AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0866310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0866310 MtrunA17_Chr5g0422391 98.195 997 18 0 1 997 1 997 0.0 1984
Msa0866310 MtrunA17_Chr1g0198861 66.371 1014 288 18 1 996 1 979 0.0 1184
Msa0866310 MtrunA17_Chr1g0151531 52.500 360 148 3 621 977 407 746 4.53e-114 369
Msa0866310 MtrunA17_Chr1g0151531 37.712 236 84 6 126 361 128 300 8.20e-29 124
Msa0866310 MtrunA17_Chr4g0045981 57.353 272 110 3 715 984 346 613 1.35e-98 323
Msa0866310 MtrunA17_Chr4g0069431 46.565 262 140 0 718 979 296 557 4.50e-80 272
Msa0866310 MtrunA17_Chr5g0430701 43.382 272 147 4 707 976 151 417 1.96e-67 233
Msa0866310 MtrunA17_Chr8g0340991 37.280 397 233 6 108 493 121 512 2.56e-60 217
Msa0866310 MtrunA17_Chr2g0330791 33.761 468 273 11 1 453 13 458 4.10e-60 215
Msa0866310 MtrunA17_Chr2g0307341 32.599 454 252 13 110 548 33 447 1.22e-41 161
Msa0866310 MtrunA17_Chr1g0179671 25.781 256 180 3 125 375 98 348 3.48e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0866310 AT3G25690.1 69.921 1014 242 15 1 981 1 984 0.0 1234
Msa0866310 AT3G25690.2 69.921 1014 242 15 1 981 1 984 0.0 1234
Msa0866310 AT3G25690.6 69.921 1014 242 15 1 981 1 984 0.0 1234
Msa0866310 AT3G25690.4 69.921 1014 242 15 1 981 1 984 0.0 1234
Msa0866310 AT3G25690.5 70.238 1008 237 16 7 981 9 986 0.0 1225
Msa0866310 AT3G25690.3 66.132 499 133 9 191 675 53 529 0.0 568
Msa0866310 AT4G18570.1 56.429 280 105 4 715 984 352 624 2.51e-93 310
Msa0866310 AT1G48280.1 46.415 265 142 0 715 979 278 542 1.28e-81 276
Msa0866310 AT1G07120.1 47.529 263 129 5 716 976 128 383 2.01e-71 243
Msa0866310 AT1G52080.2 33.394 548 293 15 1 502 13 534 1.30e-63 226
Msa0866310 AT1G52080.1 33.394 548 293 15 1 502 13 534 1.30e-63 226
Msa0866310 AT4G18570.2 53.846 208 81 3 715 912 352 554 2.25e-62 223
Msa0866310 AT1G07120.2 45.729 199 103 3 716 912 128 323 1.00e-48 176

Find 254 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCCCATTTCTTCAATTTC+TGG 0.106112 5_4:-67860334 None:intergenic
AATTTCACATCTATATTTAT+AGG 0.137988 5_4:-67863401 None:intergenic
TTGCTTAAACAACAAGTTTC+TGG 0.139596 5_4:+67859134 Msa0866310:CDS
ATTTGAAGGAATGCATAATT+TGG 0.162253 5_4:+67858206 Msa0866310:five_prime_UTR
CCCTAGCCATGGCCAATTTA+TGG 0.175617 5_4:-67860685 None:intergenic
AATATAGATGTGAAATTTAA+AGG 0.198079 5_4:+67863407 Msa0866310:three_prime_UTR
CTCCGCTTGCAGAGAATTAA+TGG 0.200637 5_4:-67858979 None:intergenic
TGATGAGTATTCTATGTTTC+TGG 0.205149 5_4:-67863074 None:intergenic
ATTTCACGGTACAGAGAATT+TGG 0.209559 5_4:+67862163 Msa0866310:CDS
TTGCCTTCGCTTGTGATTTC+GGG 0.216812 5_4:-67860145 None:intergenic
CTTGAGGGGCTTGAGGGGTT+TGG 0.222362 5_4:-67863028 None:intergenic
TTTGCCTTCGCTTGTGATTT+CGG 0.223108 5_4:-67860146 None:intergenic
CTAGCAGTATTAGGAGTTTC+AGG 0.254443 5_4:-67860539 None:intergenic
GAATCTTGTAGCCAGTTTAT+TGG 0.264027 5_4:-67862190 None:intergenic
GTTGAAGGAATAATCAGTTT+TGG 0.265958 5_4:+67858151 Msa0866310:five_prime_UTR
AAAGCAAGAGTTCAGAAGTT+TGG 0.275073 5_4:+67860734 Msa0866310:CDS
AGCAACTTCACATGAGAGTT+TGG 0.283106 5_4:-67861907 None:intergenic
TTTCAGGCAGTTCTCCAAAA+AGG 0.293704 5_4:+67860402 Msa0866310:CDS
GATAAAAGGTCTTCAAATTC+TGG 0.297145 5_4:-67858702 None:intergenic
ATAAACTGGCTACAAGATTC+TGG 0.304894 5_4:+67862193 Msa0866310:CDS
AATCTTGTAGCCAGTTTATT+GGG 0.305182 5_4:-67862189 None:intergenic
ATATCAAGATCTGATGAAAT+TGG 0.306706 5_4:+67861854 Msa0866310:CDS
AGACCAGCACTAGCAGTATT+AGG 0.325676 5_4:-67860548 None:intergenic
GGCAAACTTTATCTTGCTAA+TGG 0.330666 5_4:-67860906 None:intergenic
CACCAACTTGAGGGGCTTGA+GGG 0.334010 5_4:-67863034 None:intergenic
GTATAAAGATCGCCATAAAT+TGG 0.334328 5_4:+67860673 Msa0866310:CDS
TCTGAACTTGATGCATTATC+TGG 0.340915 5_4:+67862566 Msa0866310:CDS
AAGCAAGAGTTCAGAAGTTT+GGG 0.342986 5_4:+67860735 Msa0866310:CDS
GCAGATGGTATTCCATTTGC+AGG 0.343966 5_4:-67861010 None:intergenic
ACTCAATCTCTCCAGATAAA+AGG 0.348637 5_4:-67858716 None:intergenic
AAGAACACTAGAATCATCTT+TGG 0.349582 5_4:-67860360 None:intergenic
GAAAGCTGTGAATGATTTAG+AGG 0.350300 5_4:+67859214 Msa0866310:CDS
TAATCCAGAAATTGAAGAAA+TGG 0.351637 5_4:+67860330 Msa0866310:CDS
TTGTCAAAATCTTCACTTCC+TGG 0.354802 5_4:-67860251 None:intergenic
ACCTAAACTTTCTAAAATAA+AGG 0.354901 5_4:+67860817 Msa0866310:CDS
GAGATTGAGTTATCATTTCC+TGG 0.357651 5_4:+67858729 Msa0866310:CDS
TTAGGTGGCAAAGATATATT+AGG 0.357928 5_4:-67860800 None:intergenic
TACTATCATGAAGCTTCTTT+AGG 0.358982 5_4:-67858241 None:intergenic
TGAGTATGAGTGTTAAATCT+AGG 0.365473 5_4:+67860426 Msa0866310:CDS
TCTCTAGCTGGTTCCTTCTC+AGG 0.365817 5_4:-67862590 None:intergenic
AGTGCATCTGCTTTACCTTC+AGG 0.366034 5_4:-67861813 None:intergenic
CCTGCTTTCATCACTGTTGA+AGG 0.369661 5_4:+67858136 Msa0866310:five_prime_UTR
GGAGGAAGAAGAGGAGAAAG+AGG 0.375017 5_4:+67858620 Msa0866310:CDS
ATCAATCTTGTTCCCCTAGC+TGG 0.376302 5_4:+67857799 Msa0866310:five_prime_UTR
ACCTGGTTGCCTTTGTGAAC+TGG 0.376411 5_4:+67861517 Msa0866310:CDS
ATCAAGTGACTCACTAAATT+CGG 0.378484 5_4:+67860583 Msa0866310:CDS
AGGTCTATCTCTTTCGATCT+TGG 0.378644 5_4:-67860780 None:intergenic
GGAGAATTGCTTGAGTACTA+TGG 0.381095 5_4:+67858873 Msa0866310:CDS
CTACAAGATTCTGGAGTTGT+AGG 0.385109 5_4:+67862202 Msa0866310:CDS
GTGATGAAACAGAATCCATT+TGG 0.386047 5_4:-67858113 None:intergenic
AATCCAGAAATTGAAGAAAT+GGG 0.386976 5_4:+67860331 Msa0866310:CDS
TTTATCAATCATTGATGAAA+CGG 0.394020 5_4:+67861182 Msa0866310:CDS
TTTCTTTAAATGATATTTGA+AGG 0.398349 5_4:+67858192 Msa0866310:five_prime_UTR
CTGTCTTGAAGCACTTTGAT+TGG 0.399397 5_4:+67861790 Msa0866310:CDS
GAACCACCACCTGATGGTTT+AGG 0.405766 5_4:-67860968 None:intergenic
CTGATGACTTGGACATCAAA+TGG 0.411116 5_4:-67860619 None:intergenic
TTGCTGTTGTGGAGCTTAAG+AGG 0.412288 5_4:+67859237 Msa0866310:CDS
TTTGAACTAGCATGAACAAT+TGG 0.413777 5_4:-67860845 None:intergenic
GAGTCTGACCTCTGTCATAT+TGG 0.414337 5_4:-67859339 None:intergenic
AGATGAAGAACTTTCCTTCC+TGG 0.419668 5_4:+67861542 Msa0866310:CDS
GCAACTTCACATGAGAGTTT+GGG 0.419767 5_4:-67861906 None:intergenic
TTATCAATCATTGATGAAAC+GGG 0.420903 5_4:+67861183 Msa0866310:CDS
TTTATCAGAAAGATAGATCA+TGG 0.425184 5_4:+67863375 Msa0866310:three_prime_UTR
GGTCTTCATTTGCGTGTCTC+AGG 0.427743 5_4:-67859965 None:intergenic
GGTCCACCTGGTGGAGGAGG+AGG 0.431071 5_4:-67861073 None:intergenic
CGCTTGAAAGCTTGATGATA+AGG 0.432388 5_4:+67860453 Msa0866310:CDS
TCATTATTAGTTTCTTCAAC+GGG 0.432976 5_4:+67861226 Msa0866310:CDS
AGTGAAGGAATTGGAGGAAA+GGG 0.434864 5_4:+67858836 Msa0866310:CDS
TCACCAACTTGAGGGGCTTG+AGG 0.435017 5_4:-67863035 None:intergenic
CCACCTGGTGGACGAGGAGG+AGG 0.435071 5_4:-67861049 None:intergenic
GTTGGCTAGAAACAAGATAA+AGG 0.435240 5_4:+67859058 Msa0866310:CDS
ATAGTCTTCCTGAGGGTGCC+TGG 0.437629 5_4:-67860094 None:intergenic
AGTAGCATTCACAATATAAT+CGG 0.438059 5_4:-67863221 None:intergenic
CTTGGAAGAGGTGGTGGAGG+AGG 0.438572 5_4:-67861097 None:intergenic
GATGGTTTAGGAGGTGGCCT+TGG 0.439613 5_4:-67860956 None:intergenic
GGAAGAGGTGGTGGAGGAGG+CGG 0.443722 5_4:-67861094 None:intergenic
TGGAAGGACTTCAAATGAAT+CGG 0.444993 5_4:+67860000 Msa0866310:CDS
TCTTCACTTCCTGGTGAAGA+AGG 0.445084 5_4:-67860242 None:intergenic
AATTTGGAATCCCAATAAAC+TGG 0.445616 5_4:+67862179 Msa0866310:CDS
GCTTGAGTACTATGGTTTGA+AGG 0.449241 5_4:+67858881 Msa0866310:CDS
GCTCAGAACTTGGTGAAGAA+AGG 0.450039 5_4:+67858424 Msa0866310:intron
GTCCTTCCACTTGCTTCGAC+AGG 0.450079 5_4:-67859986 None:intergenic
GGCGGTCCACCTGGTGGAGG+AGG 0.451744 5_4:-67861076 None:intergenic
CCTGGTGGACGAGGAGGAGG+AGG 0.452241 5_4:-67861046 None:intergenic
CCTCCTCCTCCTCGTCCACC+AGG 0.453292 5_4:+67861046 Msa0866310:CDS
GGTGGAGGAGGAGGTCCACC+TGG 0.456329 5_4:-67861064 None:intergenic
AAAGAAGCTTCATGATAGTA+AGG 0.457627 5_4:+67858244 Msa0866310:exon
TCGCTTGTGATTTCGGGCTA+AGG 0.462063 5_4:-67860139 None:intergenic
TTTCAATTTCTTGTCAATCT+CGG 0.462137 5_4:-67859195 None:intergenic
CCCTTGACCTCGTTCCGATC+CGG 0.464671 5_4:-67860189 None:intergenic
TTTGATAGGCCTCTTGGAAG+AGG 0.466831 5_4:-67861109 None:intergenic
CACTTCCTGGTGAAGAAGGA+TGG 0.468336 5_4:-67860238 None:intergenic
GGTGGACGAGGAGGAGGAGG+AGG 0.475864 5_4:-67861043 None:intergenic
TATCTTCTTCACCAACTTGA+GGG 0.477737 5_4:-67863043 None:intergenic
GTTGGGTCAATGCATGTTTG+AGG 0.480052 5_4:+67860054 Msa0866310:CDS
GTAGGTAGTGATGATGATCT+TGG 0.480147 5_4:-67863251 None:intergenic
GGTGGAGGAGGCGGTCCACC+TGG 0.480997 5_4:-67861085 None:intergenic
AGTGTAGCAATCACCACCTT+TGG 0.482526 5_4:+67860488 Msa0866310:CDS
GCCATAAATTGGCCATGGCT+AGG 0.484118 5_4:+67860684 Msa0866310:CDS
AACTTAGTAAAAGCTATGTT+AGG 0.484710 5_4:-67858044 None:intergenic
GGAGGTCCACCTGGTGGACG+AGG 0.485982 5_4:-67861055 None:intergenic
AATGAATTATACAGCTGAAA+GGG 0.486041 5_4:-67863148 None:intergenic
TCTTGGACTGCAGAGTGAAA+TGG 0.487052 5_4:+67859914 Msa0866310:intron
GGAGGCGGTCCACCTGGTGG+AGG 0.487730 5_4:-67861079 None:intergenic
GAAAGGGAAGTGAAACTTGA+AGG 0.490463 5_4:+67858852 Msa0866310:CDS
CTTCTCAGATATTGAAGACC+TGG 0.490941 5_4:+67861500 Msa0866310:CDS
CAGTTAAAACTAACCAGCTA+GGG 0.491494 5_4:-67857812 None:intergenic
CTTCAAGAAGAACTCACAAA+TGG 0.494267 5_4:+67859011 Msa0866310:CDS
CCATAAATTGGCCATGGCTA+GGG 0.494574 5_4:+67860685 Msa0866310:CDS
GGAGGAATGGATGGAGCAGA+TGG 0.495461 5_4:-67861025 None:intergenic
GATGCTAGGAACAACATGAT+TGG 0.496359 5_4:+67861259 Msa0866310:CDS
TGATTTAGAGGTTGCTGTTG+TGG 0.499894 5_4:+67859226 Msa0866310:CDS
ACAAACTCAAATCCTGCAAA+TGG 0.500332 5_4:+67860998 Msa0866310:CDS
TGATGAAACAGAATCCATTT+GGG 0.501425 5_4:-67858112 None:intergenic
ACAGTTAAAACTAACCAGCT+AGG 0.501609 5_4:-67857813 None:intergenic
GAGTATGAGTGTTAAATCTA+GGG 0.503061 5_4:+67860427 Msa0866310:CDS
AGGCCTCTTGGAAGAGGTGG+TGG 0.503884 5_4:-67861103 None:intergenic
GCGTCAGCTAGTGAAGGAAT+TGG 0.504568 5_4:+67858827 Msa0866310:CDS
ACTGTTAAGCAGCTCAATGT+TGG 0.505956 5_4:+67858303 Msa0866310:CDS
CCTTCAACAGTGATGAAAGC+AGG 0.508083 5_4:-67858136 None:intergenic
AGAACTCGTATACCTTCGTT+GGG 0.509500 5_4:+67860037 Msa0866310:CDS
GATGAAACGGGAAGCAAAGA+AGG 0.511061 5_4:+67861195 Msa0866310:CDS
GTTGTTTAAGCAACAAAAGT+TGG 0.511120 5_4:-67859124 None:intergenic
TTCTCCCATCCTTCTTCACC+AGG 0.512217 5_4:+67860233 Msa0866310:CDS
GTACTATGGTTTGAAGGAGC+AGG 0.512565 5_4:+67858887 Msa0866310:CDS
CTTCCAAGAGGCCTATCAAA+AGG 0.513794 5_4:+67861112 Msa0866310:CDS
TTCATTATTAGTTTCTTCAA+CGG 0.514402 5_4:+67861225 Msa0866310:CDS
AAGGTAAAGCAGATGCACTA+AGG 0.515387 5_4:+67861817 Msa0866310:CDS
CTATCTTCTTCACCAACTTG+AGG 0.515694 5_4:-67863044 None:intergenic
AAGAATCACCAGGCACCCTC+AGG 0.516205 5_4:+67860086 Msa0866310:CDS
AAGCACTTTGATTGGCCTGA+AGG 0.517950 5_4:+67861798 Msa0866310:CDS
TACCATTAATTCTCTGCAAG+CGG 0.518242 5_4:+67858977 Msa0866310:CDS
GCAATCACCACCTTTGGTCA+AGG 0.521162 5_4:+67860494 Msa0866310:CDS
ACCAACTTGAGGGGCTTGAG+GGG 0.521386 5_4:-67863033 None:intergenic
GCCGGATCGGAACGAGGTCA+AGG 0.521409 5_4:+67860188 Msa0866310:CDS
ACATTGAGAAAAGGCCTACT+CGG 0.522076 5_4:+67860930 Msa0866310:CDS
CTTGAGGCTAACCAAACAAA+AGG 0.522471 5_4:+67859101 Msa0866310:CDS
GGTGGACCTCCTCCTCCACC+AGG 0.523365 5_4:+67861067 Msa0866310:CDS
AAGAACTCGTATACCTTCGT+TGG 0.526358 5_4:+67860036 Msa0866310:CDS
GAGCTCCGCAACTCTAGATT+CGG 0.529048 5_4:-67859315 None:intergenic
GGAGAGTGATCTAAAAGAAA+AGG 0.532067 5_4:+67860706 Msa0866310:CDS
GCCAGTTCACAAAGGCAACC+AGG 0.533328 5_4:-67861518 None:intergenic
ATTGTTACGAACAAGAGATA+TGG 0.533942 5_4:+67862138 Msa0866310:CDS
AGCTTCATGATAGTAAGGTT+AGG 0.534874 5_4:+67858249 Msa0866310:exon
AGACGCATCAACTGATGACT+TGG 0.535247 5_4:-67860630 None:intergenic
AGGCCACCTCCTAAACCATC+AGG 0.539960 5_4:+67860959 Msa0866310:CDS
CCTCTTGGAAGAGGTGGTGG+AGG 0.541313 5_4:-67861100 None:intergenic
TTGATCCCCTTGACCAAAGG+TGG 0.543107 5_4:-67860501 None:intergenic
AGTTTGCCGACATTGAGAAA+AGG 0.544849 5_4:+67860921 Msa0866310:CDS
CTAAGAAAACATAATCAAGT+AGG 0.544933 5_4:-67863269 None:intergenic
GATAGGCCTCTTGGAAGAGG+TGG 0.550497 5_4:-67861106 None:intergenic
CCACCTGATGGTTTAGGAGG+TGG 0.550943 5_4:-67860962 None:intergenic
GGTGGCCTTGGTACCCGAGT+AGG 0.552272 5_4:-67860944 None:intergenic
ACTTCCTGGTGAAGAAGGAT+GGG 0.552850 5_4:-67860237 None:intergenic
TTCTTGATCCCCTTGACCAA+AGG 0.554015 5_4:-67860504 None:intergenic
CAATCACCACCTTTGGTCAA+GGG 0.554925 5_4:+67860495 Msa0866310:CDS
TGCATTATCTGGACCTGAGA+AGG 0.555945 5_4:+67862577 Msa0866310:CDS
CAAGAGATATGGCTATTTCA+CGG 0.556828 5_4:+67862149 Msa0866310:CDS
CTAGGGGAACAAGATTGATA+AGG 0.558485 5_4:-67857795 None:intergenic
CTTTGATGCAGAGAGCATGA+AGG 0.561581 5_4:+67862980 Msa0866310:CDS
AATGGTTGCAAAGGCAAAAG+AGG 0.562885 5_4:+67859932 Msa0866310:CDS
CAGCTGTATAATTCATTCTG+CGG 0.566200 5_4:+67863154 Msa0866310:three_prime_UTR
CAAAGTTTATGAAATTGAGA+TGG 0.567396 5_4:+67858776 Msa0866310:CDS
GGTGATTGCTACACTATCAC+TGG 0.567705 5_4:-67860480 None:intergenic
TCGGGCTAAGGTTCTTGCTG+AGG 0.567719 5_4:-67860127 None:intergenic
ATCTTCTTCACCAACTTGAG+GGG 0.568553 5_4:-67863042 None:intergenic
AAGTTTAACATACAGCTAAG+AGG 0.569831 5_4:-67861306 None:intergenic
GGAGGAGGCGGTCCACCTGG+TGG 0.571229 5_4:-67861082 None:intergenic
GCGCGCTGATAGTCTTCCTG+AGG 0.571719 5_4:-67860102 None:intergenic
TGAAGACCTGTCGAAGCAAG+TGG 0.572018 5_4:+67859980 Msa0866310:CDS
ACCCCTCAAGCCCCTCAAGT+TGG 0.572221 5_4:+67863032 Msa0866310:CDS
GCAGAGTGAAATGGTTGCAA+AGG 0.573056 5_4:+67859923 Msa0866310:intron
CGGGTAACACATCTGATGCT+AGG 0.574445 5_4:+67861245 Msa0866310:CDS
CAGGTCTTCAATATCTGAGA+AGG 0.575182 5_4:-67861499 None:intergenic
TTTCTTCTGTACAACTAGCA+AGG 0.576094 5_4:+67862522 Msa0866310:CDS
TGAAGAAAATAACGATGAGA+AGG 0.577311 5_4:+67858752 Msa0866310:CDS
TTATGGCGATCTTTATACGC+AGG 0.577520 5_4:-67860668 None:intergenic
CTTATCATCAAGCTTTCAAG+CGG 0.578195 5_4:-67860452 None:intergenic
TGAGGCCACAGAACAAGAGA+AGG 0.579721 5_4:+67858464 Msa0866310:CDS
AGCGACCTTCTCTTGTTCTG+TGG 0.581850 5_4:-67858469 None:intergenic
TCAAATGATCAATCTGAGGA+TGG 0.582360 5_4:+67860863 Msa0866310:CDS
CCACCACCTGATGGTTTAGG+AGG 0.582529 5_4:-67860965 None:intergenic
CCGGATCGGAACGAGGTCAA+GGG 0.583503 5_4:+67860189 Msa0866310:CDS
AATCACCACCTTTGGTCAAG+GGG 0.583931 5_4:+67860496 Msa0866310:CDS
GGACCTCCTCCTCCACCAGG+TGG 0.585473 5_4:+67861070 Msa0866310:CDS
TAGATCACTCTCCCTAGCCA+TGG 0.585978 5_4:-67860696 None:intergenic
GGTCCACCTGGTGGACGAGG+AGG 0.586202 5_4:-67861052 None:intergenic
GTCATCAGTTGATGCGTCTG+TGG 0.587342 5_4:+67860634 Msa0866310:CDS
GAATGAATTATACAGCTGAA+AGG 0.587891 5_4:-67863149 None:intergenic
AGGTAAAGCAGATGCACTAA+GGG 0.590443 5_4:+67861818 Msa0866310:CDS
ACTCCTAATACTGCTAGTGC+TGG 0.594001 5_4:+67860545 Msa0866310:CDS
CCTCCACCACCTCTTCCAAG+AGG 0.596580 5_4:+67861100 Msa0866310:CDS
GTCTTCAATATCTGAGAAGG+AGG 0.596746 5_4:-67861496 None:intergenic
AGAGAGTTCTTGATTCTGCA+AGG 0.596913 5_4:+67862608 Msa0866310:CDS
GGAAGAAGAGGAGAAAGAGG+AGG 0.597529 5_4:+67858623 Msa0866310:CDS
AGAATCAAGAACTCTCTAGC+TGG 0.597894 5_4:-67862602 None:intergenic
TGCGAAGAGAGATCTTGAGT+TGG 0.598167 5_4:+67859040 Msa0866310:CDS
CATTGAGAAAAGGCCTACTC+GGG 0.598950 5_4:+67860931 Msa0866310:CDS
TGATAAAATTCGACTAACTG+TGG 0.601025 5_4:-67861166 None:intergenic
TGCTGCCGAATCTAGAGTTG+CGG 0.601472 5_4:+67859310 Msa0866310:CDS
GACCTGTCGAAGCAAGTGGA+AGG 0.601916 5_4:+67859984 Msa0866310:CDS
TCAGCTAGTGAAGGAATTGG+AGG 0.602487 5_4:+67858830 Msa0866310:CDS
TAAAGCAGATGCACTAAGGG+AGG 0.603377 5_4:+67861821 Msa0866310:CDS
CGCGCTGATAGTCTTCCTGA+GGG 0.603466 5_4:-67860101 None:intergenic
TAGTGAAGGAATTGGAGGAA+AGG 0.604260 5_4:+67858835 Msa0866310:CDS
GAGAAACACATGCACACACA+AGG 0.606533 5_4:-67858080 None:intergenic
AGATCGCCATAAATTGGCCA+TGG 0.608376 5_4:+67860679 Msa0866310:CDS
GATGTTAGAATATGCCGGAT+CGG 0.609797 5_4:+67860175 Msa0866310:CDS
TATGGCGATCTTTATACGCA+GGG 0.609835 5_4:-67860667 None:intergenic
CCTCCTAAACCATCAGGTGG+TGG 0.610139 5_4:+67860965 Msa0866310:CDS
CTTCAACAGTGATGAAAGCA+GGG 0.611532 5_4:-67858135 None:intergenic
CAGCTGATGTTAGAATATGC+CGG 0.612494 5_4:+67860170 Msa0866310:CDS
GAATATGCCGGATCGGAACG+AGG 0.616158 5_4:+67860182 Msa0866310:CDS
GGAGGAGGAGGTCCACCTGG+TGG 0.616417 5_4:-67861061 None:intergenic
CCTCCTCCTCGTCCACCAGG+TGG 0.621777 5_4:+67861049 Msa0866310:CDS
GTCTAAAGATCGTCAAGATG+AGG 0.622394 5_4:+67858446 Msa0866310:CDS
CGGATCGGAACGAGGTCAAG+GGG 0.623381 5_4:+67860190 Msa0866310:CDS
TTCATCTAGCCAGTTCACAA+AGG 0.630833 5_4:-67861526 None:intergenic
GGAGCAGGAATCAGACATTG+TGG 0.630928 5_4:+67858902 Msa0866310:CDS
CTAACAGAACCACCACCTGA+TGG 0.633052 5_4:-67860974 None:intergenic
CTACAAGTGAAAGAAGAGGC+GGG 0.634825 5_4:+67859158 Msa0866310:CDS
ACAAAGACAGATGCAGCTTG+AGG 0.637837 5_4:+67859085 Msa0866310:CDS
ATCCAGAAATTGAAGAAATG+GGG 0.638544 5_4:+67860332 Msa0866310:CDS
ACGATTGCGTCAGCTAGTGA+AGG 0.639024 5_4:+67858821 Msa0866310:CDS
TAAAGGCATGCATACCAGGA+AGG 0.640747 5_4:-67861556 None:intergenic
TAGCCCGAAATCACAAGCGA+AGG 0.642342 5_4:+67860142 Msa0866310:CDS
AGATTCTGGAGTTGTAGGCA+AGG 0.644734 5_4:+67862207 Msa0866310:CDS
AATTACGAACCTGATGAACA+CGG 0.646865 5_4:-67862646 None:intergenic
AAAGGCCTACTCGGGTACCA+AGG 0.646961 5_4:+67860939 Msa0866310:CDS
AGGCCTATCAAAAGGAGCAG+CGG 0.652768 5_4:+67861120 Msa0866310:CDS
AATGTTGGAAATTCAAAACC+AGG 0.654067 5_4:+67858318 Msa0866310:CDS
TCTACAAGTGAAAGAAGAGG+CGG 0.656081 5_4:+67859157 Msa0866310:CDS
GTATGAGCTAAAGAATCACC+AGG 0.658793 5_4:+67860076 Msa0866310:CDS
ATATATGCATAAATATTCAG+TGG 0.660253 5_4:-67858012 None:intergenic
TGGTCTACAAGTGAAAGAAG+AGG 0.663730 5_4:+67859154 Msa0866310:CDS
AGTATGAGTGTTAAATCTAG+GGG 0.665333 5_4:+67860428 Msa0866310:CDS
CAGACATTGTGGAGTTACAA+CGG 0.666939 5_4:+67858913 Msa0866310:CDS
ATTCGACTAACTGTGGAGCA+CGG 0.667267 5_4:-67861159 None:intergenic
GGTTGCAAAGGCAAAAGAGG+AGG 0.667693 5_4:+67859935 Msa0866310:CDS
TGAAATACTAAGATGCTAAG+CGG 0.672534 5_4:-67863330 None:intergenic
ACGGCAGCTGAAAATTAAGA+CGG 0.676456 5_4:+67858932 Msa0866310:CDS
TGATGATAAAGCCAATTGTG+TGG 0.678932 5_4:+67857983 Msa0866310:five_prime_UTR
TAGTTCAAATGATCAATCTG+AGG 0.680104 5_4:+67860859 Msa0866310:CDS
CAGCAGCCACCAATAACTAG+AGG 0.681077 5_4:-67857928 None:intergenic
GCAGCTGAAAATTAAGACGG+TGG 0.682047 5_4:+67858935 Msa0866310:CDS
CCACCTCCTAAACCATCAGG+TGG 0.688030 5_4:+67860962 Msa0866310:CDS
GAGTGATCTAAAAGAAAAGG+CGG 0.689350 5_4:+67860709 Msa0866310:CDS
AGTTAAAACTAACCAGCTAG+GGG 0.689499 5_4:-67857811 None:intergenic
AACATGCATTGACCCAACGA+AGG 0.691991 5_4:-67860049 None:intergenic
ATATACAGAAGCAAATACCA+AGG 0.710861 5_4:-67863121 None:intergenic
GAGTTTGGGATCATCGACGA+AGG 0.715055 5_4:-67861892 None:intergenic
AAAGCTGATGTAGAAACACA+AGG 0.721363 5_4:+67861435 Msa0866310:CDS
GGAGCTCTCCAATATGACAG+AGG 0.741862 5_4:+67859331 Msa0866310:CDS
ATCAGAAAGATAGATCATGG+AGG 0.770420 5_4:+67863378 Msa0866310:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTTTTATTTATAT+TGG + chr5_4:67858361-67858380 Msa0866310:intron 0.0%
!!! TATTTTTTTATTTATATTGG+TGG + chr5_4:67858364-67858383 Msa0866310:intron 10.0%
!! TTTAATGTTAGAAATAAATT+AGG + chr5_4:67858568-67858587 Msa0866310:intron 10.0%
!!! AAATATTTATATCAAAGTTT+TGG + chr5_4:67859464-67859483 Msa0866310:intron 10.0%
!!! TTTTATTATTTTTCTCATTT+TGG + chr5_4:67861337-67861356 Msa0866310:intron 10.0%
!! TATTTATACCATAATATAAA+GGG - chr5_4:67861708-67861727 None:intergenic 10.0%
!! TTTCTTTAAATGATATTTGA+AGG + chr5_4:67858192-67858211 Msa0866310:five_prime_UTR 15.0%
!! TATAGATATGTATCTTTAAA+TGG + chr5_4:67859859-67859878 Msa0866310:intron 15.0%
!! ATAGATATGTATCTTTAAAT+GGG + chr5_4:67859860-67859879 Msa0866310:intron 15.0%
!! GAGAAAAATAATAAAATAGA+TGG - chr5_4:67861333-67861352 None:intergenic 15.0%
!! GTATTTATACCATAATATAA+AGG - chr5_4:67861709-67861728 None:intergenic 15.0%
!! AAGTAAAATGATAAATACTA+TGG - chr5_4:67861987-67862006 None:intergenic 15.0%
!!! AACATATATTTTGTATATAC+TGG - chr5_4:67862404-67862423 None:intergenic 15.0%
!! AATTTCACATCTATATTTAT+AGG - chr5_4:67863404-67863423 None:intergenic 15.0%
!! ATATATGCATAAATATTCAG+TGG - chr5_4:67858015-67858034 None:intergenic 20.0%
!! GTTAGAAATAAATTAGGTAA+AGG + chr5_4:67858574-67858593 Msa0866310:intron 20.0%
!!! AAAGTTGTTTAATTTTTGCA+GGG + chr5_4:67858597-67858616 Msa0866310:intron 20.0%
!! AATTCGAATAGATTTACTAA+AGG - chr5_4:67859733-67859752 None:intergenic 20.0%
!!! TTTATTTTAGAAAGTTTAGG+TGG - chr5_4:67860818-67860837 None:intergenic 20.0%
!!! ACCTAAACTTTCTAAAATAA+AGG + chr5_4:67860817-67860836 Msa0866310:CDS 20.0%
!!! TCCTTTATTTTAGAAAGTTT+AGG - chr5_4:67860821-67860840 None:intergenic 20.0%
!! TTTATCAATCATTGATGAAA+CGG + chr5_4:67861182-67861201 Msa0866310:CDS 20.0%
!!! TTCATTATTAGTTTCTTCAA+CGG + chr5_4:67861225-67861244 Msa0866310:CDS 20.0%
!! TCTCATTAAAATTTCAAACT+TGG + chr5_4:67861678-67861697 Msa0866310:intron 20.0%
!! TTGATTTCCTATGAAATATA+AGG + chr5_4:67861755-67861774 Msa0866310:intron 20.0%
!! AAAATGATAAATACTATGGT+AGG - chr5_4:67861983-67862002 None:intergenic 20.0%
!! AAAAATAGATACACAAAACT+TGG + chr5_4:67862332-67862351 Msa0866310:intron 20.0%
!! CATAAAAGAAATAACAAAAG+TGG - chr5_4:67862676-67862695 None:intergenic 20.0%
!! AGTTCAATGAAATAAGAAAA+AGG + chr5_4:67862717-67862736 Msa0866310:intron 20.0%
!! GTTCAATGAAATAAGAAAAA+GGG + chr5_4:67862718-67862737 Msa0866310:intron 20.0%
!! TTCAATGAAATAAGAAAAAG+GGG + chr5_4:67862719-67862738 Msa0866310:intron 20.0%
!!! TTTTTTCTTTTCTTTTTCCT+TGG + chr5_4:67863104-67863123 Msa0866310:three_prime_UTR 20.0%
!! CAATCCTTTTTGTTCATTTT+TGG + chr5_4:67857905-67857924 Msa0866310:five_prime_UTR 25.0%
! AACTTAGTAAAAGCTATGTT+AGG - chr5_4:67858047-67858066 None:intergenic 25.0%
!! TTGAAGGAATAATCAGTTTT+GGG + chr5_4:67858152-67858171 Msa0866310:five_prime_UTR 25.0%
!!! AATAATCAGTTTTGGGAAAT+GGG + chr5_4:67858159-67858178 Msa0866310:five_prime_UTR 25.0%
! ATTTGAAGGAATGCATAATT+TGG + chr5_4:67858206-67858225 Msa0866310:five_prime_UTR 25.0%
!! TTACAGATGATTCTTTTGAA+AGG + chr5_4:67858496-67858515 Msa0866310:CDS 25.0%
!!! GAAAGTTGTTTAATTTTTGC+AGG + chr5_4:67858596-67858615 Msa0866310:intron 25.0%
!!! AAGTTGTTTAATTTTTGCAG+GGG + chr5_4:67858598-67858617 Msa0866310:intron 25.0%
! CAAAGTTTATGAAATTGAGA+TGG + chr5_4:67858776-67858795 Msa0866310:CDS 25.0%
! TTTCAATTTCTTGTCAATCT+CGG - chr5_4:67859198-67859217 None:intergenic 25.0%
! CAGTTTATTGTCTAAACAAA+GGG - chr5_4:67859506-67859525 None:intergenic 25.0%
! TCAGTTTATTGTCTAAACAA+AGG - chr5_4:67859507-67859526 None:intergenic 25.0%
! TTTCTAAATTGTCATATGCT+TGG - chr5_4:67859707-67859726 None:intergenic 25.0%
!!! ATTTTAAAGAAGCTTTGTCT+TGG + chr5_4:67859897-67859916 Msa0866310:intron 25.0%
! TAATCCAGAAATTGAAGAAA+TGG + chr5_4:67860330-67860349 Msa0866310:CDS 25.0%
! AATCCAGAAATTGAAGAAAT+GGG + chr5_4:67860331-67860350 Msa0866310:CDS 25.0%
! TTATCAATCATTGATGAAAC+GGG + chr5_4:67861183-67861202 Msa0866310:CDS 25.0%
!! TCATTATTAGTTTCTTCAAC+GGG + chr5_4:67861226-67861245 Msa0866310:CDS 25.0%
! CATTTGTGAAACATGTATAT+AGG + chr5_4:67861410-67861429 Msa0866310:intron 25.0%
!! CTAAGCATGAAATAATTTTG+AGG - chr5_4:67861615-67861634 None:intergenic 25.0%
! TTAGTGTAGATTATATGAGA+AGG + chr5_4:67861631-67861650 Msa0866310:intron 25.0%
!!! AATTTTAATGAGAAGAACGA+AGG - chr5_4:67861671-67861690 None:intergenic 25.0%
! TCATCAACCTTATATTTCAT+AGG - chr5_4:67861765-67861784 None:intergenic 25.0%
! ATATCAAGATCTGATGAAAT+TGG + chr5_4:67861854-67861873 Msa0866310:CDS 25.0%
!! CATTTTACTTACCAAGAAAA+TGG + chr5_4:67861997-67862016 Msa0866310:intron 25.0%
! CATGACTTAATATACTGTAT+TGG + chr5_4:67862078-67862097 Msa0866310:intron 25.0%
! TTAACCAATAGAAATACCAT+TGG + chr5_4:67862243-67862262 Msa0866310:intron 25.0%
!! AATGTACATTTGTAATGGAA+AGG - chr5_4:67862822-67862841 None:intergenic 25.0%
! GTTCAAATGTACATTTGTAA+TGG - chr5_4:67862827-67862846 None:intergenic 25.0%
! AATGAATTATACAGCTGAAA+GGG - chr5_4:67863151-67863170 None:intergenic 25.0%
! AGTAGCATTCACAATATAAT+CGG - chr5_4:67863224-67863243 None:intergenic 25.0%
! CTAAGAAAACATAATCAAGT+AGG - chr5_4:67863272-67863291 None:intergenic 25.0%
! TTTATCAGAAAGATAGATCA+TGG + chr5_4:67863375-67863394 Msa0866310:three_prime_UTR 25.0%
TGATGAAACAGAATCCATTT+GGG - chr5_4:67858115-67858134 None:intergenic 30.0%
! GTTGAAGGAATAATCAGTTT+TGG + chr5_4:67858151-67858170 Msa0866310:five_prime_UTR 30.0%
!!! GAATAATCAGTTTTGGGAAA+TGG + chr5_4:67858158-67858177 Msa0866310:five_prime_UTR 30.0%
TACTATCATGAAGCTTCTTT+AGG - chr5_4:67858244-67858263 None:intergenic 30.0%
AAAGAAGCTTCATGATAGTA+AGG + chr5_4:67858244-67858263 Msa0866310:exon 30.0%
AATGTTGGAAATTCAAAACC+AGG + chr5_4:67858318-67858337 Msa0866310:CDS 30.0%
!! AGTTGTTTAATTTTTGCAGG+GGG + chr5_4:67858599-67858618 Msa0866310:intron 30.0%
GATAAAAGGTCTTCAAATTC+TGG - chr5_4:67858705-67858724 None:intergenic 30.0%
! GAATTTGAAGACCTTTTATC+TGG + chr5_4:67858705-67858724 Msa0866310:CDS 30.0%
TGAAGAAAATAACGATGAGA+AGG + chr5_4:67858752-67858771 Msa0866310:CDS 30.0%
GTTGTTTAAGCAACAAAAGT+TGG - chr5_4:67859127-67859146 None:intergenic 30.0%
TTGCTTAAACAACAAGTTTC+TGG + chr5_4:67859134-67859153 Msa0866310:CDS 30.0%
TTCATTATCGAGTTTGAACA+AGG + chr5_4:67859381-67859400 Msa0866310:intron 30.0%
! TTTCTAAGTTTTGCATCACT+TGG + chr5_4:67859435-67859454 Msa0866310:intron 30.0%
GTATATTCAACGAAGTTGTT+TGG - chr5_4:67859572-67859591 None:intergenic 30.0%
AAACACTAAAGACACTTTGT+AGG - chr5_4:67859622-67859641 None:intergenic 30.0%
AATATACCAGCATCACAAAA+TGG - chr5_4:67859664-67859683 None:intergenic 30.0%
ATCCAGAAATTGAAGAAATG+GGG + chr5_4:67860332-67860351 Msa0866310:CDS 30.0%
AAGAACACTAGAATCATCTT+TGG - chr5_4:67860363-67860382 None:intergenic 30.0%
TGAGTATGAGTGTTAAATCT+AGG + chr5_4:67860426-67860445 Msa0866310:CDS 30.0%
GAGTATGAGTGTTAAATCTA+GGG + chr5_4:67860427-67860446 Msa0866310:CDS 30.0%
AGTATGAGTGTTAAATCTAG+GGG + chr5_4:67860428-67860447 Msa0866310:CDS 30.0%
ATCAAGTGACTCACTAAATT+CGG + chr5_4:67860583-67860602 Msa0866310:CDS 30.0%
GTATAAAGATCGCCATAAAT+TGG + chr5_4:67860673-67860692 Msa0866310:CDS 30.0%
TTAGGTGGCAAAGATATATT+AGG - chr5_4:67860803-67860822 None:intergenic 30.0%
TTTGAACTAGCATGAACAAT+TGG - chr5_4:67860848-67860867 None:intergenic 30.0%
TAGTTCAAATGATCAATCTG+AGG + chr5_4:67860859-67860878 Msa0866310:CDS 30.0%
TGATAAAATTCGACTAACTG+TGG - chr5_4:67861169-67861188 None:intergenic 30.0%
AAGTTTAACATACAGCTAAG+AGG - chr5_4:67861309-67861328 None:intergenic 30.0%
! TCTTAAGTCATGACACATTT+TGG + chr5_4:67861364-67861383 Msa0866310:intron 30.0%
TTGGAGTTCCCTTTATATTA+TGG + chr5_4:67861697-67861716 Msa0866310:intron 30.0%
TCATAGGAAATCAAATGAGA+TGG - chr5_4:67861749-67861768 None:intergenic 30.0%
GATAAATACTATGGTAGGAA+GGG - chr5_4:67861978-67861997 None:intergenic 30.0%
TGATAAATACTATGGTAGGA+AGG - chr5_4:67861979-67861998 None:intergenic 30.0%
TTACTTACCAAGAAAATGGA+TGG + chr5_4:67862001-67862020 Msa0866310:intron 30.0%
ATTGTTACGAACAAGAGATA+TGG + chr5_4:67862138-67862157 Msa0866310:CDS 30.0%
! AATTTGGAATCCCAATAAAC+TGG + chr5_4:67862179-67862198 Msa0866310:CDS 30.0%
AATCTTGTAGCCAGTTTATT+GGG - chr5_4:67862192-67862211 None:intergenic 30.0%
! CTAACCAATGGTATTTCTAT+TGG - chr5_4:67862250-67862269 None:intergenic 30.0%
! ATACTGGTTATTCTAACCAA+TGG - chr5_4:67862262-67862281 None:intergenic 30.0%
! TTTTCCTCTCTTATGGAATA+TGG - chr5_4:67862292-67862311 None:intergenic 30.0%
!!! TCAAGTTTTTTCCTCTCTTA+TGG - chr5_4:67862299-67862318 None:intergenic 30.0%
GCTTATTATTAATCACATGC+TGG + chr5_4:67862471-67862490 Msa0866310:intron 30.0%
! TTCTTGTTTGTGAGAACAAT+TGG - chr5_4:67862858-67862877 None:intergenic 30.0%
!! TGAAGGCTTTTGAAGATTTA+AGG + chr5_4:67862997-67863016 Msa0866310:CDS 30.0%
TGATGAGTATTCTATGTTTC+TGG - chr5_4:67863077-67863096 None:intergenic 30.0%
ATATACAGAAGCAAATACCA+AGG - chr5_4:67863124-67863143 None:intergenic 30.0%
GAATGAATTATACAGCTGAA+AGG - chr5_4:67863152-67863171 None:intergenic 30.0%
TGAAATACTAAGATGCTAAG+CGG - chr5_4:67863333-67863352 None:intergenic 30.0%
AGTTAAAACTAACCAGCTAG+GGG - chr5_4:67857814-67857833 None:intergenic 35.0%
CAGTTAAAACTAACCAGCTA+GGG - chr5_4:67857815-67857834 None:intergenic 35.0%
ACAGTTAAAACTAACCAGCT+AGG - chr5_4:67857816-67857835 None:intergenic 35.0%
GAGGCCAAAAATGAACAAAA+AGG - chr5_4:67857912-67857931 None:intergenic 35.0%
!!! CATTTTTGGCCTCTAGTTAT+TGG + chr5_4:67857919-67857938 Msa0866310:five_prime_UTR 35.0%
TGATGATAAAGCCAATTGTG+TGG + chr5_4:67857983-67858002 Msa0866310:five_prime_UTR 35.0%
! AGTGGTATTTTCCACACAAT+TGG - chr5_4:67857997-67858016 None:intergenic 35.0%
GCACACACAAGGAAAAAAAA+AGG - chr5_4:67858072-67858091 None:intergenic 35.0%
! TTCTCTTTTTCTGTCCCAAA+TGG + chr5_4:67858098-67858117 Msa0866310:five_prime_UTR 35.0%
GTGATGAAACAGAATCCATT+TGG - chr5_4:67858116-67858135 None:intergenic 35.0%
AGCTTCATGATAGTAAGGTT+AGG + chr5_4:67858249-67858268 Msa0866310:exon 35.0%
AAATTCTAGCAACAAGTACC+TGG - chr5_4:67858339-67858358 None:intergenic 35.0%
! AAGCAACTTCGTCTACATTT+TGG + chr5_4:67858402-67858421 Msa0866310:intron 35.0%
ACTCAATCTCTCCAGATAAA+AGG - chr5_4:67858719-67858738 None:intergenic 35.0%
GAGATTGAGTTATCATTTCC+TGG + chr5_4:67858729-67858748 Msa0866310:CDS 35.0%
!! TCATCGTTATTTTCTTCACC+AGG - chr5_4:67858750-67858769 None:intergenic 35.0%
TACCATTAATTCTCTGCAAG+CGG + chr5_4:67858977-67858996 Msa0866310:CDS 35.0%
CTTCAAGAAGAACTCACAAA+TGG + chr5_4:67859011-67859030 Msa0866310:CDS 35.0%
GTTGGCTAGAAACAAGATAA+AGG + chr5_4:67859058-67859077 Msa0866310:CDS 35.0%
!!! ACAAAAGTTGGCCTTTTGTT+TGG - chr5_4:67859115-67859134 None:intergenic 35.0%
GAAAGCTGTGAATGATTTAG+AGG + chr5_4:67859214-67859233 Msa0866310:CDS 35.0%
! CAAAGTGTCTTTAGTGTTTC+AGG + chr5_4:67859623-67859642 Msa0866310:intron 35.0%
! CATAACTTTTGACCACTTCT+CGG - chr5_4:67859804-67859823 None:intergenic 35.0%
TGGAAGGACTTCAAATGAAT+CGG + chr5_4:67860000-67860019 Msa0866310:CDS 35.0%
TTGTCAAAATCTTCACTTCC+TGG - chr5_4:67860254-67860273 None:intergenic 35.0%
TACCCCATTTCTTCAATTTC+TGG - chr5_4:67860337-67860356 None:intergenic 35.0%
! TCACCATCAAGATCTTTTTC+AGG + chr5_4:67860386-67860405 Msa0866310:CDS 35.0%
! ACACTCATACTCATCCTTTT+TGG - chr5_4:67860419-67860438 None:intergenic 35.0%
CTTATCATCAAGCTTTCAAG+CGG - chr5_4:67860455-67860474 None:intergenic 35.0%
GGAGAGTGATCTAAAAGAAA+AGG + chr5_4:67860706-67860725 Msa0866310:CDS 35.0%
GAGTGATCTAAAAGAAAAGG+CGG + chr5_4:67860709-67860728 Msa0866310:CDS 35.0%
AAAGCAAGAGTTCAGAAGTT+TGG + chr5_4:67860734-67860753 Msa0866310:CDS 35.0%
AAGCAAGAGTTCAGAAGTTT+GGG + chr5_4:67860735-67860754 Msa0866310:CDS 35.0%
TCAAATGATCAATCTGAGGA+TGG + chr5_4:67860863-67860882 Msa0866310:CDS 35.0%
GGCAAACTTTATCTTGCTAA+TGG - chr5_4:67860909-67860928 None:intergenic 35.0%
ACAAACTCAAATCCTGCAAA+TGG + chr5_4:67860998-67861017 Msa0866310:CDS 35.0%
AAAGCTGATGTAGAAACACA+AGG + chr5_4:67861435-67861454 Msa0866310:CDS 35.0%
! AGGTGATTTTGTCACATCAT+TGG + chr5_4:67861455-67861474 Msa0866310:CDS 35.0%
TGATGAGAATTGACACCTAA+AGG - chr5_4:67861576-67861595 None:intergenic 35.0%
! ATATGAGAAGGCATGAAACT+TGG + chr5_4:67861643-67861662 Msa0866310:intron 35.0%
! TATCAAGCCATCCATTTTCT+TGG - chr5_4:67862011-67862030 None:intergenic 35.0%
! CAAGAGATATGGCTATTTCA+CGG + chr5_4:67862149-67862168 Msa0866310:CDS 35.0%
ATTTCACGGTACAGAGAATT+TGG + chr5_4:67862163-67862182 Msa0866310:CDS 35.0%
GAATCTTGTAGCCAGTTTAT+TGG - chr5_4:67862193-67862212 None:intergenic 35.0%
ATAAACTGGCTACAAGATTC+TGG + chr5_4:67862193-67862212 Msa0866310:CDS 35.0%
ATGACCATATTCCATAAGAG+AGG + chr5_4:67862285-67862304 Msa0866310:intron 35.0%
TTTCTTCTGTACAACTAGCA+AGG + chr5_4:67862522-67862541 Msa0866310:CDS 35.0%
TCTGAACTTGATGCATTATC+TGG + chr5_4:67862566-67862585 Msa0866310:CDS 35.0%
AATTACGAACCTGATGAACA+CGG - chr5_4:67862649-67862668 None:intergenic 35.0%
GTTCATCAGGTTCGTAATTT+AGG + chr5_4:67862650-67862669 Msa0866310:intron 35.0%
!! CCAGTATTAGAGTGTTGTAT+TGG - chr5_4:67862927-67862946 None:intergenic 35.0%
CCAATACAACACTCTAATAC+TGG + chr5_4:67862924-67862943 Msa0866310:intron 35.0%
! ATACTGGTGCAAAACTCTTT+TGG + chr5_4:67862940-67862959 Msa0866310:intron 35.0%
TATCTTCTTCACCAACTTGA+GGG - chr5_4:67863046-67863065 None:intergenic 35.0%
CAGCTGTATAATTCATTCTG+CGG + chr5_4:67863154-67863173 Msa0866310:three_prime_UTR 35.0%
ATCAGAAAGATAGATCATGG+AGG + chr5_4:67863378-67863397 Msa0866310:three_prime_UTR 35.0%
CTAGGGGAACAAGATTGATA+AGG - chr5_4:67857798-67857817 None:intergenic 40.0%
! TTTTGGCCTCTAGTTATTGG+TGG + chr5_4:67857922-67857941 Msa0866310:five_prime_UTR 40.0%
CTTCAACAGTGATGAAAGCA+GGG - chr5_4:67858138-67858157 None:intergenic 40.0%
ACTGTTAAGCAGCTCAATGT+TGG + chr5_4:67858303-67858322 Msa0866310:CDS 40.0%
!!! CTACATTTTGGCTCAGAACT+TGG + chr5_4:67858414-67858433 Msa0866310:intron 40.0%
GTCTAAAGATCGTCAAGATG+AGG + chr5_4:67858446-67858465 Msa0866310:CDS 40.0%
!! TGTTTAATTTTTGCAGGGGG+AGG + chr5_4:67858602-67858621 Msa0866310:intron 40.0%
TAGTGAAGGAATTGGAGGAA+AGG + chr5_4:67858835-67858854 Msa0866310:CDS 40.0%
AGTGAAGGAATTGGAGGAAA+GGG + chr5_4:67858836-67858855 Msa0866310:CDS 40.0%
GAAAGGGAAGTGAAACTTGA+AGG + chr5_4:67858852-67858871 Msa0866310:CDS 40.0%
GGAGAATTGCTTGAGTACTA+TGG + chr5_4:67858873-67858892 Msa0866310:CDS 40.0%
GCTTGAGTACTATGGTTTGA+AGG + chr5_4:67858881-67858900 Msa0866310:CDS 40.0%
CAGACATTGTGGAGTTACAA+CGG + chr5_4:67858913-67858932 Msa0866310:CDS 40.0%
ACGGCAGCTGAAAATTAAGA+CGG + chr5_4:67858932-67858951 Msa0866310:CDS 40.0%
CTTGAGGCTAACCAAACAAA+AGG + chr5_4:67859101-67859120 Msa0866310:CDS 40.0%
TGGTCTACAAGTGAAAGAAG+AGG + chr5_4:67859154-67859173 Msa0866310:CDS 40.0%
TCTACAAGTGAAAGAAGAGG+CGG + chr5_4:67859157-67859176 Msa0866310:CDS 40.0%
! TGATTTAGAGGTTGCTGTTG+TGG + chr5_4:67859226-67859245 Msa0866310:CDS 40.0%
!!! GTATTGCCATTTTGTGATGC+TGG + chr5_4:67859655-67859674 Msa0866310:intron 40.0%
GTATACTTTGTTCCGAGAAG+TGG + chr5_4:67859789-67859808 Msa0866310:intron 40.0%
AATGGTTGCAAAGGCAAAAG+AGG + chr5_4:67859932-67859951 Msa0866310:CDS 40.0%
AAGAACTCGTATACCTTCGT+TGG + chr5_4:67860036-67860055 Msa0866310:CDS 40.0%
AGAACTCGTATACCTTCGTT+GGG + chr5_4:67860037-67860056 Msa0866310:CDS 40.0%
GTATGAGCTAAAGAATCACC+AGG + chr5_4:67860076-67860095 Msa0866310:CDS 40.0%
TTTGCCTTCGCTTGTGATTT+CGG - chr5_4:67860149-67860168 None:intergenic 40.0%
CAGCTGATGTTAGAATATGC+CGG + chr5_4:67860170-67860189 Msa0866310:CDS 40.0%
GATGTTAGAATATGCCGGAT+CGG + chr5_4:67860175-67860194 Msa0866310:CDS 40.0%
CTGCCTGAAAAAGATCTTGA+TGG - chr5_4:67860392-67860411 None:intergenic 40.0%
TTTCAGGCAGTTCTCCAAAA+AGG + chr5_4:67860402-67860421 Msa0866310:CDS 40.0%
! CGCTTGAAAGCTTGATGATA+AGG + chr5_4:67860453-67860472 Msa0866310:CDS 40.0%
CTAGCAGTATTAGGAGTTTC+AGG - chr5_4:67860542-67860561 None:intergenic 40.0%
! CTGATGACTTGGACATCAAA+TGG - chr5_4:67860622-67860641 None:intergenic 40.0%
TATGGCGATCTTTATACGCA+GGG - chr5_4:67860670-67860689 None:intergenic 40.0%
TTATGGCGATCTTTATACGC+AGG - chr5_4:67860671-67860690 None:intergenic 40.0%
AGGTCTATCTCTTTCGATCT+TGG - chr5_4:67860783-67860802 None:intergenic 40.0%
AGTTTGCCGACATTGAGAAA+AGG + chr5_4:67860921-67860940 Msa0866310:CDS 40.0%
! AGTAGGCCTTTTCTCAATGT+CGG - chr5_4:67860930-67860949 None:intergenic 40.0%
ACATTGAGAAAAGGCCTACT+CGG + chr5_4:67860930-67860949 Msa0866310:CDS 40.0%
GATGCTAGGAACAACATGAT+TGG + chr5_4:67861259-67861278 Msa0866310:CDS 40.0%
GTCTTCAATATCTGAGAAGG+AGG - chr5_4:67861499-67861518 None:intergenic 40.0%
CAGGTCTTCAATATCTGAGA+AGG - chr5_4:67861502-67861521 None:intergenic 40.0%
CTTCTCAGATATTGAAGACC+TGG + chr5_4:67861500-67861519 Msa0866310:CDS 40.0%
TTCATCTAGCCAGTTCACAA+AGG - chr5_4:67861529-67861548 None:intergenic 40.0%
AGATGAAGAACTTTCCTTCC+TGG + chr5_4:67861542-67861561 Msa0866310:CDS 40.0%
! CTGTCTTGAAGCACTTTGAT+TGG + chr5_4:67861790-67861809 Msa0866310:CDS 40.0%
AAGGTAAAGCAGATGCACTA+AGG + chr5_4:67861817-67861836 Msa0866310:CDS 40.0%
AGGTAAAGCAGATGCACTAA+GGG + chr5_4:67861818-67861837 Msa0866310:CDS 40.0%
GCAACTTCACATGAGAGTTT+GGG - chr5_4:67861909-67861928 None:intergenic 40.0%
AGCAACTTCACATGAGAGTT+TGG - chr5_4:67861910-67861929 None:intergenic 40.0%
! GGTTTGAAACATTTGCAGAG+TGG + chr5_4:67862099-67862118 Msa0866310:intron 40.0%
!! CTACAAGATTCTGGAGTTGT+AGG + chr5_4:67862202-67862221 Msa0866310:CDS 40.0%
GGAATATGGTCATAGCATAC+TGG - chr5_4:67862278-67862297 None:intergenic 40.0%
AGAATCAAGAACTCTCTAGC+TGG - chr5_4:67862605-67862624 None:intergenic 40.0%
AGAGAGTTCTTGATTCTGCA+AGG + chr5_4:67862608-67862627 Msa0866310:CDS 40.0%
! TTTTGCTTTCCGTGTTCATC+AGG + chr5_4:67862637-67862656 Msa0866310:CDS 40.0%
TAAGAAAAAGGGGTTGACTG+AGG + chr5_4:67862729-67862748 Msa0866310:intron 40.0%
!!! CTCTTTTGGTTTCAGTTTGC+AGG + chr5_4:67862954-67862973 Msa0866310:intron 40.0%
!!! TTTTGGTTTCAGTTTGCAGG+AGG + chr5_4:67862957-67862976 Msa0866310:intron 40.0%
ATCTTCTTCACCAACTTGAG+GGG - chr5_4:67863045-67863064 None:intergenic 40.0%
CTATCTTCTTCACCAACTTG+AGG - chr5_4:67863047-67863066 None:intergenic 40.0%
! GTAGGTAGTGATGATGATCT+TGG - chr5_4:67863254-67863273 None:intergenic 40.0%
ATCAATCTTGTTCCCCTAGC+TGG + chr5_4:67857799-67857818 Msa0866310:five_prime_UTR 45.0%
GAGAAACACATGCACACACA+AGG - chr5_4:67858083-67858102 None:intergenic 45.0%
CCTTCAACAGTGATGAAAGC+AGG - chr5_4:67858139-67858158 None:intergenic 45.0%
CCTGCTTTCATCACTGTTGA+AGG + chr5_4:67858136-67858155 Msa0866310:five_prime_UTR 45.0%
GACGAAGTTGCTTAGTTCGT+AGG - chr5_4:67858395-67858414 None:intergenic 45.0%
! GCTCAGAACTTGGTGAAGAA+AGG + chr5_4:67858424-67858443 Msa0866310:intron 45.0%
TCAGCTAGTGAAGGAATTGG+AGG + chr5_4:67858830-67858849 Msa0866310:CDS 45.0%
GTACTATGGTTTGAAGGAGC+AGG + chr5_4:67858887-67858906 Msa0866310:CDS 45.0%
GCAGCTGAAAATTAAGACGG+TGG + chr5_4:67858935-67858954 Msa0866310:CDS 45.0%
CTCCGCTTGCAGAGAATTAA+TGG - chr5_4:67858982-67859001 None:intergenic 45.0%
TGCGAAGAGAGATCTTGAGT+TGG + chr5_4:67859040-67859059 Msa0866310:CDS 45.0%
ACAAAGACAGATGCAGCTTG+AGG + chr5_4:67859085-67859104 Msa0866310:CDS 45.0%
CTACAAGTGAAAGAAGAGGC+GGG + chr5_4:67859158-67859177 Msa0866310:CDS 45.0%
! TTGCTGTTGTGGAGCTTAAG+AGG + chr5_4:67859237-67859256 Msa0866310:CDS 45.0%
GAGTCTGACCTCTGTCATAT+TGG - chr5_4:67859342-67859361 None:intergenic 45.0%
TCTTGGACTGCAGAGTGAAA+TGG + chr5_4:67859914-67859933 Msa0866310:intron 45.0%
GCAGAGTGAAATGGTTGCAA+AGG + chr5_4:67859923-67859942 Msa0866310:intron 45.0%
! AACATGCATTGACCCAACGA+AGG - chr5_4:67860052-67860071 None:intergenic 45.0%
GTTGGGTCAATGCATGTTTG+AGG + chr5_4:67860054-67860073 Msa0866310:CDS 45.0%
TTGCCTTCGCTTGTGATTTC+GGG - chr5_4:67860148-67860167 None:intergenic 45.0%
ACTTCCTGGTGAAGAAGGAT+GGG - chr5_4:67860240-67860259 None:intergenic 45.0%
TCTTCACTTCCTGGTGAAGA+AGG - chr5_4:67860245-67860264 None:intergenic 45.0%
GGTGATTGCTACACTATCAC+TGG - chr5_4:67860483-67860502 None:intergenic 45.0%
AGTGTAGCAATCACCACCTT+TGG + chr5_4:67860488-67860507 Msa0866310:CDS 45.0%
CAATCACCACCTTTGGTCAA+GGG + chr5_4:67860495-67860514 Msa0866310:CDS 45.0%
AATCACCACCTTTGGTCAAG+GGG + chr5_4:67860496-67860515 Msa0866310:CDS 45.0%
TTCTTGATCCCCTTGACCAA+AGG - chr5_4:67860507-67860526 None:intergenic 45.0%
ACTCCTAATACTGCTAGTGC+TGG + chr5_4:67860545-67860564 Msa0866310:CDS 45.0%
AGACCAGCACTAGCAGTATT+AGG - chr5_4:67860551-67860570 None:intergenic 45.0%
AGACGCATCAACTGATGACT+TGG - chr5_4:67860633-67860652 None:intergenic 45.0%
AGATCGCCATAAATTGGCCA+TGG + chr5_4:67860679-67860698 Msa0866310:CDS 45.0%
CCATAAATTGGCCATGGCTA+GGG + chr5_4:67860685-67860704 Msa0866310:CDS 45.0%
CATTGAGAAAAGGCCTACTC+GGG + chr5_4:67860931-67860950 Msa0866310:CDS 45.0%
GCAGATGGTATTCCATTTGC+AGG - chr5_4:67861013-67861032 None:intergenic 45.0%
TTTGATAGGCCTCTTGGAAG+AGG - chr5_4:67861112-67861131 None:intergenic 45.0%
CTTCCAAGAGGCCTATCAAA+AGG + chr5_4:67861112-67861131 Msa0866310:CDS 45.0%
ATTCGACTAACTGTGGAGCA+CGG - chr5_4:67861162-67861181 None:intergenic 45.0%
GATGAAACGGGAAGCAAAGA+AGG + chr5_4:67861195-67861214 Msa0866310:CDS 45.0%
! TAAAGGCATGCATACCAGGA+AGG - chr5_4:67861559-67861578 None:intergenic 45.0%
TTCCTGGTATGCATGCCTTT+AGG + chr5_4:67861558-67861577 Msa0866310:intron 45.0%
!! AAGCACTTTGATTGGCCTGA+AGG + chr5_4:67861798-67861817 Msa0866310:CDS 45.0%
AGTGCATCTGCTTTACCTTC+AGG - chr5_4:67861816-67861835 None:intergenic 45.0%
TAAAGCAGATGCACTAAGGG+AGG + chr5_4:67861821-67861840 Msa0866310:CDS 45.0%
ACTATGGTAGGAAGGGAAAG+AGG - chr5_4:67861971-67861990 None:intergenic 45.0%
!! AGATTCTGGAGTTGTAGGCA+AGG + chr5_4:67862207-67862226 Msa0866310:CDS 45.0%
TGCATTATCTGGACCTGAGA+AGG + chr5_4:67862577-67862596 Msa0866310:CDS 45.0%
! CTTTGATGCAGAGAGCATGA+AGG + chr5_4:67862980-67862999 Msa0866310:CDS 45.0%
CAGCAGCCACCAATAACTAG+AGG - chr5_4:67857931-67857950 None:intergenic 50.0%
TGAGGCCACAGAACAAGAGA+AGG + chr5_4:67858464-67858483 Msa0866310:CDS 50.0%
AGCGACCTTCTCTTGTTCTG+TGG - chr5_4:67858472-67858491 None:intergenic 50.0%
GGAGGAAGAAGAGGAGAAAG+AGG + chr5_4:67858620-67858639 Msa0866310:CDS 50.0%
GGAAGAAGAGGAGAAAGAGG+AGG + chr5_4:67858623-67858642 Msa0866310:CDS 50.0%
ACGATTGCGTCAGCTAGTGA+AGG + chr5_4:67858821-67858840 Msa0866310:CDS 50.0%
GCGTCAGCTAGTGAAGGAAT+TGG + chr5_4:67858827-67858846 Msa0866310:CDS 50.0%
GGAGCAGGAATCAGACATTG+TGG + chr5_4:67858902-67858921 Msa0866310:CDS 50.0%
! TGCTGCCGAATCTAGAGTTG+CGG + chr5_4:67859310-67859329 Msa0866310:CDS 50.0%
GAGCTCCGCAACTCTAGATT+CGG - chr5_4:67859318-67859337 None:intergenic 50.0%
GGAGCTCTCCAATATGACAG+AGG + chr5_4:67859331-67859350 Msa0866310:CDS 50.0%
GGTTGCAAAGGCAAAAGAGG+AGG + chr5_4:67859935-67859954 Msa0866310:CDS 50.0%
GGTCTTCATTTGCGTGTCTC+AGG - chr5_4:67859968-67859987 None:intergenic 50.0%
TGAAGACCTGTCGAAGCAAG+TGG + chr5_4:67859980-67859999 Msa0866310:CDS 50.0%
TCGCTTGTGATTTCGGGCTA+AGG - chr5_4:67860142-67860161 None:intergenic 50.0%
TAGCCCGAAATCACAAGCGA+AGG + chr5_4:67860142-67860161 Msa0866310:CDS 50.0%
TTCTCCCATCCTTCTTCACC+AGG + chr5_4:67860233-67860252 Msa0866310:CDS 50.0%
CACTTCCTGGTGAAGAAGGA+TGG - chr5_4:67860241-67860260 None:intergenic 50.0%
GCAATCACCACCTTTGGTCA+AGG + chr5_4:67860494-67860513 Msa0866310:CDS 50.0%
TTGATCCCCTTGACCAAAGG+TGG - chr5_4:67860504-67860523 None:intergenic 50.0%
! GTCATCAGTTGATGCGTCTG+TGG + chr5_4:67860634-67860653 Msa0866310:CDS 50.0%
GCCATAAATTGGCCATGGCT+AGG + chr5_4:67860684-67860703 Msa0866310:CDS 50.0%
CCCTAGCCATGGCCAATTTA+TGG - chr5_4:67860688-67860707 None:intergenic 50.0%
TAGATCACTCTCCCTAGCCA+TGG - chr5_4:67860699-67860718 None:intergenic 50.0%
GAACCACCACCTGATGGTTT+AGG - chr5_4:67860971-67860990 None:intergenic 50.0%
CTAACAGAACCACCACCTGA+TGG - chr5_4:67860977-67860996 None:intergenic 50.0%
! GCTCCTTTTGATAGGCCTCT+TGG - chr5_4:67861118-67861137 None:intergenic 50.0%
AGGCCTATCAAAAGGAGCAG+CGG + chr5_4:67861120-67861139 Msa0866310:CDS 50.0%
! CATCCGCTGCTCCTTTTGAT+AGG - chr5_4:67861126-67861145 None:intergenic 50.0%
CGGGTAACACATCTGATGCT+AGG + chr5_4:67861245-67861264 Msa0866310:CDS 50.0%
ACCTGGTTGCCTTTGTGAAC+TGG + chr5_4:67861517-67861536 Msa0866310:CDS 50.0%
! CACCTAAAGGCATGCATACC+AGG - chr5_4:67861563-67861582 None:intergenic 50.0%
! GAGTTTGGGATCATCGACGA+AGG - chr5_4:67861895-67861914 None:intergenic 50.0%
! TCTCTAGCTGGTTCCTTCTC+AGG - chr5_4:67862593-67862612 None:intergenic 50.0%
TTTGCAGGGGGAGGAAGAAG+AGG + chr5_4:67858611-67858630 Msa0866310:intron 55.0%
GACCTGTCGAAGCAAGTGGA+AGG + chr5_4:67859984-67860003 Msa0866310:CDS 55.0%
GTCCTTCCACTTGCTTCGAC+AGG - chr5_4:67859989-67860008 None:intergenic 55.0%
AAGAATCACCAGGCACCCTC+AGG + chr5_4:67860086-67860105 Msa0866310:CDS 55.0%
!! ATAGTCTTCCTGAGGGTGCC+TGG - chr5_4:67860097-67860116 None:intergenic 55.0%
! CGCGCTGATAGTCTTCCTGA+GGG - chr5_4:67860104-67860123 None:intergenic 55.0%
TCGGGCTAAGGTTCTTGCTG+AGG - chr5_4:67860130-67860149 None:intergenic 55.0%
GAATATGCCGGATCGGAACG+AGG + chr5_4:67860182-67860201 Msa0866310:CDS 55.0%
AAAGGCCTACTCGGGTACCA+AGG + chr5_4:67860939-67860958 Msa0866310:CDS 55.0%
GATGGTTTAGGAGGTGGCCT+TGG - chr5_4:67860959-67860978 None:intergenic 55.0%
AGGCCACCTCCTAAACCATC+AGG + chr5_4:67860959-67860978 Msa0866310:CDS 55.0%
CCACCTGATGGTTTAGGAGG+TGG - chr5_4:67860965-67860984 None:intergenic 55.0%
CCACCTCCTAAACCATCAGG+TGG + chr5_4:67860962-67860981 Msa0866310:CDS 55.0%
CCACCACCTGATGGTTTAGG+AGG - chr5_4:67860968-67860987 None:intergenic 55.0%
CCTCCTAAACCATCAGGTGG+TGG + chr5_4:67860965-67860984 Msa0866310:CDS 55.0%
GGAGGAATGGATGGAGCAGA+TGG - chr5_4:67861028-67861047 None:intergenic 55.0%
GATAGGCCTCTTGGAAGAGG+TGG - chr5_4:67861109-67861128 None:intergenic 55.0%
GCCAGTTCACAAAGGCAACC+AGG - chr5_4:67861521-67861540 None:intergenic 55.0%
ACCAACTTGAGGGGCTTGAG+GGG - chr5_4:67863036-67863055 None:intergenic 55.0%
CACCAACTTGAGGGGCTTGA+GGG - chr5_4:67863037-67863056 None:intergenic 55.0%
TCACCAACTTGAGGGGCTTG+AGG - chr5_4:67863038-67863057 None:intergenic 55.0%
! GCGCGCTGATAGTCTTCCTG+AGG - chr5_4:67860105-67860124 None:intergenic 60.0%
CCCTTGACCTCGTTCCGATC+CGG - chr5_4:67860192-67860211 None:intergenic 60.0%
CCGGATCGGAACGAGGTCAA+GGG + chr5_4:67860189-67860208 Msa0866310:CDS 60.0%
CGGATCGGAACGAGGTCAAG+GGG + chr5_4:67860190-67860209 Msa0866310:CDS 60.0%
GGAGGAGGAGGAGGAATGGA+TGG - chr5_4:67861037-67861056 None:intergenic 60.0%
ACGAGGAGGAGGAGGAGGAA+TGG - chr5_4:67861041-67861060 None:intergenic 60.0%
!! CTTGGAAGAGGTGGTGGAGG+AGG - chr5_4:67861100-67861119 None:intergenic 60.0%
! CCTCTTGGAAGAGGTGGTGG+AGG - chr5_4:67861103-67861122 None:intergenic 60.0%
CCTCCACCACCTCTTCCAAG+AGG + chr5_4:67861100-67861119 Msa0866310:CDS 60.0%
AGGCCTCTTGGAAGAGGTGG+TGG - chr5_4:67861106-67861125 None:intergenic 60.0%
CTTGAGGGGCTTGAGGGGTT+TGG - chr5_4:67863031-67863050 None:intergenic 60.0%
ACCCCTCAAGCCCCTCAAGT+TGG + chr5_4:67863032-67863051 Msa0866310:CDS 60.0%
GCCGGATCGGAACGAGGTCA+AGG + chr5_4:67860188-67860207 Msa0866310:CDS 65.0%
! GGTGGCCTTGGTACCCGAGT+AGG - chr5_4:67860947-67860966 None:intergenic 65.0%
!! GGAAGAGGTGGTGGAGGAGG+CGG - chr5_4:67861097-67861116 None:intergenic 65.0%
GGTGGACGAGGAGGAGGAGG+AGG - chr5_4:67861046-67861065 None:intergenic 70.0%
! CCTGGTGGACGAGGAGGAGG+AGG - chr5_4:67861049-67861068 None:intergenic 70.0%
CCTCCTCCTCCTCGTCCACC+AGG + chr5_4:67861046-67861065 Msa0866310:CDS 70.0%
! CCACCTGGTGGACGAGGAGG+AGG - chr5_4:67861052-67861071 None:intergenic 70.0%
CCTCCTCCTCGTCCACCAGG+TGG + chr5_4:67861049-67861068 Msa0866310:CDS 70.0%
! GGTCCACCTGGTGGACGAGG+AGG - chr5_4:67861055-67861074 None:intergenic 70.0%
! GGAGGTCCACCTGGTGGACG+AGG - chr5_4:67861058-67861077 None:intergenic 70.0%
GGAGGAGGAGGTCCACCTGG+TGG - chr5_4:67861064-67861083 None:intergenic 70.0%
GGTGGAGGAGGAGGTCCACC+TGG - chr5_4:67861067-67861086 None:intergenic 70.0%
GGTGGACCTCCTCCTCCACC+AGG + chr5_4:67861067-67861086 Msa0866310:CDS 70.0%
GGACCTCCTCCTCCACCAGG+TGG + chr5_4:67861070-67861089 Msa0866310:CDS 70.0%
GGTCCACCTGGTGGAGGAGG+AGG - chr5_4:67861076-67861095 None:intergenic 70.0%
GGCGGTCCACCTGGTGGAGG+AGG - chr5_4:67861079-67861098 None:intergenic 75.0%
GGAGGCGGTCCACCTGGTGG+AGG - chr5_4:67861082-67861101 None:intergenic 75.0%
GGAGGAGGCGGTCCACCTGG+TGG - chr5_4:67861085-67861104 None:intergenic 75.0%
GGTGGAGGAGGCGGTCCACC+TGG - chr5_4:67861088-67861107 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 67857759 67863427 67857759 ID=Msa0866310;Name=Msa0866310
chr5_4 mRNA 67857759 67863427 67857759 ID=Msa0866310-mRNA-1;Parent=Msa0866310;Name=Msa0866310-mRNA-1;_AED=0.04;_eAED=0.04;_QI=496|1|1|1|1|1|9|342|997
chr5_4 exon 67857759 67858339 67857759 ID=Msa0866310-mRNA-1:exon:21416;Parent=Msa0866310-mRNA-1
chr5_4 exon 67858430 67858527 67858430 ID=Msa0866310-mRNA-1:exon:21417;Parent=Msa0866310-mRNA-1
chr5_4 exon 67858618 67859352 67858618 ID=Msa0866310-mRNA-1:exon:21418;Parent=Msa0866310-mRNA-1
chr5_4 exon 67859927 67861315 67859927 ID=Msa0866310-mRNA-1:exon:21419;Parent=Msa0866310-mRNA-1
chr5_4 exon 67861432 67861563 67861432 ID=Msa0866310-mRNA-1:exon:21420;Parent=Msa0866310-mRNA-1
chr5_4 exon 67861777 67861958 67861777 ID=Msa0866310-mRNA-1:exon:21421;Parent=Msa0866310-mRNA-1
chr5_4 exon 67862117 67862228 67862117 ID=Msa0866310-mRNA-1:exon:21422;Parent=Msa0866310-mRNA-1
chr5_4 exon 67862515 67862658 67862515 ID=Msa0866310-mRNA-1:exon:21423;Parent=Msa0866310-mRNA-1
chr5_4 exon 67862969 67863427 67862969 ID=Msa0866310-mRNA-1:exon:21424;Parent=Msa0866310-mRNA-1
chr5_4 five_prime_UTR 67857759 67858254 67857759 ID=Msa0866310-mRNA-1:five_prime_utr;Parent=Msa0866310-mRNA-1
chr5_4 CDS 67858255 67858339 67858255 ID=Msa0866310-mRNA-1:cds;Parent=Msa0866310-mRNA-1
chr5_4 CDS 67858430 67858527 67858430 ID=Msa0866310-mRNA-1:cds;Parent=Msa0866310-mRNA-1
chr5_4 CDS 67858618 67859352 67858618 ID=Msa0866310-mRNA-1:cds;Parent=Msa0866310-mRNA-1
chr5_4 CDS 67859927 67861315 67859927 ID=Msa0866310-mRNA-1:cds;Parent=Msa0866310-mRNA-1
chr5_4 CDS 67861432 67861563 67861432 ID=Msa0866310-mRNA-1:cds;Parent=Msa0866310-mRNA-1
chr5_4 CDS 67861777 67861958 67861777 ID=Msa0866310-mRNA-1:cds;Parent=Msa0866310-mRNA-1
chr5_4 CDS 67862117 67862228 67862117 ID=Msa0866310-mRNA-1:cds;Parent=Msa0866310-mRNA-1
chr5_4 CDS 67862515 67862658 67862515 ID=Msa0866310-mRNA-1:cds;Parent=Msa0866310-mRNA-1
chr5_4 CDS 67862969 67863085 67862969 ID=Msa0866310-mRNA-1:cds;Parent=Msa0866310-mRNA-1
chr5_4 three_prime_UTR 67863086 67863427 67863086 ID=Msa0866310-mRNA-1:three_prime_utr;Parent=Msa0866310-mRNA-1
Gene Sequence

>Msa0866310

ATGATAGTAAGGTTAGGACTCATTGTTGCTGCTTCATTAGCAGCTTTTACTGTTAAGCAGCTCAATGTTGGAAATTCAAAACCAGAACTTGGTGAAGAAAGGTCTAAAGATCGTCAAGATGAGGCCACAGAACAAGAGAAGGTCGCTAGTATTACAGATGATTCTTTTGAAAGGAATGATGATGGGGAGGAAGAAGAGGAGAAAGAGGAGGTTAAATTAATTAGCAGCATAATTAATCGAGCGAATGATTTTGAAGATGATATTCTACCAGAATTTGAAGACCTTTTATCTGGAGAGATTGAGTTATCATTTCCTGGTGAAGAAAATAACGATGAGAAGGACAAAGTTTATGAAATTGAGATGGCATACAATGACAGTGAATTAGAACGATTGCGTCAGCTAGTGAAGGAATTGGAGGAAAGGGAAGTGAAACTTGAAGGAGAATTGCTTGAGTACTATGGTTTGAAGGAGCAGGAATCAGACATTGTGGAGTTACAACGGCAGCTGAAAATTAAGACGGTGGAAATTGACATGCTTAATATTACCATTAATTCTCTGCAAGCGGAGCGAAAGAAGCTTCAAGAAGAACTCACAAATGGAGCTTCTGCGAAGAGAGATCTTGAGTTGGCTAGAAACAAGATAAAGGAGCTACAAAGACAGATGCAGCTTGAGGCTAACCAAACAAAAGGCCAACTTTTGTTGCTTAAACAACAAGTTTCTGGTCTACAAGTGAAAGAAGAGGCGGGTGCAATAAAAGATGCCGAGATTGACAAGAAATTGAAAGCTGTGAATGATTTAGAGGTTGCTGTTGTGGAGCTTAAGAGGAAAAATAAAGAACTTCAATACGAGAAGCGAGAGCTTACTGTTAAACTCAATGCTGCCGAATCTAGAGTTGCGGAGCTCTCCAATATGACAGAGAGTGAAATGGTTGCAAAGGCAAAAGAGGAGGTCAGTAACCTGAGACACGCAAATGAAGACCTGTCGAAGCAAGTGGAAGGACTTCAAATGAATCGGTTTAGCGAAGTTGAAGAACTCGTATACCTTCGTTGGGTCAATGCATGTTTGAGGTATGAGCTAAAGAATCACCAGGCACCCTCAGGAAGACTATCAGCGCGCGACCTCAGCAAGAACCTTAGCCCGAAATCACAAGCGAAGGCAAAGCAGCTGATGTTAGAATATGCCGGATCGGAACGAGGTCAAGGGGACACAGATCTTGAAAGCAACTTCTCCCATCCTTCTTCACCAGGAAGTGAAGATTTTGACAATGCTTCTATTGACAGCTTCTCTAGCAAATATAGTAGTGTTAGCAAGAAAACTAGCTTAATCCAGAAATTGAAGAAATGGGGTAAAACCAAAGATGATTCTAGTGTTCTTTCATCACCATCAAGATCTTTTTCAGGCAGTTCTCCAAAAAGGATGAGTATGAGTGTTAAATCTAGGGGTCCGCTTGAAAGCTTGATGATAAGGAATGCCAGTGATAGTGTAGCAATCACCACCTTTGGTCAAGGGGATCAAGAATCTATTTATTCTCCTGAAACTCCTAATACTGCTAGTGCTGGTCTAAGAAGAGTTACATCAAGTGACTCACTAAATTCGGTTGCTTCTTCATTCCATTTGATGTCCAAGTCATCAGTTGATGCGTCTGTGGACGAAAAGTACCCTGCGTATAAAGATCGCCATAAATTGGCCATGGCTAGGGAGAGTGATCTAAAAGAAAAGGCGGAAAAAGCAAGAGTTCAGAAGTTTGGGAACAGTTCAAATTTGAATATGACCAAGATCGAAAGAGATAGACCTAATATATCTTTGCCACCTAAACTTTCTAAAATAAAGGAGAAGCCAATTGTTCATGCTAGTTCAAATGATCAATCTGAGGATGGAAAGAATGTTGAAAATCAAACCATTAGCAAGATAAAGTTTGCCGACATTGAGAAAAGGCCTACTCGGGTACCAAGGCCACCTCCTAAACCATCAGGTGGTGGTTCTGTTAGCACAAACTCAAATCCTGCAAATGGAATACCATCTGCTCCATCCATTCCTCCTCCTCCTCCTCGTCCACCAGGTGGACCTCCTCCTCCACCAGGTGGACCGCCTCCTCCACCACCTCTTCCAAGAGGCCTATCAAAAGGAGCAGCGGATGACGACAAAGTTCACCGTGCTCCACAGTTAGTCGAATTTTATCAATCATTGATGAAACGGGAAGCAAAGAAGGATACTTCTTCATTATTAGTTTCTTCAACGGGTAACACATCTGATGCTAGGAACAACATGATTGGAGAAATTGAGAATAGATCAACATTCCTCTTAGCTGTGAAAGCTGATGTAGAAACACAAGGTGATTTTGTCACATCATTGGCAACTGAAGTTAGAGCATCCTCCTTCTCAGATATTGAAGACCTGGTTGCCTTTGTGAACTGGCTAGATGAAGAACTTTCCTTCCTGGTTGATGAACGAGCTGTCTTGAAGCACTTTGATTGGCCTGAAGGTAAAGCAGATGCACTAAGGGAGGCAGCTTTTGAATATCAAGATCTGATGAAATTGGAGAATCGAGTCTCTACCTTCGTCGATGATCCCAAACTCTCATGTGAAGTTGCTCTCAAGAAAATGTATTCATTGCTTGAAAAAGTGGAGCAAAGTGTATATGCATTGTTACGAACAAGAGATATGGCTATTTCACGGTACAGAGAATTTGGAATCCCAATAAACTGGCTACAAGATTCTGGAGTTGTAGGCAAGATAAAGCTTTCTTCTGTACAACTAGCAAGGAAGTATATGAAACGTGTTGCATCTGAACTTGATGCATTATCTGGACCTGAGAAGGAACCAGCTAGAGAGTTCTTGATTCTGCAAGGCGTTCGTTTTGCTTTCCGTGTTCATCAGTTTGCAGGAGGCTTTGATGCAGAGAGCATGAAGGCTTTTGAAGATTTAAGGAGTCGAATCCAAACCCCTCAAGCCCCTCAAGTTGGTGAAGAAGATAGTAAACAACCAGAAACATAG
Protein sequence

>Msa0866310

MIVRLGLIVAASLAAFTVKQLNVGNSKPELGEERSKDRQDEATEQEKVASITDDSFERNDDGEEEEEKEEVKLISSIINRANDFEDDILPEFEDLLSGEIELSFPGEENNDEKDKVYEIEMAYNDSELERLRQLVKELEEREVKLEGELLEYYGLKEQESDIVELQRQLKIKTVEIDMLNITINSLQAERKKLQEELTNGASAKRDLELARNKIKELQRQMQLEANQTKGQLLLLKQQVSGLQVKEEAGAIKDAEIDKKLKAVNDLEVAVVELKRKNKELQYEKRELTVKLNAAESRVAELSNMTESEMVAKAKEEVSNLRHANEDLSKQVEGLQMNRFSEVEELVYLRWVNACLRYELKNHQAPSGRLSARDLSKNLSPKSQAKAKQLMLEYAGSERGQGDTDLESNFSHPSSPGSEDFDNASIDSFSSKYSSVSKKTSLIQKLKKWGKTKDDSSVLSSPSRSFSGSSPKRMSMSVKSRGPLESLMIRNASDSVAITTFGQGDQESIYSPETPNTASAGLRRVTSSDSLNSVASSFHLMSKSSVDASVDEKYPAYKDRHKLAMARESDLKEKAEKARVQKFGNSSNLNMTKIERDRPNISLPPKLSKIKEKPIVHASSNDQSEDGKNVENQTISKIKFADIEKRPTRVPRPPPKPSGGGSVSTNSNPANGIPSAPSIPPPPPRPPGGPPPPPGGPPPPPPLPRGLSKGAADDDKVHRAPQLVEFYQSLMKREAKKDTSSLLVSSTGNTSDARNNMIGEIENRSTFLLAVKADVETQGDFVTSLATEVRASSFSDIEDLVAFVNWLDEELSFLVDERAVLKHFDWPEGKADALREAAFEYQDLMKLENRVSTFVDDPKLSCEVALKKMYSLLEKVEQSVYALLRTRDMAISRYREFGIPINWLQDSGVVGKIKLSSVQLARKYMKRVASELDALSGPEKEPAREFLILQGVRFAFRVHQFAGGFDAESMKAFEDLRSRIQTPQAPQVGEEDSKQPET*