AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0668900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0668900 MtrunA17_Chr4g0007641 91.882 850 62 2 1 850 1 843 0.0 1563
Msa0668900 MtrunA17_Chr6g0484831 79.906 851 154 6 1 850 1 835 0.0 1369
Msa0668900 MtrunA17_Chr7g0215341 78.613 851 157 6 1 850 1 827 0.0 1335
Msa0668900 MtrunA17_Chr5g0406641 79.176 850 161 6 1 849 1 835 0.0 1326
Msa0668900 MtrunA17_Chr6g0464681 66.251 883 208 11 1 850 1 826 0.0 1123
Msa0668900 MtrunA17_Chr6g0486931 55.159 785 328 8 65 834 142 917 0.0 872
Msa0668900 MtrunA17_Chr8g0369361 50.000 782 358 8 69 833 9 774 0.0 776
Msa0668900 MtrunA17_Chr5g0427891 57.143 343 146 1 492 834 1 342 1.58e-135 407
Msa0668900 MtrunA17_Chr2g0302601 34.383 381 206 8 452 822 1215 1561 9.72e-59 218
Msa0668900 MtrunA17_Chr4g0017221 34.726 383 200 9 452 821 1190 1535 2.98e-57 214
Msa0668900 MtrunA17_Chr6g0477371 34.211 380 206 8 452 821 1206 1551 3.84e-57 213
Msa0668900 MtrunA17_Chr8g0364091 44.505 182 85 6 137 308 37 212 9.21e-37 139
Msa0668900 MtrunA17_Chr8g0364111 74.242 66 17 0 768 833 3 68 2.63e-27 106
Msa0668900 MtrunA17_Chr5g0427881 60.000 65 26 0 403 467 39 103 5.02e-22 91.7
Msa0668900 MtrunA17_Chr3g0087051 35.503 169 85 4 661 821 2 154 6.04e-22 93.2
Msa0668900 MtrunA17_Chr5g0427871 45.370 108 50 3 65 163 34 141 7.06e-22 92.8
Msa0668900 MtrunA17_Chr2g0306841 35.556 90 58 0 567 656 15 104 3.08e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0668900 AT1G69770.1 51.829 820 347 14 47 830 17 824 0.0 810
Msa0668900 AT4G19020.2 49.571 815 372 11 39 833 438 1233 0.0 790
Msa0668900 AT1G80740.1 50.554 813 345 11 50 837 5 785 0.0 790
Msa0668900 AT4G19020.1 49.571 815 372 11 39 833 486 1281 0.0 790
Msa0668900 AT4G14140.3 36.096 374 207 8 452 821 1168 1513 1.12e-58 219
Msa0668900 AT4G14140.1 36.096 374 207 8 452 821 1168 1513 1.12e-58 219
Msa0668900 AT4G14140.2 36.096 374 207 8 452 821 1194 1539 1.94e-58 218
Msa0668900 AT4G08990.1 35.401 387 216 9 441 821 1148 1506 1.69e-56 212
Msa0668900 AT5G49160.1 35.389 373 205 10 452 818 1183 1525 3.74e-55 208
Msa0668900 AT5G49160.2 35.925 373 203 11 452 818 1095 1437 3.99e-55 207
Msa0668900 AT4G13610.1 34.615 390 203 10 441 821 1057 1403 1.15e-53 203

Find 197 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTTATTAGATTTGTATTC+TGG 0.139185 4_4:-10211088 Msa0668900:CDS
GAAATTCGCTGGTGGGTATC+TGG 0.159704 4_4:-10209679 Msa0668900:CDS
TCATCGTTATTTAACTTATA+TGG 0.198097 4_4:+10208587 None:intergenic
CCAAAACATACATGAGTTTC+AGG 0.222977 4_4:+10210850 None:intergenic
AGCAGTCTCGCTTTCTATTC+TGG 0.233443 4_4:+10211228 None:intergenic
TTCTCCATCAATATATATTT+AGG 0.241682 4_4:+10209717 None:intergenic
TCTTGGCTTGAAAATGAAAA+TGG 0.247732 4_4:+10207052 None:intergenic
TAAATAAACTCACTTGTTCT+TGG 0.256392 4_4:+10212617 None:intergenic
AGATATGGAACCTTCTTCTT+TGG 0.258574 4_4:+10208542 None:intergenic
ACGATGAGGCCAACGAGTTT+TGG 0.261615 4_4:+10212644 None:intergenic
ATGTCCACTGGCCTTTGTTT+TGG 0.262234 4_4:-10211055 Msa0668900:CDS
TCTACAATTTCAAGTGAATC+TGG 0.270615 4_4:-10211187 Msa0668900:CDS
AAGACAACTTGGATACTTAA+AGG 0.290097 4_4:+10207165 None:intergenic
ACAAATTTCATCGCATAATC+CGG 0.322892 4_4:+10208255 None:intergenic
CCAGATTGCTATAAACTTTG+TGG 0.326211 4_4:-10207675 Msa0668900:CDS
ATAACCTGGTTGTGAGGTTC+TGG 0.329152 4_4:+10208071 None:intergenic
TATTAACAAGCACACCCTTT+AGG 0.331476 4_4:+10208425 None:intergenic
CAACCAGCTCACAGTGTAAC+TGG 0.332573 4_4:+10213088 None:intergenic
ATCTGACTCTGAGGTATTTG+AGG 0.339615 4_4:-10210574 Msa0668900:CDS
CTAAAATTAAAGAATCTGAT+AGG 0.352290 4_4:-10211117 Msa0668900:CDS
GCTTGCCCCAGCGTTGTACC+TGG 0.360590 4_4:-10209202 Msa0668900:CDS
CTTTATTAGATTTGTATTCT+GGG 0.360910 4_4:-10211087 Msa0668900:CDS
GAAAGAGTGTATCTGAAATC+TGG 0.362870 4_4:-10208373 Msa0668900:CDS
TTCAATCTTTACCGTATCTT+CGG 0.365889 4_4:+10211739 None:intergenic
TGGCTCCCATGTATCATAAC+TGG 0.370498 4_4:+10210190 None:intergenic
GAAGCCTAAATATATATTGA+TGG 0.373783 4_4:-10209721 Msa0668900:CDS
AGTTACACTGTGAGCTGGTT+GGG 0.378676 4_4:-10213086 Msa0668900:five_prime_UTR
GGTCAAGCTGATTTCATTTG+TGG 0.380278 4_4:-10209858 Msa0668900:CDS
TTAGTGGTTTCAATCGCTTT+AGG 0.380660 4_4:-10209815 Msa0668900:CDS
AAATTCGCTGGTGGGTATCT+GGG 0.401492 4_4:-10209678 Msa0668900:CDS
GTAAGAACTCTGTCTTGCTT+TGG 0.411012 4_4:+10207729 None:intergenic
TTCCAGAGTTTGAATACTCT+TGG 0.413434 4_4:+10207035 None:intergenic
AGACAACTTGGATACTTAAA+GGG 0.415659 4_4:+10207166 None:intergenic
TTGGCTTCATCGACCGGAAA+AGG 0.415747 4_4:+10212663 None:intergenic
CACATTAAATATTCACACTT+TGG 0.416932 4_4:-10206981 Msa0668900:three_prime_UTR
CGTACGGCCTTCCTCAGTTT+CGG 0.417102 4_4:-10209587 Msa0668900:CDS
GATAATAATGTGGCTGAAGA+AGG 0.423291 4_4:-10211145 Msa0668900:CDS
TGTCATAATGCAGGAAATTA+CGG 0.427063 4_4:-10209253 Msa0668900:intron
GCTGAATACAACAGGCCATT+TGG 0.427862 4_4:-10208137 Msa0668900:intron
CATGCATTATCAAGCTAGAA+TGG 0.430331 4_4:-10209628 Msa0668900:CDS
GAAAGCTGCGCAACGATCTT+CGG 0.430396 4_4:-10212721 Msa0668900:CDS
CCACAAAGTTTATAGCAATC+TGG 0.432209 4_4:+10207675 None:intergenic
TCGAGAGAATGCAAGGCTAC+AGG 0.432318 4_4:-10207703 Msa0668900:CDS
CCCCATCAACATTCACTTCA+CGG 0.438946 4_4:+10212478 None:intergenic
TTAGATTTGTATTCTGGGTG+TGG 0.441710 4_4:-10211082 Msa0668900:CDS
TGTGAGAAGTTTGTTCTGAA+TGG 0.441943 4_4:-10210675 Msa0668900:CDS
GTGATGATGAAAAGAGTTAT+GGG 0.446587 4_4:-10209039 Msa0668900:CDS
TCTGAAATCTGGGAAGCCTT+TGG 0.448836 4_4:-10208362 Msa0668900:intron
GTTCCTGTGGGCCTTGCCCT+CGG 0.450192 4_4:-10207247 Msa0668900:CDS
CAAGCTGATTTCATTTGTGG+TGG 0.453980 4_4:-10209855 Msa0668900:CDS
ATGAAAGAATTTGTCACTAA+AGG 0.456848 4_4:-10210025 Msa0668900:CDS
TTGCCTCATTCCAAAGAAGA+AGG 0.460877 4_4:-10208552 Msa0668900:intron
GTATACCTCAAGCCCTCAAT+TGG 0.466800 4_4:+10210170 None:intergenic
AGTGATGATGAAAAGAGTTA+TGG 0.467519 4_4:-10209040 Msa0668900:CDS
GAACCTTCTTCTTTGGAATG+AGG 0.469060 4_4:+10208549 None:intergenic
ATTTAACAGCAATTGTAAAG+AGG 0.474358 4_4:-10210050 Msa0668900:intron
ACAGGCCATTTGGTCGACTT+TGG 0.475021 4_4:-10208127 Msa0668900:intron
AATCGTCGAAGAAGAAGAAC+TGG 0.476793 4_4:-10212778 Msa0668900:CDS
GAACTCTGTCTTGCTTTGGA+TGG 0.480776 4_4:+10207733 None:intergenic
CCTTGCCCTCGGATACACAC+TGG 0.484530 4_4:-10207236 Msa0668900:CDS
CAGTTACACTGTGAGCTGGT+TGG 0.487255 4_4:-10213087 Msa0668900:five_prime_UTR
CTACAATTTCAAGTGAATCT+GGG 0.489954 4_4:-10211186 Msa0668900:CDS
GGCAAACTTCAGGGACCTAA+AGG 0.491099 4_4:-10208440 Msa0668900:CDS
CTTGCCCTCGGATACACACT+GGG 0.492440 4_4:-10207235 Msa0668900:CDS
AGCCAAGAGTATTCAAACTC+TGG 0.494156 4_4:-10207037 Msa0668900:three_prime_UTR
TGATACATGGGAGCCAATTG+AGG 0.494303 4_4:-10210183 Msa0668900:CDS
TACCGTGAAGTGAATGTTGA+TGG 0.495325 4_4:-10212480 Msa0668900:CDS
AGAATGGGAATGATGGCTGC+AGG 0.497284 4_4:-10209612 Msa0668900:CDS
AAACTCTGGAATTGTATGAA+TGG 0.497426 4_4:-10207023 Msa0668900:three_prime_UTR
TATCCGAGGGCAAGGCCCAC+AGG 0.498141 4_4:+10207244 None:intergenic
AGACTATATTGCTGCAATTG+TGG 0.501513 4_4:-10211819 Msa0668900:CDS
ATTTGTCACTAAAGGATATG+AGG 0.501542 4_4:-10210017 Msa0668900:CDS
GCCATTTGGTCGACTTTGGT+GGG 0.501789 4_4:-10208123 Msa0668900:CDS
AAAGAGTGTATCTGAAATCT+GGG 0.501903 4_4:-10208372 Msa0668900:CDS
CCTGGTTGTGAGGTTCTGGC+CGG 0.503821 4_4:+10208075 None:intergenic
CACATTATTATCACTTGCAC+AGG 0.504256 4_4:+10211156 None:intergenic
CGTCACCCAGGTACAACGCT+GGG 0.505362 4_4:+10209196 None:intergenic
TAATAAGAATAAAGTGGAGT+TGG 0.507206 4_4:-10208407 Msa0668900:CDS
GGGTGTGGAGCTATGTCCAC+TGG 0.507514 4_4:-10211067 Msa0668900:CDS
ATGATGGCTGCAGGGTCGTA+CGG 0.507692 4_4:-10209603 Msa0668900:CDS
GACTTTGAAGAGGTGGGCTG+TGG 0.510373 4_4:-10210914 Msa0668900:intron
TATCTCTGAAAATCAGTATG+AGG 0.512002 4_4:+10209010 None:intergenic
ACACTGGGTTTAGCAATTCA+AGG 0.513390 4_4:-10207220 Msa0668900:CDS
GATACATGGGAGCCAATTGA+GGG 0.513471 4_4:-10210182 Msa0668900:CDS
TTAGCTGTAGTTGATGATGA+TGG 0.513567 4_4:-10207133 Msa0668900:CDS
ATGACTCCAGTTATGATACA+TGG 0.517212 4_4:-10210196 Msa0668900:CDS
GGCCATTTGGTCGACTTTGG+TGG 0.517220 4_4:-10208124 Msa0668900:CDS
ATCTTTCAGGTGCAGTGGAA+GGG 0.518544 4_4:-10210221 Msa0668900:intron
GCTTGTTAATAAGAATAAAG+TGG 0.518752 4_4:-10208413 Msa0668900:CDS
TTGGGGAGCTCTTCCTACCC+AGG 0.520780 4_4:-10209550 Msa0668900:intron
AAAGGACGGGCAAGACAACT+TGG 0.522582 4_4:+10207154 None:intergenic
TTAGCAATTCAAGGACGCTC+TGG 0.523304 4_4:-10207211 Msa0668900:CDS
GTCTCGCTTTCTATTCTGGA+AGG 0.523813 4_4:+10211232 None:intergenic
TCATCATCAACTACAGCTAA+AGG 0.523999 4_4:+10207136 None:intergenic
TAATGCAGGTACATACAAGT+TGG 0.525057 4_4:-10207283 Msa0668900:intron
AATCTTTCAGGTGCAGTGGA+AGG 0.527731 4_4:-10210222 Msa0668900:intron
TGCAGGTTATCAAGAACCAT+GGG 0.527796 4_4:-10211645 Msa0668900:intron
TCCCACCAAAGTCGACCAAA+TGG 0.528934 4_4:+10208122 None:intergenic
CGAGAGAATGCAAGGCTACA+GGG 0.529397 4_4:-10207702 Msa0668900:CDS
TATATCAGATTAAAGAGAAG+TGG 0.529928 4_4:-10208989 Msa0668900:intron
ATGCATTATCAAGCTAGAAT+GGG 0.531010 4_4:-10209627 Msa0668900:CDS
TTAAAGAATCTGATAGGGAG+TGG 0.532218 4_4:-10211111 Msa0668900:CDS
TCAAGCTAGAATGGGAATGA+TGG 0.534324 4_4:-10209619 Msa0668900:CDS
TAAAATTAAAGAATCTGATA+GGG 0.534696 4_4:-10211116 Msa0668900:CDS
TTTCCAGTTACACTGTGAGC+TGG 0.535330 4_4:-10213091 Msa0668900:five_prime_UTR
AATGCGGTTGCTGTTCCTGT+GGG 0.537648 4_4:-10207259 Msa0668900:CDS
ATTATCACTTGCACAGGCGT+TGG 0.541418 4_4:+10211162 None:intergenic
CTCGATTCAACCTCATGAGT+TGG 0.541627 4_4:+10209392 None:intergenic
GGGATCTCGTTGATGAAAAG+AGG 0.547769 4_4:-10211624 Msa0668900:CDS
AGATACACTCTTTCAACAGA+GGG 0.551050 4_4:+10208382 None:intergenic
AATGTTGTTCAGGGAGAAGA+GGG 0.552118 4_4:-10211848 Msa0668900:intron
GGAAAAGACATGAATTAATG+AGG 0.552426 4_4:+10207094 None:intergenic
TTCTGTCGAGAAGGAAGTGA+CGG 0.552521 4_4:+10212744 None:intergenic
CATTCTAGCTTGATAATGCA+TGG 0.554948 4_4:+10209629 None:intergenic
GAATGTTGTTCAGGGAGAAG+AGG 0.555164 4_4:-10211849 Msa0668900:intron
CTTGCCCCAGCGTTGTACCT+GGG 0.556613 4_4:-10209201 Msa0668900:CDS
GCAAACTTCAGGGACCTAAA+GGG 0.558745 4_4:-10208439 Msa0668900:CDS
AAAGAAACCTAAGAAATCTC+CGG 0.559419 4_4:-10212808 Msa0668900:CDS
TTTGTGGCCCTATAAAAGAA+AGG 0.560000 4_4:-10207659 Msa0668900:intron
TTATAATCTTTCAGGTGCAG+TGG 0.561163 4_4:-10210226 Msa0668900:intron
TGAGTTGGTAGCGGATATGA+AGG 0.564641 4_4:+10209407 None:intergenic
TATCTGGGGCGTTATGCTGT+AGG 0.564853 4_4:-10209663 Msa0668900:CDS
TGATCATACAGCAGACCACT+TGG 0.567396 4_4:+10208614 None:intergenic
CTGGTTGTGAGGTTCTGGCC+GGG 0.572588 4_4:+10208076 None:intergenic
TGCTGACATTAAGCTTGTCA+CGG 0.573436 4_4:-10211023 Msa0668900:intron
ATCAACTACAGCTAAAGGAC+GGG 0.574319 4_4:+10207141 None:intergenic
GTAGCGAGACTTACAGGAAG+AGG 0.577600 4_4:+10209983 None:intergenic
GTGGTCTGCTGTATGATCAC+AGG 0.579654 4_4:-10208610 Msa0668900:CDS
TAGCCTTGCATTCTCTCGAA+TGG 0.582798 4_4:+10207707 None:intergenic
TTACCATTCGAGAGAATGCA+AGG 0.584921 4_4:-10207710 Msa0668900:CDS
CAAATTTCATCGCATAATCC+GGG 0.586118 4_4:+10208256 None:intergenic
CCGGCCAGAACCTCACAACC+AGG 0.586455 4_4:-10208075 Msa0668900:intron
TTGAATGCTTGTGAAGAGGC+TGG 0.588478 4_4:-10210630 Msa0668900:CDS
GGGAGCCAATTGAGGGCTTG+AGG 0.588756 4_4:-10210175 Msa0668900:intron
GCAGCTTTCTTCTGTCGAGA+AGG 0.589725 4_4:+10212735 None:intergenic
AAATGCGGTTGCTGTTCCTG+TGG 0.590835 4_4:-10207260 Msa0668900:CDS
CCAGTGTGTATCCGAGGGCA+AGG 0.592139 4_4:+10207236 None:intergenic
ACCACTAATCCCTTGACAAG+GGG 0.596723 4_4:+10209830 None:intergenic
TGATGGGGTCATATATAAGC+TGG 0.598505 4_4:-10212463 Msa0668900:CDS
TTCTTAACTAAACAATCAAG+AGG 0.600504 4_4:+10211571 None:intergenic
TTGTGTCCACAGTTGTGACC+CGG 0.601223 4_4:-10208094 Msa0668900:CDS
GCGTCACCCAGGTACAACGC+TGG 0.605573 4_4:+10209195 None:intergenic
ACCGTGAAGTGAATGTTGAT+GGG 0.606281 4_4:-10212479 Msa0668900:CDS
TGATTTGAATGCTTGTGAAG+AGG 0.606577 4_4:-10210634 Msa0668900:CDS
GGAAGAAATCAAGATAACAA+TGG 0.607172 4_4:+10207073 None:intergenic
CTAAACCCAGTGTGTATCCG+AGG 0.609698 4_4:+10207230 None:intergenic
GGATGATAATGCTTATGTCA+AGG 0.611226 4_4:-10212442 Msa0668900:intron
TTTCATCAACGAGATCCCCA+TGG 0.611934 4_4:+10211629 None:intergenic
AATTCGCTGGTGGGTATCTG+GGG 0.614167 4_4:-10209677 Msa0668900:CDS
AGACTACTCTCTGTATGCTA+TGG 0.616712 4_4:-10210546 Msa0668900:CDS
TTATGCTGTAGGACGTCTAG+TGG 0.616930 4_4:-10209652 Msa0668900:CDS
GGTTGACGACCACGTTTACG+CGG 0.618906 4_4:+10212876 None:intergenic
GACAACGATTCATTCTTCGT+CGG 0.619475 4_4:-10212690 Msa0668900:CDS
GGTCATCAATTGCGTCACCC+AGG 0.619951 4_4:+10209184 None:intergenic
AGAAGCTGATGATGAAGCAA+TGG 0.621454 4_4:-10210604 Msa0668900:CDS
CATCAACTACAGCTAAAGGA+CGG 0.622151 4_4:+10207140 None:intergenic
TCTTAACTAAACAATCAAGA+GGG 0.622164 4_4:+10211572 None:intergenic
TTCTGGCCGGGTCACAACTG+TGG 0.623602 4_4:+10208088 None:intergenic
TCGATGAAGCCAAAACTCGT+TGG 0.624078 4_4:-10212653 Msa0668900:CDS
TCAACCTCATGAGTTGGTAG+CGG 0.625031 4_4:+10209398 None:intergenic
GTGCAGGTTATCAAGAACCA+TGG 0.628529 4_4:-10211646 Msa0668900:intron
CAATAGAAGCTCCAAAACAA+AGG 0.629450 4_4:+10211044 None:intergenic
CAGATACACTCTTTCAACAG+AGG 0.630022 4_4:+10208381 None:intergenic
GAATGGGAATGATGGCTGCA+GGG 0.631874 4_4:-10209611 Msa0668900:CDS
TTGTTCTTGGCGTAACGATG+AGG 0.633148 4_4:+10212630 None:intergenic
CACGCATCCGAAACTGAGGA+AGG 0.633272 4_4:+10209580 None:intergenic
TGACTCCAGTTATGATACAT+GGG 0.636735 4_4:-10210195 Msa0668900:CDS
AGCTCCAAAACAAAGGCCAG+TGG 0.639370 4_4:+10211051 None:intergenic
AAACCACTAATCCCTTGACA+AGG 0.639560 4_4:+10209828 None:intergenic
GACAACTTGGATACTTAAAG+GGG 0.640325 4_4:+10207167 None:intergenic
ATCGAGATCTGTTCTTACCA+CGG 0.643104 4_4:-10209375 Msa0668900:CDS
CTGAAAATCAGTATGAGGAG+TGG 0.643468 4_4:+10209015 None:intergenic
GCAACAATGCCGCGTAAACG+TGG 0.644048 4_4:-10212885 Msa0668900:exon
GACTCTGAAAGTGCACCAAG+TGG 0.647241 4_4:-10208629 Msa0668900:CDS
ATATCATAATATAGATCACA+AGG 0.651488 4_4:+10211403 None:intergenic
TTAAAGGGGAGAGTTGTCAA+AGG 0.651603 4_4:+10207181 None:intergenic
TAAACCCAGTGTGTATCCGA+GGG 0.654894 4_4:+10207231 None:intergenic
AGCTATGGCTTTACCTGGGT+AGG 0.656939 4_4:+10209537 None:intergenic
AAAACACGCATCCGAAACTG+AGG 0.657217 4_4:+10209576 None:intergenic
AGCTGCGCAACGATCTTCGG+TGG 0.659584 4_4:-10212718 Msa0668900:CDS
GGATAGTTCATCTGACTCTG+AGG 0.663849 4_4:-10210583 Msa0668900:CDS
AGTTCTTACTTCAAACTCCG+TGG 0.666173 4_4:+10209358 None:intergenic
AACCACTAATCCCTTGACAA+GGG 0.672154 4_4:+10209829 None:intergenic
TTGAGTAGAACGTTTAACGA+CGG 0.672653 4_4:+10212833 None:intergenic
AAAATTAACATACTGGAGGG+AGG 0.675330 4_4:+10209163 None:intergenic
GTCACCCAGGTACAACGCTG+GGG 0.678324 4_4:+10209197 None:intergenic
TGGTGATGATGATAAAGTGA+AGG 0.681304 4_4:-10212514 Msa0668900:CDS
CTGTGCAAGTGATAATAATG+TGG 0.685951 4_4:-10211155 Msa0668900:CDS
TATGCGATGAAATTTGTCCG+TGG 0.691048 4_4:-10208249 Msa0668900:CDS
GTACATACAAGTTGGAAATG+CGG 0.691245 4_4:-10207275 Msa0668900:CDS
ATATCCGCTACCAACTCATG+AGG 0.696017 4_4:-10209402 Msa0668900:CDS
CCGTGAAGTGAATGTTGATG+GGG 0.702226 4_4:-10212478 Msa0668900:CDS
GATACACTCTTTCAACAGAG+GGG 0.708698 4_4:+10208383 None:intergenic
CCACTAATCCCTTGACAAGG+GGG 0.708968 4_4:+10209831 None:intergenic
CATACTTAGAGGAAGTACCA+CGG 0.770558 4_4:+10208232 None:intergenic
TCATAATATAGATCACAAGG+AGG 0.772551 4_4:+10211406 None:intergenic
GCAGGTTATCAAGAACCATG+GGG 0.776501 4_4:-10211644 Msa0668900:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATTTGATTTTTATGT+AGG - chr4_4:10207780-10207799 Msa0668900:intron 10.0%
!!! ATTTTGTTATAAATATAGAA+GGG + chr4_4:10212633-10212652 None:intergenic 10.0%
!!! AATTTTGTTATAAATATAGA+AGG + chr4_4:10212634-10212653 None:intergenic 10.0%
!!! AATAATTTCCTTTTACATTT+TGG - chr4_4:10207033-10207052 Msa0668900:three_prime_UTR 15.0%
!!! TTTTAAGGTTTATTTTTGTT+GGG - chr4_4:10207886-10207905 Msa0668900:intron 15.0%
!!! CAATAAAATATTTCTATCTT+TGG + chr4_4:10207950-10207969 None:intergenic 15.0%
!!! CAAAGATAGAAATATTTTAT+TGG - chr4_4:10207948-10207967 Msa0668900:intron 15.0%
!! ATGAAATCAAATAAATGAAT+TGG + chr4_4:10208063-10208082 None:intergenic 15.0%
!!! ATTTATCTGATTTGAAAATA+TGG - chr4_4:10208142-10208161 Msa0668900:intron 15.0%
!! AAAAAATCAGTAAATTTACA+TGG + chr4_4:10208870-10208889 None:intergenic 15.0%
!! TAAAATTAAAGAATCTGATA+GGG - chr4_4:10209042-10209061 Msa0668900:CDS 15.0%
!!! CTTGTAAAGATTTTTTTTTA+CGG - chr4_4:10209205-10209224 Msa0668900:CDS 15.0%
!! AGAATAATAATAATGTTAGT+AGG + chr4_4:10209393-10209412 None:intergenic 15.0%
!! TTCTAAATTTATAATCTTTC+AGG - chr4_4:10209924-10209943 Msa0668900:intron 15.0%
!! CATAAAAAATAAGCAATTAT+TGG - chr4_4:10210389-10210408 Msa0668900:intron 15.0%
!! TATAATATCAATTCAAGATA+TGG + chr4_4:10211634-10211653 None:intergenic 15.0%
!!! TTTTTTCAATTAAACTTATC+TGG - chr4_4:10212243-10212262 Msa0668900:intron 15.0%
!!! AAGTTTTTTAGTGTAATTGT+GGG + chr4_4:10207011-10207030 None:intergenic 20.0%
!!! AAAGTTTTTTAGTGTAATTG+TGG + chr4_4:10207012-10207031 None:intergenic 20.0%
!!! TATTTTGACCAAAATGTAAA+AGG + chr4_4:10207044-10207063 None:intergenic 20.0%
!!! ATGTTGAAAATTGTGTTTTA+AGG - chr4_4:10207871-10207890 Msa0668900:intron 20.0%
!!! GTTTTAAGGTTTATTTTTGT+TGG - chr4_4:10207885-10207904 Msa0668900:intron 20.0%
!!! GTAAAATAGTATTCTTTTTC+AGG + chr4_4:10208379-10208398 None:intergenic 20.0%
!!! GAATTTTATTTGTTGTGTTT+TGG - chr4_4:10208439-10208458 Msa0668900:CDS 20.0%
!!! TTGGTTTTGTTTATATGTTT+AGG - chr4_4:10208458-10208477 Msa0668900:intron 20.0%
!!! TGGTTTTGTTTATATGTTTA+GGG - chr4_4:10208459-10208478 Msa0668900:intron 20.0%
!!! TTTGTATGATTTTTAGAGTT+TGG - chr4_4:10208679-10208698 Msa0668900:intron 20.0%
!! TTTCATTTGATATATACTAC+AGG - chr4_4:10208709-10208728 Msa0668900:intron 20.0%
!! ATATCATAATATAGATCACA+AGG + chr4_4:10208758-10208777 None:intergenic 20.0%
!! ATGTTTGAAAAAGTTAGATA+TGG + chr4_4:10208794-10208813 None:intergenic 20.0%
!!! GATTTTTTTAATGTTGATTG+TGG - chr4_4:10208882-10208901 Msa0668900:intron 20.0%
!! CTAAAATTAAAGAATCTGAT+AGG - chr4_4:10209041-10209060 Msa0668900:CDS 20.0%
!! ACTTTATTAGATTTGTATTC+TGG - chr4_4:10209070-10209089 Msa0668900:intron 20.0%
!! CTTTATTAGATTTGTATTCT+GGG - chr4_4:10209071-10209090 Msa0668900:intron 20.0%
!!! TAATTTGCATAATGTTTCAT+TGG - chr4_4:10209167-10209186 Msa0668900:intron 20.0%
!! AACAATGAAAATTGTTACAA+TGG + chr4_4:10209357-10209376 None:intergenic 20.0%
!! TATTATTCTTACTATCCTTT+AGG - chr4_4:10209404-10209423 Msa0668900:CDS 20.0%
!!! TTTTATCTCTTTTAAAAGAG+TGG - chr4_4:10209451-10209470 Msa0668900:intron 20.0%
!!! CAAGTTTTTATGTAAAAACA+TGG - chr4_4:10209869-10209888 Msa0668900:intron 20.0%
!! TAAATAATGCAAGATTCTAA+CGG - chr4_4:10210079-10210098 Msa0668900:intron 20.0%
!!! TTATTTTTTATGTCATCCAT+AGG + chr4_4:10210381-10210400 None:intergenic 20.0%
!! TTCTCCATCAATATATATTT+AGG + chr4_4:10210444-10210463 None:intergenic 20.0%
!!! TATAACTAAAGTTTTGTATG+TGG - chr4_4:10211394-10211413 Msa0668900:CDS 20.0%
!! ATAATTCATGTTAATGATGA+AGG + chr4_4:10211463-10211482 None:intergenic 20.0%
!!! TCATCGTTATTTAACTTATA+TGG + chr4_4:10211574-10211593 None:intergenic 20.0%
!! ATGCACAATTAAAATTTACA+GGG + chr4_4:10211681-10211700 None:intergenic 20.0%
!! AATGCACAATTAAAATTTAC+AGG + chr4_4:10211682-10211701 None:intergenic 20.0%
!!! CATTGGTTTTACAAAATATA+AGG + chr4_4:10212130-10212149 None:intergenic 20.0%
!! CATAATAAATGTTCATTGTT+TGG - chr4_4:10212306-10212325 Msa0668900:intron 20.0%
!!! CTCTAAGTTATTTTATGTAT+AGG - chr4_4:10212395-10212414 Msa0668900:intron 20.0%
!!! ATACATACCTTTCTTTTATA+GGG + chr4_4:10212509-10212528 None:intergenic 20.0%
!!! AATACATACCTTTCTTTTAT+AGG + chr4_4:10212510-10212529 None:intergenic 20.0%
! GAAAAGTAGCAAAAATTAAG+CGG - chr4_4:10207099-10207118 Msa0668900:three_prime_UTR 25.0%
! TAAATAAACTCACTTGTTCT+TGG + chr4_4:10207544-10207563 None:intergenic 25.0%
!! TATGTAGGAAATTGTGTTTT+AGG - chr4_4:10207795-10207814 Msa0668900:intron 25.0%
!! ATGTAGGAAATTGTGTTTTA+GGG - chr4_4:10207796-10207815 Msa0668900:intron 25.0%
! TAAAAACACAATATTCAGCA+TGG + chr4_4:10208224-10208243 None:intergenic 25.0%
!! ATGCTGAATATTGTGTTTTT+AGG - chr4_4:10208223-10208242 Msa0668900:intron 25.0%
!!! TGCTGAATATTGTGTTTTTA+GGG - chr4_4:10208224-10208243 Msa0668900:intron 25.0%
! TTGATTTATGAATGTTGTTC+AGG - chr4_4:10208300-10208319 Msa0668900:intron 25.0%
! TGATTTATGAATGTTGTTCA+GGG - chr4_4:10208301-10208320 Msa0668900:intron 25.0%
!! TTTAGGGTTATTGTTGAATT+TGG - chr4_4:10208475-10208494 Msa0668900:intron 25.0%
! TCTTAACTAAACAATCAAGA+GGG + chr4_4:10208589-10208608 None:intergenic 25.0%
! TTCTTAACTAAACAATCAAG+AGG + chr4_4:10208590-10208609 None:intergenic 25.0%
!!! ACTTTTTCAAACATTGACAA+TGG - chr4_4:10208800-10208819 Msa0668900:intron 25.0%
!!! TAATGTTTTTGACTTTGAAG+AGG - chr4_4:10209234-10209253 Msa0668900:CDS 25.0%
! ACATAATTAATTATCTTGCG+AGG - chr4_4:10209722-10209741 Msa0668900:CDS 25.0%
!!! CTTTGTAGTTAGTTTTATCT+AGG - chr4_4:10209767-10209786 Msa0668900:CDS 25.0%
! AAATAACCGCTAAAGTTATA+AGG + chr4_4:10209899-10209918 None:intergenic 25.0%
! ATTTAACAGCAATTGTAAAG+AGG - chr4_4:10210108-10210127 Msa0668900:intron 25.0%
! ATGAAAGAATTTGTCACTAA+AGG - chr4_4:10210133-10210152 Msa0668900:intron 25.0%
! GAAGCCTAAATATATATTGA+TGG - chr4_4:10210437-10210456 Msa0668900:intron 25.0%
!!! AATTTTAGTACAACAAGCTA+TGG + chr4_4:10210639-10210658 None:intergenic 25.0%
!!! TTGTGACTTTTTCTTAGATA+AGG - chr4_4:10210840-10210859 Msa0668900:intron 25.0%
! TGTTTGATAAAAGAAAACCA+AGG + chr4_4:10211082-10211101 None:intergenic 25.0%
!!! TTGGTTTTCTTTTATCAAAC+AGG - chr4_4:10211081-10211100 Msa0668900:CDS 25.0%
! TATATCAGATTAAAGAGAAG+TGG - chr4_4:10211169-10211188 Msa0668900:CDS 25.0%
!!! GTTTTGAAGTATATTAGTCT+TGG - chr4_4:10211214-10211233 Msa0668900:CDS 25.0%
!! GCTTGTTAATAAGAATAAAG+TGG - chr4_4:10211745-10211764 Msa0668900:intron 25.0%
! TAATAAGAATAAAGTGGAGT+TGG - chr4_4:10211751-10211770 Msa0668900:CDS 25.0%
! ACACAAAAAAAAAAAAGGCT+TGG + chr4_4:10211878-10211897 None:intergenic 25.0%
!!! AGCCTTTTTTTTTTTTGTGT+AGG - chr4_4:10211878-10211897 Msa0668900:intron 25.0%
! GACCTACACAAAAAAAAAAA+AGG + chr4_4:10211883-10211902 None:intergenic 25.0%
! ACAACTTAGAAAAAATAACC+TGG + chr4_4:10212104-10212123 None:intergenic 25.0%
! AGAAATGTTATCATACCTTA+AGG - chr4_4:10212205-10212224 Msa0668900:intron 25.0%
! TGCTAACATTATAATCCTTA+AGG + chr4_4:10212223-10212242 None:intergenic 25.0%
! AATGTTTCAATCTTTAATGC+AGG - chr4_4:10212861-10212880 Msa0668900:CDS 25.0%
! CACATTAAATATTCACACTT+TGG - chr4_4:10213177-10213196 Msa0668900:five_prime_UTR 25.0%
AAAGAAACCTAAGAAATCTC+CGG - chr4_4:10207350-10207369 Msa0668900:intron 30.0%
AAGACAAGATATTCTCAACA+TGG + chr4_4:10208115-10208134 None:intergenic 30.0%
GTTGAGAATATCTTGTCTTA+AGG - chr4_4:10208116-10208135 Msa0668900:CDS 30.0%
! CTTGTTGAGAATGTGTTTTA+GGG - chr4_4:10208183-10208202 Msa0668900:intron 30.0%
! AATACTATTTTACTGCTCAG+TGG - chr4_4:10208386-10208405 Msa0668900:CDS 30.0%
TTCAATCTTTACCGTATCTT+CGG + chr4_4:10208422-10208441 None:intergenic 30.0%
TCATAATATAGATCACAAGG+AGG + chr4_4:10208755-10208774 None:intergenic 30.0%
! TCTACAATTTCAAGTGAATC+TGG - chr4_4:10208971-10208990 Msa0668900:intron 30.0%
! CTACAATTTCAAGTGAATCT+GGG - chr4_4:10208972-10208991 Msa0668900:intron 30.0%
ATTTGTCACTAAAGGATATG+AGG - chr4_4:10210141-10210160 Msa0668900:intron 30.0%
! GTCTGTGTTACTCATTAAAT+TGG - chr4_4:10210251-10210270 Msa0668900:intron 30.0%
ATGCATTATCAAGCTAGAAT+GGG - chr4_4:10210531-10210550 Msa0668900:CDS 30.0%
TAGATAAGGAACACTGTAAT+TGG - chr4_4:10210854-10210873 Msa0668900:intron 30.0%
! AAGTTCTAATCAATGTGATC+TGG - chr4_4:10210878-10210897 Msa0668900:CDS 30.0%
TGTCATAATGCAGGAAATTA+CGG - chr4_4:10210905-10210924 Msa0668900:CDS 30.0%
AGCAAAATTAACATACTGGA+GGG + chr4_4:10211001-10211020 None:intergenic 30.0%
TGTGAGCAAAATTAACATAC+TGG + chr4_4:10211005-10211024 None:intergenic 30.0%
TTTGATTCCATTTCTTTCCT+TGG - chr4_4:10211062-10211081 Msa0668900:CDS 30.0%
AAGAAAACCAAGGAAAGAAA+TGG + chr4_4:10211072-10211091 None:intergenic 30.0%
! AGTGATGATGAAAAGAGTTA+TGG - chr4_4:10211118-10211137 Msa0668900:CDS 30.0%
! GTGATGATGAAAAGAGTTAT+GGG - chr4_4:10211119-10211138 Msa0668900:CDS 30.0%
! TATCTCTGAAAATCAGTATG+AGG + chr4_4:10211151-10211170 None:intergenic 30.0%
!! AGTAATTTGTTGTCTTTGCA+TGG - chr4_4:10211251-10211270 Msa0668900:intron 30.0%
! ATATCCTTGCTGCTTATATA+AGG - chr4_4:10211341-10211360 Msa0668900:intron 30.0%
! AAAGAGTGTATCTGAAATCT+GGG - chr4_4:10211786-10211805 Msa0668900:CDS 30.0%
CAAAAGAAGATTAGTACCAA+AGG + chr4_4:10211815-10211834 None:intergenic 30.0%
TCAAAATAAATGCATCGCTA+AGG + chr4_4:10211838-10211857 None:intergenic 30.0%
!!! TTTTTTTTTTGTGTAGGTCC+CGG - chr4_4:10211884-10211903 Msa0668900:intron 30.0%
ACAAATTTCATCGCATAATC+CGG + chr4_4:10211906-10211925 None:intergenic 30.0%
ATGCAAATGTACATACTTAG+AGG + chr4_4:10211940-10211959 None:intergenic 30.0%
ATTTATCTGCTGAATACAAC+AGG - chr4_4:10212013-10212032 Msa0668900:intron 30.0%
! TAAAGAGGTTTTGCAATTTG+AGG + chr4_4:10212166-10212185 None:intergenic 30.0%
TATGATAACATTTCTCAAGG+GGG + chr4_4:10212200-10212219 None:intergenic 30.0%
GTATGATAACATTTCTCAAG+GGG + chr4_4:10212201-10212220 None:intergenic 30.0%
GGTATGATAACATTTCTCAA+GGG + chr4_4:10212202-10212221 None:intergenic 30.0%
AGGTATGATAACATTTCTCA+AGG + chr4_4:10212203-10212222 None:intergenic 30.0%
! ATTGTTTGGACTTGTTTAAG+TGG - chr4_4:10212320-10212339 Msa0668900:intron 30.0%
! AGAAAGGTATGTATTTGAAC+TGG - chr4_4:10212515-10212534 Msa0668900:CDS 30.0%
!! TTAGAAAACTTCTGTTTCTG+TGG - chr4_4:10212582-10212601 Msa0668900:intron 30.0%
! GTTATAGTTTGAGTTACGTT+TGG - chr4_4:10212809-10212828 Msa0668900:CDS 30.0%
AGACAACTTGGATACTTAAA+GGG + chr4_4:10212995-10213014 None:intergenic 30.0%
AAGACAACTTGGATACTTAA+AGG + chr4_4:10212996-10213015 None:intergenic 30.0%
GGAAAAGACATGAATTAATG+AGG + chr4_4:10213067-10213086 None:intergenic 30.0%
GGAAGAAATCAAGATAACAA+TGG + chr4_4:10213088-10213107 None:intergenic 30.0%
! TCTTGGCTTGAAAATGAAAA+TGG + chr4_4:10213109-10213128 None:intergenic 30.0%
!! AAACTCTGGAATTGTATGAA+TGG - chr4_4:10213135-10213154 Msa0668900:five_prime_UTR 30.0%
!! ATCATTTTTGACACGATTCG+TGG + chr4_4:10206973-10206992 None:intergenic 35.0%
TTGAGTAGAACGTTTAACGA+CGG + chr4_4:10207328-10207347 None:intergenic 35.0%
! TCTTTTACCGGAGATTTCTT+AGG + chr4_4:10207360-10207379 None:intergenic 35.0%
! TCTTCGACGATTTCTTTTAC+CGG + chr4_4:10207372-10207391 None:intergenic 35.0%
! TGGTGATGATGATAAAGTGA+AGG - chr4_4:10207644-10207663 Msa0668900:intron 35.0%
! GGATGATAATGCTTATGTCA+AGG - chr4_4:10207716-10207735 Msa0668900:CDS 35.0%
!!! GGAAATTGTGTTTTAGGGTT+TGG - chr4_4:10207801-10207820 Msa0668900:intron 35.0%
TAGGGTTTGGATCTTTGATT+TGG - chr4_4:10207814-10207833 Msa0668900:intron 35.0%
!! TTGGATCTTTGATTTGGTGT+TGG - chr4_4:10207820-10207839 Msa0668900:intron 35.0%
CCTAAAACACATTCTCAACA+AGG + chr4_4:10208185-10208204 None:intergenic 35.0%
! CCTTGTTGAGAATGTGTTTT+AGG - chr4_4:10208182-10208201 Msa0668900:intron 35.0%
AGACTATATTGCTGCAATTG+TGG - chr4_4:10208339-10208358 Msa0668900:intron 35.0%
CACATTATTATCACTTGCAC+AGG + chr4_4:10209005-10209024 None:intergenic 35.0%
CTGTGCAAGTGATAATAATG+TGG - chr4_4:10209003-10209022 Msa0668900:CDS 35.0%
GATAATAATGTGGCTGAAGA+AGG - chr4_4:10209013-10209032 Msa0668900:CDS 35.0%
TTAAAGAATCTGATAGGGAG+TGG - chr4_4:10209047-10209066 Msa0668900:CDS 35.0%
TTAGATTTGTATTCTGGGTG+TGG - chr4_4:10209076-10209095 Msa0668900:intron 35.0%
CAATAGAAGCTCCAAAACAA+AGG + chr4_4:10209117-10209136 None:intergenic 35.0%
TTAAGCTTGTCACGGTATTT+AGG - chr4_4:10209143-10209162 Msa0668900:intron 35.0%
!!! TGTTTTTGACTTTGAAGAGG+TGG - chr4_4:10209237-10209256 Msa0668900:CDS 35.0%
!!! GTTTTTGACTTTGAAGAGGT+GGG - chr4_4:10209238-10209257 Msa0668900:CDS 35.0%
CCAAAACATACATGAGTTTC+AGG + chr4_4:10209311-10209330 None:intergenic 35.0%
! CCTGAAACTCATGTATGTTT+TGG - chr4_4:10209308-10209327 Msa0668900:intron 35.0%
TTCTTACTATCCTTTAGGTG+AGG - chr4_4:10209409-10209428 Msa0668900:CDS 35.0%
! TGTGAGAAGTTTGTTCTGAA+TGG - chr4_4:10209483-10209502 Msa0668900:intron 35.0%
TGATTTGAATGCTTGTGAAG+AGG - chr4_4:10209524-10209543 Msa0668900:intron 35.0%
!! CCTAGTTTTTCATCTTCGTT+GGG + chr4_4:10209642-10209661 None:intergenic 35.0%
!! TCCTAGTTTTTCATCTTCGT+TGG + chr4_4:10209643-10209662 None:intergenic 35.0%
ATTAATTATCTTGCGAGGAC+TGG - chr4_4:10209727-10209746 Msa0668900:CDS 35.0%
! TTATAATCTTTCAGGTGCAG+TGG - chr4_4:10209932-10209951 Msa0668900:intron 35.0%
ATGACTCCAGTTATGATACA+TGG - chr4_4:10209962-10209981 Msa0668900:intron 35.0%
TGACTCCAGTTATGATACAT+GGG - chr4_4:10209963-10209982 Msa0668900:intron 35.0%
CTTAAGTGAAGCAAAGATAG+AGG + chr4_4:10210026-10210045 None:intergenic 35.0%
TAAGTCTCGCTACTCATTAT+TGG - chr4_4:10210185-10210204 Msa0668900:CDS 35.0%
AACCATTAGAGGTCAAAGAA+GGG + chr4_4:10210223-10210242 None:intergenic 35.0%
AAACCATTAGAGGTCAAAGA+AGG + chr4_4:10210224-10210243 None:intergenic 35.0%
TTAGTGGTTTCAATCGCTTT+AGG - chr4_4:10210343-10210362 Msa0668900:intron 35.0%
TAGGAACAAAAATGCTCCTA+TGG - chr4_4:10210362-10210381 Msa0668900:intron 35.0%
!!! GTTGACATTTTGAAATTCGC+TGG - chr4_4:10210468-10210487 Msa0668900:intron 35.0%
!!! ACATTTTGAAATTCGCTGGT+GGG - chr4_4:10210472-10210491 Msa0668900:intron 35.0%
!! CATTCTAGCTTGATAATGCA+TGG + chr4_4:10210532-10210551 None:intergenic 35.0%
CATGCATTATCAAGCTAGAA+TGG - chr4_4:10210530-10210549 Msa0668900:CDS 35.0%
AAAATTAACATACTGGAGGG+AGG + chr4_4:10210998-10211017 None:intergenic 35.0%
GAGCAAAATTAACATACTGG+AGG + chr4_4:10211002-10211021 None:intergenic 35.0%
AGATATGGAACCTTCTTCTT+TGG + chr4_4:10211619-10211638 None:intergenic 35.0%
!!! TGTGCATTCTTGCCTTTTTT+AGG - chr4_4:10211694-10211713 Msa0668900:intron 35.0%
!!! GTGCATTCTTGCCTTTTTTA+GGG - chr4_4:10211695-10211714 Msa0668900:intron 35.0%
!!! TGCATTCTTGCCTTTTTTAG+GGG - chr4_4:10211696-10211715 Msa0668900:intron 35.0%
TATTAACAAGCACACCCTTT+AGG + chr4_4:10211736-10211755 None:intergenic 35.0%
AGATACACTCTTTCAACAGA+GGG + chr4_4:10211779-10211798 None:intergenic 35.0%
! GAAAGAGTGTATCTGAAATC+TGG - chr4_4:10211785-10211804 Msa0668900:CDS 35.0%
CAAATTTCATCGCATAATCC+GGG + chr4_4:10211905-10211924 None:intergenic 35.0%
GAAAAAATAACCTGGTTGTG+AGG + chr4_4:10212096-10212115 None:intergenic 35.0%
TTATGAGTGAAGTTCAAGCA+AGG + chr4_4:10212291-10212310 None:intergenic 35.0%
CCACAAAGTTTATAGCAATC+TGG + chr4_4:10212486-10212505 None:intergenic 35.0%
CCAGATTGCTATAAACTTTG+TGG - chr4_4:10212483-10212502 Msa0668900:CDS 35.0%
TTTGTGGCCCTATAAAAGAA+AGG - chr4_4:10212499-10212518 Msa0668900:CDS 35.0%
AACTGCTCAATAACTCCTAA+GGG - chr4_4:10212700-10212719 Msa0668900:CDS 35.0%
! AAAGTTCTGACTAATCCCTT+AGG + chr4_4:10212718-10212737 None:intergenic 35.0%
!!! GGGATTAGTCAGAACTTTTT+AGG - chr4_4:10212720-10212739 Msa0668900:CDS 35.0%
TAATGCAGGTACATACAAGT+TGG - chr4_4:10212875-10212894 Msa0668900:CDS 35.0%
! GTACATACAAGTTGGAAATG+CGG - chr4_4:10212883-10212902 Msa0668900:exon 35.0%
GACAACTTGGATACTTAAAG+GGG + chr4_4:10212994-10213013 None:intergenic 35.0%
TCATCATCAACTACAGCTAA+AGG + chr4_4:10213025-10213044 None:intergenic 35.0%
!! TTAGCTGTAGTTGATGATGA+TGG - chr4_4:10213025-10213044 Msa0668900:five_prime_UTR 35.0%
TTCCAGAGTTTGAATACTCT+TGG + chr4_4:10213126-10213145 None:intergenic 35.0%
!! TTCGTGGAGGAATTTTGAAG+TGG + chr4_4:10206957-10206976 None:intergenic 40.0%
! ATTTTTGACACGATTCGTGG+AGG + chr4_4:10206970-10206989 None:intergenic 40.0%
! TGAAGTTTTGCAACAAGAGC+GGG + chr4_4:10207142-10207161 None:intergenic 40.0%
! CTGAAGTTTTGCAACAAGAG+CGG + chr4_4:10207143-10207162 None:intergenic 40.0%
AATCGTCGAAGAAGAAGAAC+TGG - chr4_4:10207380-10207399 Msa0668900:intron 40.0%
GACAACGATTCATTCTTCGT+CGG - chr4_4:10207468-10207487 Msa0668900:intron 40.0%
! TATATGTCTGCGTTTTGCAG+TGG - chr4_4:10207618-10207637 Msa0668900:intron 40.0%
TACCGTGAAGTGAATGTTGA+TGG - chr4_4:10207678-10207697 Msa0668900:CDS 40.0%
ACCGTGAAGTGAATGTTGAT+GGG - chr4_4:10207679-10207698 Msa0668900:CDS 40.0%
TGATGGGGTCATATATAAGC+TGG - chr4_4:10207695-10207714 Msa0668900:CDS 40.0%
AATGTTATCTTGTGCCCTCA+AGG - chr4_4:10207910-10207929 Msa0668900:intron 40.0%
!! CTTCTTAACTTGTGCCTTGA+GGG + chr4_4:10207927-10207946 None:intergenic 40.0%
AATGTTGTTCAGGGAGAAGA+GGG - chr4_4:10208310-10208329 Msa0668900:intron 40.0%
! GTTTTACAGAGCCGAAGATA+CGG - chr4_4:10208408-10208427 Msa0668900:CDS 40.0%
TGCAGGTTATCAAGAACCAT+GGG - chr4_4:10208513-10208532 Msa0668900:intron 40.0%
! CAACACAAAGCACTTACATC+AGG + chr4_4:10208635-10208654 None:intergenic 40.0%
GGAAGGTTCTGTATCAATCA+GGG + chr4_4:10208912-10208931 None:intergenic 40.0%
TGGAAGGTTCTGTATCAATC+AGG + chr4_4:10208913-10208932 None:intergenic 40.0%
TGCTGACATTAAGCTTGTCA+CGG - chr4_4:10209135-10209154 Msa0668900:intron 40.0%
! AGAAGCTGATGATGAAGCAA+TGG - chr4_4:10209554-10209573 Msa0668900:CDS 40.0%
!! ATCTGACTCTGAGGTATTTG+AGG - chr4_4:10209584-10209603 Msa0668900:CDS 40.0%
AGACTACTCTCTGTATGCTA+TGG - chr4_4:10209612-10209631 Msa0668900:CDS 40.0%
CCCAACGAAGATGAAAAACT+AGG - chr4_4:10209639-10209658 Msa0668900:CDS 40.0%
GGCTCACCTTATAACTTTAG+CGG - chr4_4:10209890-10209909 Msa0668900:intron 40.0%
TAATGAGTAGCGAGACTTAC+AGG + chr4_4:10210184-10210203 None:intergenic 40.0%
ACCATTAGAGGTCAAAGAAG+GGG + chr4_4:10210222-10210241 None:intergenic 40.0%
GACAGTTGACAAACCATTAG+AGG + chr4_4:10210234-10210253 None:intergenic 40.0%
TACTACTTTGTGCTTGTCCA+GGG - chr4_4:10210279-10210298 Msa0668900:intron 40.0%
AAATGAAATCAGCTTGACCC+TGG + chr4_4:10210299-10210318 None:intergenic 40.0%
! GGTCAAGCTGATTTCATTTG+TGG - chr4_4:10210300-10210319 Msa0668900:intron 40.0%
! CAAGCTGATTTCATTTGTGG+TGG - chr4_4:10210303-10210322 Msa0668900:intron 40.0%
AACCACTAATCCCTTGACAA+GGG + chr4_4:10210332-10210351 None:intergenic 40.0%
AAACCACTAATCCCTTGACA+AGG + chr4_4:10210333-10210352 None:intergenic 40.0%
!!! GACATTTTGAAATTCGCTGG+TGG - chr4_4:10210471-10210490 Msa0668900:intron 40.0%
TCAAGCTAGAATGGGAATGA+TGG - chr4_4:10210539-10210558 Msa0668900:CDS 40.0%
! TTCGGATGCGTGTTTTTCTT+TGG - chr4_4:10210589-10210608 Msa0668900:CDS 40.0%
! TCGGATGCGTGTTTTTCTTT+GGG - chr4_4:10210590-10210609 Msa0668900:CDS 40.0%
! AACAAGCTATGGCTTTACCT+GGG + chr4_4:10210628-10210647 None:intergenic 40.0%
ATCGAGATCTGTTCTTACCA+CGG - chr4_4:10210783-10210802 Msa0668900:intron 40.0%
AGTTCTTACTTCAAACTCCG+TGG + chr4_4:10210803-10210822 None:intergenic 40.0%
TCTGGCTATTGTCATAATGC+AGG - chr4_4:10210896-10210915 Msa0668900:CDS 40.0%
CTGAAAATCAGTATGAGGAG+TGG + chr4_4:10211146-10211165 None:intergenic 40.0%
CAGTCCTTATATAAGCAGCA+AGG + chr4_4:10211348-10211367 None:intergenic 40.0%
!! TGTTTTCTCCTCTCTAGAGA+TGG - chr4_4:10211492-10211511 Msa0668900:intron 40.0%
! GTAATTCACCATCTCTAGAG+AGG + chr4_4:10211503-10211522 None:intergenic 40.0%
TTGCCTCATTCCAAAGAAGA+AGG - chr4_4:10211606-10211625 Msa0668900:CDS 40.0%
!! GAACCTTCTTCTTTGGAATG+AGG + chr4_4:10211612-10211631 None:intergenic 40.0%
!!! GCATTCTTGCCTTTTTTAGG+GGG - chr4_4:10211697-10211716 Msa0668900:intron 40.0%
TGAAGTTTGCCCCCTAAAAA+AGG + chr4_4:10211709-10211728 None:intergenic 40.0%
!!! TTTTTTAGGGGGCAAACTTC+AGG - chr4_4:10211708-10211727 Msa0668900:intron 40.0%
!! TTTTTAGGGGGCAAACTTCA+GGG - chr4_4:10211709-10211728 Msa0668900:intron 40.0%
GATACACTCTTTCAACAGAG+GGG + chr4_4:10211778-10211797 None:intergenic 40.0%
CAGATACACTCTTTCAACAG+AGG + chr4_4:10211780-10211799 None:intergenic 40.0%
TATGCGATGAAATTTGTCCG+TGG - chr4_4:10211909-10211928 Msa0668900:intron 40.0%
!! CATACTTAGAGGAAGTACCA+CGG + chr4_4:10211929-10211948 None:intergenic 40.0%
CAATTTGAGGATAGCATGAG+TGG + chr4_4:10212153-10212172 None:intergenic 40.0%
TGAAGTTCAAGCAAGGAACA+TGG + chr4_4:10212284-10212303 None:intergenic 40.0%
GTAAGAACTCTGTCTTGCTT+TGG + chr4_4:10212432-10212451 None:intergenic 40.0%
TTACCATTCGAGAGAATGCA+AGG - chr4_4:10212448-10212467 Msa0668900:CDS 40.0%
CAACTGCTCAATAACTCCTA+AGG - chr4_4:10212699-10212718 Msa0668900:CDS 40.0%
ACACTGGGTTTAGCAATTCA+AGG - chr4_4:10212938-10212957 Msa0668900:five_prime_UTR 40.0%
TTAAAGGGGAGAGTTGTCAA+AGG + chr4_4:10212980-10212999 None:intergenic 40.0%
ATCAACTACAGCTAAAGGAC+GGG + chr4_4:10213020-10213039 None:intergenic 40.0%
CATCAACTACAGCTAAAGGA+CGG + chr4_4:10213021-10213040 None:intergenic 40.0%
!! AGCCAAGAGTATTCAAACTC+TGG - chr4_4:10213121-10213140 Msa0668900:five_prime_UTR 40.0%
TTTCCAGTTACACTGTGAGC+TGG - chr4_4:10207067-10207086 Msa0668900:three_prime_UTR 45.0%
AGTTACACTGTGAGCTGGTT+GGG - chr4_4:10207072-10207091 Msa0668900:three_prime_UTR 45.0%
!!! ACGGCGTCATTTTGCTGTTT+CGG + chr4_4:10207309-10207328 None:intergenic 45.0%
TTCTGTCGAGAAGGAAGTGA+CGG + chr4_4:10207417-10207436 None:intergenic 45.0%
TCGATGAAGCCAAAACTCGT+TGG - chr4_4:10207505-10207524 Msa0668900:intron 45.0%
TTGTTCTTGGCGTAACGATG+AGG + chr4_4:10207531-10207550 None:intergenic 45.0%
CCCCATCAACATTCACTTCA+CGG + chr4_4:10207683-10207702 None:intergenic 45.0%
CCGTGAAGTGAATGTTGATG+GGG - chr4_4:10207680-10207699 Msa0668900:CDS 45.0%
!! GCTTCTTAACTTGTGCCTTG+AGG + chr4_4:10207928-10207947 None:intergenic 45.0%
GAATGTTGTTCAGGGAGAAG+AGG - chr4_4:10208309-10208328 Msa0668900:intron 45.0%
GGTGATTTGAATGTGTGTGC+AGG - chr4_4:10208496-10208515 Msa0668900:intron 45.0%
GTGCAGGTTATCAAGAACCA+TGG - chr4_4:10208512-10208531 Msa0668900:intron 45.0%
GCAGGTTATCAAGAACCATG+GGG - chr4_4:10208514-10208533 Msa0668900:intron 45.0%
TTTCATCAACGAGATCCCCA+TGG + chr4_4:10208532-10208551 None:intergenic 45.0%
! GGGATCTCGTTGATGAAAAG+AGG - chr4_4:10208534-10208553 Msa0668900:intron 45.0%
GTCTCGCTTTCTATTCTGGA+AGG + chr4_4:10208929-10208948 None:intergenic 45.0%
AGCAGTCTCGCTTTCTATTC+TGG + chr4_4:10208933-10208952 None:intergenic 45.0%
ATTATCACTTGCACAGGCGT+TGG + chr4_4:10208999-10209018 None:intergenic 45.0%
!!! ATGTCCACTGGCCTTTGTTT+TGG - chr4_4:10209103-10209122 Msa0668900:intron 45.0%
CAATGGCAAGCATCAACTAC+AGG + chr4_4:10209340-10209359 None:intergenic 45.0%
CTGTCTCATTCCTCACCTAA+AGG + chr4_4:10209422-10209441 None:intergenic 45.0%
TTGAATGCTTGTGAAGAGGC+TGG - chr4_4:10209528-10209547 Msa0668900:intron 45.0%
GGATAGTTCATCTGACTCTG+AGG - chr4_4:10209575-10209594 Msa0668900:CDS 45.0%
! AATCTTTCAGGTGCAGTGGA+AGG - chr4_4:10209936-10209955 Msa0668900:intron 45.0%
! ATCTTTCAGGTGCAGTGGAA+GGG - chr4_4:10209937-10209956 Msa0668900:intron 45.0%
TGGCTCCCATGTATCATAAC+TGG + chr4_4:10209971-10209990 None:intergenic 45.0%
TGATACATGGGAGCCAATTG+AGG - chr4_4:10209975-10209994 Msa0668900:intron 45.0%
GATACATGGGAGCCAATTGA+GGG - chr4_4:10209976-10209995 Msa0668900:intron 45.0%
GTATACCTCAAGCCCTCAAT+TGG + chr4_4:10209991-10210010 None:intergenic 45.0%
ACCCCTTCTTTGACCTCTAA+TGG - chr4_4:10210218-10210237 Msa0668900:intron 45.0%
GTACTACTTTGTGCTTGTCC+AGG - chr4_4:10210278-10210297 Msa0668900:intron 45.0%
ACCACTAATCCCTTGACAAG+GGG + chr4_4:10210331-10210350 None:intergenic 45.0%
! AAATTCGCTGGTGGGTATCT+GGG - chr4_4:10210480-10210499 Msa0668900:intron 45.0%
TTATGCTGTAGGACGTCTAG+TGG - chr4_4:10210506-10210525 Msa0668900:CDS 45.0%
AAAACACGCATCCGAAACTG+AGG + chr4_4:10210585-10210604 None:intergenic 45.0%
! CGGATGCGTGTTTTTCTTTG+GGG - chr4_4:10210591-10210610 Msa0668900:CDS 45.0%
! CAACAAGCTATGGCTTTACC+TGG + chr4_4:10210629-10210648 None:intergenic 45.0%
!! TGAGTTGGTAGCGGATATGA+AGG + chr4_4:10210754-10210773 None:intergenic 45.0%
ATATCCGCTACCAACTCATG+AGG - chr4_4:10210756-10210775 Msa0668900:intron 45.0%
!! TCAACCTCATGAGTTGGTAG+CGG + chr4_4:10210763-10210782 None:intergenic 45.0%
CTCGATTCAACCTCATGAGT+TGG + chr4_4:10210769-10210788 None:intergenic 45.0%
TGATCATACAGCAGACCACT+TGG + chr4_4:10211547-10211566 None:intergenic 45.0%
GCAAACTTCAGGGACCTAAA+GGG - chr4_4:10211719-10211738 Msa0668900:intron 45.0%
! TCTGAAATCTGGGAAGCCTT+TGG - chr4_4:10211796-10211815 Msa0668900:CDS 45.0%
GCTGAATACAACAGGCCATT+TGG - chr4_4:10212021-10212040 Msa0668900:intron 45.0%
ATAACCTGGTTGTGAGGTTC+TGG + chr4_4:10212090-10212109 None:intergenic 45.0%
!! GGGGCAACATTGCTTTAAAG+AGG + chr4_4:10212181-10212200 None:intergenic 45.0%
TTATCTGGCCATGTTCCTTC+TGG - chr4_4:10212258-10212277 Msa0668900:intron 45.0%
! GAACTCTGTCTTGCTTTGGA+TGG + chr4_4:10212428-10212447 None:intergenic 45.0%
! TAGCCTTGCATTCTCTCGAA+TGG + chr4_4:10212454-10212473 None:intergenic 45.0%
TAAACCCAGTGTGTATCCGA+GGG + chr4_4:10212930-10212949 None:intergenic 45.0%
TTAGCAATTCAAGGACGCTC+TGG - chr4_4:10212947-10212966 Msa0668900:five_prime_UTR 45.0%
!!! TTTTTTTTTTTTTTTGTTTA+GGG + chr4_4:10207231-10207250 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTGTTT+AGG + chr4_4:10207232-10207251 None:intergenic 5.0%
CAACCAGCTCACAGTGTAAC+TGG + chr4_4:10207073-10207092 None:intergenic 50.0%
CAGTTACACTGTGAGCTGGT+TGG - chr4_4:10207071-10207090 Msa0668900:three_prime_UTR 50.0%
!!! GCGTCATTTTGCTGTTTCGG+TGG + chr4_4:10207306-10207325 None:intergenic 50.0%
GCAGCTTTCTTCTGTCGAGA+AGG + chr4_4:10207426-10207445 None:intergenic 50.0%
GAAAGCTGCGCAACGATCTT+CGG - chr4_4:10207437-10207456 Msa0668900:intron 50.0%
! CTTCGTCGGTGATCCTTTTC+CGG - chr4_4:10207482-10207501 Msa0668900:intron 50.0%
TTGGCTTCATCGACCGGAAA+AGG + chr4_4:10207498-10207517 None:intergenic 50.0%
!!! CGAGTTTTGGCTTCATCGAC+CGG + chr4_4:10207504-10207523 None:intergenic 50.0%
! ACGATGAGGCCAACGAGTTT+TGG + chr4_4:10207517-10207536 None:intergenic 50.0%
! TCTGCGTTTTGCAGTGGTTC+TGG - chr4_4:10207624-10207643 Msa0668900:intron 50.0%
AGCTCCAAAACAAAGGCCAG+TGG + chr4_4:10209110-10209129 None:intergenic 50.0%
GTAGCGAGACTTACAGGAAG+AGG + chr4_4:10210178-10210197 None:intergenic 50.0%
TCAAAGAAGGGGTTGAGTGC+AGG + chr4_4:10210211-10210230 None:intergenic 50.0%
CCACTAATCCCTTGACAAGG+GGG + chr4_4:10210330-10210349 None:intergenic 50.0%
! GAAATTCGCTGGTGGGTATC+TGG - chr4_4:10210479-10210498 Msa0668900:intron 50.0%
! AATTCGCTGGTGGGTATCTG+GGG - chr4_4:10210481-10210500 Msa0668900:intron 50.0%
! TATCTGGGGCGTTATGCTGT+AGG - chr4_4:10210495-10210514 Msa0668900:intron 50.0%
AGAATGGGAATGATGGCTGC+AGG - chr4_4:10210546-10210565 Msa0668900:CDS 50.0%
GAATGGGAATGATGGCTGCA+GGG - chr4_4:10210547-10210566 Msa0668900:CDS 50.0%
! AGCTATGGCTTTACCTGGGT+AGG + chr4_4:10210624-10210643 None:intergenic 50.0%
! GACTCTGAAAGTGCACCAAG+TGG - chr4_4:10211529-10211548 Msa0668900:intron 50.0%
GTGGTCTGCTGTATGATCAC+AGG - chr4_4:10211548-10211567 Msa0668900:CDS 50.0%
GGCAAACTTCAGGGACCTAA+AGG - chr4_4:10211718-10211737 Msa0668900:intron 50.0%
! ACAGGCCATTTGGTCGACTT+TGG - chr4_4:10212031-10212050 Msa0668900:intron 50.0%
! GCCATTTGGTCGACTTTGGT+GGG - chr4_4:10212035-10212054 Msa0668900:intron 50.0%
TCCCACCAAAGTCGACCAAA+TGG + chr4_4:10212039-10212058 None:intergenic 50.0%
TTGTGTCCACAGTTGTGACC+CGG - chr4_4:10212064-10212083 Msa0668900:intron 50.0%
GAGGATAGCATGAGTGGCAT+TGG + chr4_4:10212147-10212166 None:intergenic 50.0%
GAACATGGCCAGAAGGAACA+TGG + chr4_4:10212269-10212288 None:intergenic 50.0%
AAGCAAGGAACATGGCCAGA+AGG + chr4_4:10212276-10212295 None:intergenic 50.0%
TCGAGAGAATGCAAGGCTAC+AGG - chr4_4:10212455-10212474 Msa0668900:CDS 50.0%
CGAGAGAATGCAAGGCTACA+GGG - chr4_4:10212456-10212475 Msa0668900:CDS 50.0%
! AAATGCGGTTGCTGTTCCTG+TGG - chr4_4:10212898-10212917 Msa0668900:exon 50.0%
! AATGCGGTTGCTGTTCCTGT+GGG - chr4_4:10212899-10212918 Msa0668900:exon 50.0%
CTAAACCCAGTGTGTATCCG+AGG + chr4_4:10212931-10212950 None:intergenic 50.0%
AAAGGACGGGCAAGACAACT+TGG + chr4_4:10213007-10213026 None:intergenic 50.0%
GCAACAATGCCGCGTAAACG+TGG - chr4_4:10207273-10207292 Msa0668900:CDS 55.0%
GGTTGACGACCACGTTTACG+CGG + chr4_4:10207285-10207304 None:intergenic 55.0%
!! GACTTTGAAGAGGTGGGCTG+TGG - chr4_4:10209244-10209263 Msa0668900:intron 55.0%
!! TGCGAGGACTGGCTTCAATC+TGG - chr4_4:10209738-10209757 Msa0668900:CDS 55.0%
!! GCGAGGACTGGCTTCAATCT+GGG - chr4_4:10209739-10209758 Msa0668900:CDS 55.0%
CCCCCTTGTCAAGGGATTAG+TGG - chr4_4:10210327-10210346 Msa0668900:intron 55.0%
ATGATGGCTGCAGGGTCGTA+CGG - chr4_4:10210555-10210574 Msa0668900:CDS 55.0%
CGTACGGCCTTCCTCAGTTT+CGG - chr4_4:10210571-10210590 Msa0668900:CDS 55.0%
CACGCATCCGAAACTGAGGA+AGG + chr4_4:10210581-10210600 None:intergenic 55.0%
GGTCATCAATTGCGTCACCC+AGG + chr4_4:10210977-10210996 None:intergenic 55.0%
! GGCCATTTGGTCGACTTTGG+TGG - chr4_4:10212034-10212053 Msa0668900:intron 55.0%
CTTGCCCTCGGATACACACT+GGG - chr4_4:10212923-10212942 Msa0668900:five_prime_UTR 55.0%
AGCTGCGCAACGATCTTCGG+TGG - chr4_4:10207440-10207459 Msa0668900:intron 60.0%
GGGTGTGGAGCTATGTCCAC+TGG - chr4_4:10209091-10209110 Msa0668900:intron 60.0%
GGGAGCCAATTGAGGGCTTG+AGG - chr4_4:10209983-10210002 Msa0668900:intron 60.0%
!! TGTGGTGGACCCCCTTGTCA+AGG - chr4_4:10210318-10210337 Msa0668900:intron 60.0%
!! GTGGTGGACCCCCTTGTCAA+GGG - chr4_4:10210319-10210338 Msa0668900:intron 60.0%
TTGGGGAGCTCTTCCTACCC+AGG - chr4_4:10210608-10210627 Msa0668900:CDS 60.0%
CTTGCCCCAGCGTTGTACCT+GGG - chr4_4:10210957-10210976 Msa0668900:intron 60.0%
GTCACCCAGGTACAACGCTG+GGG + chr4_4:10210964-10210983 None:intergenic 60.0%
CGTCACCCAGGTACAACGCT+GGG + chr4_4:10210965-10210984 None:intergenic 60.0%
TTCTGGCCGGGTCACAACTG+TGG + chr4_4:10212073-10212092 None:intergenic 60.0%
! CTGGTTGTGAGGTTCTGGCC+GGG + chr4_4:10212085-10212104 None:intergenic 60.0%
! CCTGGTTGTGAGGTTCTGGC+CGG + chr4_4:10212086-10212105 None:intergenic 60.0%
CCAGTGTGTATCCGAGGGCA+AGG + chr4_4:10212925-10212944 None:intergenic 60.0%
CCTTGCCCTCGGATACACAC+TGG - chr4_4:10212922-10212941 Msa0668900:five_prime_UTR 60.0%
GCTTGCCCCAGCGTTGTACC+TGG - chr4_4:10210956-10210975 Msa0668900:intron 65.0%
GCGTCACCCAGGTACAACGC+TGG + chr4_4:10210966-10210985 None:intergenic 65.0%
CCGGCCAGAACCTCACAACC+AGG - chr4_4:10212083-10212102 Msa0668900:intron 65.0%
GTTCCTGTGGGCCTTGCCCT+CGG - chr4_4:10212911-10212930 Msa0668900:five_prime_UTR 65.0%
TATCCGAGGGCAAGGCCCAC+AGG + chr4_4:10212917-10212936 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 10206937 10213243 10206937 ID=Msa0668900;Name=Msa0668900
chr4_4 mRNA 10206937 10213243 10206937 ID=Msa0668900-mRNA-1;Parent=Msa0668900;Name=Msa0668900-mRNA-1;_AED=0.10;_eAED=0.10;_QI=342|1|1|1|1|1|20|186|850
chr4_4 exon 10206937 10207297 10206937 ID=Msa0668900-mRNA-1:exon:3129;Parent=Msa0668900-mRNA-1
chr4_4 exon 10207660 10207763 10207660 ID=Msa0668900-mRNA-1:exon:3128;Parent=Msa0668900-mRNA-1
chr4_4 exon 10208076 10208145 10208076 ID=Msa0668900-mRNA-1:exon:3127;Parent=Msa0668900-mRNA-1
chr4_4 exon 10208237 10208280 10208237 ID=Msa0668900-mRNA-1:exon:3126;Parent=Msa0668900-mRNA-1
chr4_4 exon 10208363 10208464 10208363 ID=Msa0668900-mRNA-1:exon:3125;Parent=Msa0668900-mRNA-1
chr4_4 exon 10208553 10208671 10208553 ID=Msa0668900-mRNA-1:exon:3124;Parent=Msa0668900-mRNA-1
chr4_4 exon 10208990 10209077 10208990 ID=Msa0668900-mRNA-1:exon:3123;Parent=Msa0668900-mRNA-1
chr4_4 exon 10209176 10209262 10209176 ID=Msa0668900-mRNA-1:exon:3122;Parent=Msa0668900-mRNA-1
chr4_4 exon 10209367 10209435 10209367 ID=Msa0668900-mRNA-1:exon:3121;Parent=Msa0668900-mRNA-1
chr4_4 exon 10209551 10209880 10209551 ID=Msa0668900-mRNA-1:exon:3120;Parent=Msa0668900-mRNA-1
chr4_4 exon 10209997 10210063 10209997 ID=Msa0668900-mRNA-1:exon:3119;Parent=Msa0668900-mRNA-1
chr4_4 exon 10210176 10210234 10210176 ID=Msa0668900-mRNA-1:exon:3118;Parent=Msa0668900-mRNA-1
chr4_4 exon 10210506 10210754 10210506 ID=Msa0668900-mRNA-1:exon:3117;Parent=Msa0668900-mRNA-1
chr4_4 exon 10210861 10210926 10210861 ID=Msa0668900-mRNA-1:exon:3116;Parent=Msa0668900-mRNA-1
chr4_4 exon 10211024 10211256 10211024 ID=Msa0668900-mRNA-1:exon:3115;Parent=Msa0668900-mRNA-1
chr4_4 exon 10211359 10211449 10211359 ID=Msa0668900-mRNA-1:exon:3114;Parent=Msa0668900-mRNA-1
chr4_4 exon 10211543 10211662 10211543 ID=Msa0668900-mRNA-1:exon:3113;Parent=Msa0668900-mRNA-1
chr4_4 exon 10211751 10211858 10211751 ID=Msa0668900-mRNA-1:exon:3112;Parent=Msa0668900-mRNA-1
chr4_4 exon 10212443 10212542 10212443 ID=Msa0668900-mRNA-1:exon:3111;Parent=Msa0668900-mRNA-1
chr4_4 exon 10212630 10213243 10212630 ID=Msa0668900-mRNA-1:exon:3110;Parent=Msa0668900-mRNA-1
chr4_4 five_prime_UTR 10212902 10213243 10212902 ID=Msa0668900-mRNA-1:five_prime_utr;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10212630 10212901 10212630 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10212443 10212542 10212443 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10211751 10211858 10211751 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10211543 10211662 10211543 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10211359 10211449 10211359 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10211024 10211256 10211024 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10210861 10210926 10210861 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10210506 10210754 10210506 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10210176 10210234 10210176 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10209997 10210063 10209997 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10209551 10209880 10209551 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10209367 10209435 10209367 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10209176 10209262 10209176 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10208990 10209077 10208990 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10208553 10208671 10208553 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10208363 10208464 10208363 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10208237 10208280 10208237 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10208076 10208145 10208076 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10207660 10207763 10207660 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 CDS 10207123 10207297 10207123 ID=Msa0668900-mRNA-1:cds;Parent=Msa0668900-mRNA-1
chr4_4 three_prime_UTR 10206937 10207122 10206937 ID=Msa0668900-mRNA-1:three_prime_utr;Parent=Msa0668900-mRNA-1
Gene Sequence

>Msa0668900

ATGCCGCGTAAACGTGGTCGTCAACCACCGAAACAGCAAAATGACGCCGTCGTTAAACGTTCTACTCAACGAAAGAAACCTAAGAAATCTCCGGTAAAAGAAATCGTCGAAGAAGAAGAACTGGTTTCACTTCTTCCGTCACTTCCTTCTCGACAGAAGAAAGCTGCGCAACGATCTTCGGTGGTTAACGACAACGATTCATTCTTCGTCGGTGATCCTTTTCCGGTCGATGAAGCCAAAACTCGTTGGCCTCATCGTTACGCCAAGAACAATGGTTCTGGTGATGATGATAAAGTGAAGGCGAAGTTTCATTACCGTGAAGTGAATGTTGATGGGGTCATATATAAGCTGGATGATAATGCTTATGTCAAGGGAGAAGAGGGTCAAAAAGACTATATTGCTGCAATTGTGGAATTGTTTGAAACACCTGAAAAAGAATACTATTTTACTGCTCAGTGGTTTTACAGAGCCGAAGATACGGTTATCAAGAACCATGGGGATCTCGTTGATGAAAAGAGGATTTTTAAATCTGATGTGAAAGATGAAAACCCTCTTGATTGTTTAGTTAAGAAAGTAAACATTGTACAAATTTCTCCTGATGATGCTAAAAAGAAGAATGTTCCTCCTTGTGATCTATATTATGATATGAAGTACACTTTGCCATATCTAACTTTTTCAAACATTGACAATGAACCTTCCAGAATAGAAAGCGAGACTGCTAGAATAGAAAGCGAGACTTCTACAATTTCAAGTGAATCTGGGTCCAACGCCTGTGCAAGTGATAATAATGTGGCTGAAGAAGGATTGTCTAAAATTAAAGAATCTGATAGGGAGTGGACTTTATTAGATTTGTATTCTGGGTGTGGAGCTATGTCCACTGGCCTTTGTTTTGGAGCTTCTATTGCTGACATTAAGCTTGTCACGAGGTGGGCTGTGGATACAAATGAATATGCATGTCAGAGTCTAAAGCTGAATCATCCTGAAACTCATGTGAGGAATGAGACAGCTGAAGACTTTTTATCTCTTTTAAAAGAGTGGTTTAAATTGTGTGAGAAGTTTGTTCTGAATGGAACAGAAAATATAGATTATGATTTGAATGCTTGTGAAGAGGCTGGTGAAGAAGCTGATGATGAAGCAATGGATAGTTCATCTGACTCTGAGGTATTTGAGGTTGAAAGACTACTCTCTGTATGCTATGGTGATCCCAACGAAGATGAAAAACTAGGACTGTATTTCAAAGTGCAGTGGAAGGGTTATGACTCCAGTTATGATACATGGGAGCCAATTGAGGGCTTGAGCAATTGTAAAGAGGCTATGAAAGAATTTGTCACTAAAGGATATGAGGATAAGATATTGCCTCTTCCTGGTCAAGCTGATTTCATTTGTGGTGGACCCCCTTGTCAAGGGATTAGTGGTTTCAATCGCTTTAGGAACAAAAATGCTCCTATGGATGACATAAAAAATAAGCAATTATTGGTCTACATGAATATTATTGAATTTTTGAAGCCTAAATATATATTGATGGAGAATGTTGTTGACATTTTGAAATTCGCTGGTGGGTATCTGGGGCGTTATGCTGTAGGACGTCTAGTGGCCATGCATTATCAAGCTAGAATGGGAATGATGGCTGCAGGGTCGTACGGCCTTCCTCAGTTTCGGATGCGTGTTTTTCTTTGGGGAGCTCTTCCTACCCAGAATTTACCTTCATATCCGCTACCAACTCATGAGGTTGAATCGAGATCTGTTCTTACCACGGAGTTTGAAGAAATTACGGTAGCATATACTACTAATGAAAAGTGTCAGCTTGCCCCAGCGTTGTACCTGGGTGACGCAATTGATGACCTCCCTCCAGTTGAAAATGATGACAGTGATGATGAAAAGAGTTATGGGACCACTCCTCATACTGATTTTCAGAGATATATCAGATTAAAGAGAAGTGAGATGGTGAATTACACAGCTGACTCTGAAAGTGCACCAAGTGGTCTGCTGTATGATCACAGGCCATATAAGTTAAATAACGATGACTATGAGAGAGTTTGCCTCATTCCAAAGAAGAAGGGGGCAAACTTCAGGGACCTAAAGGGTGTGCTTGTTAATAAGAATAAAGTGGAGTTGGACCCCTCTGTTGAAAGAGTGTATCTGAAATCTGGGAAGCCTTTGGTCCCGGATTATGCGATGAAATTTGTCCGTGGTACTTCCTCTAAGCCATTTGGTCGACTTTGGTGGGACGAAATTGTGTCCACAGTTGTGACCCGGCCAGAACCTCACAACCAGGTTCTTATCCATCCAAAGCAAGACAGAGTTCTTACCATTCGAGAGAATGCAAGGCTACAGGGATTTCCAGATTGCTATAAACTTTGTGGCCCTATAAAAGAAAGGTACATACAAGTTGGAAATGCGGTTGCTGTTCCTGTGGGCCTTGCCCTCGGATACACACTGGGTTTAGCAATTCAAGGACGCTCTGGTGATAATCCTTTGACAACTCTCCCCTTTAAGTATCCAAGTTGTCTTGCCCGTCCTTTAGCTGTAGTTGATGATGATGGTTCAAGTTGA
Protein sequence

>Msa0668900

MPRKRGRQPPKQQNDAVVKRSTQRKKPKKSPVKEIVEEEELVSLLPSLPSRQKKAAQRSSVVNDNDSFFVGDPFPVDEAKTRWPHRYAKNNGSGDDDKVKAKFHYREVNVDGVIYKLDDNAYVKGEEGQKDYIAAIVELFETPEKEYYFTAQWFYRAEDTVIKNHGDLVDEKRIFKSDVKDENPLDCLVKKVNIVQISPDDAKKKNVPPCDLYYDMKYTLPYLTFSNIDNEPSRIESETARIESETSTISSESGSNACASDNNVAEEGLSKIKESDREWTLLDLYSGCGAMSTGLCFGASIADIKLVTRWAVDTNEYACQSLKLNHPETHVRNETAEDFLSLLKEWFKLCEKFVLNGTENIDYDLNACEEAGEEADDEAMDSSSDSEVFEVERLLSVCYGDPNEDEKLGLYFKVQWKGYDSSYDTWEPIEGLSNCKEAMKEFVTKGYEDKILPLPGQADFICGGPPCQGISGFNRFRNKNAPMDDIKNKQLLVYMNIIEFLKPKYILMENVVDILKFAGGYLGRYAVGRLVAMHYQARMGMMAAGSYGLPQFRMRVFLWGALPTQNLPSYPLPTHEVESRSVLTTEFEEITVAYTTNEKCQLAPALYLGDAIDDLPPVENDDSDDEKSYGTTPHTDFQRYIRLKRSEMVNYTADSESAPSGLLYDHRPYKLNNDDYERVCLIPKKKGANFRDLKGVLVNKNKVELDPSVERVYLKSGKPLVPDYAMKFVRGTSSKPFGRLWWDEIVSTVVTRPEPHNQVLIHPKQDRVLTIRENARLQGFPDCYKLCGPIKERYIQVGNAVAVPVGLALGYTLGLAIQGRSGDNPLTTLPFKYPSCLARPLAVVDDDGSS*