AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0705710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0705710 MtrunA17_Chr8g0384361 100.000 238 0 0 184 421 1 238 5.42e-178 496
Msa0705710 MtrunA17_Chr8g0384371 93.939 165 8 1 14 178 15 177 7.76e-107 313
Msa0705710 MtrunA17_Chr4g0061411 34.049 326 191 8 74 390 34 344 5.81e-49 176
Msa0705710 MtrunA17_Chr4g0062751 35.494 324 181 11 78 396 218 518 1.31e-42 158
Msa0705710 MtrunA17_Chr2g0321941 31.429 315 193 6 76 385 48 344 7.07e-42 152
Msa0705710 MtrunA17_Chr5g0393401 33.571 140 90 2 199 337 152 289 2.13e-18 87.0
Msa0705710 MtrunA17_Chr3g0117101 26.101 318 194 9 37 338 262 554 2.20e-18 87.8
Msa0705710 MtrunA17_Chr3g0146071 28.139 231 148 6 114 337 67 286 2.25e-18 87.0
Msa0705710 MtrunA17_Chr4g0027021 29.677 155 105 2 199 351 136 288 9.51e-16 79.0
Msa0705710 MtrunA17_Chr1g0151631 25.632 277 175 10 115 384 83 335 5.93e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0705710 AT4G33470.1 71.537 397 107 1 31 421 27 423 0.0 603
Msa0705710 AT5G61060.1 32.394 355 210 10 76 419 44 379 1.66e-48 175
Msa0705710 AT5G61060.2 32.113 355 215 9 76 419 44 383 2.04e-48 175
Msa0705710 AT5G61070.1 35.636 275 156 8 154 419 150 412 1.57e-45 167
Msa0705710 AT1G08460.1 29.745 353 219 8 76 420 37 368 3.32e-45 161
Msa0705710 AT3G18520.4 45.588 204 102 5 189 388 266 464 4.25e-45 164
Msa0705710 AT3G18520.1 45.813 203 101 5 189 387 266 463 4.82e-45 164
Msa0705710 AT3G18520.2 45.588 204 102 5 189 388 266 464 7.95e-45 164
Msa0705710 AT3G18520.3 45.503 189 94 5 189 373 266 449 3.44e-39 146
Msa0705710 AT1G08460.2 32.296 257 147 7 76 324 37 274 1.16e-34 131
Msa0705710 AT4G38130.2 26.207 290 178 9 62 337 18 285 1.10e-17 85.5
Msa0705710 AT5G63110.1 34.043 141 90 2 199 338 152 290 1.42e-17 85.1
Msa0705710 AT4G38130.1 26.552 290 177 9 62 337 18 285 2.27e-17 84.3
Msa0705710 AT3G44680.1 28.440 218 137 7 199 409 136 341 3.32e-16 80.5
Msa0705710 AT5G35600.1 25.514 243 155 7 107 337 52 280 3.60e-13 71.2

Find 142 sgRNAs with CRISPR-Local

Find 454 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTCTTCATACAAAATATT+TGG 0.067233 4_4:-78560832 None:intergenic
CCACACCACAAGCACAATTT+TGG 0.092746 4_4:-78555651 None:intergenic
CATGCAAGAGCCTATGTTTC+TGG 0.144607 4_4:+78556911 Msa0705710:CDS
CTGGATATAATCAATAATTA+AGG 0.180708 4_4:-78555479 None:intergenic
GACATCATTCTTGTTTCTGC+TGG 0.224706 4_4:+78560382 Msa0705710:CDS
CGATGGATTGCCTTCTTCTA+TGG 0.238383 4_4:-78561063 None:intergenic
TTATTCAGTTGCTCCATCTA+TGG 0.271819 4_4:+78555837 Msa0705710:CDS
CTTCCTCTTCCTGGAGGTTC+AGG 0.276489 4_4:+78560295 Msa0705710:CDS
GACACATTTCGTGCTCTTCT+TGG 0.276981 4_4:+78560778 Msa0705710:CDS
TCTGATCTGATTGTATAAAA+AGG 0.288559 4_4:-78555417 None:intergenic
CAAGTAAAGCGCTTGCTTAA+TGG 0.300283 4_4:+78560959 Msa0705710:three_prime_UTR
CAAAAGTGAAGTTCTTATTC+AGG 0.300854 4_4:-78561104 None:intergenic
ACACATTTCGTGCTCTTCTT+GGG 0.305035 4_4:+78560779 Msa0705710:CDS
CAGAAGCCCATAGGTCCTTT+TGG 0.312668 4_4:-78558866 None:intergenic
TCAAAACATGCCATTATCTA+TGG 0.315286 4_4:+78560919 Msa0705710:three_prime_UTR
TTACATGATGATGATGATTA+AGG 0.327237 4_4:-78555705 None:intergenic
GGAACTCTAAAATGTGATTC+TGG 0.327663 4_4:-78555964 None:intergenic
ACATTAAATCTTCCTCTTCC+TGG 0.333702 4_4:+78560286 Msa0705710:CDS
CTTATTGTCGTTGATGGTTC+GGG 0.337854 4_4:+78557856 Msa0705710:CDS
AAATTTGACGAGGTGGGTGC+TGG 0.346013 4_4:+78560247 Msa0705710:CDS
GCCTTCTTCTATGGGACAAA+TGG 0.346989 4_4:-78561054 None:intergenic
ATCCAGAAAGAAAATTTGTT+TGG 0.347787 4_4:+78555496 Msa0705710:five_prime_UTR
CGTCATGCTCAGCGTGTTCA+TGG 0.349689 4_4:+78558917 Msa0705710:CDS
ACTTATTGTCGTTGATGGTT+CGG 0.352826 4_4:+78557855 Msa0705710:CDS
GCTCTTCATACAAAATATTT+GGG 0.352989 4_4:-78560831 None:intergenic
ACCTGATTGTGGCCCATAGA+TGG 0.365380 4_4:-78555850 None:intergenic
TCCATCTATGGGCCACAATC+AGG 0.365718 4_4:+78555849 Msa0705710:CDS
GAGAGCGAGGAAGGTAGGAG+GGG 0.377260 4_4:-78555557 None:intergenic
TGGAGGGAAGTGAGAATTGC+AGG 0.379250 4_4:-78555985 None:intergenic
AAAGGTGTGAAGAAATGTTT+AGG 0.380313 4_4:+78555751 Msa0705710:CDS
AAGGGACTTATTGTCGTTGA+TGG 0.384109 4_4:+78557850 Msa0705710:CDS
GGAGAGCGAGGAAGGTAGGA+GGG 0.384362 4_4:-78555558 None:intergenic
CGCCATTCCAAAAGGACCTA+TGG 0.385432 4_4:+78558859 Msa0705710:CDS
TGGAAGAATCAGAGAAATAA+AGG 0.387450 4_4:+78555733 Msa0705710:CDS
CAAGCGCTTTACTTGCCTAA+TGG 0.390494 4_4:-78560951 None:intergenic
TTGAAGTGAGCTTCATTTGT+TGG 0.400600 4_4:-78556005 None:intergenic
ATGCAAGAGCCTATGTTTCT+GGG 0.402764 4_4:+78556912 Msa0705710:CDS
AGGAGGAGAGCGAGGAAGGT+AGG 0.403116 4_4:-78555562 None:intergenic
AAGAAGGAGGAGAGCGAGGA+AGG 0.403131 4_4:-78555566 None:intergenic
ACCCACCTCGTCAAATTTGC+CGG 0.403327 4_4:-78560242 None:intergenic
AGGAGAGCGAGGAAGGTAGG+AGG 0.408299 4_4:-78555559 None:intergenic
ACAGGTTATGGATCAAGCTT+TGG 0.409172 4_4:+78557825 Msa0705710:intron
GGTGTGGACCGTGGTATAAC+AGG 0.423351 4_4:+78555667 Msa0705710:CDS
TCGTCAAATTTGCCGGTACC+TGG 0.425503 4_4:-78560235 None:intergenic
GTTGAGACGGCCATAGATAA+TGG 0.427370 4_4:-78560929 None:intergenic
GAGGAAGAAGGAGGAGAGCG+AGG 0.445208 4_4:-78555570 None:intergenic
TGGATATAATCAATAATTAA+GGG 0.445692 4_4:-78555478 None:intergenic
GCTAATCTTCAATTAACAAC+GGG 0.447179 4_4:+78560637 Msa0705710:CDS
AAGGTAGGAGGGGAGGTGCA+TGG 0.447265 4_4:-78555547 None:intergenic
TTTGGAATGGCGTGATGTCC+TGG 0.452922 4_4:-78558848 None:intergenic
ATTCATGGTGCAGACCTTCC+AGG 0.454052 4_4:+78558057 Msa0705710:intron
ACATCATTCTTGTTTCTGCT+GGG 0.459212 4_4:+78560383 Msa0705710:CDS
CTATGTTTCTGGGCTTGAAA+AGG 0.464599 4_4:+78556922 Msa0705710:CDS
ATGACTCAATTGCTGAATAG+AGG 0.465153 4_4:-78555803 None:intergenic
TATTCAGTTGCTCCATCTAT+GGG 0.475551 4_4:+78555838 Msa0705710:CDS
TCAATAGTAGCAGCTGGTGC+TGG 0.476526 4_4:+78558082 Msa0705710:CDS
GATGGATTGCCTTCTTCTAT+GGG 0.479128 4_4:-78561062 None:intergenic
GACGAGGTGGGTGCTGGGGA+TGG 0.480109 4_4:+78560253 Msa0705710:CDS
TTTGATGTTCACCACGGGAA+TGG 0.481143 4_4:+78558965 Msa0705710:CDS
GCTCAGGATGGAAGCTATCC+AGG 0.481149 4_4:+78560217 Msa0705710:intron
AGCTTACTTGATGGAAGGAA+AGG 0.484055 4_4:-78559027 None:intergenic
AATTTGACGAGGTGGGTGCT+GGG 0.485533 4_4:+78560248 Msa0705710:CDS
CACATTTCGTGCTCTTCTTG+GGG 0.488682 4_4:+78560780 Msa0705710:CDS
ATTTCGTTTGTCAGGTATGA+TGG 0.492454 4_4:+78560595 Msa0705710:intron
AACTAGCAAAAGACTTATGT+GGG 0.492815 4_4:+78560692 Msa0705710:CDS
AAAAGTGAAGTTCTTATTCA+GGG 0.494273 4_4:-78561103 None:intergenic
CAACTAGCAAAAGACTTATG+TGG 0.495347 4_4:+78560691 Msa0705710:CDS
CTGAGCATGACGAGCTGCAA+TGG 0.497183 4_4:-78558906 None:intergenic
CCTTCTTCCTCCTCCTCATA+CGG 0.502235 4_4:+78555582 Msa0705710:five_prime_UTR
TCTTCTTGGGGACAAAAGCT+TGG 0.502408 4_4:+78560792 Msa0705710:CDS
GAGAGAGAGAGTACCGTATG+AGG 0.506612 4_4:-78555595 None:intergenic
GTGGGTGCTGGGGATGGTGA+AGG 0.506800 4_4:+78560259 Msa0705710:CDS
GAGAGTACCGTATGAGGAGG+AGG 0.510434 4_4:-78555589 None:intergenic
CCTTCTTCTATGGGACAAAT+GGG 0.512837 4_4:-78561053 None:intergenic
CCCATTTGTCCCATAGAAGA+AGG 0.515320 4_4:+78561053 Msa0705710:three_prime_UTR
CTATGGCCGTCTCAACCATT+AGG 0.518941 4_4:+78560936 Msa0705710:three_prime_UTR
AGCGAGGAAGGTAGGAGGGG+AGG 0.521835 4_4:-78555554 None:intergenic
CAGCTGCTACTATTGACTCC+TGG 0.524295 4_4:-78558075 None:intergenic
TTCAGCAATTGAGTCATGCT+CGG 0.524641 4_4:+78555809 Msa0705710:CDS
GCAGAAACAAGAATGATGTC+TGG 0.525949 4_4:-78560379 None:intergenic
ATCATCATCATGTAAACAAG+TGG 0.526699 4_4:+78555713 Msa0705710:CDS
GGACATCACGCCATTCCAAA+AGG 0.528420 4_4:+78558851 Msa0705710:CDS
CCGTATGAGGAGGAGGAAGA+AGG 0.528899 4_4:-78555582 None:intergenic
TACTTGCCTAATGGTTGAGA+CGG 0.530555 4_4:-78560942 None:intergenic
CTTATAGCTTACTTGATGGA+AGG 0.536704 4_4:-78559032 None:intergenic
GTTAATTGAAGATTAGCTAG+TGG 0.538185 4_4:-78560631 None:intergenic
GCAGTATCACCTGAACCTCC+AGG 0.541210 4_4:-78560304 None:intergenic
ATGGATCAAGCTTTGGAGAA+GGG 0.542742 4_4:+78557832 Msa0705710:CDS
ACAAATGAAGCTCACTTCAA+AGG 0.545527 4_4:+78556008 Msa0705710:CDS
TCACCTGAACCTCCAGGAAG+AGG 0.547363 4_4:-78560298 None:intergenic
GCCATTCCAAAAGGACCTAT+GGG 0.549537 4_4:+78558860 Msa0705710:CDS
CAGGAGTCAATAGTAGCAGC+TGG 0.555060 4_4:+78558076 Msa0705710:CDS
GGCTTAAATCTTTGAGCACA+AGG 0.555373 4_4:-78560358 None:intergenic
GATGGAAGCTATCCAGGTAC+CGG 0.560974 4_4:+78560223 Msa0705710:CDS
GCAATGTCATCGGTAGAAGC+AGG 0.562346 4_4:-78556881 None:intergenic
GATCACCACTGAGTCAACTA+AGG 0.563005 4_4:-78558110 None:intergenic
CAAGTCTCTTTCATATTCAG+TGG 0.567575 4_4:+78560753 Msa0705710:CDS
CCAAAATTGTGCTTGTGGTG+TGG 0.570945 4_4:+78555651 Msa0705710:CDS
AGCTAATCTTCAATTAACAA+CGG 0.571327 4_4:+78560636 Msa0705710:CDS
TATGGATCAAGCTTTGGAGA+AGG 0.575070 4_4:+78557831 Msa0705710:CDS
TACCGGCAAATTTGACGAGG+TGG 0.579159 4_4:+78560240 Msa0705710:CDS
ACCACAACAATCTTGTACGA+TGG 0.581789 4_4:-78561080 None:intergenic
AAGTGAGCTTCATTTGTTGG+AGG 0.588130 4_4:-78556002 None:intergenic
TGACTCAATTGCTGAATAGA+GGG 0.593945 4_4:-78555802 None:intergenic
CATCATTTGTTCCATTCCCG+TGG 0.594263 4_4:-78558976 None:intergenic
ATTTGACGAGGTGGGTGCTG+GGG 0.594286 4_4:+78560249 Msa0705710:CDS
TTGACTTTGATGTTCACCAC+GGG 0.594561 4_4:+78558960 Msa0705710:CDS
TTATGCATGATTCAGTTCCG+TGG 0.595575 4_4:+78556827 Msa0705710:intron
AGTGAGCTTCATTTGTTGGA+GGG 0.596920 4_4:-78556001 None:intergenic
AATGGGACGATGGCCACACA+AGG 0.610889 4_4:-78561036 None:intergenic
TTAAATCTTCCTCTTCCTGG+AGG 0.612077 4_4:+78560289 Msa0705710:CDS
CTTATCAATGCAAAACCAGT+GGG 0.618120 4_4:-78558821 None:intergenic
ATCAATGCAAAACCAGTGGG+TGG 0.619217 4_4:-78558818 None:intergenic
ATGCACACTTGCAATGTCAT+CGG 0.619609 4_4:-78556891 None:intergenic
TTGATTTCCCTGTTATACCA+CGG 0.621030 4_4:-78555675 None:intergenic
TAATGTCTATATCCCTTGTG+TGG 0.622857 4_4:+78561023 Msa0705710:three_prime_UTR
AAATTTGTTTGGCGCTGCTG+CGG 0.623992 4_4:+78555507 Msa0705710:five_prime_UTR
ACAGTGGAAGTAGCATATGT+TGG 0.624738 4_4:-78557880 None:intergenic
TGCTACTATTGACTCCTGGA+AGG 0.629314 4_4:-78558071 None:intergenic
AGAGAGAGTACCGTATGAGG+AGG 0.630752 4_4:-78555592 None:intergenic
ACCGGCAAATTTGACGAGGT+GGG 0.637709 4_4:+78560241 Msa0705710:CDS
ATAATGAAAGATCCACCCAC+TGG 0.638098 4_4:+78558806 Msa0705710:CDS
AGATTAAGCAAGCAATTCAG+AGG 0.639466 4_4:+78560863 Msa0705710:CDS
ATGACCCAAAATTGTGCTTG+TGG 0.640749 4_4:+78555646 Msa0705710:CDS
TATGAGGAGGAGGAAGAAGG+AGG 0.640764 4_4:-78555579 None:intergenic
CTATGGGACAAATGGGACGA+TGG 0.651142 4_4:-78561046 None:intergenic
AGGAAGAGGAAGATTTAATG+TGG 0.653031 4_4:-78560284 None:intergenic
GTTCAATGACATCAGAGCCA+CGG 0.655930 4_4:-78556844 None:intergenic
TCTTATCAATGCAAAACCAG+TGG 0.657521 4_4:-78558822 None:intergenic
TTTGCATTGATAAGACCACC+AGG 0.661033 4_4:+78558830 Msa0705710:CDS
TCCATCGTACAAGATTGTTG+TGG 0.668798 4_4:+78561079 Msa0705710:three_prime_UTR
ATTGACTTTGATGTTCACCA+CGG 0.680357 4_4:+78558959 Msa0705710:CDS
TAGCTAGTGGATCTAACACA+TGG 0.688378 4_4:-78560618 None:intergenic
TGTGCTTGTGGTGTGGACCG+TGG 0.692095 4_4:+78555658 Msa0705710:CDS
ATTAGCCTTAGTTGACTCAG+TGG 0.692844 4_4:+78558105 Msa0705710:CDS
GTGTGGACCGTGGTATAACA+GGG 0.697433 4_4:+78555668 Msa0705710:CDS
ATGGGACGATGGCCACACAA+GGG 0.699848 4_4:-78561035 None:intergenic
CTAGCAAAAGACTTATGTGG+GGG 0.704013 4_4:+78560694 Msa0705710:CDS
ACTAGCAAAAGACTTATGTG+GGG 0.708262 4_4:+78560693 Msa0705710:CDS
AGGTACCGGCAAATTTGACG+AGG 0.728582 4_4:+78560237 Msa0705710:CDS
GGAATGGCGTGATGTCCTGG+TGG 0.728966 4_4:-78558845 None:intergenic
ATTGTGCAGAAACCTGATTG+TGG 0.764552 4_4:-78555861 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGAAAAATGTATAAATAA+AGG + chr4_4:78556346-78556365 Msa0705710:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG + chr4_4:78556347-78556366 Msa0705710:intron 10.0%
!! ATATTATATTCTATAATACT+CGG + chr4_4:78559437-78559456 Msa0705710:intron 10.0%
!! ATTTAATAACTTCAATTTAA+TGG + chr4_4:78560195-78560214 Msa0705710:intron 10.0%
!! TGGATATAATCAATAATTAA+GGG - chr4_4:78555481-78555500 None:intergenic 15.0%
!! AAAATTGTGTCAATTAAATT+GGG - chr4_4:78556311-78556330 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + chr4_4:78556348-78556367 Msa0705710:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr4_4:78556411-78556430 Msa0705710:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + chr4_4:78556412-78556431 Msa0705710:intron 15.0%
!!! AAATAACTTATGTTTGAAAT+GGG - chr4_4:78556571-78556590 None:intergenic 15.0%
!! AAAATAACTTATGTTTGAAA+TGG - chr4_4:78556572-78556591 None:intergenic 15.0%
!! TTAAAATTAACGAAAGAAAA+TGG - chr4_4:78556613-78556632 None:intergenic 15.0%
!!! TAAAAGAAAGTATAAGATTA+AGG - chr4_4:78557045-78557064 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr4_4:78556411-78556430 Msa0705710:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + chr4_4:78556412-78556431 Msa0705710:intron 15.0%
!! TAGAAAATACAATTATTCTA+TGG + chr4_4:78557992-78558011 Msa0705710:intron 15.0%
!!! TGATAATCTATGTTTTATTT+TGG + chr4_4:78558160-78558179 Msa0705710:intron 15.0%
!!! GATAATCTATGTTTTATTTT+GGG + chr4_4:78558161-78558180 Msa0705710:intron 15.0%
!!! ATAATCTATGTTTTATTTTG+GGG + chr4_4:78558162-78558181 Msa0705710:intron 15.0%
!! TTTATATCTCTTAAGAAAAT+TGG - chr4_4:78558633-78558652 None:intergenic 15.0%
!! ATTGAAAAGAAAAAAAAACA+TGG - chr4_4:78559330-78559349 None:intergenic 15.0%
!! CTGGATATAATCAATAATTA+AGG - chr4_4:78555482-78555501 None:intergenic 20.0%
!!! AAAATTAGGTATTGAAGTTA+TGG - chr4_4:78555888-78555907 None:intergenic 20.0%
!! GAGTTTAATAATACTTTGTT+TGG + chr4_4:78556129-78556148 Msa0705710:intron 20.0%
!!! TAATAATACTTTGTTTGGAA+AGG + chr4_4:78556134-78556153 Msa0705710:intron 20.0%
!! CAAAATTGTGTCAATTAAAT+TGG - chr4_4:78556312-78556331 None:intergenic 20.0%
!! GAAAGTGAAATATATTGTAT+TGG + chr4_4:78556370-78556389 Msa0705710:intron 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + chr4_4:78556444-78556463 Msa0705710:intron 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG + chr4_4:78556445-78556464 Msa0705710:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + chr4_4:78556481-78556500 Msa0705710:intron 20.0%
!! GATTTGTATTTCAAACAAAT+AGG - chr4_4:78556642-78556661 None:intergenic 20.0%
!! AAATACAAATCAACTTCAAT+GGG + chr4_4:78556651-78556670 Msa0705710:intron 20.0%
!!! AGGTTTTGTATTCTAAATTA+TGG + chr4_4:78556991-78557010 Msa0705710:intron 20.0%
!! AGAATTTATAGAGAAAACAA+AGG - chr4_4:78557234-78557253 None:intergenic 20.0%
!!! TTGTTTTCTCTATAAATTCT+AGG + chr4_4:78557234-78557253 Msa0705710:intron 20.0%
!!! TGTTTTCTCTATAAATTCTA+GGG + chr4_4:78557235-78557254 Msa0705710:intron 20.0%
!!! TAAGAAAAGTGTATAAATGA+AGG + chr4_4:78557423-78557442 Msa0705710:intron 20.0%
!!! AAGAAAAGTGTATAAATGAA+GGG + chr4_4:78557424-78557443 Msa0705710:intron 20.0%
!! AAAGTGGAATATATTGTATT+GGG + chr4_4:78557448-78557467 Msa0705710:intron 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + chr4_4:78556444-78556463 Msa0705710:intron 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG + chr4_4:78556445-78556464 Msa0705710:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + chr4_4:78556481-78556500 Msa0705710:intron 20.0%
!! TATTCTATGGAAATTCATAA+TGG + chr4_4:78558005-78558024 Msa0705710:intron 20.0%
!!! TAGCTTAATTTTTAGAAACA+TGG + chr4_4:78558472-78558491 Msa0705710:intron 20.0%
!!! ACATTTAATTCTGGAAAATA+GGG - chr4_4:78558545-78558564 None:intergenic 20.0%
!!! TACATTTAATTCTGGAAAAT+AGG - chr4_4:78558546-78558565 None:intergenic 20.0%
!! AAAATGTTTCAAGAATTGTA+TGG + chr4_4:78558711-78558730 Msa0705710:intron 20.0%
!!! TATTTTCTTGTTTTCCTTAT+TGG + chr4_4:78559076-78559095 Msa0705710:intron 20.0%
!! TGAATATGTAAATGAGAAAT+AGG + chr4_4:78559502-78559521 Msa0705710:intron 20.0%
!! GTTTCAATATAGTAGTAATA+AGG - chr4_4:78559710-78559729 None:intergenic 20.0%
!! TTTATAGTATGCTAATATGA+AGG - chr4_4:78559942-78559961 None:intergenic 20.0%
!! TACAAAATAATAGTATAAGC+AGG + chr4_4:78560012-78560031 Msa0705710:intron 20.0%
!!! TTTGATTAGATTTTTCATTC+AGG + chr4_4:78560517-78560536 Msa0705710:intron 20.0%
! TCTGATCTGATTGTATAAAA+AGG - chr4_4:78555420-78555439 None:intergenic 25.0%
!! ATCCAGAAAGAAAATTTGTT+TGG + chr4_4:78555496-78555515 Msa0705710:five_prime_UTR 25.0%
!! TTACATGATGATGATGATTA+AGG - chr4_4:78555708-78555727 None:intergenic 25.0%
! AGAGAAAATTAGATCATACA+AGG - chr4_4:78556171-78556190 None:intergenic 25.0%
! CTACATATTCAATCTACTAT+CGG + chr4_4:78556231-78556250 Msa0705710:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + chr4_4:78556480-78556499 Msa0705710:intron 25.0%
!!! TAGTCTATTTAAGCTTTGTT+TGG - chr4_4:78556540-78556559 None:intergenic 25.0%
! AAGAAAATGGTGATATATTC+TGG - chr4_4:78556600-78556619 None:intergenic 25.0%
! GAAATACAAATCAACTTCAA+TGG + chr4_4:78556650-78556669 Msa0705710:intron 25.0%
! TAAGTAATGTCATCAAAGTA+TGG - chr4_4:78556764-78556783 None:intergenic 25.0%
! TGATGACATTACTTAGTAAT+TGG + chr4_4:78556769-78556788 Msa0705710:intron 25.0%
! GATACATCATAAGAATTACT+TGG + chr4_4:78557114-78557133 Msa0705710:intron 25.0%
!! ATAGATTGGTTGATATAGAT+TGG - chr4_4:78557276-78557295 None:intergenic 25.0%
!! AAAACATGGTTGATATAGAT+TGG - chr4_4:78557290-78557309 None:intergenic 25.0%
! ACACATTATAGGAAAAAACA+TGG - chr4_4:78557304-78557323 None:intergenic 25.0%
!! AGAAAAGTGTATAAATGAAG+GGG + chr4_4:78557425-78557444 Msa0705710:intron 25.0%
! GAAAGTGGAATATATTGTAT+TGG + chr4_4:78557447-78557466 Msa0705710:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + chr4_4:78556480-78556499 Msa0705710:intron 25.0%
! AGAATAAATCAGTCAAAACA+TGG - chr4_4:78557655-78557674 None:intergenic 25.0%
! TGAAGTTTGAACTAAAAACA+AGG - chr4_4:78557685-78557704 None:intergenic 25.0%
!! AAAATGATTTTACCATGCTT+GGG + chr4_4:78557760-78557779 Msa0705710:intron 25.0%
!! AAGCATTTTCAGTCAATATT+TGG - chr4_4:78558290-78558309 None:intergenic 25.0%
! CCATTTAAAGGTAAAAAGAA+AGG - chr4_4:78558320-78558339 None:intergenic 25.0%
!! CCTTTCTTTTTACCTTTAAA+TGG + chr4_4:78558317-78558336 Msa0705710:intron 25.0%
!! TCTTTTTACCTTTAAATGGT+TGG + chr4_4:78558321-78558340 Msa0705710:intron 25.0%
!! CTTTTTACCTTTAAATGGTT+GGG + chr4_4:78558322-78558341 Msa0705710:intron 25.0%
!! TTTTTACCTTTAAATGGTTG+GGG + chr4_4:78558323-78558342 Msa0705710:intron 25.0%
! CTAAAAATTAAGCTAGAATG+TGG - chr4_4:78558467-78558486 None:intergenic 25.0%
!! CATTTAATTCTGGAAAATAG+GGG - chr4_4:78558544-78558563 None:intergenic 25.0%
! TGCTAAGATACATTTAATTC+TGG - chr4_4:78558554-78558573 None:intergenic 25.0%
!!! AAGAGATATAAAAGTATTCC+AGG + chr4_4:78558641-78558660 Msa0705710:intron 25.0%
!!! AGAGATATAAAAGTATTCCA+GGG + chr4_4:78558642-78558661 Msa0705710:intron 25.0%
! TAATGGTTGTACTCATTATT+TGG + chr4_4:78558737-78558756 Msa0705710:intron 25.0%
! AAAATATAATTAGAGCTGTG+TGG - chr4_4:78559062-78559081 None:intergenic 25.0%
! CAATATAGTAGTAATAAGGA+TGG - chr4_4:78559706-78559725 None:intergenic 25.0%
! TTGACATATACATGTCTAAT+AGG + chr4_4:78559779-78559798 Msa0705710:intron 25.0%
!!! GAAGTTCTGTTTTTTCAAAA+TGG + chr4_4:78560048-78560067 Msa0705710:intron 25.0%
! TAGTGTGCTAATTATGAAAA+AGG + chr4_4:78560140-78560159 Msa0705710:intron 25.0%
! CATAATTATCAAAGCAAAGA+TGG + chr4_4:78560423-78560442 Msa0705710:intron 25.0%
! TCCTTATGTAAAAACAACAT+TGG - chr4_4:78560565-78560584 None:intergenic 25.0%
! AGCTAATCTTCAATTAACAA+CGG + chr4_4:78560636-78560655 Msa0705710:CDS 25.0%
!! TTTTGCTAGTTGTTTAATAC+TGG - chr4_4:78560683-78560702 None:intergenic 25.0%
! GCTCTTCATACAAAATATTT+GGG - chr4_4:78560834-78560853 None:intergenic 25.0%
!!! TTTTGATTTTCAACATCACA+AGG - chr4_4:78560905-78560924 None:intergenic 25.0%
!!! AAAATTTTGATGCTAGATAC+AGG - chr4_4:78560994-78561013 None:intergenic 25.0%
! AAAAGTGAAGTTCTTATTCA+GGG - chr4_4:78561106-78561125 None:intergenic 25.0%
ATCATCATCATGTAAACAAG+TGG + chr4_4:78555713-78555732 Msa0705710:CDS 30.0%
TGGAAGAATCAGAGAAATAA+AGG + chr4_4:78555733-78555752 Msa0705710:CDS 30.0%
! AAAGGTGTGAAGAAATGTTT+AGG + chr4_4:78555751-78555770 Msa0705710:CDS 30.0%
AGTTCAGTTCAGACAAAATT+AGG - chr4_4:78555902-78555921 None:intergenic 30.0%
ATCGTGATTCTAACAATAAC+AGG + chr4_4:78555933-78555952 Msa0705710:intron 30.0%
TTGAGTAAAATTAGTGGTTG+AGG - chr4_4:78556209-78556228 None:intergenic 30.0%
! GTAGTGTTGAGTAAAATTAG+TGG - chr4_4:78556215-78556234 None:intergenic 30.0%
TTGTGTCAATTAAATTGGGA+CGG - chr4_4:78556307-78556326 None:intergenic 30.0%
! TTGAAATGGGTCAGTTATTT+TGG + chr4_4:78556458-78556477 Msa0705710:intron 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG + chr4_4:78556459-78556478 Msa0705710:intron 30.0%
TTGAAAAAGACCAACTTAAC+TGG + chr4_4:78556710-78556729 Msa0705710:intron 30.0%
TTTAGACAGAATTACTCCAT+AGG + chr4_4:78557017-78557036 Msa0705710:intron 30.0%
GTATAAGATTAAGGAACCTA+TGG - chr4_4:78557036-78557055 None:intergenic 30.0%
TATGATGTATCATGTATTGC+TGG - chr4_4:78557105-78557124 None:intergenic 30.0%
AAAAAGAACAAGGAATCACT+AGG - chr4_4:78557188-78557207 None:intergenic 30.0%
GTGAAAGAATTGTTAGAAAC+TGG - chr4_4:78557336-78557355 None:intergenic 30.0%
! TTGAAATGGGTCAGTTATTT+TGG + chr4_4:78556458-78556477 Msa0705710:intron 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG + chr4_4:78556459-78556478 Msa0705710:intron 30.0%
ACAGTGATGATATAACATCA+AGG + chr4_4:78557618-78557637 Msa0705710:intron 30.0%
! CAAAATGATTTTACCATGCT+TGG + chr4_4:78557759-78557778 Msa0705710:intron 30.0%
CAATAAGCATGCAAAAATGT+GGG - chr4_4:78558033-78558052 None:intergenic 30.0%
ACAATAAGCATGCAAAAATG+TGG - chr4_4:78558034-78558053 None:intergenic 30.0%
! ACATTTTTGCATGCTTATTG+TGG + chr4_4:78558033-78558052 Msa0705710:intron 30.0%
!!! ATCTATGTTTTATTTTGGGG+AGG + chr4_4:78558165-78558184 Msa0705710:intron 30.0%
!!! TCTATGTTTTATTTTGGGGA+GGG + chr4_4:78558166-78558185 Msa0705710:intron 30.0%
AGAACAAAATAGTTTCCGAT+AGG - chr4_4:78558242-78558261 None:intergenic 30.0%
! GAAACTATTTTGTTCTCTGT+TGG + chr4_4:78558246-78558265 Msa0705710:intron 30.0%
! TTTGTTCTCTGTTGGAATTT+TGG + chr4_4:78558254-78558273 Msa0705710:intron 30.0%
CAAGAATTGTATGGAACTAA+TGG + chr4_4:78558720-78558739 Msa0705710:intron 30.0%
TCTTATTCGATTTCACATTC+AGG + chr4_4:78558769-78558788 Msa0705710:intron 30.0%
CAAACTTATAGCTTACTTGA+TGG - chr4_4:78559039-78559058 None:intergenic 30.0%
GAAATAGCAGAAAACTGAAA+AGG + chr4_4:78559125-78559144 Msa0705710:intron 30.0%
AAAAAAAACATGGATGCCAT+GGG - chr4_4:78559320-78559339 None:intergenic 30.0%
AAAAAAAAACATGGATGCCA+TGG - chr4_4:78559321-78559340 None:intergenic 30.0%
TAGAGTTGAATCAAAGATCA+GGG - chr4_4:78559414-78559433 None:intergenic 30.0%
TTAGAGTTGAATCAAAGATC+AGG - chr4_4:78559415-78559434 None:intergenic 30.0%
!! AATAGTTTGCTGAAAGATCT+TGG + chr4_4:78559471-78559490 Msa0705710:intron 30.0%
AGGAAGATATTGAAGAACAA+AGG + chr4_4:78559522-78559541 Msa0705710:intron 30.0%
ATTGAAGAACAAAGGAACAA+TGG + chr4_4:78559530-78559549 Msa0705710:intron 30.0%
GATGCACTAACAAATACATA+TGG + chr4_4:78559734-78559753 Msa0705710:intron 30.0%
TACATATGGCCCTAATTATT+TGG + chr4_4:78559748-78559767 Msa0705710:intron 30.0%
ACATATGGCCCTAATTATTT+GGG + chr4_4:78559749-78559768 Msa0705710:intron 30.0%
TATGCTAATATGAAGGAGTT+TGG - chr4_4:78559935-78559954 None:intergenic 30.0%
TAACTTCAATTTAATGGCTC+AGG + chr4_4:78560201-78560220 Msa0705710:intron 30.0%
AATTAAGTTTGTAACTGTGC+TGG - chr4_4:78560486-78560505 None:intergenic 30.0%
!!! GCCAATGTTGTTTTTACATA+AGG + chr4_4:78560561-78560580 Msa0705710:intron 30.0%
! GTTAATTGAAGATTAGCTAG+TGG - chr4_4:78560634-78560653 None:intergenic 30.0%
GCTAATCTTCAATTAACAAC+GGG + chr4_4:78560637-78560656 Msa0705710:CDS 30.0%
AACTAGCAAAAGACTTATGT+GGG + chr4_4:78560692-78560711 Msa0705710:CDS 30.0%
GGCTCTTCATACAAAATATT+TGG - chr4_4:78560835-78560854 None:intergenic 30.0%
!!! GCTTGCTTAATCTTTTTTGT+TGG - chr4_4:78560856-78560875 None:intergenic 30.0%
TCAAAACATGCCATTATCTA+TGG + chr4_4:78560919-78560938 Msa0705710:three_prime_UTR 30.0%
CAAAAGTGAAGTTCTTATTC+AGG - chr4_4:78561107-78561126 None:intergenic 30.0%
! CGCCAAACAAATTTTCTTTC+TGG - chr4_4:78555501-78555520 None:intergenic 35.0%
TTGATTTCCCTGTTATACCA+CGG - chr4_4:78555678-78555697 None:intergenic 35.0%
TGACTCAATTGCTGAATAGA+GGG - chr4_4:78555805-78555824 None:intergenic 35.0%
ATGACTCAATTGCTGAATAG+AGG - chr4_4:78555806-78555825 None:intergenic 35.0%
TTATTCAGTTGCTCCATCTA+TGG + chr4_4:78555837-78555856 Msa0705710:CDS 35.0%
TATTCAGTTGCTCCATCTAT+GGG + chr4_4:78555838-78555857 Msa0705710:CDS 35.0%
!! GGAACTCTAAAATGTGATTC+TGG - chr4_4:78555967-78555986 None:intergenic 35.0%
TTGAAGTGAGCTTCATTTGT+TGG - chr4_4:78556008-78556027 None:intergenic 35.0%
ACAAATGAAGCTCACTTCAA+AGG + chr4_4:78556008-78556027 Msa0705710:CDS 35.0%
AGAAAATGGGTCAGTTATTC+CGG + chr4_4:78556494-78556513 Msa0705710:intron 35.0%
!!! AGTTGGTCTTTTTCAAAGAC+TGG - chr4_4:78556706-78556725 None:intergenic 35.0%
CATATGAAATAGCTGAAGGA+AGG - chr4_4:78556967-78556986 None:intergenic 35.0%
CTCACATATGAAATAGCTGA+AGG - chr4_4:78556971-78556990 None:intergenic 35.0%
! TCAGCTATTTCATATGTGAG+AGG + chr4_4:78556971-78556990 Msa0705710:intron 35.0%
AAGAATTGGACAGAATAGTG+GGG - chr4_4:78557070-78557089 None:intergenic 35.0%
CAAGAATTGGACAGAATAGT+GGG - chr4_4:78557071-78557090 None:intergenic 35.0%
TCAAGAATTGGACAGAATAG+TGG - chr4_4:78557072-78557091 None:intergenic 35.0%
ATAGCAGACGAAAAAGAACA+AGG - chr4_4:78557198-78557217 None:intergenic 35.0%
!! TTGTTCTTTTTCGTCTGCTA+TGG + chr4_4:78557197-78557216 Msa0705710:intron 35.0%
!! TGTTCTTTTTCGTCTGCTAT+GGG + chr4_4:78557198-78557217 Msa0705710:intron 35.0%
! GGTTCAGAAGTACACATTAT+AGG - chr4_4:78557315-78557334 None:intergenic 35.0%
CAAAGTAGGTCAATTATACC+GGG - chr4_4:78557388-78557407 None:intergenic 35.0%
CCAAAGTAGGTCAATTATAC+CGG - chr4_4:78557389-78557408 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG - chr4_4:78557402-78557421 None:intergenic 35.0%
TGTATAAATGAAGGGGAAAG+TGG + chr4_4:78557432-78557451 Msa0705710:intron 35.0%
AGAAAATGGGTCTGTTATTC+CGG + chr4_4:78557571-78557590 Msa0705710:intron 35.0%
AACTTCACATCACTAACTGT+TGG + chr4_4:78557698-78557717 Msa0705710:intron 35.0%
!! ACTTATTGTCGTTGATGGTT+CGG + chr4_4:78557855-78557874 Msa0705710:CDS 35.0%
CATGCTTATTGTGGTATTCA+TGG + chr4_4:78558042-78558061 Msa0705710:intron 35.0%
CATAGATTATCACCAAGAGA+TGG - chr4_4:78558152-78558171 None:intergenic 35.0%
!!! CTATGTTTTATTTTGGGGAG+GGG + chr4_4:78558167-78558186 Msa0705710:intron 35.0%
TCTTATAGTGATGTGCCTAT+CGG + chr4_4:78558224-78558243 Msa0705710:intron 35.0%
TACCAAAAGCTTAGGCTATT+AGG - chr4_4:78558674-78558693 None:intergenic 35.0%
! AATAGCCTAAGCTTTTGGTA+TGG + chr4_4:78558674-78558693 Msa0705710:intron 35.0%
CTTATCAATGCAAAACCAGT+GGG - chr4_4:78558824-78558843 None:intergenic 35.0%
TCTTATCAATGCAAAACCAG+TGG - chr4_4:78558825-78558844 None:intergenic 35.0%
!! CTTCTGCATTTTTGGAAATG+TGG + chr4_4:78558883-78558902 Msa0705710:CDS 35.0%
! ATTGACTTTGATGTTCACCA+CGG + chr4_4:78558959-78558978 Msa0705710:CDS 35.0%
AAGGAAAGGAAAAATACGTC+TGG - chr4_4:78559016-78559035 None:intergenic 35.0%
CTTATAGCTTACTTGATGGA+AGG - chr4_4:78559035-78559054 None:intergenic 35.0%
GGCTATTACAAACACCAATA+AGG - chr4_4:78559093-78559112 None:intergenic 35.0%
AAACTGAAAAGGAAAAACCC+TGG + chr4_4:78559136-78559155 Msa0705710:intron 35.0%
AACTGAAAAGGAAAAACCCT+GGG + chr4_4:78559137-78559156 Msa0705710:intron 35.0%
!! AGAGAAATGCTTTGAGTTGA+GGG - chr4_4:78559195-78559214 None:intergenic 35.0%
AGAAAAGTGAGGATATAGAG+GGG - chr4_4:78559228-78559247 None:intergenic 35.0%
GAGAAAAGTGAGGATATAGA+GGG - chr4_4:78559229-78559248 None:intergenic 35.0%
!! TCTATATCCTCACTTTTCTC+CGG + chr4_4:78559229-78559248 Msa0705710:intron 35.0%
AGAGTTGAATCAAAGATCAG+GGG - chr4_4:78559413-78559432 None:intergenic 35.0%
ATATATGTCAATTGCCTTGC+TGG - chr4_4:78559570-78559589 None:intergenic 35.0%
!! GGTTGGTTAATTTGTTCAGT+TGG - chr4_4:78559613-78559632 None:intergenic 35.0%
GAACAAATTAACCAACCTCT+AGG + chr4_4:78559616-78559635 Msa0705710:intron 35.0%
ATTCTCTAATTCCTAGAGGT+TGG - chr4_4:78559630-78559649 None:intergenic 35.0%
CTAGATTCTCTAATTCCTAG+AGG - chr4_4:78559634-78559653 None:intergenic 35.0%
!! TTTGTTCATGTGGTTTGGTT+GGG - chr4_4:78559662-78559681 None:intergenic 35.0%
TAATAGTATAAGCAGGCACA+TGG + chr4_4:78560019-78560038 Msa0705710:intron 35.0%
!! TTTTTCAAAATGGTCCCTTG+AGG + chr4_4:78560058-78560077 Msa0705710:intron 35.0%
! TTTTCAAAATGGTCCCTTGA+GGG + chr4_4:78560059-78560078 Msa0705710:intron 35.0%
TTCAATTTAATGGCTCAGGA+TGG + chr4_4:78560205-78560224 Msa0705710:intron 35.0%
AGGAAGAGGAAGATTTAATG+TGG - chr4_4:78560287-78560306 None:intergenic 35.0%
ACATTAAATCTTCCTCTTCC+TGG + chr4_4:78560286-78560305 Msa0705710:CDS 35.0%
!! ACATCATTCTTGTTTCTGCT+GGG + chr4_4:78560383-78560402 Msa0705710:CDS 35.0%
TTCATGTGATTTCGTTTGTC+AGG + chr4_4:78560587-78560606 Msa0705710:intron 35.0%
ATTTCGTTTGTCAGGTATGA+TGG + chr4_4:78560595-78560614 Msa0705710:intron 35.0%
CAACTAGCAAAAGACTTATG+TGG + chr4_4:78560691-78560710 Msa0705710:CDS 35.0%
ACTAGCAAAAGACTTATGTG+GGG + chr4_4:78560693-78560712 Msa0705710:CDS 35.0%
! CGATGTGTATTTTTCTTGGA+AGG + chr4_4:78560718-78560737 Msa0705710:CDS 35.0%
! TGTGTATTTTTCTTGGAAGG+AGG + chr4_4:78560721-78560740 Msa0705710:CDS 35.0%
CAAGTCTCTTTCATATTCAG+TGG + chr4_4:78560753-78560772 Msa0705710:CDS 35.0%
AGATTAAGCAAGCAATTCAG+AGG + chr4_4:78560863-78560882 Msa0705710:CDS 35.0%
TAATGTCTATATCCCTTGTG+TGG + chr4_4:78561023-78561042 Msa0705710:three_prime_UTR 35.0%
ATGACCCAAAATTGTGCTTG+TGG + chr4_4:78555646-78555665 Msa0705710:CDS 40.0%
! CACACCACAAGCACAATTTT+GGG - chr4_4:78555653-78555672 None:intergenic 40.0%
TTCAGCAATTGAGTCATGCT+CGG + chr4_4:78555809-78555828 Msa0705710:CDS 40.0%
ATTGTGCAGAAACCTGATTG+TGG - chr4_4:78555864-78555883 None:intergenic 40.0%
! AGTGAGCTTCATTTGTTGGA+GGG - chr4_4:78556004-78556023 None:intergenic 40.0%
! AAGTGAGCTTCATTTGTTGG+AGG - chr4_4:78556005-78556024 None:intergenic 40.0%
GATAGTCGATGAGCTTATAG+CGG - chr4_4:78556273-78556292 None:intergenic 40.0%
TGTCAATTAAATTGGGACGG+AGG - chr4_4:78556304-78556323 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG + chr4_4:78556495-78556514 Msa0705710:intron 40.0%
AATGGGCAATCTGTGATCAT+AGG + chr4_4:78556668-78556687 Msa0705710:intron 40.0%
CACATAGAGTCCAGTTAAGT+TGG - chr4_4:78556723-78556742 None:intergenic 40.0%
TTATGCATGATTCAGTTCCG+TGG + chr4_4:78556827-78556846 Msa0705710:intron 40.0%
ATGCACACTTGCAATGTCAT+CGG - chr4_4:78556894-78556913 None:intergenic 40.0%
ATGCAAGAGCCTATGTTTCT+GGG + chr4_4:78556912-78556931 Msa0705710:CDS 40.0%
!! CTTTTCAAGCCCAGAAACAT+AGG - chr4_4:78556924-78556943 None:intergenic 40.0%
!! CTATGTTTCTGGGCTTGAAA+AGG + chr4_4:78556922-78556941 Msa0705710:CDS 40.0%
! GGAAGTACAGCATCAAGAAT+TGG - chr4_4:78557084-78557103 None:intergenic 40.0%
GAAAAATAGCAGTGACAGAG+AGG + chr4_4:78557147-78557166 Msa0705710:intron 40.0%
TCACTAGGTATTTGAGAGTC+TGG - chr4_4:78557173-78557192 None:intergenic 40.0%
CCGGTATAATTGACCTACTT+TGG + chr4_4:78557386-78557405 Msa0705710:intron 40.0%
GAAAATGGGTCTGTTATTCC+GGG + chr4_4:78557572-78557591 Msa0705710:intron 40.0%
GATGATATAACATCAAGGCG+AGG + chr4_4:78557623-78557642 Msa0705710:intron 40.0%
ACATCACTAACTGTTGGCAT+AGG + chr4_4:78557704-78557723 Msa0705710:intron 40.0%
GGCATAGGTTTCGATACTTA+TGG + chr4_4:78557719-78557738 Msa0705710:intron 40.0%
TCCTGAACCTTTACAGGTTA+TGG + chr4_4:78557813-78557832 Msa0705710:intron 40.0%
TCCATAACCTGTAAAGGTTC+AGG - chr4_4:78557817-78557836 None:intergenic 40.0%
GCTTGATCCATAACCTGTAA+AGG - chr4_4:78557823-78557842 None:intergenic 40.0%
ACAGGTTATGGATCAAGCTT+TGG + chr4_4:78557825-78557844 Msa0705710:intron 40.0%
!! TATGGATCAAGCTTTGGAGA+AGG + chr4_4:78557831-78557850 Msa0705710:CDS 40.0%
!! ATGGATCAAGCTTTGGAGAA+GGG + chr4_4:78557832-78557851 Msa0705710:CDS 40.0%
AAGGGACTTATTGTCGTTGA+TGG + chr4_4:78557850-78557869 Msa0705710:CDS 40.0%
!! CTTATTGTCGTTGATGGTTC+GGG + chr4_4:78557856-78557875 Msa0705710:CDS 40.0%
ACAGTGGAAGTAGCATATGT+TGG - chr4_4:78557883-78557902 None:intergenic 40.0%
CTTGAGCATAGTACTTACAG+TGG - chr4_4:78557899-78557918 None:intergenic 40.0%
!! ATTAGCCTTAGTTGACTCAG+TGG + chr4_4:78558105-78558124 Msa0705710:CDS 40.0%
TTTAAATGGTTGGGGACAGT+GGG + chr4_4:78558331-78558350 Msa0705710:intron 40.0%
TAAGTGCCTCTATAAGCAAG+TGG + chr4_4:78558497-78558516 Msa0705710:intron 40.0%
TCTTGACCACTTGCTTATAG+AGG - chr4_4:78558506-78558525 None:intergenic 40.0%
TGTATCTTAGCACAAGCTGA+AGG + chr4_4:78558562-78558581 Msa0705710:intron 40.0%
CAAAAGCTTAGGCTATTAGG+TGG - chr4_4:78558671-78558690 None:intergenic 40.0%
! CACCTAATAGCCTAAGCTTT+TGG + chr4_4:78558669-78558688 Msa0705710:intron 40.0%
ACCAACCATACCAAAAGCTT+AGG - chr4_4:78558682-78558701 None:intergenic 40.0%
ATAATGAAAGATCCACCCAC+TGG + chr4_4:78558806-78558825 Msa0705710:CDS 40.0%
! TTTGCATTGATAAGACCACC+AGG + chr4_4:78558830-78558849 Msa0705710:CDS 40.0%
TTGACTTTGATGTTCACCAC+GGG + chr4_4:78558960-78558979 Msa0705710:CDS 40.0%
AGCTTACTTGATGGAAGGAA+AGG - chr4_4:78559030-78559049 None:intergenic 40.0%
!!! TGCTATTTCGCTTTTGCGAA+TGG - chr4_4:78559114-78559133 None:intergenic 40.0%
!! GAGAGAAATGCTTTGAGTTG+AGG - chr4_4:78559196-78559215 None:intergenic 40.0%
AGGATATAGAGGGGAAGAAT+GGG - chr4_4:78559219-78559238 None:intergenic 40.0%
GGAGAAAAGTGAGGATATAG+AGG - chr4_4:78559230-78559249 None:intergenic 40.0%
CAGAAGTTAGTGGGAAAGAA+GGG - chr4_4:78559261-78559280 None:intergenic 40.0%
! GCAAGCTCAGCATTTTGTTA+AGG + chr4_4:78559280-78559299 Msa0705710:intron 40.0%
AGTTGAATCAAAGATCAGGG+GGG - chr4_4:78559411-78559430 None:intergenic 40.0%
GAGTTGAATCAAAGATCAGG+GGG - chr4_4:78559412-78559431 None:intergenic 40.0%
AGAACAAAGGAACAATGGCT+TGG + chr4_4:78559535-78559554 Msa0705710:intron 40.0%
!! GTTTGTTCATGTGGTTTGGT+TGG - chr4_4:78559663-78559682 None:intergenic 40.0%
GGTTGTTTGTTCATGTGGTT+TGG - chr4_4:78559667-78559686 None:intergenic 40.0%
!! CAATGGGTTGTTTGTTCATG+TGG - chr4_4:78559672-78559691 None:intergenic 40.0%
GATGGCAGATGTAAGTCAAT+GGG - chr4_4:78559688-78559707 None:intergenic 40.0%
AGCACGTGCCCAAATAATTA+GGG - chr4_4:78559760-78559779 None:intergenic 40.0%
AAGCACGTGCCCAAATAATT+AGG - chr4_4:78559761-78559780 None:intergenic 40.0%
TGCATGAATGTTCTCCTGTA+GGG - chr4_4:78559825-78559844 None:intergenic 40.0%
!! ATATGAAGGAGTTTGGTGCA+AGG - chr4_4:78559928-78559947 None:intergenic 40.0%
TTTCAAAATGGTCCCTTGAG+GGG + chr4_4:78560060-78560079 Msa0705710:intron 40.0%
TTAAATCTTCCTCTTCCTGG+AGG + chr4_4:78560289-78560308 Msa0705710:CDS 40.0%
GGCTTAAATCTTTGAGCACA+AGG - chr4_4:78560361-78560380 None:intergenic 40.0%
GCAGAAACAAGAATGATGTC+TGG - chr4_4:78560382-78560401 None:intergenic 40.0%
!! GACATCATTCTTGTTTCTGC+TGG + chr4_4:78560382-78560401 Msa0705710:CDS 40.0%
! TAGCTAGTGGATCTAACACA+TGG - chr4_4:78560621-78560640 None:intergenic 40.0%
CTAGCAAAAGACTTATGTGG+GGG + chr4_4:78560694-78560713 Msa0705710:CDS 40.0%
! GGGACGATGTGTATTTTTCT+TGG + chr4_4:78560714-78560733 Msa0705710:CDS 40.0%
ACACATTTCGTGCTCTTCTT+GGG + chr4_4:78560779-78560798 Msa0705710:CDS 40.0%
TACTTGCCTAATGGTTGAGA+CGG - chr4_4:78560945-78560964 None:intergenic 40.0%
! CAAGTAAAGCGCTTGCTTAA+TGG + chr4_4:78560959-78560978 Msa0705710:three_prime_UTR 40.0%
CCTTCTTCTATGGGACAAAT+GGG - chr4_4:78561056-78561075 None:intergenic 40.0%
!! GATGGATTGCCTTCTTCTAT+GGG - chr4_4:78561065-78561084 None:intergenic 40.0%
TCCATCGTACAAGATTGTTG+TGG + chr4_4:78561079-78561098 Msa0705710:three_prime_UTR 40.0%
ACCACAACAATCTTGTACGA+TGG - chr4_4:78561083-78561102 None:intergenic 40.0%
! AAATTTGTTTGGCGCTGCTG+CGG + chr4_4:78555507-78555526 Msa0705710:five_prime_UTR 45.0%
! CCACACCACAAGCACAATTT+TGG - chr4_4:78555654-78555673 None:intergenic 45.0%
CCAAAATTGTGCTTGTGGTG+TGG + chr4_4:78555651-78555670 Msa0705710:CDS 45.0%
GTTCAATGACATCAGAGCCA+CGG - chr4_4:78556847-78556866 None:intergenic 45.0%
CATGCAAGAGCCTATGTTTC+TGG + chr4_4:78556911-78556930 Msa0705710:CDS 45.0%
GTAGGTCAATTATACCGGGA+CGG - chr4_4:78557384-78557403 None:intergenic 45.0%
CAGAACAAGAATCCCAAGCA+TGG - chr4_4:78557775-78557794 None:intergenic 45.0%
TTCCTCTCCTGAACCTTTAC+AGG + chr4_4:78557807-78557826 Msa0705710:intron 45.0%
AACCTGTAAAGGTTCAGGAG+AGG - chr4_4:78557812-78557831 None:intergenic 45.0%
TCTTCAGACACTCTGAGCTT+GGG - chr4_4:78557936-78557955 None:intergenic 45.0%
TTCTTCAGACACTCTGAGCT+TGG - chr4_4:78557937-78557956 None:intergenic 45.0%
!! TGCTACTATTGACTCCTGGA+AGG - chr4_4:78558074-78558093 None:intergenic 45.0%
GATCACCACTGAGTCAACTA+AGG - chr4_4:78558113-78558132 None:intergenic 45.0%
CACTGTCCCCAACCATTTAA+AGG - chr4_4:78558332-78558351 None:intergenic 45.0%
CTTTAAATGGTTGGGGACAG+TGG + chr4_4:78558330-78558349 Msa0705710:intron 45.0%
TTAAATGGTTGGGGACAGTG+GGG + chr4_4:78558332-78558351 Msa0705710:intron 45.0%
CATAGGACGCTTGCAAAATG+GGG - chr4_4:78558398-78558417 None:intergenic 45.0%
GCATAGGACGCTTGCAAAAT+GGG - chr4_4:78558399-78558418 None:intergenic 45.0%
TGCATAGGACGCTTGCAAAA+TGG - chr4_4:78558400-78558419 None:intergenic 45.0%
! TCCTATGCATTCTGAGTTGG+TGG + chr4_4:78558411-78558430 Msa0705710:intron 45.0%
TCCACCAACTCAGAATGCAT+AGG - chr4_4:78558415-78558434 None:intergenic 45.0%
TGTCTAGTCTCAATCCCAGA+CGG + chr4_4:78558595-78558614 Msa0705710:intron 45.0%
AAGCTTAGGCTATTAGGTGG+AGG - chr4_4:78558668-78558687 None:intergenic 45.0%
! GCCTAAGCTTTTGGTATGGT+TGG + chr4_4:78558678-78558697 Msa0705710:intron 45.0%
ATCAATGCAAAACCAGTGGG+TGG - chr4_4:78558821-78558840 None:intergenic 45.0%
GCCATTCCAAAAGGACCTAT+GGG + chr4_4:78558860-78558879 Msa0705710:CDS 45.0%
CCAAAAATGCAGAAGCCCAT+AGG - chr4_4:78558878-78558897 None:intergenic 45.0%
! CCTATGGGCTTCTGCATTTT+TGG + chr4_4:78558875-78558894 Msa0705710:CDS 45.0%
TTTGATGTTCACCACGGGAA+TGG + chr4_4:78558965-78558984 Msa0705710:CDS 45.0%
CATCATTTGTTCCATTCCCG+TGG - chr4_4:78558979-78558998 None:intergenic 45.0%
AAAACCCTGGGATCTTTGAG+AGG + chr4_4:78559149-78559168 Msa0705710:intron 45.0%
GGATATAGAGGGGAAGAATG+GGG - chr4_4:78559218-78559237 None:intergenic 45.0%
GAGGATATAGAGGGGAAGAA+TGG - chr4_4:78559220-78559239 None:intergenic 45.0%
GCAGAAGTTAGTGGGAAAGA+AGG - chr4_4:78559262-78559281 None:intergenic 45.0%
CTGAGCTTGCAGAAGTTAGT+GGG - chr4_4:78559270-78559289 None:intergenic 45.0%
AAACATGGATGCCATGGGTT+TGG - chr4_4:78559315-78559334 None:intergenic 45.0%
CTTGGTTGTAACTTCCAGCA+AGG + chr4_4:78559553-78559572 Msa0705710:intron 45.0%
GGATGGCAGATGTAAGTCAA+TGG - chr4_4:78559689-78559708 None:intergenic 45.0%
GTAGGGAGGCTAATGTTAGA+AGG - chr4_4:78559808-78559827 None:intergenic 45.0%
! TCTAACATTAGCCTCCCTAC+AGG + chr4_4:78559808-78559827 Msa0705710:intron 45.0%
ATGAATGTTCTCCTGTAGGG+AGG - chr4_4:78559822-78559841 None:intergenic 45.0%
CTGCATGAATGTTCTCCTGT+AGG - chr4_4:78559826-78559845 None:intergenic 45.0%
CAGGAGAACATTCATGCAGT+CGG + chr4_4:78559827-78559846 Msa0705710:intron 45.0%
!! AAGGAGTTTGGTGCAAGGAT+TGG - chr4_4:78559923-78559942 None:intergenic 45.0%
ATGTGCAAGTGCAAACAGAG+TGG - chr4_4:78559985-78560004 None:intergenic 45.0%
ATAAGCAGGCACATGGCATT+TGG + chr4_4:78560026-78560045 Msa0705710:intron 45.0%
TTCAAAATGGTCCCTTGAGG+GGG + chr4_4:78560061-78560080 Msa0705710:intron 45.0%
GACACATTTCGTGCTCTTCT+TGG + chr4_4:78560778-78560797 Msa0705710:CDS 45.0%
CACATTTCGTGCTCTTCTTG+GGG + chr4_4:78560780-78560799 Msa0705710:CDS 45.0%
TCTTCTTGGGGACAAAAGCT+TGG + chr4_4:78560792-78560811 Msa0705710:CDS 45.0%
GTTGAGACGGCCATAGATAA+TGG - chr4_4:78560932-78560951 None:intergenic 45.0%
CAAGCGCTTTACTTGCCTAA+TGG - chr4_4:78560954-78560973 None:intergenic 45.0%
CCCATTTGTCCCATAGAAGA+AGG + chr4_4:78561053-78561072 Msa0705710:three_prime_UTR 45.0%
GCCTTCTTCTATGGGACAAA+TGG - chr4_4:78561057-78561076 None:intergenic 45.0%
!! CGATGGATTGCCTTCTTCTA+TGG - chr4_4:78561066-78561085 None:intergenic 45.0%
!! ATAAAAATAAAAAATTATTG+TGG - chr4_4:78556811-78556830 None:intergenic 5.0%
TATGAGGAGGAGGAAGAAGG+AGG - chr4_4:78555582-78555601 None:intergenic 50.0%
CCTTCTTCCTCCTCCTCATA+CGG + chr4_4:78555582-78555601 Msa0705710:five_prime_UTR 50.0%
!! AGAGAGAGTACCGTATGAGG+AGG - chr4_4:78555595-78555614 None:intergenic 50.0%
!! GAGAGAGAGAGTACCGTATG+AGG - chr4_4:78555598-78555617 None:intergenic 50.0%
GTGTGGACCGTGGTATAACA+GGG + chr4_4:78555668-78555687 Msa0705710:CDS 50.0%
TCCATCTATGGGCCACAATC+AGG + chr4_4:78555849-78555868 Msa0705710:CDS 50.0%
ACCTGATTGTGGCCCATAGA+TGG - chr4_4:78555853-78555872 None:intergenic 50.0%
TGGAGGGAAGTGAGAATTGC+AGG - chr4_4:78555988-78556007 None:intergenic 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + chr4_4:78556499-78556518 Msa0705710:intron 50.0%
!! AAAAAGTACTCCCTCCGTCC+CGG - chr4_4:78556516-78556535 None:intergenic 50.0%
GCAATGTCATCGGTAGAAGC+AGG - chr4_4:78556884-78556903 None:intergenic 50.0%
GTTAATTACTCCCTCCGTCC+CGG + chr4_4:78557367-78557386 Msa0705710:intron 50.0%
GTCAATTATACCGGGACGGA+GGG - chr4_4:78557380-78557399 None:intergenic 50.0%
ATGGGTCTGTTATTCCGGGA+CGG + chr4_4:78557576-78557595 Msa0705710:intron 50.0%
AAATCATACTCCCTCCGTCC+CGG - chr4_4:78557593-78557612 None:intergenic 50.0%
ATTCATGGTGCAGACCTTCC+AGG + chr4_4:78558057-78558076 Msa0705710:intron 50.0%
!! CAGCTGCTACTATTGACTCC+TGG - chr4_4:78558078-78558097 None:intergenic 50.0%
CAGGAGTCAATAGTAGCAGC+TGG + chr4_4:78558076-78558095 Msa0705710:CDS 50.0%
TCAATAGTAGCAGCTGGTGC+TGG + chr4_4:78558082-78558101 Msa0705710:CDS 50.0%
TCAGTGGTGATCTCTCAACC+TGG + chr4_4:78558121-78558140 Msa0705710:intron 50.0%
AACCTGGCATGTCCATCTCT+TGG + chr4_4:78558137-78558156 Msa0705710:intron 50.0%
GAGGGGTAAGTGAGTGGATA+TGG + chr4_4:78558184-78558203 Msa0705710:intron 50.0%
TAAATGGTTGGGGACAGTGG+GGG + chr4_4:78558333-78558352 Msa0705710:intron 50.0%
GCGTCCTATGCATTCTGAGT+TGG + chr4_4:78558408-78558427 Msa0705710:intron 50.0%
TCTGGAAAATAGGGGCAGCA+AGG - chr4_4:78558536-78558555 None:intergenic 50.0%
GGATCACACAAAAGCCGTCT+GGG - chr4_4:78558612-78558631 None:intergenic 50.0%
TGGATCACACAAAAGCCGTC+TGG - chr4_4:78558613-78558632 None:intergenic 50.0%
! TTTGGAATGGCGTGATGTCC+TGG - chr4_4:78558851-78558870 None:intergenic 50.0%
GGACATCACGCCATTCCAAA+AGG + chr4_4:78558851-78558870 Msa0705710:CDS 50.0%
CGCCATTCCAAAAGGACCTA+TGG + chr4_4:78558859-78558878 Msa0705710:CDS 50.0%
!! GCCCATAGGTCCTTTTGGAA+TGG - chr4_4:78558864-78558883 None:intergenic 50.0%
! CAGAAGCCCATAGGTCCTTT+TGG - chr4_4:78558869-78558888 None:intergenic 50.0%
CAGACCTCTCAAAGATCCCA+GGG - chr4_4:78559156-78559175 None:intergenic 50.0%
ACAGACCTCTCAAAGATCCC+AGG - chr4_4:78559157-78559176 None:intergenic 50.0%
GAGTTCTCCGGAGAAAAGTG+AGG - chr4_4:78559239-78559258 None:intergenic 50.0%
TGGGAAAGAAGGGAGTTCTC+CGG - chr4_4:78559251-78559270 None:intergenic 50.0%
GCTGAGCTTGCAGAAGTTAG+TGG - chr4_4:78559271-78559290 None:intergenic 50.0%
GGCTCAAACATCCAAACCCA+TGG + chr4_4:78559301-78559320 Msa0705710:intron 50.0%
!! TCATGTGGTTTGGTTGGGAG+AGG - chr4_4:78559657-78559676 None:intergenic 50.0%
AAGTGCAAACAGAGTGGAGG+GGG - chr4_4:78559979-78559998 None:intergenic 50.0%
CAAGTGCAAACAGAGTGGAG+GGG - chr4_4:78559980-78559999 None:intergenic 50.0%
GCAAGTGCAAACAGAGTGGA+GGG - chr4_4:78559981-78560000 None:intergenic 50.0%
TGCAAGTGCAAACAGAGTGG+AGG - chr4_4:78559982-78560001 None:intergenic 50.0%
GATGGAAGCTATCCAGGTAC+CGG + chr4_4:78560223-78560242 Msa0705710:CDS 50.0%
TCGTCAAATTTGCCGGTACC+TGG - chr4_4:78560238-78560257 None:intergenic 50.0%
!! AGGTACCGGCAAATTTGACG+AGG + chr4_4:78560237-78560256 Msa0705710:CDS 50.0%
TACCGGCAAATTTGACGAGG+TGG + chr4_4:78560240-78560259 Msa0705710:CDS 50.0%
ACCGGCAAATTTGACGAGGT+GGG + chr4_4:78560241-78560260 Msa0705710:CDS 50.0%
ACCCACCTCGTCAAATTTGC+CGG - chr4_4:78560245-78560264 None:intergenic 50.0%
AAATTTGACGAGGTGGGTGC+TGG + chr4_4:78560247-78560266 Msa0705710:CDS 50.0%
AATTTGACGAGGTGGGTGCT+GGG + chr4_4:78560248-78560267 Msa0705710:CDS 50.0%
CTATGGCCGTCTCAACCATT+AGG + chr4_4:78560936-78560955 Msa0705710:three_prime_UTR 50.0%
CTATGGGACAAATGGGACGA+TGG - chr4_4:78561049-78561068 None:intergenic 50.0%
AAGAAGGAGGAGAGCGAGGA+AGG - chr4_4:78555569-78555588 None:intergenic 55.0%
CCGTATGAGGAGGAGGAAGA+AGG - chr4_4:78555585-78555604 None:intergenic 55.0%
!! GAGAGTACCGTATGAGGAGG+AGG - chr4_4:78555592-78555611 None:intergenic 55.0%
GGTGTGGACCGTGGTATAAC+AGG + chr4_4:78555667-78555686 Msa0705710:CDS 55.0%
GTCAGTTATTCCGGGACGGA+GGG + chr4_4:78556503-78556522 Msa0705710:intron 55.0%
GGTCAATTATACCGGGACGG+AGG - chr4_4:78557381-78557400 None:intergenic 55.0%
GTCTGTTATTCCGGGACGGA+GGG + chr4_4:78557580-78557599 Msa0705710:intron 55.0%
CACCAAGAGATGGACATGCC+AGG - chr4_4:78558142-78558161 None:intergenic 55.0%
TTTGGGGAGGGGTAAGTGAG+TGG + chr4_4:78558178-78558197 Msa0705710:intron 55.0%
CTGAGCATGACGAGCTGCAA+TGG - chr4_4:78558909-78558928 None:intergenic 55.0%
CGTCATGCTCAGCGTGTTCA+TGG + chr4_4:78558917-78558936 Msa0705710:CDS 55.0%
AAAATGGTCCCTTGAGGGGG+AGG + chr4_4:78560064-78560083 Msa0705710:intron 55.0%
AAATGGTCCCTTGAGGGGGA+GGG + chr4_4:78560065-78560084 Msa0705710:intron 55.0%
! AGGGGGCTTGGTAATTGGGT+GGG + chr4_4:78560084-78560103 Msa0705710:intron 55.0%
! GCTTGGTAATTGGGTGGGGA+AGG + chr4_4:78560089-78560108 Msa0705710:intron 55.0%
GCTCAGGATGGAAGCTATCC+AGG + chr4_4:78560217-78560236 Msa0705710:intron 55.0%
! ATTTGACGAGGTGGGTGCTG+GGG + chr4_4:78560249-78560268 Msa0705710:CDS 55.0%
CTTCCTCTTCCTGGAGGTTC+AGG + chr4_4:78560295-78560314 Msa0705710:CDS 55.0%
TCACCTGAACCTCCAGGAAG+AGG - chr4_4:78560301-78560320 None:intergenic 55.0%
GCAGTATCACCTGAACCTCC+AGG - chr4_4:78560307-78560326 None:intergenic 55.0%
ATGGGACGATGGCCACACAA+GGG - chr4_4:78561038-78561057 None:intergenic 55.0%
AATGGGACGATGGCCACACA+AGG - chr4_4:78561039-78561058 None:intergenic 55.0%
! AAGGTAGGAGGGGAGGTGCA+TGG - chr4_4:78555550-78555569 None:intergenic 60.0%
GAGAGCGAGGAAGGTAGGAG+GGG - chr4_4:78555560-78555579 None:intergenic 60.0%
GGAGAGCGAGGAAGGTAGGA+GGG - chr4_4:78555561-78555580 None:intergenic 60.0%
AGGAGAGCGAGGAAGGTAGG+AGG - chr4_4:78555562-78555581 None:intergenic 60.0%
AGGAGGAGAGCGAGGAAGGT+AGG - chr4_4:78555565-78555584 None:intergenic 60.0%
GAGGAAGAAGGAGGAGAGCG+AGG - chr4_4:78555573-78555592 None:intergenic 60.0%
TGTGCTTGTGGTGTGGACCG+TGG + chr4_4:78555658-78555677 Msa0705710:CDS 60.0%
GGTCAGTTATTCCGGGACGG+AGG + chr4_4:78556502-78556521 Msa0705710:intron 60.0%
GGTCTGTTATTCCGGGACGG+AGG + chr4_4:78557579-78557598 Msa0705710:intron 60.0%
AGGCTATTAGGTGGAGGCCC+TGG - chr4_4:78558662-78558681 None:intergenic 60.0%
GGAATGGCGTGATGTCCTGG+TGG - chr4_4:78558848-78558867 None:intergenic 60.0%
AATGGTCCCTTGAGGGGGAG+GGG + chr4_4:78560066-78560085 Msa0705710:intron 60.0%
! GGGGAGGGGGCTTGGTAATT+GGG + chr4_4:78560080-78560099 Msa0705710:intron 60.0%
! GAGGGGGCTTGGTAATTGGG+TGG + chr4_4:78560083-78560102 Msa0705710:intron 60.0%
! GGGGGCTTGGTAATTGGGTG+GGG + chr4_4:78560085-78560104 Msa0705710:intron 60.0%
AGCGAGGAAGGTAGGAGGGG+AGG - chr4_4:78555557-78555576 None:intergenic 65.0%
ATGGTCCCTTGAGGGGGAGG+GGG + chr4_4:78560067-78560086 Msa0705710:intron 65.0%
! GGGGGAGGGGGCTTGGTAAT+TGG + chr4_4:78560079-78560098 Msa0705710:intron 65.0%
!! GTGGGTGCTGGGGATGGTGA+AGG + chr4_4:78560259-78560278 Msa0705710:CDS 65.0%
CCAAGCCCCCTCCCCCTCAA+GGG - chr4_4:78560075-78560094 None:intergenic 70.0%
ACCAAGCCCCCTCCCCCTCA+AGG - chr4_4:78560076-78560095 None:intergenic 70.0%
!! GACGAGGTGGGTGCTGGGGA+TGG + chr4_4:78560253-78560272 Msa0705710:CDS 70.0%
CCCTTGAGGGGGAGGGGGCT+TGG + chr4_4:78560072-78560091 Msa0705710:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 78555411 78561175 78555411 ID=Msa0705710;Name=Msa0705710
chr4_4 mRNA 78555411 78561175 78555411 ID=Msa0705710-mRNA-1;Parent=Msa0705710;Name=Msa0705710-mRNA-1;_AED=0.16;_eAED=0.16;_QI=235|1|1|1|1|1|8|266|421
chr4_4 exon 78555411 78555870 78555411 ID=Msa0705710-mRNA-1:exon:25077;Parent=Msa0705710-mRNA-1
chr4_4 exon 78555955 78556029 78555955 ID=Msa0705710-mRNA-1:exon:25078;Parent=Msa0705710-mRNA-1
chr4_4 exon 78556842 78556943 78556842 ID=Msa0705710-mRNA-1:exon:25079;Parent=Msa0705710-mRNA-1
chr4_4 exon 78557829 78557900 78557829 ID=Msa0705710-mRNA-1:exon:25080;Parent=Msa0705710-mRNA-1
chr4_4 exon 78558070 78558126 78558070 ID=Msa0705710-mRNA-1:exon:25081;Parent=Msa0705710-mRNA-1
chr4_4 exon 78558791 78559042 78558791 ID=Msa0705710-mRNA-1:exon:25082;Parent=Msa0705710-mRNA-1
chr4_4 exon 78560223 78560404 78560223 ID=Msa0705710-mRNA-1:exon:25083;Parent=Msa0705710-mRNA-1
chr4_4 exon 78560609 78561175 78560609 ID=Msa0705710-mRNA-1:exon:25084;Parent=Msa0705710-mRNA-1
chr4_4 five_prime_UTR 78555411 78555645 78555411 ID=Msa0705710-mRNA-1:five_prime_utr;Parent=Msa0705710-mRNA-1
chr4_4 CDS 78555646 78555870 78555646 ID=Msa0705710-mRNA-1:cds;Parent=Msa0705710-mRNA-1
chr4_4 CDS 78555955 78556029 78555955 ID=Msa0705710-mRNA-1:cds;Parent=Msa0705710-mRNA-1
chr4_4 CDS 78556842 78556943 78556842 ID=Msa0705710-mRNA-1:cds;Parent=Msa0705710-mRNA-1
chr4_4 CDS 78557829 78557900 78557829 ID=Msa0705710-mRNA-1:cds;Parent=Msa0705710-mRNA-1
chr4_4 CDS 78558070 78558126 78558070 ID=Msa0705710-mRNA-1:cds;Parent=Msa0705710-mRNA-1
chr4_4 CDS 78558791 78559042 78558791 ID=Msa0705710-mRNA-1:cds;Parent=Msa0705710-mRNA-1
chr4_4 CDS 78560223 78560404 78560223 ID=Msa0705710-mRNA-1:cds;Parent=Msa0705710-mRNA-1
chr4_4 CDS 78560609 78560909 78560609 ID=Msa0705710-mRNA-1:cds;Parent=Msa0705710-mRNA-1
chr4_4 three_prime_UTR 78560910 78561175 78560910 ID=Msa0705710-mRNA-1:three_prime_utr;Parent=Msa0705710-mRNA-1
Gene Sequence

>Msa0705710

ATGACCCAAAATTGTGCTTGTGGTGTGGACCGTGGTATAACAGGGAAATCAATCTTTCTCCTTAATCATCATCATCATGTAAACAAGTGGAAGAATCAGAGAAATAAAGGTGTGAAGAAATGTTTAGGAGCGTCTATACACTGTTCAAGCGATGTTCCCTCTATTCAGCAATTGAGTCATGCTCGGCTTATTTATTCAGTTGCTCCATCTATGGGCCACAATCAGGAGTCTCATCCAGAATCACATTTTAGAGTTCCTGCAATTCTCACTTCCCTCCAACAAATGAAGCTCACTTCAAAGTTCCGTGGCTCTGATGTCATTGAACTTCAAAATTTTGAGCCTGCTTCTACCGATGACATTGCAAGTGTGCATGCAAGAGCCTATGTTTCTGGGCTTGAAAAGGTTATGGATCAAGCTTTGGAGAAGGGACTTATTGTCGTTGATGGTTCGGGACCAACATATGCTACTTCCACTACCTTCCAGGAGTCAATAGTAGCAGCTGGTGCTGGATTAGCCTTAGTTGACTCAGTGGTTGCAGCTTCAAAGATAATGAAAGATCCACCCACTGGTTTTGCATTGATAAGACCACCAGGACATCACGCCATTCCAAAAGGACCTATGGGCTTCTGCATTTTTGGAAATGTGGCCATTGCAGCTCGTCATGCTCAGCGTGTTCATGGACTGAAGCGCGTGTTTATCATTGACTTTGATGTTCACCACGGGAATGGAACAAATGATGCTTTCTACGATGATCCAGACGTATTTTTCCTTTCCTTCCATCAAGATGGAAGCTATCCAGGTACCGGCAAATTTGACGAGGTGGGTGCTGGGGATGGTGAAGGAACCACATTAAATCTTCCTCTTCCTGGAGGTTCAGGTGATACTGCTATTAGATCTGTGTTCGATGAAGTTGTTGTACCTTGTGCTCAAAGATTTAAGCCAGACATCATTCTTGTTTCTGCTGGGTATGATGGCCATGTGTTAGATCCACTAGCTAATCTTCAATTAACAACGGGAACATATTACATGCTTGCGTCCAGTATTAAACAACTAGCAAAAGACTTATGTGGGGGACGATGTGTATTTTTCTTGGAAGGAGGATATAATCTCAAGTCTCTTTCATATTCAGTGGCAGACACATTTCGTGCTCTTCTTGGGGACAAAAGCTTGGCATCTGAGTTTGATAACCCAAATATTTTGTATGAAGAGCCAACAAAAAAGATTAAGCAAGCAATTCAGAGGATAAAATGTGTTCATTCCTTGTGA

Protein sequence

>Msa0705710

MTQNCACGVDRGITGKSIFLLNHHHHVNKWKNQRNKGVKKCLGASIHCSSDVPSIQQLSHARLIYSVAPSMGHNQESHPESHFRVPAILTSLQQMKLTSKFRGSDVIELQNFEPASTDDIASVHARAYVSGLEKVMDQALEKGLIVVDGSGPTYATSTTFQESIVAAGAGLALVDSVVAASKIMKDPPTGFALIRPPGHHAIPKGPMGFCIFGNVAIAARHAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDVFFLSFHQDGSYPGTGKFDEVGAGDGEGTTLNLPLPGGSGDTAIRSVFDEVVVPCAQRFKPDIILVSAGYDGHVLDPLANLQLTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADTFRALLGDKSLASEFDNPNILYEEPTKKIKQAIQRIKCVHSL*