AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0655150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0655150 MtrunA17_Chr4g0052411 99.856 694 1 0 1 694 1 694 0.0 1400
Msa0655150 MtrunA17_Chr2g0297281 85.612 695 94 5 1 694 61 750 0.0 1149
Msa0655150 MtrunA17_Chr7g0217421 85.440 364 53 0 219 582 29 392 0.0 648
Msa0655150 MtrunA17_Chr3g0143721 51.031 582 271 6 96 672 124 696 0.0 551
Msa0655150 MtrunA17_Chr1g0158881 50.000 450 203 4 230 677 330 759 1.42e-135 417
Msa0655150 MtrunA17_Chr7g0260601 44.275 524 257 12 182 688 196 701 4.65e-135 413
Msa0655150 MtrunA17_Chr4g0031821 47.788 452 218 8 229 674 320 759 4.31e-132 409
Msa0655150 MtrunA17_Chr6g0476861 46.352 466 228 8 216 672 184 636 3.80e-131 402
Msa0655150 MtrunA17_Chr8g0362771 47.109 467 221 7 215 674 224 671 6.13e-129 398
Msa0655150 MtrunA17_Chr7g0248361 44.556 496 241 11 188 672 159 631 2.26e-127 392
Msa0655150 MtrunA17_Chr3g0135721 46.903 452 220 6 227 674 222 657 3.61e-127 393
Msa0655150 MtrunA17_Chr3g0135761 46.930 456 220 7 223 674 218 655 2.39e-124 385
Msa0655150 MtrunA17_Chr5g0429571 49.453 457 214 9 211 651 290 745 1.13e-123 387
Msa0655150 MtrunA17_Chr3g0104211 46.243 519 234 15 153 646 233 731 1.33e-121 381
Msa0655150 MtrunA17_Chr3g0094871 44.420 448 223 8 229 672 11 436 8.81e-121 367
Msa0655150 MtrunA17_Chr5g0432631 45.435 460 228 8 222 674 220 663 1.18e-120 380
Msa0655150 MtrunA17_Chr5g0432641 41.810 464 243 8 219 673 179 624 2.03e-110 348
Msa0655150 MtrunA17_Chr8g0388371 36.167 600 306 18 146 692 311 886 2.37e-99 325
Msa0655150 MtrunA17_Chr2g0331161 40.564 461 240 8 223 673 409 845 3.51e-92 305
Msa0655150 MtrunA17_Chr1g0168321 41.076 409 184 9 189 590 132 490 1.67e-91 294
Msa0655150 MtrunA17_Chr6g0456351 46.491 342 163 5 151 489 253 577 6.21e-86 282
Msa0655150 MtrunA17_Chr3g0129971 39.446 469 251 8 214 667 280 730 1.18e-80 273
Msa0655150 MtrunA17_Chr8g0357301 34.310 478 269 11 246 686 487 956 5.26e-74 258
Msa0655150 MtrunA17_Chr5g0432391 33.857 446 217 10 227 665 50 424 3.30e-64 219
Msa0655150 MtrunA17_Chr3g0135781 58.659 179 64 3 215 390 42 213 4.74e-63 209
Msa0655150 MtrunA17_Chr8g0345461 39.405 269 162 1 210 477 146 414 1.25e-61 212
Msa0655150 MtrunA17_Chr4g0050561 42.276 246 140 2 230 473 157 402 9.49e-61 209
Msa0655150 MtrunA17_Chr1g0192151 38.235 272 167 1 210 480 148 419 1.50e-60 209
Msa0655150 MtrunA17_Chr4g0014731 38.235 272 167 1 210 480 149 420 2.20e-60 208
Msa0655150 MtrunA17_Chr1g0200081 39.405 269 161 2 210 477 156 423 9.69e-60 207
Msa0655150 MtrunA17_Chr1g0182711 40.816 245 144 1 230 473 189 433 1.49e-56 199
Msa0655150 MtrunA17_Chr7g0262801 40.816 245 144 1 230 473 188 432 3.66e-56 197
Msa0655150 MtrunA17_Chr2g0327121 47.577 227 115 3 229 454 207 430 1.10e-54 201
Msa0655150 MtrunA17_Chr2g0327121 39.623 265 147 4 225 478 478 740 2.25e-53 197
Msa0655150 MtrunA17_Chr7g0264521 42.424 231 130 2 225 454 477 705 6.40e-54 198
Msa0655150 MtrunA17_Chr7g0264521 46.256 227 118 3 229 454 206 429 4.20e-53 196
Msa0655150 MtrunA17_Chr1g0180791 46.696 227 117 3 229 454 205 428 1.19e-53 197
Msa0655150 MtrunA17_Chr1g0180791 42.424 231 130 2 225 454 476 704 8.45e-53 195
Msa0655150 MtrunA17_Chr7g0255651 44.934 227 124 1 229 454 282 508 4.45e-53 192
Msa0655150 MtrunA17_Chr7g0255651 33.333 222 134 5 253 467 38 252 4.21e-23 104
Msa0655150 MtrunA17_Chr3g0145011 40.693 231 136 1 228 457 138 368 1.59e-52 186
Msa0655150 MtrunA17_Chr3g0141901 40.693 231 136 1 228 457 135 365 2.39e-52 186
Msa0655150 MtrunA17_Chr2g0277831 45.957 235 119 5 221 452 527 756 2.26e-50 188
Msa0655150 MtrunA17_Chr2g0277831 45.148 237 117 3 226 455 240 470 8.00e-46 175
Msa0655150 MtrunA17_Chr3g0108321 48.333 180 92 1 229 407 159 338 2.75e-50 179
Msa0655150 MtrunA17_Chr7g0255721 42.222 225 128 2 229 452 685 908 6.09e-48 182
Msa0655150 MtrunA17_Chr7g0255721 43.434 198 104 3 261 455 417 609 1.50e-34 141
Msa0655150 MtrunA17_Chr7g0255691 44.934 227 124 1 229 454 286 512 8.15e-48 177
Msa0655150 MtrunA17_Chr7g0255691 35.458 251 135 8 232 468 20 257 2.17e-27 117
Msa0655150 MtrunA17_Chr7g0255901 39.608 255 144 7 225 473 637 887 1.54e-45 174
Msa0655150 MtrunA17_Chr7g0255641 39.556 225 134 2 229 452 658 881 2.23e-45 174
Msa0655150 MtrunA17_Chr7g0255641 40.933 193 104 5 267 456 432 617 3.64e-31 130
Msa0655150 MtrunA17_Chr4g0043381 41.704 223 126 2 231 452 839 1058 3.03e-45 174
Msa0655150 MtrunA17_Chr3g0135791 35.793 271 158 4 422 690 8 264 1.16e-42 156
Msa0655150 MtrunA17_Chr1g0190401 28.657 499 283 12 229 664 677 1165 9.27e-42 164
Msa0655150 MtrunA17_Chr7g0217411 61.682 107 41 0 572 678 6 112 1.24e-41 147
Msa0655150 MtrunA17_Chr3g0086401 39.841 251 128 7 231 467 94 335 2.32e-41 160
Msa0655150 MtrunA17_Chr3g0086401 38.095 252 126 6 225 452 381 626 3.99e-40 157
Msa0655150 MtrunA17_Chr2g0321241 37.500 288 164 9 212 491 117 396 2.74e-41 156
Msa0655150 MtrunA17_Chr2g0327231 42.778 180 102 1 210 388 327 506 1.11e-40 156
Msa0655150 MtrunA17_Chr2g0327231 41.758 91 50 1 229 319 153 240 2.75e-14 76.3
Msa0655150 MtrunA17_Chr3g0086411 37.652 247 132 4 225 452 211 454 2.78e-40 154
Msa0655150 MtrunA17_Chr3g0086411 44.079 152 67 4 316 455 7 152 1.51e-23 105
Msa0655150 MtrunA17_Chr4g0026631 40.426 235 128 8 212 442 112 338 1.70e-39 151
Msa0655150 MtrunA17_Chr8g0387641 39.286 224 129 5 229 449 521 740 1.50e-38 153
Msa0655150 MtrunA17_Chr4g0004121 37.154 253 143 6 223 465 236 482 7.78e-38 148
Msa0655150 MtrunA17_Chr6g0462581 41.333 225 124 6 228 449 499 718 2.58e-37 149
Msa0655150 MtrunA17_Chr4g0033451 38.589 241 130 5 226 455 377 610 5.56e-37 149
Msa0655150 MtrunA17_Chr4g0038101 38.865 229 126 6 228 449 720 941 6.59e-37 148
Msa0655150 MtrunA17_Chr1g0195741 40.529 227 125 6 228 449 937 1158 2.31e-36 147
Msa0655150 MtrunA17_Chr3g0116131 40.343 233 128 7 223 449 895 1122 2.84e-36 147
Msa0655150 MtrunA17_Chr6g0459561 38.462 234 131 8 223 450 376 602 3.17e-36 145
Msa0655150 MtrunA17_Chr5g0397121 38.667 225 131 5 228 449 512 732 8.26e-36 144
Msa0655150 MtrunA17_Chr1g0202371 38.696 230 123 7 228 449 396 615 1.70e-35 143
Msa0655150 MtrunA17_Chr1g0202381 39.556 225 127 6 229 449 468 687 4.21e-35 142
Msa0655150 MtrunA17_Chr1g0195731 38.428 229 131 6 226 449 931 1154 5.45e-35 142
Msa0655150 MtrunA17_Chr3g0127431 37.339 233 131 6 229 454 84 308 1.85e-34 135
Msa0655150 MtrunA17_Chr4g0047411 38.605 215 118 4 254 455 202 415 3.16e-34 139
Msa0655150 MtrunA17_Chr1g0204031 38.596 228 131 6 229 452 557 779 4.97e-34 139
Msa0655150 MtrunA17_Chr4g0052271 37.190 242 136 8 225 460 117 348 4.81e-33 131
Msa0655150 MtrunA17_Chr3g0127401 32.881 295 168 9 226 506 78 356 2.66e-32 129
Msa0655150 MtrunA17_Chr6g0459541 34.884 258 132 9 223 450 36 287 2.89e-32 128
Msa0655150 MtrunA17_Chr2g0316851 35.714 238 131 6 231 455 596 824 5.99e-32 133
Msa0655150 MtrunA17_Chr7g0246111 36.797 231 136 6 228 454 211 435 1.47e-31 129
Msa0655150 MtrunA17_Chr7g0217431 50.435 115 56 1 94 208 75 188 2.39e-27 109
Msa0655150 MtrunA17_Chr6g0459551 38.860 193 105 7 223 412 96 278 5.78e-26 111
Msa0655150 MtrunA17_Chr2g0289231 33.333 237 132 9 226 448 294 518 5.56e-24 107
Msa0655150 MtrunA17_Chr3g0135741 37.121 132 82 1 422 552 6 137 1.94e-18 82.4
Msa0655150 MtrunA17_Chr6g0459531 29.661 236 122 10 223 450 61 260 1.18e-16 81.6
Msa0655150 MtrunA17_Chr5g0432671 39.048 105 59 2 428 531 2 102 2.71e-15 72.4
Msa0655150 MtrunA17_Chr8g0372701 33.146 178 103 6 229 399 222 390 4.88e-14 75.1
Msa0655150 MtrunA17_Chr4g0062081 42.169 83 46 2 227 307 5 87 2.63e-13 66.2
Msa0655150 MtrunA17_Chr3g0134831 27.723 202 116 6 219 399 30 222 9.17e-13 69.7
Msa0655150 MtrunA17_Chr8g0392971 35.052 97 61 2 438 532 51 147 2.63e-12 65.5
Msa0655150 MtrunA17_Chr2g0315971 29.282 181 112 6 226 399 192 363 6.73e-12 68.9
Msa0655150 MtrunA17_Chr2g0315971 28.729 181 114 6 226 399 468 640 4.39e-11 66.2
Msa0655150 MtrunA17_Chr2g0316041 26.702 191 119 6 221 399 129 310 9.16e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0655150 AT2G30950.1 86.047 688 82 9 1 684 1 678 0.0 1152
Msa0655150 AT2G30950.2 86.047 688 82 9 1 684 1 678 0.0 1152
Msa0655150 AT2G30950.3 86.047 688 82 9 1 684 1 678 0.0 1152
Msa0655150 AT2G30950.4 86.047 688 82 9 1 684 5 682 0.0 1152
Msa0655150 AT1G06430.1 84.180 689 86 7 1 684 1 671 0.0 1123
Msa0655150 AT1G06430.3 84.180 689 86 7 1 684 1 671 0.0 1123
Msa0655150 AT1G06430.2 84.180 689 86 7 1 684 1 671 0.0 1123
Msa0655150 AT5G15250.1 67.781 658 192 6 34 680 24 672 0.0 899
Msa0655150 AT5G15250.2 62.400 500 145 7 34 499 24 514 0.0 594
Msa0655150 AT5G42270.1 52.048 586 259 9 96 672 122 694 0.0 555
Msa0655150 AT1G50250.1 53.072 586 255 10 96 672 132 706 0.0 548
Msa0655150 AT5G53170.1 49.780 454 205 6 222 672 351 784 1.86e-134 415
Msa0655150 AT2G26140.1 45.331 514 250 7 189 694 187 677 4.22e-131 404
Msa0655150 AT1G07510.1 47.345 452 220 9 229 674 324 763 7.23e-131 406
Msa0655150 AT2G29080.1 47.672 451 221 8 229 674 319 759 1.31e-124 390
Msa0655150 AT3G47060.1 47.639 466 218 11 210 651 290 753 1.25e-121 382
Msa0655150 AT5G58870.1 47.899 476 224 11 229 692 326 789 5.34e-120 378
Msa0655150 AT4G23940.1 38.327 514 266 10 212 690 410 907 1.59e-99 327
Msa0655150 AT3G02450.1 49.695 328 146 4 151 476 267 577 1.32e-91 298
Msa0655150 AT3G16290.1 39.463 484 249 9 212 675 380 839 1.48e-90 301
Msa0655150 AT5G64580.1 37.630 481 267 8 214 679 297 759 1.33e-79 271
Msa0655150 AT1G79560.2 33.750 480 269 13 246 686 507 976 6.73e-68 241
Msa0655150 AT1G79560.1 33.750 480 269 13 246 686 507 976 8.39e-68 241
Msa0655150 AT1G79560.3 34.423 459 252 13 246 665 507 955 2.09e-66 236
Msa0655150 AT1G53750.1 39.405 269 162 1 210 477 146 414 1.77e-61 212
Msa0655150 AT3G05530.1 38.603 272 166 1 210 480 149 420 6.95e-61 210
Msa0655150 AT5G19990.2 42.276 246 140 2 230 473 101 346 1.26e-60 207
Msa0655150 AT5G19990.1 42.276 246 140 2 230 473 159 404 2.63e-60 209
Msa0655150 AT5G19990.3 42.276 246 140 2 230 473 159 404 2.63e-60 209
Msa0655150 AT5G20000.1 42.276 246 140 2 230 473 159 404 3.33e-60 208
Msa0655150 AT1G09100.1 37.868 272 168 1 210 480 148 419 5.49e-59 205
Msa0655150 AT5G58290.1 42.678 239 136 1 229 466 152 390 4.96e-58 202
Msa0655150 AT1G53780.3 38.662 269 164 1 210 477 317 585 9.48e-58 206
Msa0655150 AT1G53780.1 38.662 269 164 1 210 477 318 586 1.02e-57 206
Msa0655150 AT1G53780.4 38.662 269 164 1 210 477 318 586 1.02e-57 206
Msa0655150 AT1G53780.2 38.662 269 164 1 210 477 339 607 1.53e-57 206
Msa0655150 AT4G29040.1 40.000 245 146 1 230 473 186 430 2.81e-55 196
Msa0655150 AT2G20140.1 42.060 233 134 1 230 461 186 418 9.01e-55 194
Msa0655150 AT3G09840.1 45.679 243 126 4 229 470 204 441 7.08e-54 199
Msa0655150 AT3G09840.1 42.672 232 129 3 225 454 475 704 2.62e-49 186
Msa0655150 AT5G03340.1 45.679 243 126 4 229 470 204 441 1.01e-53 198
Msa0655150 AT5G03340.1 42.424 231 130 2 225 454 475 703 4.47e-53 196
Msa0655150 AT3G53230.1 42.424 231 130 2 225 454 476 704 1.05e-53 198
Msa0655150 AT3G53230.1 44.934 227 121 2 229 454 205 428 2.33e-52 194
Msa0655150 AT1G45000.1 41.739 230 133 1 229 457 136 365 1.43e-53 189
Msa0655150 AT5G43010.1 41.304 230 134 1 229 457 136 365 2.63e-53 189
Msa0655150 AT3G56690.1 44.000 225 124 2 229 452 721 944 1.72e-50 190
Msa0655150 AT3G56690.1 35.443 237 149 2 220 455 373 606 1.69e-38 154
Msa0655150 AT5G08470.1 38.971 272 155 3 231 494 843 1111 3.35e-46 177
Msa0655150 AT5G08470.3 38.971 272 155 3 231 494 834 1102 4.91e-46 177
Msa0655150 AT1G03000.1 38.462 273 156 7 225 489 653 921 3.93e-45 174
Msa0655150 AT3G01610.2 41.833 251 120 6 221 456 222 461 7.24e-44 169
Msa0655150 AT3G01610.2 41.975 243 133 5 212 452 510 746 2.62e-39 155
Msa0655150 AT3G01610.1 41.833 251 120 6 221 456 222 461 7.36e-44 169
Msa0655150 AT3G01610.1 41.975 243 133 5 212 452 510 746 2.42e-39 155
Msa0655150 AT2G03670.1 42.544 228 129 2 229 454 283 510 9.25e-44 167
Msa0655150 AT2G03670.1 33.465 254 151 5 233 475 23 269 5.20e-31 129
Msa0655150 AT1G05910.1 36.559 279 159 5 226 493 375 646 1.07e-40 160
Msa0655150 AT1G64110.5 38.934 244 139 6 228 468 515 751 1.08e-38 154
Msa0655150 AT1G64110.3 38.934 244 139 6 228 468 515 751 1.08e-38 154
Msa0655150 AT1G64110.2 38.934 244 139 6 228 468 517 753 1.08e-38 154
Msa0655150 AT1G64110.4 38.934 244 139 6 228 468 517 753 1.08e-38 154
Msa0655150 AT1G64110.1 38.934 244 139 6 228 468 512 748 1.13e-38 154
Msa0655150 AT3G04340.1 26.562 512 303 11 226 674 778 1279 2.59e-38 153
Msa0655150 AT4G28000.3 40.000 225 127 6 228 449 516 735 6.73e-38 151
Msa0655150 AT4G28000.1 40.000 225 127 6 228 449 514 733 7.19e-38 151
Msa0655150 AT4G28000.2 40.000 225 127 6 228 449 516 735 7.77e-38 151
Msa0655150 AT1G80350.1 38.431 255 137 8 223 465 230 476 1.37e-37 147
Msa0655150 AT2G27600.1 39.149 235 131 8 212 442 114 340 4.60e-37 144
Msa0655150 AT1G50140.3 39.301 229 125 6 228 449 710 931 1.12e-36 148
Msa0655150 AT1G50140.1 39.301 229 125 6 228 449 710 931 1.12e-36 148
Msa0655150 AT1G50140.4 39.301 229 125 6 228 449 710 931 1.12e-36 148
Msa0655150 AT1G50140.2 39.301 229 125 6 228 449 688 909 1.21e-36 148
Msa0655150 AT1G50140.5 39.301 229 125 6 228 449 688 909 1.21e-36 148
Msa0655150 AT4G02480.1 39.738 229 128 6 226 449 957 1180 6.69e-36 146
Msa0655150 AT5G52882.1 39.556 225 128 6 228 449 513 732 8.28e-36 145
Msa0655150 AT2G34560.1 38.136 236 133 7 226 455 97 325 1.57e-35 139
Msa0655150 AT2G34560.2 38.136 236 133 7 226 455 106 334 2.73e-35 138
Msa0655150 AT3G19740.1 37.109 256 137 7 211 449 673 921 2.89e-35 144
Msa0655150 AT1G02890.1 39.316 234 132 6 226 454 938 1166 6.67e-35 143
Msa0655150 AT3G27120.1 37.712 236 130 8 223 450 394 620 6.68e-34 138
Msa0655150 AT4G04910.1 38.140 215 119 4 254 455 239 452 6.97e-34 139
Msa0655150 AT3G15120.1 36.555 238 129 6 231 455 718 946 1.74e-33 139
Msa0655150 AT3G15120.2 36.555 238 129 6 231 455 728 956 1.79e-33 139
Msa0655150 AT2G45500.4 36.364 231 137 6 228 454 79 303 1.87e-33 132
Msa0655150 AT2G45500.3 36.364 231 137 6 228 454 79 303 1.87e-33 132
Msa0655150 AT4G27680.1 32.601 273 165 8 226 485 78 344 3.86e-33 132
Msa0655150 AT2G45500.2 36.364 231 137 6 228 454 212 436 8.88e-33 133
Msa0655150 AT2G45500.5 36.364 231 137 6 228 454 222 446 1.03e-32 133
Msa0655150 AT2G45500.1 36.364 231 137 6 228 454 216 440 1.18e-32 132
Msa0655150 AT2G03670.2 33.465 254 151 5 233 475 23 269 8.82e-32 129
Msa0655150 AT2G03670.2 41.429 140 80 2 229 366 283 422 4.36e-21 97.1
Msa0655150 AT5G53540.1 35.470 234 140 6 226 454 81 308 2.04e-31 127
Msa0655150 AT4G24860.3 38.053 226 130 6 229 449 815 1035 2.36e-31 132
Msa0655150 AT4G24860.1 38.053 226 130 6 229 449 817 1037 2.36e-31 132
Msa0655150 AT4G24860.4 38.053 226 130 6 229 449 790 1010 2.64e-31 131
Msa0655150 AT4G24860.2 38.053 226 130 6 229 449 813 1033 2.96e-31 131
Msa0655150 AT1G45000.2 41.007 139 81 1 229 366 136 274 8.69e-29 118
Msa0655150 AT1G62130.1 35.270 241 132 7 228 464 749 969 2.31e-28 122
Msa0655150 AT1G62130.2 35.270 241 132 7 228 464 742 962 2.56e-28 122
Msa0655150 AT4G04180.1 32.609 230 137 7 229 448 316 537 1.75e-25 112
Msa0655150 AT4G04180.2 32.609 230 137 7 229 448 311 532 1.82e-25 112
Msa0655150 AT5G08470.2 41.216 148 83 2 231 377 843 987 2.50e-25 112
Msa0655150 AT1G02890.2 35.193 233 115 7 226 454 938 1138 5.60e-24 108
Msa0655150 AT5G17760.1 30.168 179 108 5 230 399 217 387 3.36e-13 73.2
Msa0655150 AT2G18193.1 31.818 176 106 5 230 399 207 374 2.38e-12 70.5
Msa0655150 AT5G17740.1 28.333 180 109 5 230 397 209 380 1.81e-11 67.8

Find 209 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGGTTTGCCGGCATTAT+TGG 0.190374 4_3:+63580042 Msa0655150:CDS
TTCGAGGTTTCTTGAGTATT+TGG 0.193224 4_3:+63580120 Msa0655150:CDS
TATTGGTCCTTGGTCACTTA+TGG 0.235513 4_3:+63582254 Msa0655150:CDS
GCAAGAATTGTTGGAGGATT+AGG 0.268443 4_3:+63581691 Msa0655150:CDS
CTGAAATTCCAGTTGAAAAT+CGG 0.283840 4_3:+63582511 Msa0655150:CDS
TGCAACCTATTTCCCAATTC+AGG 0.285706 4_3:-63580211 None:intergenic
AGCATGAACCTTTAGGATTT+CGG 0.289530 4_3:-63581119 None:intergenic
AACAAGGTCTTTCCAGTTCC+TGG 0.294212 4_3:-63580640 None:intergenic
ACATTTGGAATGTCTGATAT+TGG 0.298060 4_3:+63582237 Msa0655150:CDS
TGAGGCTGTGTCTCCTGAAT+TGG 0.304859 4_3:+63580198 Msa0655150:CDS
AAGAGCTTCTTCAGAAATTC+AGG 0.309999 4_3:+63580266 Msa0655150:CDS
TAAGATTGTGGAAGTCCTTC+TGG 0.311011 4_3:+63582437 Msa0655150:CDS
GTCGAGATGTTTGTTGGTAT+TGG 0.311803 4_3:+63580724 Msa0655150:CDS
GCTTTCCCTGCTGCTGTCAT+TGG 0.314297 4_3:+63580367 Msa0655150:CDS
TGTCTCCTGAATTGGGAAAT+AGG 0.315118 4_3:+63580206 Msa0655150:CDS
CAACTCTTTGCAAGAATTGT+TGG 0.316556 4_3:+63581682 Msa0655150:CDS
CGTGTTCGAGTTCAACTTCC+TGG 0.320835 4_3:+63580235 Msa0655150:CDS
GTTGGTTTGCCGGCATTATT+GGG 0.322430 4_3:+63580043 Msa0655150:CDS
TATTGTTAGCATGAACCTTT+AGG 0.322618 4_3:-63581126 None:intergenic
TTGTTGTTGCTGCAACTAAC+AGG 0.324289 4_3:+63580935 Msa0655150:CDS
AGTAGTTCTATTACTGTTTG+TGG 0.337219 4_3:-63579861 None:intergenic
ATAGAATCATCAATCTCTTT+AGG 0.348661 4_3:-63581280 None:intergenic
CTCGAGGCGGTCCGGTGGAA+TGG 0.358005 4_3:+63580405 Msa0655150:CDS
AAATGTCGGTGTTGGTTTGC+CGG 0.361800 4_3:+63580033 Msa0655150:CDS
TTGCAGATGGTAGTCACATT+TGG 0.362813 4_3:+63582222 Msa0655150:intron
CCAAAAGGAGTTCTTCTTGT+TGG 0.368691 4_3:+63580613 Msa0655150:CDS
TCGAGGCGGTCCGGTGGAAT+GGG 0.369632 4_3:+63580406 Msa0655150:CDS
CTTGTTGGTCCTCCAGGAAC+TGG 0.369928 4_3:+63580628 Msa0655150:CDS
TACATACAGGCCATTCAAAC+AGG 0.371825 4_3:-63582561 None:intergenic
CCAACAAGAAGAACTCCTTT+TGG 0.377297 4_3:-63580613 None:intergenic
TCGGTCCTTCCCCTTACATC+TGG 0.380555 4_3:-63581100 None:intergenic
GTTCTTCTTGTTGGTCCTCC+AGG 0.385102 4_3:+63580622 Msa0655150:CDS
AGATGTGTTGAAACAAACTA+TGG 0.385438 4_3:-63582745 None:intergenic
CGGTTGATGTTCCAGATGTA+AGG 0.391954 4_3:+63581089 Msa0655150:CDS
TTTGAAACTTGGCTTTAGAT+TGG 0.395241 4_3:-63580465 None:intergenic
AAACCTCGAATACGACATTC+TGG 0.396169 4_3:-63580107 None:intergenic
TTGTTAGCCAAGGCTATTGC+TGG 0.396534 4_3:+63580658 Msa0655150:CDS
AGACAAAGAGGGACTGGAAT+TGG 0.397460 4_3:+63580832 Msa0655150:CDS
TCAAAAGTCACTCCAGTGTT+TGG 0.403653 4_3:-63580493 None:intergenic
TCATAATGCTCAAGAAGATT+CGG 0.406140 4_3:+63580312 Msa0655150:CDS
CATCCATTTCTGTCAAAAGT+TGG 0.407571 4_3:-63580888 None:intergenic
TTGCCGGCATTATTGGGAAA+TGG 0.408701 4_3:+63580049 Msa0655150:CDS
TGAAATTCCAGTTGAAAATC+GGG 0.410824 4_3:+63582512 Msa0655150:CDS
CAAGTGGATTTATGAAGGAT+TGG 0.414714 4_3:-63579404 None:intergenic
ATTCAAACAGGGACTGCTAC+TGG 0.418905 4_3:-63582549 None:intergenic
GTTTGGTTCCATTTGAAACT+TGG 0.424898 4_3:-63580476 None:intergenic
GTTTCTTGAGTATTTGGATA+AGG 0.428076 4_3:+63580126 Msa0655150:CDS
ATGGGAGGTCCCGGTGGACC+TGG 0.430906 4_3:+63580424 Msa0655150:CDS
TTCTGTCAAAAGTTGGTTGA+GGG 0.432083 4_3:-63580881 None:intergenic
CCTGGATTTCCTATGCAATT+CGG 0.433999 4_3:+63580442 Msa0655150:CDS
AATTACCTGTCTTGCTATAC+CGG 0.437039 4_3:-63581791 None:intergenic
TTCATACCTGTCTATCAAAT+CGG 0.440716 4_3:-63580993 None:intergenic
TTCCTTCTCTCGAGGCGGTC+CGG 0.442619 4_3:+63580397 Msa0655150:CDS
ATTCTCATATAGATCAACTT+TGG 0.444406 4_3:-63580158 None:intergenic
GCATCATCAGCATGTCTTGT+TGG 0.450457 4_3:+63579827 Msa0655150:CDS
TCCGGTGGAATGGGAGGTCC+CGG 0.451748 4_3:+63580415 Msa0655150:CDS
TGATGATGAAGAAGAGTTGG+AGG 0.451916 4_3:-63579433 None:intergenic
CATAATGCTCAAGAAGATTC+GGG 0.453447 4_3:+63580313 Msa0655150:CDS
AAGTGATGATGAAGAAGAGT+TGG 0.454350 4_3:-63579436 None:intergenic
GAGGCTGTGTCTCCTGAATT+GGG 0.454840 4_3:+63580199 Msa0655150:CDS
AAATGTGAGAGAAGAATGTA+TGG 0.456699 4_3:-63579486 None:intergenic
AAGTGGATTTATGAAGGATT+GGG 0.460665 4_3:-63579403 None:intergenic
ATCTAAAGCCAAGTTTCAAA+TGG 0.460715 4_3:+63580468 Msa0655150:CDS
AGTAGCAGTCCCTGTTTGAA+TGG 0.465711 4_3:+63582551 Msa0655150:exon
TTGTTGGAGGATTAGGTGGT+AGG 0.468049 4_3:+63581698 Msa0655150:CDS
AACAGTAATAGAACTACTCT+TGG 0.468446 4_3:+63579866 Msa0655150:CDS
ACTCTTGGTAAGGATTTGAA+TGG 0.469263 4_3:+63579881 Msa0655150:CDS
GCTGGTCGGCGAGGAAGGAC+AGG 0.470330 4_3:+63581250 Msa0655150:CDS
GGGACTGCTACTGGAGTTGA+AGG 0.470521 4_3:-63582540 None:intergenic
CCTCCAGAATGTCGTATTCG+AGG 0.470895 4_3:+63580104 Msa0655150:CDS
CTCTTTGCAAGAATTGTTGG+AGG 0.472097 4_3:+63581685 Msa0655150:CDS
GGTGAGCCTGAGGTTACAAC+TGG 0.473700 4_3:+63581742 Msa0655150:CDS
GCTAGTTTCTTACCCACAAA+TGG 0.476086 4_3:-63581389 None:intergenic
AATGAAGCTGCTATATTAGC+TGG 0.476361 4_3:+63581232 Msa0655150:CDS
GGTTGCAGAACTTTGACTCC+TGG 0.477393 4_3:+63581559 Msa0655150:intron
GACAGAAATGGATGGATTCG+AGG 0.478293 4_3:+63580897 Msa0655150:CDS
AAGGCTATTGCTGGTGAAGC+TGG 0.478309 4_3:+63580667 Msa0655150:CDS
ACCAGGCCGATTTGATAGAC+AGG 0.482217 4_3:+63580987 Msa0655150:CDS
GAATGTCTGATATTGGTCCT+TGG 0.484443 4_3:+63582244 Msa0655150:CDS
GAGTTTGTCGAGATGTTTGT+TGG 0.484687 4_3:+63580718 Msa0655150:CDS
TGGTCATGATGCGGTACAAA+AGG 0.488639 4_3:+63581579 Msa0655150:CDS
CCCGAGAGGTTCACTTCTGT+TGG 0.488698 4_3:+63580580 Msa0655150:CDS
AAAATCAGCAGGAAGGAAGA+AGG 0.491252 4_3:+63579987 Msa0655150:CDS
TAGTGGCGTATCATGAAGTT+GGG 0.491569 4_3:+63581362 Msa0655150:CDS
TTAGTGGCGTATCATGAAGT+TGG 0.491676 4_3:+63581361 Msa0655150:CDS
AGCAACAAGTGGATTTATGA+AGG 0.493275 4_3:-63579409 None:intergenic
GGGATTCTGAAATTGTTGCT+TGG 0.498266 4_3:+63580010 Msa0655150:CDS
TGAATTTCTGAAGAAGCTCT+TGG 0.500518 4_3:-63580264 None:intergenic
AATACACCAATGACAGCAGC+AGG 0.500849 4_3:-63580373 None:intergenic
AGTTCCTCGAGGTCAAGCTC+GGG 0.500879 4_3:+63581609 Msa0655150:CDS
TGGGAAGAGCAAAAGTTTAG+TGG 0.504719 4_3:+63581345 Msa0655150:CDS
CACCTCCATAAAATCCTGCT+TGG 0.506645 4_3:-63580539 None:intergenic
TGTTGGAGGATTAGGTGGTA+GGG 0.508331 4_3:+63581699 Msa0655150:CDS
AAAGTTGATCTATATGAGAA+TGG 0.514012 4_3:+63580160 Msa0655150:CDS
TGATAGAATTGTCGCTGGAA+TGG 0.516197 4_3:+63581303 Msa0655150:CDS
GTTGGTGCTCGCATTCCAAA+AGG 0.518433 4_3:+63580598 Msa0655150:CDS
TTTCCATTTCCCAATAATGC+CGG 0.518756 4_3:-63580052 None:intergenic
TAGTTCCTCGAGGTCAAGCT+CGG 0.519211 4_3:+63581608 Msa0655150:CDS
GTTGATGAAATTGACGCTGT+TGG 0.520478 4_3:+63580808 Msa0655150:CDS
GTCAAGCTCGGGGTCTTACA+TGG 0.521459 4_3:+63581620 Msa0655150:CDS
GACTCTGCGTTATTGAGACC+AGG 0.523124 4_3:+63580970 Msa0655150:CDS
ATCCTTGGAACAAAATCAGC+AGG 0.523200 4_3:+63579976 Msa0655150:CDS
TATTAGCTGGTCGGCGAGGA+AGG 0.526217 4_3:+63581245 Msa0655150:CDS
TGGGGTGGATGAAGCCAAGC+AGG 0.530470 4_3:+63580525 Msa0655150:CDS
GATGGATTCGAGGGAAATAC+CGG 0.531249 4_3:+63580907 Msa0655150:CDS
AAATCAGCAGGAAGGAAGAA+GGG 0.532430 4_3:+63579988 Msa0655150:CDS
AGAATTGTCGCTGGAATGGA+AGG 0.532585 4_3:+63581307 Msa0655150:CDS
TTGCTTGGAAATGTCGGTGT+TGG 0.533808 4_3:+63580025 Msa0655150:CDS
AGAGCTTCTTCAGAAATTCA+GGG 0.534293 4_3:+63580267 Msa0655150:CDS
CACCGGACCGCCTCGAGAGA+AGG 0.534803 4_3:-63580399 None:intergenic
GCTTATGCTGCTGATGAACA+AGG 0.536032 4_3:+63580076 Msa0655150:CDS
GAAGTTGGGCATGCCATTTG+TGG 0.537039 4_3:+63581376 Msa0655150:CDS
CCGAATTGCATAGGAAATCC+AGG 0.539719 4_3:-63580442 None:intergenic
CATAGGAAATCCAGGTCCAC+CGG 0.540380 4_3:-63580434 None:intergenic
CAAAGAGGGACTGGAATTGG+TGG 0.540688 4_3:+63580835 Msa0655150:CDS
GTTGGAAGACAAAGAGGGAC+TGG 0.540999 4_3:+63580826 Msa0655150:CDS
AGCTTCACCAGCAATAGCCT+TGG 0.542257 4_3:-63580665 None:intergenic
GAAGGAACATTAATGACCGA+TGG 0.543574 4_3:+63581325 Msa0655150:CDS
CATAATGAAGAGGGTAACTT+CGG 0.544615 4_3:-63582616 None:intergenic
TTTCTGTCAAAAGTTGGTTG+AGG 0.544666 4_3:-63580882 None:intergenic
TCTATTGATAGAATTGTCGC+TGG 0.544908 4_3:+63581298 Msa0655150:CDS
GAAGGATTGGGTGTGGCTAG+AGG 0.545144 4_3:-63579391 None:intergenic
ACCTGTCTATCAAATCGGCC+TGG 0.546036 4_3:-63580988 None:intergenic
AGGCGGTCCGGTGGAATGGG+AGG 0.546632 4_3:+63580409 Msa0655150:CDS
GGTTGATGTTCCAGATGTAA+GGG 0.547060 4_3:+63581090 Msa0655150:CDS
AGAGGGACTGGAATTGGTGG+AGG 0.547706 4_3:+63580838 Msa0655150:CDS
TGTGGAAGTCCTTCTGGAGA+AGG 0.550581 4_3:+63582443 Msa0655150:CDS
CCAACAGAAGTGAACCTCTC+GGG 0.551725 4_3:-63580580 None:intergenic
AATCACCGGTATAGCAAGAC+AGG 0.551889 4_3:+63581786 Msa0655150:CDS
TTAGATTGGCCGAATTGCAT+AGG 0.553085 4_3:-63580451 None:intergenic
AGCAATAGCCTTGGCTAACA+AGG 0.553692 4_3:-63580656 None:intergenic
TAGCCTTCTTGAACAAGTCA+CGG 0.553994 4_3:-63580759 None:intergenic
ACCGGGACCTCCCATTCCAC+CGG 0.558678 4_3:-63580416 None:intergenic
CTTCTCTCGAGGCGGTCCGG+TGG 0.561799 4_3:+63580400 Msa0655150:CDS
TTTCAAATGGAACCAAACAC+TGG 0.563173 4_3:+63580481 Msa0655150:CDS
TGAGATCAGAGTTGGGTCAT+CGG 0.563203 4_3:-63581653 None:intergenic
TAATAGAACTACTCTTGGTA+AGG 0.564277 4_3:+63579871 Msa0655150:CDS
AAGTTGGGCATGCCATTTGT+GGG 0.566271 4_3:+63581377 Msa0655150:CDS
TCATCAACAAAGACAATGCA+AGG 0.570490 4_3:-63580793 None:intergenic
ACGTTTGATTCGTTTCACTT+CGG 0.571131 4_3:-63579345 None:intergenic
AGAAGCTCTTGGCTAAGTCC+AGG 0.571364 4_3:-63580253 None:intergenic
ATCAGAGTTGGGTCATCGGA+AGG 0.574711 4_3:-63581649 None:intergenic
CACAGCCTCAACAATAGCTA+TGG 0.575621 4_3:-63580185 None:intergenic
GGGAAGGACCGAAATCCTAA+AGG 0.575874 4_3:+63581111 Msa0655150:CDS
CCTGAGGTTACAACTGGTGC+AGG 0.577792 4_3:+63581748 Msa0655150:CDS
GTGTATTGTTCCTTCTCTCG+AGG 0.578733 4_3:+63580389 Msa0655150:CDS
ACAGAAATGGATGGATTCGA+GGG 0.579562 4_3:+63580898 Msa0655150:CDS
GGTGATTTGCAGCAAATCAC+CGG 0.580836 4_3:+63581772 Msa0655150:CDS
AGATCAGCTCCGCTAAAACC+AGG 0.581166 4_3:-63581196 None:intergenic
GTGAGAGAAGAATGTATGGA+AGG 0.584999 4_3:-63579482 None:intergenic
GACGCTGTTGGAAGACAAAG+AGG 0.585021 4_3:+63580820 Msa0655150:CDS
CGATGTTATCATGAGAATGA+TGG 0.588855 4_3:+63582296 Msa0655150:CDS
AGAATTGTTGGAGGATTAGG+TGG 0.589670 4_3:+63581694 Msa0655150:CDS
CTGGAGAAGGAGACGTTGAG+TGG 0.590228 4_3:+63582456 Msa0655150:CDS
CCTGCACCAGTTGTAACCTC+AGG 0.590727 4_3:-63581748 None:intergenic
TGTTGTTGCTGCAACTAACA+GGG 0.592269 4_3:+63580936 Msa0655150:CDS
ACCAACAGAAGTGAACCTCT+CGG 0.592864 4_3:-63580581 None:intergenic
AATTTGAAGCATAATGAAGA+GGG 0.592978 4_3:-63582625 None:intergenic
CAATCTTATCAATTGCCTCA+CGG 0.597266 4_3:-63582422 None:intergenic
GGTGGAATGGGAGGTCCCGG+TGG 0.599843 4_3:+63580418 Msa0655150:CDS
AAATTGCATTGACACAGATA+AGG 0.602585 4_3:+63582394 Msa0655150:CDS
ATAGGAAATCCAGGTCCACC+GGG 0.605635 4_3:-63580433 None:intergenic
GAGTTGGAGGTAGCAACAAG+TGG 0.608044 4_3:-63579420 None:intergenic
AATCAGCAGGAAGGAAGAAG+GGG 0.612772 4_3:+63579989 Msa0655150:CDS
TGAGGCAATTGATAAGATTG+TGG 0.614636 4_3:+63582425 Msa0655150:CDS
AAATTGTTGCTTGGAAATGT+CGG 0.619146 4_3:+63580019 Msa0655150:CDS
GAGGGACTGGAATTGGTGGA+GGG 0.620174 4_3:+63580839 Msa0655150:CDS
TGTCCGTGACTTGTTCAAGA+AGG 0.622308 4_3:+63580756 Msa0655150:CDS
AAATTTGAAGCATAATGAAG+AGG 0.624871 4_3:-63582626 None:intergenic
TTATCATGAGAATGATGGCA+AGG 0.626312 4_3:+63582301 Msa0655150:CDS
TGGAAAGACCTTGTTAGCCA+AGG 0.626550 4_3:+63580648 Msa0655150:CDS
AAGGAACATTAATGACCGAT+GGG 0.627659 4_3:+63581326 Msa0655150:CDS
GATTTATGAAGGATTGGGTG+TGG 0.627688 4_3:-63579398 None:intergenic
ATGTTCCAGATGTAAGGGGA+AGG 0.629803 4_3:+63581095 Msa0655150:CDS
CTGGTCGGCGAGGAAGGACA+GGG 0.631120 4_3:+63581251 Msa0655150:CDS
TAACGCAGAGTCAAGAATGT+CGG 0.631624 4_3:-63580959 None:intergenic
TCAACGTCTCCTTCTCCAGA+AGG 0.631790 4_3:-63582452 None:intergenic
CTCAATGTCAGAAAAGCTTG+CGG 0.631796 4_3:+63582326 Msa0655150:CDS
TCACTTTCCTCTGCACTCAG+AGG 0.636779 4_3:+63579453 Msa0655150:five_prime_UTR
GTGATTGCAATGAGAACACC+TGG 0.637344 4_3:+63581178 Msa0655150:CDS
AAGCTGCTATATTAGCTGGT+CGG 0.645613 4_3:+63581236 Msa0655150:CDS
TATTGTTCCTTCTCTCGAGG+CGG 0.648203 4_3:+63580392 Msa0655150:CDS
TTGGAACAAAATCAGCAGGA+AGG 0.651292 4_3:+63579980 Msa0655150:CDS
GAGGTTACAACTGGTGCAGG+TGG 0.653393 4_3:+63581751 Msa0655150:CDS
ACTGCTACTGGAGTTGAAGG+AGG 0.656492 4_3:-63582537 None:intergenic
GTTGATGTTCCAGATGTAAG+GGG 0.661366 4_3:+63581091 Msa0655150:CDS
AGACCCCGAGCTTGACCTCG+AGG 0.661905 4_3:-63581613 None:intergenic
CTTATGCTGCTGATGAACAA+GGG 0.662325 4_3:+63580077 Msa0655150:CDS
GTTCCTCGAGGTCAAGCTCG+GGG 0.664861 4_3:+63581610 Msa0655150:CDS
GACGAGTCCATAAGTGACCA+AGG 0.666473 4_3:-63582261 None:intergenic
TGGAACCATAGCTATTGTTG+AGG 0.667930 4_3:+63580180 Msa0655150:CDS
TGCAGCAACAACAATGACAC+CGG 0.667957 4_3:-63580926 None:intergenic
GCTATATTAGCTGGTCGGCG+AGG 0.669032 4_3:+63581241 Msa0655150:CDS
GTTTGAACCTCTGAGTGCAG+AGG 0.672181 4_3:-63579460 None:intergenic
ACATACAGGCCATTCAAACA+GGG 0.675696 4_3:-63582560 None:intergenic
TTTGACTCCTGGTCATGATG+CGG 0.676383 4_3:+63581570 Msa0655150:CDS
ATGGACTCGTCAGCTCAAAG+TGG 0.680431 4_3:+63582273 Msa0655150:CDS
AATTTCTCAAGAAGCCCGAG+AGG 0.683150 4_3:+63580566 Msa0655150:CDS
AAGGTCTTTCCAGTTCCTGG+AGG 0.691373 4_3:-63580637 None:intergenic
ATCTGACAATCTCTTGACAG+CGG 0.699497 4_3:-63582361 None:intergenic
ACGCTGTTGGAAGACAAAGA+GGG 0.712100 4_3:+63580821 Msa0655150:CDS
ACGTTAATAGAAAGCCACGT+AGG 0.716810 4_3:+63579364 Msa0655150:five_prime_UTR
ATCAGCAGGAAGGAAGAAGG+GGG 0.718080 4_3:+63579990 Msa0655150:CDS
TAAACTCTGACAGTAGAGCG+CGG 0.727648 4_3:-63582488 None:intergenic
ATACACCAATGACAGCAGCA+GGG 0.728875 4_3:-63580372 None:intergenic
TGGCTAGAGGAAGACCTACG+TGG 0.731437 4_3:-63579378 None:intergenic
AAGGTGACATTAGTTCCTCG+AGG 0.734920 4_3:+63581598 Msa0655150:CDS
CCTCGAATACGACATTCTGG+AGG 0.741604 4_3:-63580104 None:intergenic
ACAGATAAGGAACAACCGTG+AGG 0.756868 4_3:+63582407 Msa0655150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATTGATAAAATTAAAGTA+AGG - chr4_3:63579582-63579601 None:intergenic 15.0%
!! AATATAAATCTATGAAAAAG+AGG - chr4_3:63579668-63579687 None:intergenic 15.0%
!! AACTAATTATATGTTTAACA+GGG - chr4_3:63579762-63579781 None:intergenic 15.0%
!!! ATTTTCTTCATTGAATAATA+AGG + chr4_3:63579928-63579947 Msa0655150:CDS 15.0%
!! GTATGAATATGATTATATTA+CGG + chr4_3:63581009-63581028 Msa0655150:intron 15.0%
!! TGAATGATTAAATTATTGAT+CGG + chr4_3:63581049-63581068 Msa0655150:intron 15.0%
!! AAATAAAAGGAAGAAAAAAT+AGG - chr4_3:63581848-63581867 None:intergenic 15.0%
!!! ATTTTAAAATAACTACATAC+AGG - chr4_3:63582577-63582596 None:intergenic 15.0%
!! GAAATTACTAAAACTAATGA+AGG - chr4_3:63579604-63579623 None:intergenic 20.0%
!!! AAAGAGGTTTTTAGATTAAA+GGG - chr4_3:63579652-63579671 None:intergenic 20.0%
!!! AAAAGAGGTTTTTAGATTAA+AGG - chr4_3:63579653-63579672 None:intergenic 20.0%
!! AATTAATTTACAACCACAAT+TGG + chr4_3:63579724-63579743 Msa0655150:intron 20.0%
!! GAAATAAATAAATCCAATTG+TGG - chr4_3:63579740-63579759 None:intergenic 20.0%
!! CAACTAATTATATGTTTAAC+AGG - chr4_3:63579763-63579782 None:intergenic 20.0%
!! AAGATTAAGACTTCATAATT+TGG + chr4_3:63579792-63579811 Msa0655150:intron 20.0%
!!! TCTCTTTTGTTTAATCTTAT+TGG + chr4_3:63580337-63580356 Msa0655150:CDS 20.0%
!!! CTCTTTTGTTTAATCTTATT+GGG + chr4_3:63580338-63580357 Msa0655150:CDS 20.0%
!! TAATCATTCATAAGCATATA+AGG - chr4_3:63581039-63581058 None:intergenic 20.0%
!! TTGTAACATTTATTTGTACT+TGG + chr4_3:63581538-63581557 Msa0655150:intron 20.0%
!! TAGATACAACTACAATTAAT+TGG + chr4_3:63582021-63582040 Msa0655150:intron 20.0%
!! AATCAAAAGATATTATCGTA+AGG - chr4_3:63582154-63582173 None:intergenic 20.0%
!!! TCTCTCACATTTTACTTTTA+AGG + chr4_3:63579497-63579516 Msa0655150:five_prime_UTR 25.0%
!!! TTCTTTTGAGTTCTATGTTA+TGG + chr4_3:63579625-63579644 Msa0655150:intron 25.0%
! ATTCTCATATAGATCAACTT+TGG - chr4_3:63580161-63580180 None:intergenic 25.0%
!! AAAGTTGATCTATATGAGAA+TGG + chr4_3:63580160-63580179 Msa0655150:CDS 25.0%
! ATAGAATCATCAATCTCTTT+AGG - chr4_3:63581283-63581302 None:intergenic 25.0%
! AAATGTTACAAAACAACTGT+GGG - chr4_3:63581529-63581548 None:intergenic 25.0%
! TAAATGTTACAAAACAACTG+TGG - chr4_3:63581530-63581549 None:intergenic 25.0%
! AAAAAATAGGAGATATGATG+CGG - chr4_3:63581835-63581854 None:intergenic 25.0%
! AAGATATTATCGTAAGGAAT+AGG - chr4_3:63582148-63582167 None:intergenic 25.0%
!! AATTTGAAGCATAATGAAGA+GGG - chr4_3:63582628-63582647 None:intergenic 25.0%
!! AAATTTGAAGCATAATGAAG+AGG - chr4_3:63582629-63582648 None:intergenic 25.0%
! AAGTGGATTTATGAAGGATT+GGG - chr4_3:63579406-63579425 None:intergenic 30.0%
AAATGTGAGAGAAGAATGTA+TGG - chr4_3:63579489-63579508 None:intergenic 30.0%
! CTTCATAATTTGGTTTCAGA+TGG + chr4_3:63579802-63579821 Msa0655150:intron 30.0%
! AGTAGTTCTATTACTGTTTG+TGG - chr4_3:63579864-63579883 None:intergenic 30.0%
AACAGTAATAGAACTACTCT+TGG + chr4_3:63579866-63579885 Msa0655150:CDS 30.0%
TAATAGAACTACTCTTGGTA+AGG + chr4_3:63579871-63579890 Msa0655150:CDS 30.0%
! GAAGATATCTCTTTTCATCA+TGG + chr4_3:63579903-63579922 Msa0655150:CDS 30.0%
!!! ATTTTCCATAAAAGCATCCT+TGG + chr4_3:63579961-63579980 Msa0655150:CDS 30.0%
! AAATTGTTGCTTGGAAATGT+CGG + chr4_3:63580019-63580038 Msa0655150:CDS 30.0%
GTTTCTTGAGTATTTGGATA+AGG + chr4_3:63580126-63580145 Msa0655150:CDS 30.0%
TCATAATGCTCAAGAAGATT+CGG + chr4_3:63580312-63580331 Msa0655150:CDS 30.0%
!! TTTGAAACTTGGCTTTAGAT+TGG - chr4_3:63580468-63580487 None:intergenic 30.0%
! ATCTAAAGCCAAGTTTCAAA+TGG + chr4_3:63580468-63580487 Msa0655150:CDS 30.0%
GAACCTGATATAGAGAAAAA+CGG - chr4_3:63580697-63580716 None:intergenic 30.0%
TTCATACCTGTCTATCAAAT+CGG - chr4_3:63580996-63581015 None:intergenic 30.0%
TATTGTTAGCATGAACCTTT+AGG - chr4_3:63581129-63581148 None:intergenic 30.0%
! GCTGCAGAAGAAATTATTTT+TGG + chr4_3:63581721-63581740 Msa0655150:CDS 30.0%
TGCAATAAGATCCAATCATA+TGG + chr4_3:63582051-63582070 Msa0655150:intron 30.0%
CATTGAAGAAACCATATGAT+TGG - chr4_3:63582065-63582084 None:intergenic 30.0%
ACATCAGAAGAAGATAAGAA+AGG - chr4_3:63582179-63582198 None:intergenic 30.0%
TTTAATGATACTCTTGCAGA+TGG + chr4_3:63582209-63582228 Msa0655150:intron 30.0%
! ACATTTGGAATGTCTGATAT+TGG + chr4_3:63582237-63582256 Msa0655150:CDS 30.0%
! AAATTGCATTGACACAGATA+AGG + chr4_3:63582394-63582413 Msa0655150:CDS 30.0%
CTGAAATTCCAGTTGAAAAT+CGG + chr4_3:63582511-63582530 Msa0655150:CDS 30.0%
TGAAATTCCAGTTGAAAATC+GGG + chr4_3:63582512-63582531 Msa0655150:CDS 30.0%
! ACGTTTGATTCGTTTCACTT+CGG - chr4_3:63579348-63579367 None:intergenic 35.0%
! CAAGTGGATTTATGAAGGAT+TGG - chr4_3:63579407-63579426 None:intergenic 35.0%
! AGCAACAAGTGGATTTATGA+AGG - chr4_3:63579412-63579431 None:intergenic 35.0%
! AAGTGATGATGAAGAAGAGT+TGG - chr4_3:63579439-63579458 None:intergenic 35.0%
ACTCTTGGTAAGGATTTGAA+TGG + chr4_3:63579881-63579900 Msa0655150:CDS 35.0%
! TTGTTCCAAGGATGCTTTTA+TGG - chr4_3:63579969-63579988 None:intergenic 35.0%
TTTCCATTTCCCAATAATGC+CGG - chr4_3:63580055-63580074 None:intergenic 35.0%
TTCGAGGTTTCTTGAGTATT+TGG + chr4_3:63580120-63580139 Msa0655150:CDS 35.0%
! TGAATTTCTGAAGAAGCTCT+TGG - chr4_3:63580267-63580286 None:intergenic 35.0%
AAGAGCTTCTTCAGAAATTC+AGG + chr4_3:63580266-63580285 Msa0655150:CDS 35.0%
AGAGCTTCTTCAGAAATTCA+GGG + chr4_3:63580267-63580286 Msa0655150:CDS 35.0%
CATAATGCTCAAGAAGATTC+GGG + chr4_3:63580313-63580332 Msa0655150:CDS 35.0%
! GTTTGGTTCCATTTGAAACT+TGG - chr4_3:63580479-63580498 None:intergenic 35.0%
TTTCAAATGGAACCAAACAC+TGG + chr4_3:63580481-63580500 Msa0655150:CDS 35.0%
!!! TGACTTTTGATGATGTTGCT+GGG + chr4_3:63580506-63580525 Msa0655150:CDS 35.0%
!! GTTCCGTTTTTCTCTATATC+AGG + chr4_3:63580691-63580710 Msa0655150:CDS 35.0%
TCATCAACAAAGACAATGCA+AGG - chr4_3:63580796-63580815 None:intergenic 35.0%
! TTCTGTCAAAAGTTGGTTGA+GGG - chr4_3:63580884-63580903 None:intergenic 35.0%
! TTTCTGTCAAAAGTTGGTTG+AGG - chr4_3:63580885-63580904 None:intergenic 35.0%
! CAACCAACTTTTGACAGAAA+TGG + chr4_3:63580885-63580904 Msa0655150:CDS 35.0%
CATCCATTTCTGTCAAAAGT+TGG - chr4_3:63580891-63580910 None:intergenic 35.0%
! CAACTTTTGACAGAAATGGA+TGG + chr4_3:63580889-63580908 Msa0655150:CDS 35.0%
!! AGCATGAACCTTTAGGATTT+CGG - chr4_3:63581122-63581141 None:intergenic 35.0%
AATGAAGCTGCTATATTAGC+TGG + chr4_3:63581232-63581251 Msa0655150:CDS 35.0%
TCTATTGATAGAATTGTCGC+TGG + chr4_3:63581298-63581317 Msa0655150:CDS 35.0%
AAGGAACATTAATGACCGAT+GGG + chr4_3:63581326-63581345 Msa0655150:CDS 35.0%
! TAAACTTTTGCTCTTCCCAT+CGG - chr4_3:63581344-63581363 None:intergenic 35.0%
GTAACATTGCAATGAAAGCA+AGG + chr4_3:63581443-63581462 Msa0655150:intron 35.0%
!! AACTGTGGGAATTTTTAGAG+TGG - chr4_3:63581515-63581534 None:intergenic 35.0%
!!! GTTGTTTTGAGATCAGAGTT+GGG - chr4_3:63581663-63581682 None:intergenic 35.0%
!!! TGTTGTTTTGAGATCAGAGT+TGG - chr4_3:63581664-63581683 None:intergenic 35.0%
CAACTCTTTGCAAGAATTGT+TGG + chr4_3:63581682-63581701 Msa0655150:CDS 35.0%
!!! AATTATTTTTGGTGAGCCTG+AGG + chr4_3:63581732-63581751 Msa0655150:CDS 35.0%
! AATTACCTGTCTTGCTATAC+CGG - chr4_3:63581794-63581813 None:intergenic 35.0%
GGCTCATGCTACAAAATAAA+AGG - chr4_3:63581861-63581880 None:intergenic 35.0%
AACGATGATGCAGATTTAGA+AGG + chr4_3:63582120-63582139 Msa0655150:intron 35.0%
CGATGTTATCATGAGAATGA+TGG + chr4_3:63582296-63582315 Msa0655150:CDS 35.0%
TTATCATGAGAATGATGGCA+AGG + chr4_3:63582301-63582320 Msa0655150:CDS 35.0%
CAATCTTATCAATTGCCTCA+CGG - chr4_3:63582425-63582444 None:intergenic 35.0%
TGAGGCAATTGATAAGATTG+TGG + chr4_3:63582425-63582444 Msa0655150:CDS 35.0%
CATAATGAAGAGGGTAACTT+CGG - chr4_3:63582619-63582638 None:intergenic 35.0%
ACGTTAATAGAAAGCCACGT+AGG + chr4_3:63579364-63579383 Msa0655150:five_prime_UTR 40.0%
GATTTATGAAGGATTGGGTG+TGG - chr4_3:63579401-63579420 None:intergenic 40.0%
! TGATGATGAAGAAGAGTTGG+AGG - chr4_3:63579436-63579455 None:intergenic 40.0%
GTGAGAGAAGAATGTATGGA+AGG - chr4_3:63579485-63579504 None:intergenic 40.0%
ATCCTTGGAACAAAATCAGC+AGG + chr4_3:63579976-63579995 Msa0655150:CDS 40.0%
!!! TTCCTGCTGATTTTGTTCCA+AGG - chr4_3:63579981-63580000 None:intergenic 40.0%
TTGGAACAAAATCAGCAGGA+AGG + chr4_3:63579980-63579999 Msa0655150:CDS 40.0%
AAAATCAGCAGGAAGGAAGA+AGG + chr4_3:63579987-63580006 Msa0655150:CDS 40.0%
AAATCAGCAGGAAGGAAGAA+GGG + chr4_3:63579988-63580007 Msa0655150:CDS 40.0%
!! GGGATTCTGAAATTGTTGCT+TGG + chr4_3:63580010-63580029 Msa0655150:CDS 40.0%
CTTATGCTGCTGATGAACAA+GGG + chr4_3:63580077-63580096 Msa0655150:CDS 40.0%
AAACCTCGAATACGACATTC+TGG - chr4_3:63580110-63580129 None:intergenic 40.0%
TGGAACCATAGCTATTGTTG+AGG + chr4_3:63580180-63580199 Msa0655150:CDS 40.0%
TGTCTCCTGAATTGGGAAAT+AGG + chr4_3:63580206-63580225 Msa0655150:CDS 40.0%
TGCAACCTATTTCCCAATTC+AGG - chr4_3:63580214-63580233 None:intergenic 40.0%
CCTGGATTTCCTATGCAATT+CGG + chr4_3:63580442-63580461 Msa0655150:CDS 40.0%
! TTAGATTGGCCGAATTGCAT+AGG - chr4_3:63580454-63580473 None:intergenic 40.0%
TCAAAAGTCACTCCAGTGTT+TGG - chr4_3:63580496-63580515 None:intergenic 40.0%
!!! GTGACTTTTGATGATGTTGC+TGG + chr4_3:63580505-63580524 Msa0655150:CDS 40.0%
!!! GACTTTTGATGATGTTGCTG+GGG + chr4_3:63580507-63580526 Msa0655150:CDS 40.0%
! TGAAGCCAAGCAGGATTTTA+TGG + chr4_3:63580534-63580553 Msa0655150:CDS 40.0%
! CCAACAAGAAGAACTCCTTT+TGG - chr4_3:63580616-63580635 None:intergenic 40.0%
CCAAAAGGAGTTCTTCTTGT+TGG + chr4_3:63580613-63580632 Msa0655150:CDS 40.0%
GAGTTTGTCGAGATGTTTGT+TGG + chr4_3:63580718-63580737 Msa0655150:CDS 40.0%
! GTCGAGATGTTTGTTGGTAT+TGG + chr4_3:63580724-63580743 Msa0655150:CDS 40.0%
TAGCCTTCTTGAACAAGTCA+CGG - chr4_3:63580762-63580781 None:intergenic 40.0%
! GTTGATGAAATTGACGCTGT+TGG + chr4_3:63580808-63580827 Msa0655150:CDS 40.0%
! ACAGAAATGGATGGATTCGA+GGG + chr4_3:63580898-63580917 Msa0655150:CDS 40.0%
! TTGTTGTTGCTGCAACTAAC+AGG + chr4_3:63580935-63580954 Msa0655150:CDS 40.0%
TGTTGTTGCTGCAACTAACA+GGG + chr4_3:63580936-63580955 Msa0655150:CDS 40.0%
TAACGCAGAGTCAAGAATGT+CGG - chr4_3:63580962-63580981 None:intergenic 40.0%
! ATTGATCGGAATGCTTTTGC+AGG + chr4_3:63581063-63581082 Msa0655150:intron 40.0%
! GGTTGATGTTCCAGATGTAA+GGG + chr4_3:63581090-63581109 Msa0655150:CDS 40.0%
GTTGATGTTCCAGATGTAAG+GGG + chr4_3:63581091-63581110 Msa0655150:CDS 40.0%
!!! ATGAGAACACCTGGTTTTAG+CGG + chr4_3:63581187-63581206 Msa0655150:CDS 40.0%
AAGCTGCTATATTAGCTGGT+CGG + chr4_3:63581236-63581255 Msa0655150:CDS 40.0%
TGATAGAATTGTCGCTGGAA+TGG + chr4_3:63581303-63581322 Msa0655150:CDS 40.0%
GAAGGAACATTAATGACCGA+TGG + chr4_3:63581325-63581344 Msa0655150:CDS 40.0%
TGGGAAGAGCAAAAGTTTAG+TGG + chr4_3:63581345-63581364 Msa0655150:CDS 40.0%
TTAGTGGCGTATCATGAAGT+TGG + chr4_3:63581361-63581380 Msa0655150:CDS 40.0%
TAGTGGCGTATCATGAAGTT+GGG + chr4_3:63581362-63581381 Msa0655150:CDS 40.0%
! GCTAGTTTCTTACCCACAAA+TGG - chr4_3:63581392-63581411 None:intergenic 40.0%
! GCAATGAAAGCAAGGTTTTG+TGG + chr4_3:63581451-63581470 Msa0655150:intron 40.0%
CTCTTTGCAAGAATTGTTGG+AGG + chr4_3:63581685-63581704 Msa0655150:CDS 40.0%
GCAAGAATTGTTGGAGGATT+AGG + chr4_3:63581691-63581710 Msa0655150:CDS 40.0%
AGAATTGTTGGAGGATTAGG+TGG + chr4_3:63581694-63581713 Msa0655150:CDS 40.0%
TTGCAGATGGTAGTCACATT+TGG + chr4_3:63582222-63582241 Msa0655150:intron 40.0%
GAATGTCTGATATTGGTCCT+TGG + chr4_3:63582244-63582263 Msa0655150:CDS 40.0%
TATTGGTCCTTGGTCACTTA+TGG + chr4_3:63582254-63582273 Msa0655150:CDS 40.0%
CTCAATGTCAGAAAAGCTTG+CGG + chr4_3:63582326-63582345 Msa0655150:CDS 40.0%
ATCTGACAATCTCTTGACAG+CGG - chr4_3:63582364-63582383 None:intergenic 40.0%
TAAGATTGTGGAAGTCCTTC+TGG + chr4_3:63582437-63582456 Msa0655150:CDS 40.0%
ACATACAGGCCATTCAAACA+GGG - chr4_3:63582563-63582582 None:intergenic 40.0%
TACATACAGGCCATTCAAAC+AGG - chr4_3:63582564-63582583 None:intergenic 40.0%
GCATCATCAGCATGTCTTGT+TGG + chr4_3:63579827-63579846 Msa0655150:CDS 45.0%
AATCAGCAGGAAGGAAGAAG+GGG + chr4_3:63579989-63580008 Msa0655150:CDS 45.0%
TTGCTTGGAAATGTCGGTGT+TGG + chr4_3:63580025-63580044 Msa0655150:CDS 45.0%
!! AAATGTCGGTGTTGGTTTGC+CGG + chr4_3:63580033-63580052 Msa0655150:CDS 45.0%
!! TGTTGGTTTGCCGGCATTAT+TGG + chr4_3:63580042-63580061 Msa0655150:CDS 45.0%
!! GTTGGTTTGCCGGCATTATT+GGG + chr4_3:63580043-63580062 Msa0655150:CDS 45.0%
TTGCCGGCATTATTGGGAAA+TGG + chr4_3:63580049-63580068 Msa0655150:CDS 45.0%
GCTTATGCTGCTGATGAACA+AGG + chr4_3:63580076-63580095 Msa0655150:CDS 45.0%
CACAGCCTCAACAATAGCTA+TGG - chr4_3:63580188-63580207 None:intergenic 45.0%
ATACACCAATGACAGCAGCA+GGG - chr4_3:63580375-63580394 None:intergenic 45.0%
AATACACCAATGACAGCAGC+AGG - chr4_3:63580376-63580395 None:intergenic 45.0%
GTGTATTGTTCCTTCTCTCG+AGG + chr4_3:63580389-63580408 Msa0655150:CDS 45.0%
TATTGTTCCTTCTCTCGAGG+CGG + chr4_3:63580392-63580411 Msa0655150:CDS 45.0%
CCGAATTGCATAGGAAATCC+AGG - chr4_3:63580445-63580464 None:intergenic 45.0%
!!! TTTTGATGATGTTGCTGGGG+TGG + chr4_3:63580510-63580529 Msa0655150:CDS 45.0%
! AGCCAAGCAGGATTTTATGG+AGG + chr4_3:63580537-63580556 Msa0655150:CDS 45.0%
CACCTCCATAAAATCCTGCT+TGG - chr4_3:63580542-63580561 None:intergenic 45.0%
! CAAGCAGGATTTTATGGAGG+TGG + chr4_3:63580540-63580559 Msa0655150:CDS 45.0%
AATTTCTCAAGAAGCCCGAG+AGG + chr4_3:63580566-63580585 Msa0655150:CDS 45.0%
ACCAACAGAAGTGAACCTCT+CGG - chr4_3:63580584-63580603 None:intergenic 45.0%
AACAAGGTCTTTCCAGTTCC+TGG - chr4_3:63580643-63580662 None:intergenic 45.0%
TGGAAAGACCTTGTTAGCCA+AGG + chr4_3:63580648-63580667 Msa0655150:CDS 45.0%
! AGCAATAGCCTTGGCTAACA+AGG - chr4_3:63580659-63580678 None:intergenic 45.0%
TTGTTAGCCAAGGCTATTGC+TGG + chr4_3:63580658-63580677 Msa0655150:CDS 45.0%
!! TGTCCGTGACTTGTTCAAGA+AGG + chr4_3:63580756-63580775 Msa0655150:CDS 45.0%
ACGCTGTTGGAAGACAAAGA+GGG + chr4_3:63580821-63580840 Msa0655150:CDS 45.0%
AGACAAAGAGGGACTGGAAT+TGG + chr4_3:63580832-63580851 Msa0655150:CDS 45.0%
! GACAGAAATGGATGGATTCG+AGG + chr4_3:63580897-63580916 Msa0655150:CDS 45.0%
! GATGGATTCGAGGGAAATAC+CGG + chr4_3:63580907-63580926 Msa0655150:CDS 45.0%
TGCAGCAACAACAATGACAC+CGG - chr4_3:63580929-63580948 None:intergenic 45.0%
! CGGAATGCTTTTGCAGGTAT+CGG + chr4_3:63581069-63581088 Msa0655150:intron 45.0%
! CGGTTGATGTTCCAGATGTA+AGG + chr4_3:63581089-63581108 Msa0655150:CDS 45.0%
ATGTTCCAGATGTAAGGGGA+AGG + chr4_3:63581095-63581114 Msa0655150:CDS 45.0%
GTGATTGCAATGAGAACACC+TGG + chr4_3:63581178-63581197 Msa0655150:CDS 45.0%
AGAATTGTCGCTGGAATGGA+AGG + chr4_3:63581307-63581326 Msa0655150:CDS 45.0%
! AAGTTGGGCATGCCATTTGT+GGG + chr4_3:63581377-63581396 Msa0655150:CDS 45.0%
TTTGACTCCTGGTCATGATG+CGG + chr4_3:63581570-63581589 Msa0655150:CDS 45.0%
! TTTTGTACCGCATCATGACC+AGG - chr4_3:63581580-63581599 None:intergenic 45.0%
TGGTCATGATGCGGTACAAA+AGG + chr4_3:63581579-63581598 Msa0655150:CDS 45.0%
AAGGTGACATTAGTTCCTCG+AGG + chr4_3:63581598-63581617 Msa0655150:CDS 45.0%
TGAGATCAGAGTTGGGTCAT+CGG - chr4_3:63581656-63581675 None:intergenic 45.0%
TTGTTGGAGGATTAGGTGGT+AGG + chr4_3:63581698-63581717 Msa0655150:CDS 45.0%
TGTTGGAGGATTAGGTGGTA+GGG + chr4_3:63581699-63581718 Msa0655150:CDS 45.0%
! GGTGATTTGCAGCAAATCAC+CGG + chr4_3:63581772-63581791 Msa0655150:CDS 45.0%
AATCACCGGTATAGCAAGAC+AGG + chr4_3:63581786-63581805 Msa0655150:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr4_3:63581886-63581905 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr4_3:63581887-63581906 None:intergenic 45.0%
ACAGATAAGGAACAACCGTG+AGG + chr4_3:63582407-63582426 Msa0655150:CDS 45.0%
TAAACTCTGACAGTAGAGCG+CGG - chr4_3:63582491-63582510 None:intergenic 45.0%
ATTCAAACAGGGACTGCTAC+TGG - chr4_3:63582552-63582571 None:intergenic 45.0%
AGTAGCAGTCCCTGTTTGAA+TGG + chr4_3:63582551-63582570 Msa0655150:exon 45.0%
!! ATAATAAAAAAAATAGTTAA+AGG - chr4_3:63582088-63582107 None:intergenic 5.0%
GAGTTGGAGGTAGCAACAAG+TGG - chr4_3:63579423-63579442 None:intergenic 50.0%
TCACTTTCCTCTGCACTCAG+AGG + chr4_3:63579453-63579472 Msa0655150:five_prime_UTR 50.0%
GTTTGAACCTCTGAGTGCAG+AGG - chr4_3:63579463-63579482 None:intergenic 50.0%
ATCAGCAGGAAGGAAGAAGG+GGG + chr4_3:63579990-63580009 Msa0655150:CDS 50.0%
CCTCGAATACGACATTCTGG+AGG - chr4_3:63580107-63580126 None:intergenic 50.0%
CCTCCAGAATGTCGTATTCG+AGG + chr4_3:63580104-63580123 Msa0655150:CDS 50.0%
TGAGGCTGTGTCTCCTGAAT+TGG + chr4_3:63580198-63580217 Msa0655150:CDS 50.0%
GAGGCTGTGTCTCCTGAATT+GGG + chr4_3:63580199-63580218 Msa0655150:CDS 50.0%
! CGTGTTCGAGTTCAACTTCC+TGG + chr4_3:63580235-63580254 Msa0655150:CDS 50.0%
AGAAGCTCTTGGCTAAGTCC+AGG - chr4_3:63580256-63580275 None:intergenic 50.0%
ATAGGAAATCCAGGTCCACC+GGG - chr4_3:63580436-63580455 None:intergenic 50.0%
CATAGGAAATCCAGGTCCAC+CGG - chr4_3:63580437-63580456 None:intergenic 50.0%
CCAACAGAAGTGAACCTCTC+GGG - chr4_3:63580583-63580602 None:intergenic 50.0%
! GTTGGTGCTCGCATTCCAAA+AGG + chr4_3:63580598-63580617 Msa0655150:CDS 50.0%
GTTCTTCTTGTTGGTCCTCC+AGG + chr4_3:63580622-63580641 Msa0655150:CDS 50.0%
AAGGTCTTTCCAGTTCCTGG+AGG - chr4_3:63580640-63580659 None:intergenic 50.0%
AGCTTCACCAGCAATAGCCT+TGG - chr4_3:63580668-63580687 None:intergenic 50.0%
AAGGCTATTGCTGGTGAAGC+TGG + chr4_3:63580667-63580686 Msa0655150:CDS 50.0%
GACGCTGTTGGAAGACAAAG+AGG + chr4_3:63580820-63580839 Msa0655150:CDS 50.0%
GTTGGAAGACAAAGAGGGAC+TGG + chr4_3:63580826-63580845 Msa0655150:CDS 50.0%
CAAAGAGGGACTGGAATTGG+TGG + chr4_3:63580835-63580854 Msa0655150:CDS 50.0%
GACTCTGCGTTATTGAGACC+AGG + chr4_3:63580970-63580989 Msa0655150:CDS 50.0%
!! ACCAGGCCGATTTGATAGAC+AGG + chr4_3:63580987-63581006 Msa0655150:CDS 50.0%
ACCTGTCTATCAAATCGGCC+TGG - chr4_3:63580991-63581010 None:intergenic 50.0%
GGGAAGGACCGAAATCCTAA+AGG + chr4_3:63581111-63581130 Msa0655150:CDS 50.0%
AGATCAGCTCCGCTAAAACC+AGG - chr4_3:63581199-63581218 None:intergenic 50.0%
! GAAGTTGGGCATGCCATTTG+TGG + chr4_3:63581376-63581395 Msa0655150:CDS 50.0%
GGTTGCAGAACTTTGACTCC+TGG + chr4_3:63581559-63581578 Msa0655150:intron 50.0%
TAGTTCCTCGAGGTCAAGCT+CGG + chr4_3:63581608-63581627 Msa0655150:CDS 50.0%
ATCAGAGTTGGGTCATCGGA+AGG - chr4_3:63581652-63581671 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr4_3:63581882-63581901 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr4_3:63581888-63581907 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr4_3:63581885-63581904 Msa0655150:intron 50.0%
GACGAGTCCATAAGTGACCA+AGG - chr4_3:63582264-63582283 None:intergenic 50.0%
ATGGACTCGTCAGCTCAAAG+TGG + chr4_3:63582273-63582292 Msa0655150:CDS 50.0%
! TGTGGAAGTCCTTCTGGAGA+AGG + chr4_3:63582443-63582462 Msa0655150:CDS 50.0%
TCAACGTCTCCTTCTCCAGA+AGG - chr4_3:63582455-63582474 None:intergenic 50.0%
! GGAGGAACCCGATTTTCAAC+TGG - chr4_3:63582522-63582541 None:intergenic 50.0%
ACTGCTACTGGAGTTGAAGG+AGG - chr4_3:63582540-63582559 None:intergenic 50.0%
TGGCTAGAGGAAGACCTACG+TGG - chr4_3:63579381-63579400 None:intergenic 55.0%
GAAGGATTGGGTGTGGCTAG+AGG - chr4_3:63579394-63579413 None:intergenic 55.0%
GCTTTCCCTGCTGCTGTCAT+TGG + chr4_3:63580367-63580386 Msa0655150:CDS 55.0%
CCCGAGAGGTTCACTTCTGT+TGG + chr4_3:63580580-63580599 Msa0655150:CDS 55.0%
CTTGTTGGTCCTCCAGGAAC+TGG + chr4_3:63580628-63580647 Msa0655150:CDS 55.0%
AGAGGGACTGGAATTGGTGG+AGG + chr4_3:63580838-63580857 Msa0655150:CDS 55.0%
GAGGGACTGGAATTGGTGGA+GGG + chr4_3:63580839-63580858 Msa0655150:CDS 55.0%
TCGGTCCTTCCCCTTACATC+TGG - chr4_3:63581103-63581122 None:intergenic 55.0%
GCTATATTAGCTGGTCGGCG+AGG + chr4_3:63581241-63581260 Msa0655150:CDS 55.0%
TATTAGCTGGTCGGCGAGGA+AGG + chr4_3:63581245-63581264 Msa0655150:CDS 55.0%
AGTTCCTCGAGGTCAAGCTC+GGG + chr4_3:63581609-63581628 Msa0655150:CDS 55.0%
GTCAAGCTCGGGGTCTTACA+TGG + chr4_3:63581620-63581639 Msa0655150:CDS 55.0%
GGTGAGCCTGAGGTTACAAC+TGG + chr4_3:63581742-63581761 Msa0655150:CDS 55.0%
CCTGCACCAGTTGTAACCTC+AGG - chr4_3:63581751-63581770 None:intergenic 55.0%
CCTGAGGTTACAACTGGTGC+AGG + chr4_3:63581748-63581767 Msa0655150:CDS 55.0%
GAGGTTACAACTGGTGCAGG+TGG + chr4_3:63581751-63581770 Msa0655150:CDS 55.0%
ATGAGCCGACCCCACTTAGT+GGG + chr4_3:63581874-63581893 Msa0655150:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr4_3:63581880-63581899 Msa0655150:intron 55.0%
CTGGAGAAGGAGACGTTGAG+TGG + chr4_3:63582456-63582475 Msa0655150:CDS 55.0%
GGGACTGCTACTGGAGTTGA+AGG - chr4_3:63582543-63582562 None:intergenic 55.0%
TTCCTTCTCTCGAGGCGGTC+CGG + chr4_3:63580397-63580416 Msa0655150:CDS 60.0%
TGGGGTGGATGAAGCCAAGC+AGG + chr4_3:63580525-63580544 Msa0655150:CDS 60.0%
GTTCCTCGAGGTCAAGCTCG+GGG + chr4_3:63581610-63581629 Msa0655150:CDS 60.0%
CATGAGCCGACCCCACTTAG+TGG + chr4_3:63581873-63581892 Msa0655150:intron 60.0%
TCGAGGCGGTCCGGTGGAAT+GGG + chr4_3:63580406-63580425 Msa0655150:CDS 65.0%
TCCGGTGGAATGGGAGGTCC+CGG + chr4_3:63580415-63580434 Msa0655150:CDS 65.0%
ACCGGGACCTCCCATTCCAC+CGG - chr4_3:63580419-63580438 None:intergenic 65.0%
CTGGTCGGCGAGGAAGGACA+GGG + chr4_3:63581251-63581270 Msa0655150:CDS 65.0%
AGACCCCGAGCTTGACCTCG+AGG - chr4_3:63581616-63581635 None:intergenic 65.0%
CACCGGACCGCCTCGAGAGA+AGG - chr4_3:63580402-63580421 None:intergenic 70.0%
CTTCTCTCGAGGCGGTCCGG+TGG + chr4_3:63580400-63580419 Msa0655150:CDS 70.0%
CTCGAGGCGGTCCGGTGGAA+TGG + chr4_3:63580405-63580424 Msa0655150:CDS 70.0%
AGGCGGTCCGGTGGAATGGG+AGG + chr4_3:63580409-63580428 Msa0655150:CDS 70.0%
GGTGGAATGGGAGGTCCCGG+TGG + chr4_3:63580418-63580437 Msa0655150:CDS 70.0%
ATGGGAGGTCCCGGTGGACC+TGG + chr4_3:63580424-63580443 Msa0655150:CDS 70.0%
GCTGGTCGGCGAGGAAGGAC+AGG + chr4_3:63581250-63581269 Msa0655150:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 63579345 63582757 63579345 ID=Msa0655150;Name=Msa0655150
chr4_3 mRNA 63579345 63582757 63579345 ID=Msa0655150-mRNA-1;Parent=Msa0655150;Name=Msa0655150-mRNA-1;_AED=0.06;_eAED=0.06;_QI=174|1|1|1|0.6|0.5|6|167|694
chr4_3 exon 63579345 63579518 63579345 ID=Msa0655150-mRNA-1:exon:17821;Parent=Msa0655150-mRNA-1
chr4_3 exon 63579821 63581008 63579821 ID=Msa0655150-mRNA-1:exon:17822;Parent=Msa0655150-mRNA-1
chr4_3 exon 63581085 63581398 63581085 ID=Msa0655150-mRNA-1:exon:17823;Parent=Msa0655150-mRNA-1
chr4_3 exon 63581567 63581807 63581567 ID=Msa0655150-mRNA-1:exon:17824;Parent=Msa0655150-mRNA-1
chr4_3 exon 63582228 63582583 63582228 ID=Msa0655150-mRNA-1:exon:17825;Parent=Msa0655150-mRNA-1
chr4_3 exon 63582605 63582757 63582605 ID=Msa0655150-mRNA-1:exon:17826;Parent=Msa0655150-mRNA-1
chr4_3 five_prime_UTR 63579345 63579518 63579345 ID=Msa0655150-mRNA-1:five_prime_utr;Parent=Msa0655150-mRNA-1
chr4_3 CDS 63579821 63581008 63579821 ID=Msa0655150-mRNA-1:cds;Parent=Msa0655150-mRNA-1
chr4_3 CDS 63581085 63581398 63581085 ID=Msa0655150-mRNA-1:cds;Parent=Msa0655150-mRNA-1
chr4_3 CDS 63581567 63581807 63581567 ID=Msa0655150-mRNA-1:cds;Parent=Msa0655150-mRNA-1
chr4_3 CDS 63582228 63582569 63582228 ID=Msa0655150-mRNA-1:cds;Parent=Msa0655150-mRNA-1
chr4_3 three_prime_UTR 63582570 63582583 63582570 ID=Msa0655150-mRNA-1:three_prime_utr;Parent=Msa0655150-mRNA-1
chr4_3 three_prime_UTR 63582605 63582757 63582605 ID=Msa0655150-mRNA-1:three_prime_utr;Parent=Msa0655150-mRNA-1
Gene Sequence

>Msa0655150

ATGGCAGCATCATCAGCATGTCTTGTTGGTAATGCTTTATCCACAAACAGTAATAGAACTACTCTTGGTAAGGATTTGAATGGAAGATATCTCTTTTCATCATGGAGATTTTCTTCATTGAATAATAAGGCATCAAAATCATTTTCCATAAAAGCATCCTTGGAACAAAATCAGCAGGAAGGAAGAAGGGGGATTCTGAAATTGTTGCTTGGAAATGTCGGTGTTGGTTTGCCGGCATTATTGGGAAATGGAAAAGCTTATGCTGCTGATGAACAAGGGTCGTCCTCCAGAATGTCGTATTCGAGGTTTCTTGAGTATTTGGATAAGGATAGAGTTACCAAAGTTGATCTATATGAGAATGGAACCATAGCTATTGTTGAGGCTGTGTCTCCTGAATTGGGAAATAGGTTGCAGCGTGTTCGAGTTCAACTTCCTGGACTTAGCCAAGAGCTTCTTCAGAAATTCAGGGAAAAGAACATTGACTTTGCAGCTCATAATGCTCAAGAAGATTCGGGTTCTCTTTTGTTTAATCTTATTGGGAATCTTGCTTTCCCTGCTGCTGTCATTGGTGTATTGTTCCTTCTCTCGAGGCGGTCCGGTGGAATGGGAGGTCCCGGTGGACCTGGATTTCCTATGCAATTCGGCCAATCTAAAGCCAAGTTTCAAATGGAACCAAACACTGGAGTGACTTTTGATGATGTTGCTGGGGTGGATGAAGCCAAGCAGGATTTTATGGAGGTGGTTGAATTTCTCAAGAAGCCCGAGAGGTTCACTTCTGTTGGTGCTCGCATTCCAAAAGGAGTTCTTCTTGTTGGTCCTCCAGGAACTGGAAAGACCTTGTTAGCCAAGGCTATTGCTGGTGAAGCTGGTGTTCCGTTTTTCTCTATATCAGGTTCTGAGTTTGTCGAGATGTTTGTTGGTATTGGTGCTTCTCGTGTCCGTGACTTGTTCAAGAAGGCTAAAGAGAATGCTCCTTGCATTGTCTTTGTTGATGAAATTGACGCTGTTGGAAGACAAAGAGGGACTGGAATTGGTGGAGGGAATGACGAAAGAGAACAGACCCTCAACCAACTTTTGACAGAAATGGATGGATTCGAGGGAAATACCGGTGTCATTGTTGTTGCTGCAACTAACAGGGCCGACATTCTTGACTCTGCGTTATTGAGACCAGGCCGATTTGATAGACAGGTATCGGTTGATGTTCCAGATGTAAGGGGAAGGACCGAAATCCTAAAGGTTCATGCTAACAATAAAAAATTTGATAATGATGTTTCTCTTGAAGTGATTGCAATGAGAACACCTGGTTTTAGCGGAGCTGATCTTGCAAATCTCTTGAATGAAGCTGCTATATTAGCTGGTCGGCGAGGAAGGACAGGGATTTCACCTAAAGAGATTGATGATTCTATTGATAGAATTGTCGCTGGAATGGAAGGAACATTAATGACCGATGGGAAGAGCAAAAGTTTAGTGGCGTATCATGAAGTTGGGCATGCCATTTGTGGAACTTTGACTCCTGGTCATGATGCGGTACAAAAGGTGACATTAGTTCCTCGAGGTCAAGCTCGGGGTCTTACATGGTTCATTCCTTCCGATGACCCAACTCTGATCTCAAAACAACAACTCTTTGCAAGAATTGTTGGAGGATTAGGTGGTAGGGCTGCAGAAGAAATTATTTTTGGTGAGCCTGAGGTTACAACTGGTGCAGGTGGTGATTTGCAGCAAATCACCGGTATAGCAAGACAGATGGTAGTCACATTTGGAATGTCTGATATTGGTCCTTGGTCACTTATGGACTCGTCAGCTCAAAGTGGCGATGTTATCATGAGAATGATGGCAAGGAACTCAATGTCAGAAAAGCTTGCGGAAGACATTGATACCGCTGTCAAGAGATTGTCAGATGAAGCATATGAAATTGCATTGACACAGATAAGGAACAACCGTGAGGCAATTGATAAGATTGTGGAAGTCCTTCTGGAGAAGGAGACGTTGAGTGGAGATGAATTCCGCGCTCTACTGTCAGAGTTTACTGAAATTCCAGTTGAAAATCGGGTTCCTCCTTCAACTCCAGTAGCAGTCCCTGTTTGA
Protein sequence

>Msa0655150

MAASSACLVGNALSTNSNRTTLGKDLNGRYLFSSWRFSSLNNKASKSFSIKASLEQNQQEGRRGILKLLLGNVGVGLPALLGNGKAYAADEQGSSSRMSYSRFLEYLDKDRVTKVDLYENGTIAIVEAVSPELGNRLQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPAAVIGVLFLLSRRSGGMGGPGGPGFPMQFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTSVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGIGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHANNKKFDNDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGRTGISPKEIDDSIDRIVAGMEGTLMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGEPEVTTGAGGDLQQITGIARQMVVTFGMSDIGPWSLMDSSAQSGDVIMRMMARNSMSEKLAEDIDTAVKRLSDEAYEIALTQIRNNREAIDKIVEVLLEKETLSGDEFRALLSEFTEIPVENRVPPSTPVAVPV*