic | 40.0% | |
| GCGTGGATATAGATTATGAG+TGG | + | chr7_2:50822306-50822325 | None:intergenic | 40.0% | |
| TAAACACAACTCCACGAAAC+CGG | + | chr7_2:50822432-50822451 | None:intergenic | 40.0% | |
| ! | ACTGTGTTATTGGGTCACTT+AGG | + | chr7_2:50822482-50822501 | None:intergenic | 40.0% |
| GTTTATGCTTAAAGGAGGAG+TGG | + | chr7_2:50822660-50822679 | None:intergenic | 40.0% | |
| ! | AAGGGTATACTTGAGGTGAT+TGG | - | chr7_2:50822737-50822756 | Msa1061390:intron | 40.0% |
| GAGGTGATTGGACTTGAAAT+TGG | - | chr7_2:50822749-50822768 | Msa1061390:intron | 40.0% | |
| TTTGGCTACATCAACTTCTG+TGG | - | chr7_2:50822889-50822908 | Msa1061390:CDS | 40.0% | |
| ! | TTTGTGTGGTTTGGAAGATG+GGG | + | chr7_2:50820977-50820996 | None:intergenic | 40.0% |
| !!! | CCACTTGTTTTTGTGTGGTT+TGG | + | chr7_2:50820986-50821005 | None:intergenic | 40.0% |
| CCAAACCACACAAAAACAAG+TGG | - | chr7_2:50820983-50821002 | Msa1061390:three_prime_UTR | 40.0% | |
| GTTTGTAGAGTGAAGTGAAG+GGG | + | chr7_2:50821133-50821152 | None:intergenic | 40.0% | |
| GGTTTGTAGAGTGAAGTGAA+GGG | + | chr7_2:50821134-50821153 | None:intergenic | 40.0% | |
| ! | TGGTTTGTAGAGTGAAGTGA+AGG | + | chr7_2:50821135-50821154 | None:intergenic | 40.0% |
| AATGCAGTAAAACCTCCTTC+TGG | - | chr7_2:50821231-50821250 | Msa1061390:three_prime_UTR | 40.0% | |
| GATGAAATGCATACACCAGA+AGG | + | chr7_2:50821249-50821268 | None:intergenic | 40.0% | |
| CACTGCATGAATCTGTGAAT+TGG | - | chr7_2:50821969-50821988 | Msa1061390:intron | 40.0% | |
| GACCCTTGATGCTATTAGAT+AGG | - | chr7_2:50821993-50822012 | Msa1061390:intron | 40.0% | |
| ATTATGAGTGGCCTGATAGT+AGG | + | chr7_2:50822294-50822313 | None:intergenic | 40.0% | |
| GCGTGGATATAGATTATGAG+TGG | + | chr7_2:50822306-50822325 | None:intergenic | 40.0% | |
| TAAACACAACTCCACGAAAC+CGG | + | chr7_2:50822432-50822451 | None:intergenic | 40.0% | |
| ! | ACTGTGTTATTGGGTCACTT+AGG | + | chr7_2:50822482-50822501 | None:intergenic | 40.0% |
| GTTTATGCTTAAAGGAGGAG+TGG | + | chr7_2:50822660-50822679 | None:intergenic | 40.0% | |
| ! | AAGGGTATACTTGAGGTGAT+TGG | - | chr7_2:50822737-50822756 | Msa1061390:intron | 40.0% |
| GAGGTGATTGGACTTGAAAT+TGG | - | chr7_2:50822749-50822768 | Msa1061390:intron | 40.0% | |
| TTTGGCTACATCAACTTCTG+TGG | - | chr7_2:50822889-50822908 | Msa1061390:CDS | 40.0% | |
| GCAGTTATCAACCATTGCCA+TGG | - | chr7_2:50821065-50821084 | Msa1061390:three_prime_UTR | 45.0% | |
| !! | TTTGGTTGATGAGGTAGCCA+TGG | + | chr7_2:50821085-50821104 | None:intergenic | 45.0% |
| AAGGAAACTCTCTTCCTGTG+AGG | + | chr7_2:50821204-50821223 | None:intergenic | 45.0% | |
| GAAATGCATACACCAGAAGG+AGG | + | chr7_2:50821246-50821265 | None:intergenic | 45.0% | |
| GCTTGCATGATTGGACTCAT+TGG | - | chr7_2:50821459-50821478 | Msa1061390:intron | 45.0% | |
| TCTTGAGAGGAACACACTCA+AGG | + | chr7_2:50821598-50821617 | None:intergenic | 45.0% | |
| GTTGTGTGATCAAGATCCGA+CGG | + | chr7_2:50821872-50821891 | None:intergenic | 45.0% | |
| CCCTTACGCATAGCACTATT+GGG | + | chr7_2:50822335-50822354 | None:intergenic | 45.0% | |
| CCCAATAGTGCTATGCGTAA+GGG | - | chr7_2:50822332-50822351 | Msa1061390:intron | 45.0% | |
| CCAATAGTGCTATGCGTAAG+GGG | - | chr7_2:50822333-50822352 | Msa1061390:intron | 45.0% | |
| CAATAGTGCTATGCGTAAGG+GGG | - | chr7_2:50822334-50822353 | Msa1061390:intron | 45.0% | |
| ACAATCCTCACATCTCAAGC+CGG | - | chr7_2:50822410-50822429 | Msa1061390:intron | 45.0% | |
| TACCAGTACTTGGGTGTCAA+GGG | - | chr7_2:50822587-50822606 | Msa1061390:CDS | 45.0% | |
| GCAGTTATCAACCATTGCCA+TGG | - | chr7_2:50821065-50821084 | Msa1061390:three_prime_UTR | 45.0% | |
| !! | TTTGGTTGATGAGGTAGCCA+TGG | + | chr7_2:50821085-50821104 | None:intergenic | 45.0% |
| AAGGAAACTCTCTTCCTGTG+AGG | + | chr7_2:50821204-50821223 | None:intergenic | 45.0% | |
| GAAATGCATACACCAGAAGG+AGG | + | chr7_2:50821246-50821265 | None:intergenic | 45.0% | |
| GCTTGCATGATTGGACTCAT+TGG | - | chr7_2:50821459-50821478 | Msa1061390:intron | 45.0% | |
| TCTTGAGAGGAACACACTCA+AGG | + | chr7_2:50821598-50821617 | None:intergenic | 45.0% | |
| GTTGTGTGATCAAGATCCGA+CGG | + | chr7_2:50821872-50821891 | None:intergenic | 45.0% | |
| CCCTTACGCATAGCACTATT+GGG | + | chr7_2:50822335-50822354 | None:intergenic | 45.0% | |
| CCCAATAGTGCTATGCGTAA+GGG | - | chr7_2:50822332-50822351 | Msa1061390:intron | 45.0% | |
| CCAATAGTGCTATGCGTAAG+GGG | - | chr7_2:50822333-50822352 | Msa1061390:intron | 45.0% | |
| CAATAGTGCTATGCGTAAGG+GGG | - | chr7_2:50822334-50822353 | Msa1061390:intron | 45.0% | |
| ACAATCCTCACATCTCAAGC+CGG | - | chr7_2:50822410-50822429 | Msa1061390:intron | 45.0% | |
| TACCAGTACTTGGGTGTCAA+GGG | - | chr7_2:50822587-50822606 | Msa1061390:CDS | 45.0% | |
| ! | TGTGGTTTGGAAGATGGGGT+TGG | + | chr7_2:50820973-50820992 | None:intergenic | 50.0% |
| TGATGAGGTAGCCATGGCAA+TGG | + | chr7_2:50821079-50821098 | None:intergenic | 50.0% | |
| TTTGAATGGGACCCTGCAAG+TGG | - | chr7_2:50821670-50821689 | Msa1061390:intron | 50.0% | |
| TTGAATGGGACCCTGCAAGT+GGG | - | chr7_2:50821671-50821690 | Msa1061390:intron | 50.0% | |
| CCTGATAGTAGGTGGCTCAA+CGG | + | chr7_2:50822283-50822302 | None:intergenic | 50.0% | |
| ATGAGTGGCCTGATAGTAGG+TGG | + | chr7_2:50822291-50822310 | None:intergenic | 50.0% | |
| GCCCAATAGTGCTATGCGTA+AGG | - | chr7_2:50822331-50822350 | Msa1061390:intron | 50.0% | |
| CCCCTTACGCATAGCACTAT+TGG | + | chr7_2:50822336-50822355 | None:intergenic | 50.0% | |
| GTACCAGTACTTGGGTGTCA+AGG | - | chr7_2:50822586-50822605 | Msa1061390:CDS | 50.0% | |
| TGCTTAAAGGAGGAGTGGGA+AGG | + | chr7_2:50822655-50822674 | None:intergenic | 50.0% | |
| ! | TGTGGTTTGGAAGATGGGGT+TGG | + | chr7_2:50820973-50820992 | None:intergenic | 50.0% |
| TGATGAGGTAGCCATGGCAA+TGG | + | chr7_2:50821079-50821098 | None:intergenic | 50.0% | |
| TTTGAATGGGACCCTGCAAG+TGG | - | chr7_2:50821670-50821689 | Msa1061390:intron | 50.0% | |
| TTGAATGGGACCCTGCAAGT+GGG | - | chr7_2:50821671-50821690 | Msa1061390:intron | 50.0% | |
| CCTGATAGTAGGTGGCTCAA+CGG | + | chr7_2:50822283-50822302 | None:intergenic | 50.0% | |
| ATGAGTGGCCTGATAGTAGG+TGG | + | chr7_2:50822291-50822310 | None:intergenic | 50.0% | |
| GCCCAATAGTGCTATGCGTA+AGG | - | chr7_2:50822331-50822350 | Msa1061390:intron | 50.0% | |
| CCCCTTACGCATAGCACTAT+TGG | + | chr7_2:50822336-50822355 | None:intergenic | 50.0% | |
| GTACCAGTACTTGGGTGTCA+AGG | - | chr7_2:50822586-50822605 | Msa1061390:CDS | 50.0% | |
| TGCTTAAAGGAGGAGTGGGA+AGG | + | chr7_2:50822655-50822674 | None:intergenic | 50.0% | |
| ! | CTGCTGGTCTGGTCAAGGAA+TGG | + | chr7_2:50821179-50821198 | None:intergenic | 55.0% |
| TGGCTCAACGGACGTTGAAC+CGG | + | chr7_2:50822271-50822290 | None:intergenic | 55.0% | |
| CCGTTGAGCCACCTACTATC+AGG | - | chr7_2:50822280-50822299 | Msa1061390:intron | 55.0% | |
| !! | CGAAACCGGCTTGAGATGTG+AGG | + | chr7_2:50822418-50822437 | None:intergenic | 55.0% |
| ! | CACATCTCAAGCCGGTTTCG+TGG | - | chr7_2:50822418-50822437 | Msa1061390:intron | 55.0% |
| TGCCCTTGACACCCAAGTAC+TGG | + | chr7_2:50822592-50822611 | None:intergenic | 55.0% | |
| ! | CTGCTGGTCTGGTCAAGGAA+TGG | + | chr7_2:50821179-50821198 | None:intergenic | 55.0% |
| TGGCTCAACGGACGTTGAAC+CGG | + | chr7_2:50822271-50822290 | None:intergenic | 55.0% | |
| CCGTTGAGCCACCTACTATC+AGG | - | chr7_2:50822280-50822299 | Msa1061390:intron | 55.0% | |
| !! | CGAAACCGGCTTGAGATGTG+AGG | + | chr7_2:50822418-50822437 | None:intergenic | 55.0% |
| ! | CACATCTCAAGCCGGTTTCG+TGG | - | chr7_2:50822418-50822437 | Msa1061390:intron | 55.0% |
| TGCCCTTGACACCCAAGTAC+TGG | + | chr7_2:50822592-50822611 | None:intergenic | 55.0% | |
| !! | AGGTGCTGCTGGTCTGGTCA+AGG | + | chr7_2:50821184-50821203 | None:intergenic | 60.0% |
| !! | CTCTTCCTGTGAGGTGCTGC+TGG | + | chr7_2:50821195-50821214 | None:intergenic | 60.0% |
| AATGGGACCCTGCAAGTGGG+CGG | - | chr7_2:50821674-50821693 | Msa1061390:intron | 60.0% | |
| AATCCCACCGCCCACTTGCA+GGG | + | chr7_2:50821684-50821703 | None:intergenic | 60.0% | |
| GCACTATTGGGCTTCGTGCG+TGG | + | chr7_2:50822323-50822342 | None:intergenic | 60.0% | |
| !! | AGGTGCTGCTGGTCTGGTCA+AGG | + | chr7_2:50821184-50821203 | None:intergenic | 60.0% |
| !! | CTCTTCCTGTGAGGTGCTGC+TGG | + | chr7_2:50821195-50821214 | None:intergenic | 60.0% |
| AATGGGACCCTGCAAGTGGG+CGG | - | chr7_2:50821674-50821693 | Msa1061390:intron | 60.0% | |
| AATCCCACCGCCCACTTGCA+GGG | + | chr7_2:50821684-50821703 | None:intergenic | 60.0% | |
| GCACTATTGGGCTTCGTGCG+TGG | + | chr7_2:50822323-50822342 | None:intergenic | 60.0% | |
| !! | CCTGTGAGGTGCTGCTGGTC+TGG | + | chr7_2:50821190-50821209 | None:intergenic | 65.0% |
| CCAGACCAGCAGCACCTCAC+AGG | - | chr7_2:50821187-50821206 | Msa1061390:three_prime_UTR | 65.0% | |
| CAATCCCACCGCCCACTTGC+AGG | + | chr7_2:50821685-50821704 | None:intergenic | 65.0% | |
| CTGCAAGTGGGCGGTGGGAT+TGG | - | chr7_2:50821683-50821702 | Msa1061390:intron | 65.0% | |
| !! | CCTGTGAGGTGCTGCTGGTC+TGG | + | chr7_2:50821190-50821209 | None:intergenic | 65.0% |
| CCAGACCAGCAGCACCTCAC+AGG | - | chr7_2:50821187-50821206 | Msa1061390:three_prime_UTR | 65.0% | |
| CAATCCCACCGCCCACTTGC+AGG | + | chr7_2:50821685-50821704 | None:intergenic | 65.0% | |
| CTGCAAGTGGGCGGTGGGAT+TGG | - | chr7_2:50821683-50821702 | Msa1061390:intron | 65.0% | |
| GGACCCTGCAAGTGGGCGGT+GGG | - | chr7_2:50821678-50821697 | Msa1061390:intron | 70.0% | |
| GGACCCTGCAAGTGGGCGGT+GGG | - | chr7_2:50821678-50821697 | Msa1061390:intron | 70.0% | |
| GGGACCCTGCAAGTGGGCGG+TGG | - | chr7_2:50821677-50821696 | Msa1061390:intron | 75.0% | |
| GGGACCCTGCAAGTGGGCGG+TGG | - | chr7_2:50821677-50821696 | Msa1061390:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 50820968 | 50823082 | 50820968 | ID=Msa1061390;Name=Msa1061390 |
| chr7_2 | mRNA | 50820968 | 50823082 | 50820968 | ID=Msa1061390-mRNA-1;Parent=Msa1061390;Name=Msa1061390-mRNA-1;_AED=0.08;_eAED=0.08;_QI=116|1|1|1|1|1|3|286|120 |
| chr7_2 | exon | 50820968 | 50821322 | 50820968 | ID=Msa1061390-mRNA-1:exon:9196;Parent=Msa1061390-mRNA-1 |
| chr7_2 | exon | 50822550 | 50822672 | 50822550 | ID=Msa1061390-mRNA-1:exon:9195;Parent=Msa1061390-mRNA-1 |
| chr7_2 | exon | 50822796 | 50823082 | 50822796 | ID=Msa1061390-mRNA-1:exon:9194;Parent=Msa1061390-mRNA-1 |
| chr7_2 | five_prime_UTR | 50822967 | 50823082 | 50822967 | ID=Msa1061390-mRNA-1:five_prime_utr;Parent=Msa1061390-mRNA-1 |
| chr7_2 | CDS | 50822796 | 50822966 | 50822796 | ID=Msa1061390-mRNA-1:cds;Parent=Msa1061390-mRNA-1 |
| chr7_2 | CDS | 50822550 | 50822672 | 50822550 | ID=Msa1061390-mRNA-1:cds;Parent=Msa1061390-mRNA-1 |
| chr7_2 | CDS | 50821254 | 50821322 | 50821254 | ID=Msa1061390-mRNA-1:cds;Parent=Msa1061390-mRNA-1 |
| chr7_2 | three_prime_UTR | 50820968 | 50821253 | 50820968 | ID=Msa1061390-mRNA-1:three_prime_utr;Parent=Msa1061390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
