Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0548000 | QCE09247.1 | 73.913 | 276 | 38 | 2 | 25 | 266 | 24 | 299 | 2.74e-127 | 373 |
| Msa0548000 | QCE09247.1 | 90.840 | 131 | 12 | 0 | 132 | 262 | 15 | 145 | 2.98e-66 | 218 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0548000 | sp|Q2HU68|H2A1_MEDTR | 88.667 | 150 | 15 | 1 | 117 | 266 | 1 | 148 | 5.10e-81 | 243 |
| Msa0548000 | sp|Q2HU68|H2A1_MEDTR | 87.826 | 115 | 8 | 2 | 1 | 111 | 1 | 113 | 1.77e-55 | 178 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0548000 | A0A3Q7J176 | 79.377 | 257 | 40 | 4 | 20 | 266 | 19 | 272 | 2.07e-128 | 374 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005020 | Msa0548000 | 0.807558 | 4.766501e-50 | -8.615850e-47 |
| Msa0015570 | Msa0548000 | 0.828005 | 1.143169e-54 | -8.615850e-47 |
| Msa0016040 | Msa0548000 | 0.811468 | 6.897566e-51 | -8.615850e-47 |
| Msa0016530 | Msa0548000 | 0.802252 | 6.126795e-49 | -8.615850e-47 |
| Msa0018920 | Msa0548000 | 0.820602 | 6.289066e-53 | -8.615850e-47 |
| Msa0019930 | Msa0548000 | 0.815982 | 6.994050e-52 | -8.615850e-47 |
| Msa0020540 | Msa0548000 | 0.849440 | 3.228827e-60 | -8.615850e-47 |
| Msa0030070 | Msa0548000 | 0.838153 | 3.405327e-57 | -8.615850e-47 |
| Msa0030690 | Msa0548000 | 0.814665 | 1.372606e-51 | -8.615850e-47 |
| Msa0032980 | Msa0548000 | 0.837007 | 6.699396e-57 | -8.615850e-47 |
| Msa0033780 | Msa0548000 | 0.807366 | 5.235122e-50 | -8.615850e-47 |
| Msa0035140 | Msa0548000 | 0.839634 | 1.408921e-57 | -8.615850e-47 |
| Msa0053070 | Msa0548000 | 0.808358 | 3.221772e-50 | -8.615850e-47 |
| Msa0056180 | Msa0548000 | 0.816157 | 6.391960e-52 | -8.615850e-47 |
| Msa0067060 | Msa0548000 | 0.820040 | 8.460066e-53 | -8.615850e-47 |
| Msa0067380 | Msa0548000 | 0.847474 | 1.130642e-59 | -8.615850e-47 |
| Msa0068150 | Msa0548000 | 0.822939 | 1.810820e-53 | -8.615850e-47 |
| Msa0075530 | Msa0548000 | 0.814375 | 1.590948e-51 | -8.615850e-47 |
| Msa0078130 | Msa0548000 | 0.806692 | 7.271804e-50 | -8.615850e-47 |
| Msa0090440 | Msa0548000 | 0.803879 | 2.823884e-49 | -8.615850e-47 |
| Msa0091350 | Msa0548000 | 0.849077 | 4.075952e-60 | -8.615850e-47 |
| Msa0098410 | Msa0548000 | 0.826652 | 2.412532e-54 | -8.615850e-47 |
| Msa0106630 | Msa0548000 | 0.808612 | 2.843673e-50 | -8.615850e-47 |
| Msa0112670 | Msa0548000 | 0.817195 | 3.739289e-52 | -8.615850e-47 |
| Msa0113410 | Msa0548000 | 0.840000 | 1.131804e-57 | -8.615850e-47 |
| Msa0115550 | Msa0548000 | 0.826239 | 3.025581e-54 | -8.615850e-47 |
| Msa0123320 | Msa0548000 | 0.810565 | 1.082137e-50 | -8.615850e-47 |
| Msa0125590 | Msa0548000 | 0.848657 | 5.329071e-60 | -8.615850e-47 |
| Msa0127340 | Msa0548000 | 0.836235 | 1.054163e-56 | -8.615850e-47 |
| Msa0127680 | Msa0548000 | 0.867278 | 1.539917e-65 | -8.615850e-47 |
| Msa0140380 | Msa0548000 | 0.824295 | 8.720191e-54 | -8.615850e-47 |
| Msa0141640 | Msa0548000 | 0.833258 | 5.914933e-56 | -8.615850e-47 |
| Msa0153210 | Msa0548000 | 0.812835 | 3.470984e-51 | -8.615850e-47 |
| Msa0156050 | Msa0548000 | 0.820255 | 7.554939e-53 | -8.615850e-47 |
| Msa0156090 | Msa0548000 | 0.812158 | 4.880449e-51 | -8.615850e-47 |
| Msa0158900 | Msa0548000 | 0.815543 | 8.761917e-52 | -8.615850e-47 |
| Msa0159590 | Msa0548000 | 0.841782 | 3.856298e-58 | -8.615850e-47 |
| Msa0159620 | Msa0548000 | 0.827157 | 1.826356e-54 | -8.615850e-47 |
| Msa0165830 | Msa0548000 | 0.850436 | 1.700096e-60 | -8.615850e-47 |
| Msa0168050 | Msa0548000 | 0.802007 | 6.880814e-49 | -8.615850e-47 |
| Msa0170070 | Msa0548000 | 0.832382 | 9.757837e-56 | -8.615850e-47 |
| Msa0186360 | Msa0548000 | 0.804109 | 2.529232e-49 | -8.615850e-47 |
| Msa0364680 | Msa0548000 | 0.821034 | 5.003922e-53 | -8.615850e-47 |
| Msa0367520 | Msa0548000 | 0.805003 | 1.646565e-49 | -8.615850e-47 |
| Msa0373170 | Msa0548000 | 0.862537 | 4.725499e-64 | -8.615850e-47 |
| Msa0382230 | Msa0548000 | 0.824650 | 7.195064e-54 | -8.615850e-47 |
| Msa0404770 | Msa0548000 | 0.810691 | 1.016393e-50 | -8.615850e-47 |
| Msa0412130 | Msa0548000 | 0.854405 | 1.258086e-61 | -8.615850e-47 |
| Msa0415140 | Msa0548000 | 0.814921 | 1.204411e-51 | -8.615850e-47 |
| Msa0415820 | Msa0548000 | 0.833707 | 4.568211e-56 | -8.615850e-47 |
| Msa0420670 | Msa0548000 | 0.827873 | 1.229849e-54 | -8.615850e-47 |
| Msa0421130 | Msa0548000 | 0.833105 | 6.455946e-56 | -8.615850e-47 |
| Msa0421750 | Msa0548000 | 0.858329 | 8.876337e-63 | -8.615850e-47 |
| Msa0433760 | Msa0548000 | 0.871051 | 9.171054e-67 | -8.615850e-47 |
| Msa0439080 | Msa0548000 | 0.808765 | 2.637654e-50 | -8.615850e-47 |
| Msa0443410 | Msa0548000 | 0.808476 | 3.039418e-50 | -8.615850e-47 |
| Msa0456670 | Msa0548000 | 0.858956 | 5.768517e-63 | -8.615850e-47 |
| Msa0460780 | Msa0548000 | 0.814620 | 1.404346e-51 | -8.615850e-47 |
| Msa0466520 | Msa0548000 | 0.848774 | 4.947241e-60 | -8.615850e-47 |
| Msa0466880 | Msa0548000 | 0.814467 | 1.518415e-51 | -8.615850e-47 |
| Msa0467690 | Msa0548000 | 0.862494 | 4.871065e-64 | -8.615850e-47 |
| Msa0468620 | Msa0548000 | 0.812112 | 4.995433e-51 | -8.615850e-47 |
| Msa0477630 | Msa0548000 | 0.862168 | 6.132893e-64 | -8.615850e-47 |
| Msa0480730 | Msa0548000 | 0.801102 | 1.054888e-48 | -8.615850e-47 |
| Msa0281540 | Msa0548000 | 0.828732 | 7.634240e-55 | -8.615850e-47 |
| Msa0320250 | Msa0548000 | 0.864095 | 1.556232e-64 | -8.615850e-47 |
| Msa0320270 | Msa0548000 | 0.863671 | 2.107177e-64 | -8.615850e-47 |
| Msa0320290 | Msa0548000 | 0.867522 | 1.286820e-65 | -8.615850e-47 |
| Msa0320580 | Msa0548000 | 0.828354 | 9.420621e-55 | -8.615850e-47 |
| Msa0344110 | Msa0548000 | 0.830328 | 3.124759e-55 | -8.615850e-47 |
| Msa0358060 | Msa0548000 | 0.821742 | 3.434546e-53 | -8.615850e-47 |
| Msa0503990 | Msa0548000 | 0.846094 | 2.695591e-59 | -8.615850e-47 |
| Msa0506540 | Msa0548000 | 0.823872 | 1.096465e-53 | -8.615850e-47 |
| Msa0506880 | Msa0548000 | 0.848521 | 5.811509e-60 | -8.615850e-47 |
| Msa0507020 | Msa0548000 | 0.852498 | 4.437415e-61 | -8.615850e-47 |
| Msa0507810 | Msa0548000 | 0.842937 | 1.905358e-58 | -8.615850e-47 |
| Msa0507820 | Msa0548000 | 0.829899 | 3.976563e-55 | -8.615850e-47 |
| Msa0507920 | Msa0548000 | 0.852720 | 3.836297e-61 | -8.615850e-47 |
| Msa0512530 | Msa0548000 | 0.827674 | 1.372797e-54 | -8.615850e-47 |
| Msa0513080 | Msa0548000 | 0.816974 | 4.193769e-52 | -8.615850e-47 |
| Msa0513560 | Msa0548000 | 0.819412 | 1.177581e-52 | -8.615850e-47 |
| Msa0514020 | Msa0548000 | 0.858698 | 6.891545e-63 | -8.615850e-47 |
| Msa0514500 | Msa0548000 | 0.811615 | 6.406748e-51 | -8.615850e-47 |
| Msa0520680 | Msa0548000 | 0.827715 | 1.342126e-54 | -8.615850e-47 |
| Msa0520870 | Msa0548000 | 0.825016 | 5.898879e-54 | -8.615850e-47 |
| Msa0521680 | Msa0548000 | 0.872886 | 2.252466e-67 | -8.615850e-47 |
| Msa0523380 | Msa0548000 | 0.813906 | 2.019341e-51 | -8.615850e-47 |
| Msa0527850 | Msa0548000 | 0.838288 | 3.143007e-57 | -8.615850e-47 |
| Msa0534100 | Msa0548000 | 0.815957 | 7.082833e-52 | -8.615850e-47 |
| Msa0541740 | Msa0548000 | 0.823112 | 1.650693e-53 | -8.615850e-47 |
| Msa0544410 | Msa0548000 | 0.810641 | 1.042186e-50 | -8.615850e-47 |
| Msa0548000 | Msa0550590 | 0.843708 | 1.186508e-58 | -8.615850e-47 |
| Msa0548000 | Msa0554300 | 0.851914 | 6.504751e-61 | -8.615850e-47 |
| Msa0548000 | Msa0559100 | 0.803720 | 3.046805e-49 | -8.615850e-47 |
| Msa0548000 | Msa0561560 | 0.877494 | 6.007786e-69 | -8.615850e-47 |
| Msa0548000 | Msa0563740 | 0.833618 | 4.809597e-56 | -8.615850e-47 |
| Msa0548000 | Msa0563900 | 0.829154 | 6.033188e-55 | -8.615850e-47 |
| Msa0548000 | Msa0563980 | 0.844341 | 8.029005e-59 | -8.615850e-47 |
| Msa0548000 | Msa0564980 | 0.829949 | 3.866364e-55 | -8.615850e-47 |
| Msa0548000 | Msa0568710 | 0.803526 | 3.342630e-49 | -8.615850e-47 |
| Msa0548000 | Msa0569530 | 0.813054 | 3.108330e-51 | -8.615850e-47 |
| Msa0548000 | Msa0571620 | 0.810903 | 9.143669e-51 | -8.615850e-47 |
| Msa0548000 | Msa0572830 | 0.841796 | 3.822979e-58 | -8.615850e-47 |
| Msa0548000 | Msa0577280 | 0.826014 | 3.422887e-54 | -8.615850e-47 |
| Msa0548000 | Msa0577330 | 0.828464 | 8.862708e-55 | -8.615850e-47 |
| Msa0548000 | Msa0582460 | 0.818647 | 1.757925e-52 | -8.615850e-47 |
| Msa0548000 | Msa0586200 | 0.839679 | 1.371362e-57 | -8.615850e-47 |
| Msa0548000 | Msa0590200 | 0.801240 | 9.883614e-49 | -8.615850e-47 |
| Msa0548000 | Msa0603410 | 0.876849 | 1.006526e-68 | -8.615850e-47 |
| Msa0548000 | Msa0606100 | 0.842272 | 2.861814e-58 | -8.615850e-47 |
| Msa0548000 | Msa0608350 | 0.836331 | 9.964871e-57 | -8.615850e-47 |
| Msa0548000 | Msa0613630 | 0.809551 | 1.789307e-50 | -8.615850e-47 |
| Msa0548000 | Msa0615630 | 0.833025 | 6.758793e-56 | -8.615850e-47 |
| Msa0548000 | Msa0620500 | 0.852307 | 5.029908e-61 | -8.615850e-47 |
| Msa0548000 | Msa0621710 | 0.814434 | 1.544053e-51 | -8.615850e-47 |
| Msa0548000 | Msa0622920 | 0.827037 | 1.951728e-54 | -8.615850e-47 |
| Msa0548000 | Msa0625620 | 0.828103 | 1.082711e-54 | -8.615850e-47 |
| Msa0548000 | Msa0640800 | 0.819551 | 1.094331e-52 | -8.615850e-47 |
| Msa0548000 | Msa0645340 | 0.891066 | 5.576832e-74 | -8.615850e-47 |
| Msa0548000 | Msa0647050 | 0.865799 | 4.543091e-65 | -8.615850e-47 |
| Msa0548000 | Msa0647440 | 0.830551 | 2.755519e-55 | -8.615850e-47 |
| Msa0548000 | Msa0648040 | 0.802904 | 4.496911e-49 | -8.615850e-47 |
| Msa0548000 | Msa0648760 | 0.854756 | 9.957381e-62 | -8.615850e-47 |
| Msa0548000 | Msa0654740 | 0.849431 | 3.247922e-60 | -8.615850e-47 |
| Msa0548000 | Msa0657210 | 0.810964 | 8.872206e-51 | -8.615850e-47 |
| Msa0548000 | Msa0659150 | 0.809200 | 2.128337e-50 | -8.615850e-47 |
| Msa0548000 | Msa0659200 | 0.821116 | 4.790980e-53 | -8.615850e-47 |
| Msa0548000 | Msa0668900 | 0.825220 | 5.279920e-54 | -8.615850e-47 |
| Msa0548000 | Msa0688620 | 0.825265 | 5.149511e-54 | -8.615850e-47 |
| Msa0548000 | Msa0690320 | 0.829254 | 5.705838e-55 | -8.615850e-47 |
| Msa0548000 | Msa0690740 | 0.814173 | 1.762761e-51 | -8.615850e-47 |
| Msa0548000 | Msa0691270 | 0.846408 | 2.213582e-59 | -8.615850e-47 |
| Msa0548000 | Msa0698730 | 0.840049 | 1.098544e-57 | -8.615850e-47 |
| Msa0548000 | Msa0700500 | 0.842981 | 1.855358e-58 | -8.615850e-47 |
| Msa0548000 | Msa0701250 | 0.824664 | 7.140197e-54 | -8.615850e-47 |
| Msa0548000 | Msa0705180 | 0.810718 | 1.002630e-50 | -8.615850e-47 |
| Msa0548000 | Msa0707260 | 0.801766 | 7.712145e-49 | -8.615850e-47 |
| Msa0548000 | Msa0713920 | 0.814819 | 1.268869e-51 | -8.615850e-47 |
| Msa0548000 | Msa0714520 | 0.827979 | 1.159815e-54 | -8.615850e-47 |
| Msa0548000 | Msa0717900 | 0.846170 | 2.569773e-59 | -8.615850e-47 |
| Msa0548000 | Msa0718040 | 0.821050 | 4.961014e-53 | -8.615850e-47 |
| Msa0548000 | Msa0720280 | 0.871689 | 5.643657e-67 | -8.615850e-47 |
| Msa0548000 | Msa0737130 | 0.812757 | 3.609730e-51 | -8.615850e-47 |
| Msa0548000 | Msa0740710 | 0.810238 | 1.273191e-50 | -8.615850e-47 |
| Msa0548000 | Msa0745720 | 0.816029 | 6.824482e-52 | -8.615850e-47 |
| Msa0548000 | Msa0747740 | 0.835642 | 1.489627e-56 | -8.615850e-47 |
| Msa0548000 | Msa0749190 | 0.815588 | 8.560146e-52 | -8.615850e-47 |
| Msa0548000 | Msa0750520 | 0.823644 | 1.239352e-53 | -8.615850e-47 |
| Msa0548000 | Msa0756180 | 0.810638 | 1.043307e-50 | -8.615850e-47 |
| Msa0548000 | Msa0758590 | 0.815466 | 9.112517e-52 | -8.615850e-47 |
| Msa0548000 | Msa0773630 | 0.808386 | 3.176781e-50 | -8.615850e-47 |
| Msa0548000 | Msa0778600 | 0.814288 | 1.662812e-51 | -8.615850e-47 |
| Msa0548000 | Msa0780910 | 0.819320 | 1.235574e-52 | -8.615850e-47 |
| Msa0548000 | Msa0800660 | 0.830757 | 2.453227e-55 | -8.615850e-47 |
| Msa0548000 | Msa0803140 | 0.864571 | 1.104590e-64 | -8.615850e-47 |
| Msa0548000 | Msa0811020 | 0.815291 | 9.969178e-52 | -8.615850e-47 |
| Msa0548000 | Msa0816080 | 0.842407 | 2.635167e-58 | -8.615850e-47 |
| Msa0548000 | Msa0816230 | 0.842911 | 1.935680e-58 | -8.615850e-47 |
| Msa0548000 | Msa0821160 | 0.828330 | 9.545537e-55 | -8.615850e-47 |
| Msa0548000 | Msa0837460 | 0.801101 | 1.055173e-48 | -8.615850e-47 |
| Msa0548000 | Msa0841500 | 0.857921 | 1.174167e-62 | -8.615850e-47 |
| Msa0548000 | Msa0861440 | 0.803487 | 3.405389e-49 | -8.615850e-47 |
| Msa0548000 | Msa0866530 | 0.828702 | 7.760886e-55 | -8.615850e-47 |
| Msa0548000 | Msa0867110 | 0.812591 | 3.925176e-51 | -8.615850e-47 |
| Msa0548000 | Msa0879920 | 0.819778 | 9.711418e-53 | -8.615850e-47 |
| Msa0548000 | Msa0900090 | 0.818167 | 2.257291e-52 | -8.615850e-47 |
| Msa0548000 | Msa0900760 | 0.835507 | 1.611779e-56 | -8.615850e-47 |
| Msa0548000 | Msa0909760 | 0.865347 | 6.306258e-65 | -8.615850e-47 |
| Msa0548000 | Msa0924430 | 0.824877 | 6.361521e-54 | -8.615850e-47 |
| Msa0548000 | Msa0926310 | 0.810321 | 1.221812e-50 | -8.615850e-47 |
| Msa0548000 | Msa0931590 | 0.818294 | 2.113016e-52 | -8.615850e-47 |
| Msa0548000 | Msa0966710 | 0.812086 | 5.060258e-51 | -8.615850e-47 |
| Msa0548000 | Msa1000780 | 0.820813 | 5.625890e-53 | -8.615850e-47 |
| Msa0548000 | Msa1000970 | 0.810872 | 9.288014e-51 | -8.615850e-47 |
| Msa0548000 | Msa1008670 | 0.883214 | 5.423803e-71 | -8.615850e-47 |
| Msa0548000 | Msa1008680 | 0.858690 | 6.927076e-63 | -8.615850e-47 |
| Msa0548000 | Msa1018960 | 0.823666 | 1.225041e-53 | -8.615850e-47 |
| Msa0548000 | Msa1033920 | 0.884200 | 2.348953e-71 | -8.615850e-47 |
| Msa0548000 | Msa1035650 | 0.820125 | 8.089795e-53 | -8.615850e-47 |
| Msa0548000 | Msa1036090 | 0.829358 | 5.384022e-55 | -8.615850e-47 |
| Msa0548000 | Msa1060900 | 0.830638 | 2.623312e-55 | -8.615850e-47 |
| Msa0548000 | Msa1071410 | 0.824526 | 7.695239e-54 | -8.615850e-47 |
| Msa0548000 | Msa1076020 | 0.870559 | 1.331393e-66 | -8.615850e-47 |
| Msa0548000 | Msa1078860 | 0.821585 | 3.734610e-53 | -8.615850e-47 |
| Msa0548000 | Msa1078880 | 0.805028 | 1.626781e-49 | -8.615850e-47 |
| Msa0548000 | Msa1078970 | 0.800784 | 1.224936e-48 | -8.615850e-47 |
| Msa0548000 | Msa1078990 | 0.828332 | 9.535958e-55 | -8.615850e-47 |
| Msa0548000 | Msa1079640 | 0.800051 | 1.727372e-48 | -8.615850e-47 |
| Msa0548000 | Msa1082380 | 0.861111 | 1.290442e-63 | -8.615850e-47 |
| Msa0548000 | Msa1084530 | 0.800091 | 1.695524e-48 | -8.615850e-47 |
| Msa0548000 | Msa1106220 | 0.822163 | 2.744566e-53 | -8.615850e-47 |
| Msa0548000 | Msa1114630 | 0.812129 | 4.950844e-51 | -8.615850e-47 |
| Msa0548000 | Msa1116190 | 0.822978 | 1.773257e-53 | -8.615850e-47 |
| Msa0548000 | Msa1116660 | 0.864635 | 1.055316e-64 | -8.615850e-47 |
| Msa0548000 | Msa1116740 | 0.859010 | 5.559438e-63 | -8.615850e-47 |
| Msa0548000 | Msa1122560 | 0.832406 | 9.629717e-56 | -8.615850e-47 |
| Msa0548000 | Msa1125820 | 0.805044 | 1.614195e-49 | -8.615850e-47 |
| Msa0548000 | Msa1125990 | 0.801127 | 1.042683e-48 | -8.615850e-47 |
| Msa0548000 | Msa1127280 | 0.850987 | 1.189611e-60 | -8.615850e-47 |
| Msa0548000 | Msa1127470 | 0.806558 | 7.761847e-50 | -8.615850e-47 |
| Msa0548000 | Msa1132530 | 0.815621 | 8.418192e-52 | -8.615850e-47 |
| Msa0548000 | Msa1134790 | 0.809230 | 2.097342e-50 | -8.615850e-47 |
| Msa0548000 | Msa1139050 | 0.855947 | 4.481919e-62 | -8.615850e-47 |
| Msa0548000 | Msa1148630 | 0.821891 | 3.172448e-53 | -8.615850e-47 |
| Msa0548000 | Msa1149450 | 0.809940 | 1.475788e-50 | -8.615850e-47 |
| Msa0548000 | Msa1159590 | 0.811549 | 6.622768e-51 | -8.615850e-47 |
| Msa0548000 | Msa1162880 | 0.903882 | 2.190999e-79 | -8.615850e-47 |
| Msa0548000 | Msa1163180 | 0.851413 | 9.021948e-61 | -8.615850e-47 |
| Msa0548000 | Msa1163350 | 0.836293 | 1.018959e-56 | -8.615850e-47 |
| Msa0548000 | Msa1165480 | 0.856116 | 3.999276e-62 | -8.615850e-47 |
| Msa0548000 | Msa1169170 | 0.820814 | 5.621591e-53 | -8.615850e-47 |
| Msa0548000 | Msa1169190 | 0.801854 | 7.397341e-49 | -8.615850e-47 |
| Msa0548000 | Msa1169690 | 0.817764 | 2.783963e-52 | -8.615850e-47 |
| Msa0548000 | Msa1188790 | 0.825003 | 5.938994e-54 | -8.615850e-47 |
| Msa0548000 | Msa1190390 | 0.837580 | 4.781334e-57 | -8.615850e-47 |
| Msa0548000 | Msa1191000 | 0.821056 | 4.946070e-53 | -8.615850e-47 |
| Msa0548000 | Msa1214350 | 0.810282 | 1.245319e-50 | -8.615850e-47 |
| Msa0548000 | Msa1215980 | 0.853160 | 2.871056e-61 | -8.615850e-47 |
| Msa0548000 | Msa1218820 | 0.816368 | 5.731843e-52 | -8.615850e-47 |
| Msa0548000 | Msa1219770 | 0.820627 | 6.208186e-53 | -8.615850e-47 |
| Msa0548000 | Msa1223390 | 0.804847 | 1.775041e-49 | -8.615850e-47 |
| Msa0548000 | Msa1231780 | 0.814580 | 1.433048e-51 | -8.615850e-47 |
| Msa0548000 | Msa1254420 | 0.824097 | 9.706675e-54 | -8.615850e-47 |
| Msa0548000 | Msa1254540 | 0.838706 | 2.452047e-57 | -8.615850e-47 |
| Msa0548000 | Msa1261050 | 0.835522 | 1.598150e-56 | -8.615850e-47 |
| Msa0548000 | Msa1263740 | 0.805758 | 1.143848e-49 | -8.615850e-47 |
| Msa0548000 | Msa1263780 | 0.811031 | 8.580191e-51 | -8.615850e-47 |
| Msa0548000 | Msa1266690 | 0.800866 | 1.178766e-48 | -8.615850e-47 |
| Msa0548000 | Msa1267930 | 0.823823 | 1.125533e-53 | -8.615850e-47 |
| Msa0548000 | Msa1268540 | 0.810828 | 9.491539e-51 | -8.615850e-47 |
| Msa0548000 | Msa1294460 | 0.823719 | 1.190790e-53 | -8.615850e-47 |
| Msa0548000 | Msa1294790 | 0.842901 | 1.947845e-58 | -8.615850e-47 |
| Msa0548000 | Msa1300460 | 0.829971 | 3.818858e-55 | -8.615850e-47 |
| Msa0548000 | Msa1301820 | 0.823869 | 1.097957e-53 | -8.615850e-47 |
| Msa0548000 | Msa1305780 | 0.852104 | 5.746134e-61 | -8.615850e-47 |
| Msa0548000 | Msa1305920 | 0.803399 | 3.550970e-49 | -8.615850e-47 |
| Msa0548000 | Msa1332950 | 0.825275 | 5.123715e-54 | -8.615850e-47 |
| Msa0548000 | Msa1339170 | 0.851217 | 1.024513e-60 | -8.615850e-47 |
| Msa0548000 | Msa1339230 | 0.892232 | 1.918311e-74 | -8.615850e-47 |
| Msa0548000 | Msa1361930 | 0.856552 | 2.979194e-62 | -8.615850e-47 |
| Msa0548000 | Msa1362130 | 0.809665 | 1.690991e-50 | -8.615850e-47 |
| Msa0548000 | Msa1364410 | 0.823889 | 1.086149e-53 | -8.615850e-47 |
| Msa0548000 | Msa1375350 | 0.800441 | 1.439374e-48 | -8.615850e-47 |
| Msa0548000 | Msa1381470 | 0.865626 | 5.153841e-65 | -8.615850e-47 |
| Msa0548000 | Msa1381800 | 0.828649 | 7.996040e-55 | -8.615850e-47 |
| Msa0548000 | Msa1387500 | 0.820282 | 7.449332e-53 | -8.615850e-47 |
| Msa0548000 | Msa1393560 | 0.821440 | 4.032409e-53 | -8.615850e-47 |
| Msa0548000 | Msa1399190 | 0.833166 | 6.232905e-56 | -8.615850e-47 |
| Msa0548000 | Msa1406720 | 0.844076 | 9.457699e-59 | -8.615850e-47 |
| Msa0548000 | Msa1410190 | 0.867241 | 1.582601e-65 | -8.615850e-47 |
| Msa0548000 | Msa1417060 | 0.805659 | 1.199562e-49 | -8.615850e-47 |
| Msa0548000 | Msa1424370 | 0.803065 | 4.164045e-49 | -8.615850e-47 |
| Msa0548000 | Msa1426320 | 0.831097 | 2.024878e-55 | -8.615850e-47 |
| Msa0548000 | Msa1432520 | 0.802874 | 4.561452e-49 | -8.615850e-47 |
| Msa0548000 | Msa1434640 | 0.828278 | 9.824691e-55 | -8.615850e-47 |
| Msa0548000 | Msa1435100 | 0.820736 | 5.859589e-53 | -8.615850e-47 |
| Msa0548000 | Msa1439730 | 0.830255 | 3.256038e-55 | -8.615850e-47 |
| Msa0548000 | Msa1442260 | 0.856067 | 4.132148e-62 | -8.615850e-47 |
| Msa0548000 | Msa1447170 | 0.872928 | 2.181166e-67 | -8.615850e-47 |
| Msa0548000 | Msa1457840 | 0.801213 | 1.001352e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0548000 | MtrunA17_Chr4g0031001 | 96.000 | 150 | 4 | 1 | 117 | 266 | 1 | 148 | 3.23e-95 | 276 |
| Msa0548000 | MtrunA17_Chr4g0031001 | 94.783 | 115 | 2 | 1 | 1 | 111 | 1 | 115 | 8.99e-69 | 209 |
| Msa0548000 | MtrunA17_Chr4g0031651 | 95.333 | 150 | 5 | 1 | 117 | 266 | 1 | 148 | 1.86e-94 | 274 |
| Msa0548000 | MtrunA17_Chr4g0031651 | 94.783 | 115 | 2 | 1 | 1 | 111 | 1 | 115 | 7.31e-69 | 209 |
| Msa0548000 | MtrunA17_Chr2g0327951 | 88.742 | 151 | 15 | 1 | 116 | 266 | 37 | 185 | 1.24e-83 | 248 |
| Msa0548000 | MtrunA17_Chr2g0327951 | 87.826 | 115 | 8 | 2 | 1 | 111 | 38 | 150 | 7.76e-57 | 180 |
| Msa0548000 | MtrunA17_Chr4g0035621 | 94.079 | 152 | 7 | 1 | 117 | 266 | 1 | 152 | 3.04e-81 | 241 |
| Msa0548000 | MtrunA17_Chr4g0035621 | 95.652 | 115 | 1 | 1 | 1 | 111 | 1 | 115 | 1.14e-56 | 178 |
| Msa0548000 | MtrunA17_Chr4g0031041 | 94.697 | 132 | 6 | 1 | 136 | 266 | 14 | 145 | 1.17e-80 | 239 |
| Msa0548000 | MtrunA17_Chr4g0031041 | 94.792 | 96 | 1 | 1 | 20 | 111 | 14 | 109 | 1.16e-55 | 176 |
| Msa0548000 | MtrunA17_Chr4g0032301 | 94.667 | 150 | 6 | 1 | 117 | 266 | 1 | 148 | 3.17e-80 | 238 |
| Msa0548000 | MtrunA17_Chr4g0032301 | 93.913 | 115 | 3 | 1 | 1 | 111 | 1 | 115 | 1.65e-54 | 172 |
| Msa0548000 | MtrunA17_Chr2g0327931 | 89.610 | 154 | 11 | 2 | 117 | 266 | 1 | 153 | 8.53e-78 | 232 |
| Msa0548000 | MtrunA17_Chr2g0327931 | 95.652 | 92 | 0 | 1 | 24 | 111 | 23 | 114 | 1.14e-53 | 171 |
| Msa0548000 | MtrunA17_Chr8g0379311 | 96.970 | 132 | 4 | 0 | 117 | 248 | 1 | 132 | 1.86e-73 | 221 |
| Msa0548000 | MtrunA17_Chr8g0379311 | 95.652 | 115 | 1 | 1 | 1 | 111 | 1 | 115 | 2.73e-56 | 177 |
| Msa0548000 | MtrunA17_Chr7g0272611 | 80.451 | 133 | 25 | 1 | 126 | 258 | 13 | 144 | 7.64e-70 | 211 |
| Msa0548000 | MtrunA17_Chr7g0272611 | 80.189 | 106 | 16 | 2 | 10 | 111 | 13 | 117 | 8.29e-51 | 163 |
| Msa0548000 | MtrunA17_Chr7g0268831 | 72.093 | 129 | 36 | 0 | 120 | 248 | 2 | 130 | 6.67e-58 | 181 |
| Msa0548000 | MtrunA17_Chr7g0268831 | 72.566 | 113 | 21 | 4 | 4 | 111 | 6 | 113 | 2.29e-45 | 149 |
| Msa0548000 | MtrunA17_Chr7g0273351 | 73.077 | 130 | 31 | 1 | 119 | 248 | 2 | 127 | 1.09e-57 | 181 |
| Msa0548000 | MtrunA17_Chr7g0273351 | 71.681 | 113 | 24 | 2 | 3 | 111 | 2 | 110 | 2.30e-45 | 149 |
| Msa0548000 | MtrunA17_Chr7g0259151 | 73.438 | 128 | 31 | 2 | 119 | 245 | 2 | 127 | 2.43e-57 | 180 |
| Msa0548000 | MtrunA17_Chr7g0259151 | 69.643 | 112 | 27 | 2 | 4 | 111 | 5 | 113 | 2.39e-44 | 146 |
| Msa0548000 | MtrunA17_Chr7g0273331 | 69.853 | 136 | 38 | 2 | 114 | 248 | 50 | 183 | 2.62e-57 | 181 |
| Msa0548000 | MtrunA17_Chr7g0273331 | 71.681 | 113 | 24 | 2 | 3 | 111 | 58 | 166 | 8.95e-45 | 149 |
| Msa0548000 | MtrunA17_Chr2g0319191 | 74.790 | 119 | 30 | 0 | 127 | 245 | 3 | 121 | 5.72e-57 | 178 |
| Msa0548000 | MtrunA17_Chr2g0319191 | 72.381 | 105 | 25 | 1 | 11 | 111 | 3 | 107 | 5.13e-44 | 145 |
| Msa0548000 | MtrunA17_Chr2g0319181 | 73.950 | 119 | 31 | 0 | 127 | 245 | 3 | 121 | 5.26e-56 | 176 |
| Msa0548000 | MtrunA17_Chr2g0319181 | 71.429 | 105 | 26 | 1 | 11 | 111 | 3 | 107 | 3.56e-43 | 143 |
| Msa0548000 | MtrunA17_Chr6g0449661 | 63.780 | 127 | 32 | 3 | 140 | 265 | 85 | 198 | 2.21e-45 | 151 |
| Msa0548000 | MtrunA17_Chr6g0449661 | 61.290 | 93 | 23 | 3 | 24 | 111 | 85 | 169 | 1.55e-27 | 105 |
| Msa0548000 | MtrunA17_Chr3g0119971 | 63.492 | 126 | 32 | 3 | 141 | 265 | 81 | 193 | 5.31e-45 | 150 |
| Msa0548000 | MtrunA17_Chr3g0119971 | 61.957 | 92 | 22 | 3 | 25 | 111 | 81 | 164 | 1.50e-27 | 105 |
| Msa0548000 | MtrunA17_Chr4g0031031 | 75.238 | 105 | 21 | 1 | 161 | 265 | 10 | 109 | 4.70e-44 | 145 |
| Msa0548000 | MtrunA17_Chr4g0031031 | 87.324 | 71 | 5 | 1 | 45 | 111 | 10 | 80 | 4.93e-34 | 119 |
| Msa0548000 | MtrunA17_Chr7g0273341 | 70.909 | 110 | 21 | 2 | 139 | 248 | 57 | 155 | 1.16e-43 | 145 |
| Msa0548000 | MtrunA17_Chr7g0273341 | 67.742 | 93 | 15 | 3 | 23 | 111 | 57 | 138 | 1.69e-30 | 112 |
| Msa0548000 | MtrunA17_Chr1g0148961 | 59.292 | 113 | 44 | 2 | 137 | 248 | 23 | 134 | 2.37e-34 | 120 |
| Msa0548000 | MtrunA17_Chr1g0148961 | 61.458 | 96 | 31 | 2 | 21 | 111 | 23 | 117 | 6.38e-28 | 104 |
| Msa0548000 | MtrunA17_Chr1g0148951 | 59.292 | 113 | 44 | 2 | 137 | 248 | 23 | 134 | 2.37e-34 | 120 |
| Msa0548000 | MtrunA17_Chr1g0148951 | 61.458 | 96 | 31 | 2 | 21 | 111 | 23 | 117 | 6.38e-28 | 104 |
| Msa0548000 | MtrunA17_Chr1g0211651 | 59.633 | 109 | 42 | 2 | 137 | 244 | 20 | 127 | 2.70e-33 | 118 |
| Msa0548000 | MtrunA17_Chr1g0211651 | 58.333 | 96 | 34 | 2 | 21 | 111 | 20 | 114 | 6.91e-27 | 101 |
| Msa0548000 | MtrunA17_Chr1g0184901 | 61.538 | 104 | 38 | 2 | 142 | 244 | 28 | 130 | 1.92e-32 | 115 |
| Msa0548000 | MtrunA17_Chr1g0184901 | 61.538 | 91 | 29 | 2 | 26 | 111 | 28 | 117 | 7.76e-27 | 101 |
| Msa0548000 | MtrunA17_Chr1g0183701 | 60.274 | 73 | 29 | 0 | 183 | 255 | 30 | 102 | 2.44e-24 | 94.0 |
| Msa0548000 | MtrunA17_Chr1g0183701 | 69.388 | 49 | 15 | 0 | 63 | 111 | 30 | 78 | 2.49e-16 | 72.8 |
| Msa0548000 | MtrunA17_Chr4g0024701 | 49.524 | 105 | 33 | 2 | 140 | 244 | 26 | 110 | 1.16e-20 | 84.7 |
| Msa0548000 | MtrunA17_Chr4g0024701 | 51.136 | 88 | 27 | 2 | 24 | 111 | 26 | 97 | 4.62e-16 | 72.4 |
| Msa0548000 | MtrunA17_Chr4g0000531 | 71.111 | 45 | 13 | 0 | 201 | 245 | 5 | 49 | 6.02e-15 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0548000 | AT5G02560.1 | 81.699 | 153 | 25 | 1 | 117 | 266 | 1 | 153 | 2.82e-77 | 231 |
| Msa0548000 | AT5G02560.1 | 80.870 | 115 | 18 | 1 | 1 | 111 | 1 | 115 | 1.01e-53 | 171 |
| Msa0548000 | AT5G02560.2 | 70.621 | 177 | 25 | 2 | 117 | 266 | 1 | 177 | 1.99e-72 | 220 |
| Msa0548000 | AT5G02560.2 | 66.906 | 139 | 18 | 2 | 1 | 111 | 1 | 139 | 1.76e-48 | 159 |
| Msa0548000 | AT5G27670.1 | 75.000 | 152 | 34 | 3 | 117 | 266 | 1 | 150 | 5.55e-71 | 215 |
| Msa0548000 | AT5G27670.1 | 65.333 | 150 | 27 | 4 | 1 | 126 | 1 | 149 | 3.24e-53 | 170 |
| Msa0548000 | AT5G59870.1 | 74.324 | 148 | 37 | 1 | 120 | 266 | 3 | 150 | 1.74e-69 | 211 |
| Msa0548000 | AT5G59870.1 | 77.876 | 113 | 20 | 2 | 4 | 111 | 3 | 115 | 1.99e-53 | 170 |
| Msa0548000 | AT1G51060.1 | 72.093 | 129 | 36 | 0 | 127 | 255 | 3 | 131 | 8.41e-60 | 186 |
| Msa0548000 | AT1G51060.1 | 74.286 | 105 | 23 | 1 | 11 | 111 | 3 | 107 | 1.85e-45 | 149 |
| Msa0548000 | AT4G27230.2 | 70.543 | 129 | 38 | 0 | 127 | 255 | 3 | 131 | 1.12e-58 | 183 |
| Msa0548000 | AT4G27230.2 | 73.333 | 105 | 24 | 1 | 11 | 111 | 3 | 107 | 6.71e-45 | 148 |
| Msa0548000 | AT4G27230.1 | 70.543 | 129 | 38 | 0 | 127 | 255 | 3 | 131 | 1.12e-58 | 183 |
| Msa0548000 | AT4G27230.1 | 73.333 | 105 | 24 | 1 | 11 | 111 | 3 | 107 | 6.71e-45 | 148 |
| Msa0548000 | AT3G20670.1 | 71.318 | 129 | 37 | 0 | 127 | 255 | 3 | 131 | 2.27e-58 | 182 |
| Msa0548000 | AT3G20670.1 | 73.333 | 105 | 24 | 1 | 11 | 111 | 3 | 107 | 2.70e-44 | 146 |
| Msa0548000 | AT5G54640.1 | 72.000 | 125 | 35 | 0 | 127 | 251 | 3 | 127 | 8.44e-57 | 178 |
| Msa0548000 | AT5G54640.1 | 72.381 | 105 | 25 | 1 | 11 | 111 | 3 | 107 | 1.47e-43 | 144 |
| Msa0548000 | AT1G08880.1 | 73.600 | 125 | 30 | 2 | 127 | 248 | 6 | 130 | 2.09e-56 | 177 |
| Msa0548000 | AT1G08880.1 | 70.536 | 112 | 26 | 3 | 7 | 111 | 2 | 113 | 2.36e-44 | 147 |
| Msa0548000 | AT1G54690.1 | 73.600 | 125 | 30 | 2 | 127 | 248 | 6 | 130 | 3.22e-56 | 177 |
| Msa0548000 | AT1G54690.1 | 71.053 | 114 | 23 | 4 | 3 | 111 | 5 | 113 | 9.22e-44 | 145 |
| Msa0548000 | AT2G38810.1 | 59.821 | 112 | 43 | 2 | 137 | 247 | 25 | 135 | 9.77e-35 | 122 |
| Msa0548000 | AT2G38810.1 | 60.417 | 96 | 32 | 2 | 21 | 111 | 25 | 119 | 1.40e-28 | 106 |
| Msa0548000 | AT2G38810.4 | 59.821 | 112 | 43 | 2 | 137 | 247 | 25 | 135 | 9.77e-35 | 122 |
| Msa0548000 | AT2G38810.4 | 60.417 | 96 | 32 | 2 | 21 | 111 | 25 | 119 | 1.40e-28 | 106 |
| Msa0548000 | AT2G38810.3 | 59.821 | 112 | 43 | 2 | 137 | 247 | 25 | 135 | 9.77e-35 | 122 |
| Msa0548000 | AT2G38810.3 | 60.417 | 96 | 32 | 2 | 21 | 111 | 25 | 119 | 1.40e-28 | 106 |
| Msa0548000 | AT2G38810.2 | 59.821 | 112 | 43 | 2 | 137 | 247 | 25 | 135 | 9.77e-35 | 122 |
| Msa0548000 | AT2G38810.2 | 60.417 | 96 | 32 | 2 | 21 | 111 | 25 | 119 | 1.40e-28 | 106 |
| Msa0548000 | AT1G52740.1 | 59.633 | 109 | 42 | 2 | 141 | 248 | 27 | 134 | 7.65e-33 | 117 |
| Msa0548000 | AT1G52740.1 | 61.957 | 92 | 29 | 2 | 25 | 111 | 27 | 117 | 5.54e-27 | 102 |
| Msa0548000 | AT3G54560.1 | 58.716 | 109 | 43 | 2 | 141 | 248 | 29 | 136 | 1.08e-32 | 117 |
| Msa0548000 | AT3G54560.1 | 59.783 | 92 | 31 | 2 | 25 | 111 | 29 | 119 | 3.24e-26 | 100 |
| Msa0548000 | AT3G54560.2 | 58.716 | 109 | 43 | 2 | 141 | 248 | 29 | 136 | 1.08e-32 | 117 |
| Msa0548000 | AT3G54560.2 | 59.783 | 92 | 31 | 2 | 25 | 111 | 29 | 119 | 3.24e-26 | 100 |
| Msa0548000 | AT4G13570.1 | 47.826 | 92 | 46 | 2 | 148 | 238 | 28 | 118 | 1.17e-18 | 79.7 |
| Msa0548000 | AT4G13570.1 | 45.122 | 82 | 40 | 1 | 32 | 108 | 28 | 109 | 4.19e-15 | 70.5 |
| Msa0548000 | AT4G13570.2 | 46.739 | 92 | 47 | 2 | 148 | 238 | 34 | 124 | 3.53e-18 | 78.6 |
| Msa0548000 | AT4G13570.2 | 43.902 | 82 | 41 | 1 | 32 | 108 | 34 | 115 | 1.16e-14 | 69.3 |
Find 75 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGACTTTCCAGCCTTCTT+TGG | 0.239817 | 4_1:+41713326 | None:intergenic |
| GATCAGATCTAAGCCTTCTT+TGG | 0.251178 | 4_1:+41713305 | None:intergenic |
| GGCTCCTTTCTTCGCGGTCT+TGG | 0.319054 | 4_1:+41713730 | None:intergenic |
| CTTGTCACCGACTTCTTCCT+TGG | 0.333455 | 4_1:+41713686 | None:intergenic |
| CTTGTCACCGACTTCTTCCT+TGG | 0.333455 | 4_1:+41714965 | None:intergenic |
| TTCTTTGGCTCTTTGTTAGC+AGG | 0.375405 | 4_1:+41713341 | None:intergenic |
| AGAACTGCTGCTAGGTATAC+TGG | 0.389575 | 4_1:+41713572 | None:intergenic |
| AGAACTGCTGCTAGGTATAC+TGG | 0.389575 | 4_1:+41714851 | None:intergenic |
| CAATTTCCAGTTGGAAGAAT+CGG | 0.397925 | 4_1:-41713644 | Msa0548000:CDS |
| CAATTTCCAGTTGGAAGAAT+CGG | 0.397925 | 4_1:-41714923 | Msa0548000:CDS |
| TCTTCTTAGGCAAGAGGATT+GGG | 0.401488 | 4_1:+41713378 | None:intergenic |
| GTCTTCTTAGGCAAGAGGAT+TGG | 0.405495 | 4_1:+41713377 | None:intergenic |
| TACGCTCAGCGTGTTGGAAC+AGG | 0.407073 | 4_1:-41713599 | Msa0548000:CDS |
| AAGAGGATTGGGTTAATGTT+TGG | 0.407916 | 4_1:+41713389 | None:intergenic |
| TGCTGCTGAAGTTCTTGAGT+TGG | 0.438702 | 4_1:-41714819 | Msa0548000:CDS |
| CTCAGAATCTCAGTTCGAAA+TGG | 0.441012 | 4_1:-41713762 | Msa0548000:intron |
| GGCATGTGTTGTTGGCTGTT+AGG | 0.442957 | 4_1:-41713472 | Msa0548000:CDS |
| GGCATGTGTTGTTGGCTGTT+AGG | 0.442957 | 4_1:-41714751 | Msa0548000:CDS |
| TGCTGCTGAAGTTCTTGAGT+TGG | 0.450757 | 4_1:-41713540 | Msa0548000:CDS |
| TCCTCCTCCTTTCCTTCCAC+CGG | 0.452471 | 4_1:+41713709 | None:intergenic |
| TCCTCCTCCTTTCCTTCCAC+CGG | 0.452471 | 4_1:+41714988 | None:intergenic |
| AGCACCAAGACCGCGAAGAA+AGG | 0.452810 | 4_1:-41713734 | Msa0548000:CDS |
| AACAAAGAGCCAAAGAAGGC+TGG | 0.466354 | 4_1:-41713335 | Msa0548000:CDS |
| TATTCCAAGGCATGTGTTGT+TGG | 0.470522 | 4_1:-41713480 | Msa0548000:CDS |
| GCTGAAGTTCTTGAGTTGGC+TGG | 0.471187 | 4_1:-41713536 | Msa0548000:CDS |
| GCTGAAGTTCTTGAGTTGGC+TGG | 0.471187 | 4_1:-41714815 | Msa0548000:CDS |
| AAGGGAGCCGGTGGAAGGAA+AGG | 0.471425 | 4_1:-41714995 | Msa0548000:CDS |
| AAAGGAGCCGGTGGAAGGAA+AGG | 0.476592 | 4_1:-41713716 | Msa0548000:CDS |
| TATCGACCGATTCTTCCAAC+TGG | 0.484363 | 4_1:+41713638 | None:intergenic |
| TATCGACCGATTCTTCCAAC+TGG | 0.484363 | 4_1:+41714917 | None:intergenic |
| GCCGGTGGAAGGAAAGGAGG+AGG | 0.487329 | 4_1:-41713710 | Msa0548000:CDS |
| AATTCCAAGGCATGTGTTGT+TGG | 0.490560 | 4_1:-41714759 | Msa0548000:CDS |
| GAGCTTGGTAAATTACTTGC+TGG | 0.499780 | 4_1:-41713440 | Msa0548000:CDS |
| GAGCTTGGTAAATTACTTGC+TGG | 0.499780 | 4_1:-41714719 | Msa0548000:CDS |
| ACAGCCAACAACACATGCCT+TGG | 0.515073 | 4_1:+41713476 | None:intergenic |
| ACAGCCAACAACACATGCCT+TGG | 0.515073 | 4_1:+41714755 | None:intergenic |
| GCCGGTGGAAGGAAAGGAGG+AGG | 0.517219 | 4_1:-41714989 | Msa0548000:CDS |
| ATCGGTCGATACTTGAAGAA+AGG | 0.519021 | 4_1:-41713626 | Msa0548000:CDS |
| ATCGGTCGATACTTGAAGAA+AGG | 0.519021 | 4_1:-41714905 | Msa0548000:CDS |
| AAGCACTAAGACAACAAAGA+AGG | 0.521698 | 4_1:-41715014 | Msa0548000:CDS |
| GGCTGGAAAGTCTCCAAAGA+AGG | 0.525629 | 4_1:-41713318 | Msa0548000:CDS |
| GGAAGATACGCTCAGCGTGT+TGG | 0.531317 | 4_1:-41713605 | Msa0548000:CDS |
| TCCACCGGCTCCTTTCTTCG+CGG | 0.538173 | 4_1:+41713724 | None:intergenic |
| TCCAACTGGAAATTGAAGAC+CGG | 0.540370 | 4_1:+41713652 | None:intergenic |
| TCCAACTGGAAATTGAAGAC+CGG | 0.540370 | 4_1:+41714931 | None:intergenic |
| CAAAGAAGGGAGCCGGTGGA+AGG | 0.542230 | 4_1:-41715000 | Msa0548000:CDS |
| TGCTAACAAAGAGCCAAAGA+AGG | 0.544648 | 4_1:-41713339 | Msa0548000:CDS |
| GGAGCCGGTGGAAGGAAAGG+AGG | 0.549135 | 4_1:-41714992 | Msa0548000:CDS |
| TTTCAGTCTTCTTAGGCAAG+AGG | 0.549625 | 4_1:+41713372 | None:intergenic |
| CGAAGAAAGGAGCCGGTGGA+AGG | 0.552463 | 4_1:-41713721 | Msa0548000:CDS |
| GTTAGGAACGATGAAGAGCT+TGG | 0.552797 | 4_1:-41713455 | Msa0548000:CDS |
| GTTAGGAACGATGAAGAGCT+TGG | 0.552797 | 4_1:-41714734 | Msa0548000:CDS |
| GAAGGAAAGGAGGAGGACCA+AGG | 0.555100 | 4_1:-41713703 | Msa0548000:CDS |
| GAAGGAAAGGAGGAGGACCA+AGG | 0.555100 | 4_1:-41714982 | Msa0548000:CDS |
| GCTGGTGTCACAATTGCTCA+TGG | 0.556477 | 4_1:-41713422 | Msa0548000:CDS |
| GCTGGTGTCACAATTGCTCA+TGG | 0.556477 | 4_1:-41714701 | Msa0548000:CDS |
| GGAGCCGGTGGAAGGAAAGG+AGG | 0.561766 | 4_1:-41713713 | Msa0548000:CDS |
| GCCGGTCTTCAATTTCCAGT+TGG | 0.566234 | 4_1:-41713653 | Msa0548000:CDS |
| GCCGGTCTTCAATTTCCAGT+TGG | 0.566234 | 4_1:-41714932 | Msa0548000:CDS |
| AAGACCGCGAAGAAAGGAGC+CGG | 0.590011 | 4_1:-41713728 | Msa0548000:CDS |
| GGTATTCAAGAACTGCTGCT+AGG | 0.591966 | 4_1:+41713564 | None:intergenic |
| GATATTCAAGAACTGCTGCT+AGG | 0.592671 | 4_1:+41714843 | None:intergenic |
| AGCACTAAGACAACAAAGAA+GGG | 0.593831 | 4_1:-41715013 | Msa0548000:CDS |
| GTGACAAGATCAATCAGAGC+CGG | 0.601599 | 4_1:-41713671 | Msa0548000:CDS |
| GTGACAAGATCAATCAGAGC+CGG | 0.601599 | 4_1:-41714950 | Msa0548000:CDS |
| ACCGCGAAGAAAGGAGCCGG+TGG | 0.603380 | 4_1:-41713725 | Msa0548000:CDS |
| AAGACAACAAAGAAGGGAGC+CGG | 0.603432 | 4_1:-41715007 | Msa0548000:CDS |
| AGGAGGACCAAGGAAGAAGT+CGG | 0.610829 | 4_1:-41713693 | Msa0548000:CDS |
| AGGAGGACCAAGGAAGAAGT+CGG | 0.610829 | 4_1:-41714972 | Msa0548000:CDS |
| AGAAGAATAGAATTATTCCA+AGG | 0.617592 | 4_1:-41713493 | Msa0548000:CDS |
| AGAAGAATAGAATAATTCCA+AGG | 0.617592 | 4_1:-41714772 | Msa0548000:CDS |
| ACAACAAAGAAGGGAGCCGG+TGG | 0.643589 | 4_1:-41715004 | Msa0548000:CDS |
| ACTCAAGAACTTCAGCAGCA+AGG | 0.647690 | 4_1:+41713543 | None:intergenic |
| GGTGTCACAATTGCTCATGG+TGG | 0.701079 | 4_1:-41713419 | Msa0548000:CDS |
| GGTGTCACAATTGCTCATGG+TGG | 0.701079 | 4_1:-41714698 | Msa0548000:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAAAATAAGTATATATAT+CGG | + | chr4_1:41714026-41714045 | None:intergenic | 10.0% |
| !!! | TAATTAATTTATTTTTTGCA+TGG | - | chr4_1:41714057-41714076 | Msa0548000:intron | 10.0% |
| !! | ATGAAAATAAGTATATATAT+CGG | + | chr4_1:41714026-41714045 | None:intergenic | 10.0% |
| !!! | TAATTAATTTATTTTTTGCA+TGG | - | chr4_1:41714057-41714076 | Msa0548000:intron | 10.0% |
| !!! | TGGTAATTTATTTTATTTTG+TGG | - | chr4_1:41714077-41714096 | Msa0548000:intron | 15.0% |
| !! | TTTATTTATTAAGAGTAAAC+AGG | - | chr4_1:41714200-41714219 | Msa0548000:intron | 15.0% |
| !!! | TGGTAATTTATTTTATTTTG+TGG | - | chr4_1:41714077-41714096 | Msa0548000:intron | 15.0% |
| !! | TTTATTTATTAAGAGTAAAC+AGG | - | chr4_1:41714200-41714219 | Msa0548000:intron | 15.0% |
| !!! | TTTTGTTCATATCTAAGATT+AGG | - | chr4_1:41713790-41713809 | Msa0548000:intron | 20.0% |
| !! | AGTAAACAGGAAATAAAAAA+GGG | - | chr4_1:41714213-41714232 | Msa0548000:intron | 20.0% |
| !! | AGAATTTGATGAATGAATTT+GGG | + | chr4_1:41714506-41714525 | None:intergenic | 20.0% |
| !!! | TTTTGTTCATATCTAAGATT+AGG | - | chr4_1:41713790-41713809 | Msa0548000:intron | 20.0% |
| !! | AGTAAACAGGAAATAAAAAA+GGG | - | chr4_1:41714213-41714232 | Msa0548000:intron | 20.0% |
| !! | AGAATTTGATGAATGAATTT+GGG | + | chr4_1:41714506-41714525 | None:intergenic | 20.0% |
| ! | AGAAGAATAGAATAATTCCA+AGG | - | chr4_1:41713563-41713582 | Msa0548000:CDS | 25.0% |
| ! | AAAAGGATTGGGTTAATATT+AGG | + | chr4_1:41713670-41713689 | None:intergenic | 25.0% |
| !! | ATTGATGATAAAACTCCTAT+AGG | + | chr4_1:41713881-41713900 | None:intergenic | 25.0% |
| ! | ATGCTAGTAATTTAGTAAAG+AGG | - | chr4_1:41713963-41713982 | Msa0548000:intron | 25.0% |
| !!! | TTATTTTATTTTGTGGTGAC+CGG | - | chr4_1:41714084-41714103 | Msa0548000:intron | 25.0% |
| ! | TGCATAATATATGTAAGGTT+CGG | + | chr4_1:41714120-41714139 | None:intergenic | 25.0% |
| ! | GACAATGCATAATATATGTA+AGG | + | chr4_1:41714125-41714144 | None:intergenic | 25.0% |
| ! | GAGTAAACAGGAAATAAAAA+AGG | - | chr4_1:41714212-41714231 | Msa0548000:intron | 25.0% |
| ! | GATTTGAAAAAACAATGATG+CGG | + | chr4_1:41714343-41714362 | None:intergenic | 25.0% |
| ! | GAGAATTTGATGAATGAATT+TGG | + | chr4_1:41714507-41714526 | None:intergenic | 25.0% |
| ! | AGAAGAATAGAATTATTCCA+AGG | - | chr4_1:41714842-41714861 | Msa0548000:CDS | 25.0% |
| ! | AGAAGAATAGAATAATTCCA+AGG | - | chr4_1:41713563-41713582 | Msa0548000:CDS | 25.0% |
| ! | AAAAGGATTGGGTTAATATT+AGG | + | chr4_1:41713670-41713689 | None:intergenic | 25.0% |
| !! | ATTGATGATAAAACTCCTAT+AGG | + | chr4_1:41713881-41713900 | None:intergenic | 25.0% |
| ! | ATGCTAGTAATTTAGTAAAG+AGG | - | chr4_1:41713963-41713982 | Msa0548000:intron | 25.0% |
| !!! | TTATTTTATTTTGTGGTGAC+CGG | - | chr4_1:41714084-41714103 | Msa0548000:intron | 25.0% |
| ! | TGCATAATATATGTAAGGTT+CGG | + | chr4_1:41714120-41714139 | None:intergenic | 25.0% |
| ! | GACAATGCATAATATATGTA+AGG | + | chr4_1:41714125-41714144 | None:intergenic | 25.0% |
| ! | GAGTAAACAGGAAATAAAAA+AGG | - | chr4_1:41714212-41714231 | Msa0548000:intron | 25.0% |
| ! | GATTTGAAAAAACAATGATG+CGG | + | chr4_1:41714343-41714362 | None:intergenic | 25.0% |
| ! | GAGAATTTGATGAATGAATT+TGG | + | chr4_1:41714507-41714526 | None:intergenic | 25.0% |
| ! | AGAAGAATAGAATTATTCCA+AGG | - | chr4_1:41714842-41714861 | Msa0548000:CDS | 25.0% |
| TTTCATTCTTCTTAGGCAAA+AGG | + | chr4_1:41713687-41713706 | None:intergenic | 30.0% | |
| TATAGGAGAATTGCATAACA+TGG | + | chr4_1:41713864-41713883 | None:intergenic | 30.0% | |
| ATGTTATGCAATTCTCCTAT+AGG | - | chr4_1:41713863-41713882 | Msa0548000:intron | 30.0% | |
| !!! | TATTTTATTTTGTGGTGACC+GGG | - | chr4_1:41714085-41714104 | Msa0548000:intron | 30.0% |
| CATAATATATGTAAGGTTCG+GGG | + | chr4_1:41714118-41714137 | None:intergenic | 30.0% | |
| GCATAATATATGTAAGGTTC+GGG | + | chr4_1:41714119-41714138 | None:intergenic | 30.0% | |
| !! | TGACGTGGAATTGTTTTATT+CGG | + | chr4_1:41714255-41714274 | None:intergenic | 30.0% |
| TCCCTATGTCATGTAATTAA+CGG | - | chr4_1:41714388-41714407 | Msa0548000:intron | 30.0% | |
| TCCGTTAATTACATGACATA+GGG | + | chr4_1:41714392-41714411 | None:intergenic | 30.0% | |
| ATCCGTTAATTACATGACAT+AGG | + | chr4_1:41714393-41714412 | None:intergenic | 30.0% | |
| TTTCATTCTTCTTAGGCAAA+AGG | + | chr4_1:41713687-41713706 | None:intergenic | 30.0% | |
| TATAGGAGAATTGCATAACA+TGG | + | chr4_1:41713864-41713883 | None:intergenic | 30.0% | |
| ATGTTATGCAATTCTCCTAT+AGG | - | chr4_1:41713863-41713882 | Msa0548000:intron | 30.0% | |
| !!! | TATTTTATTTTGTGGTGACC+GGG | - | chr4_1:41714085-41714104 | Msa0548000:intron | 30.0% |
| CATAATATATGTAAGGTTCG+GGG | + | chr4_1:41714118-41714137 | None:intergenic | 30.0% | |
| GCATAATATATGTAAGGTTC+GGG | + | chr4_1:41714119-41714138 | None:intergenic | 30.0% | |
| !! | TGACGTGGAATTGTTTTATT+CGG | + | chr4_1:41714255-41714274 | None:intergenic | 30.0% |
| TCCCTATGTCATGTAATTAA+CGG | - | chr4_1:41714388-41714407 | Msa0548000:intron | 30.0% | |
| TCCGTTAATTACATGACATA+GGG | + | chr4_1:41714392-41714411 | None:intergenic | 30.0% | |
| ATCCGTTAATTACATGACAT+AGG | + | chr4_1:41714393-41714412 | None:intergenic | 30.0% | |
| AAGCACTAAGACAACAAAGA+AGG | - | chr4_1:41713321-41713340 | Msa0548000:CDS | 35.0% | |
| AGCACTAAGACAACAAAGAA+GGG | - | chr4_1:41713322-41713341 | Msa0548000:CDS | 35.0% | |
| CAATTTCCAGTTGGAAGAAT+CGG | - | chr4_1:41713412-41713431 | Msa0548000:CDS | 35.0% | |
| TCTTCTTAGGCAAAAGGATT+GGG | + | chr4_1:41713681-41713700 | None:intergenic | 35.0% | |
| TTCTTCTTAGGCAAAAGGAT+TGG | + | chr4_1:41713682-41713701 | None:intergenic | 35.0% | |
| !!! | GCAGCTTTTTCATTCTTCTT+AGG | + | chr4_1:41713694-41713713 | None:intergenic | 35.0% |
| AAACAGATCTAAGCCTTCTT+TGG | + | chr4_1:41713754-41713773 | None:intergenic | 35.0% | |
| TCTTACCAACAATTGAGCTA+AGG | - | chr4_1:41714146-41714165 | Msa0548000:intron | 35.0% | |
| AATGTCCTTAGCTCAATTGT+TGG | + | chr4_1:41714154-41714173 | None:intergenic | 35.0% | |
| GGTGGGATTAATATATGAGA+CGG | + | chr4_1:41714476-41714495 | None:intergenic | 35.0% | |
| AGAGAATTTGAATGCGAAGA+AGG | + | chr4_1:41714538-41714557 | None:intergenic | 35.0% | |
| CAATTTCCAGTTGGAAGAAT+CGG | - | chr4_1:41713412-41713431 | Msa0548000:CDS | 35.0% | |
| AAGAGGATTGGGTTAATGTT+TGG | + | chr4_1:41714949-41714968 | None:intergenic | 35.0% | |
| AAGCACTAAGACAACAAAGA+AGG | - | chr4_1:41713321-41713340 | Msa0548000:CDS | 35.0% | |
| AGCACTAAGACAACAAAGAA+GGG | - | chr4_1:41713322-41713341 | Msa0548000:CDS | 35.0% | |
| CAATTTCCAGTTGGAAGAAT+CGG | - | chr4_1:41713412-41713431 | Msa0548000:CDS | 35.0% | |
| TCTTCTTAGGCAAAAGGATT+GGG | + | chr4_1:41713681-41713700 | None:intergenic | 35.0% | |
| TTCTTCTTAGGCAAAAGGAT+TGG | + | chr4_1:41713682-41713701 | None:intergenic | 35.0% | |
| !!! | GCAGCTTTTTCATTCTTCTT+AGG | + | chr4_1:41713694-41713713 | None:intergenic | 35.0% |
| AAACAGATCTAAGCCTTCTT+TGG | + | chr4_1:41713754-41713773 | None:intergenic | 35.0% | |
| TCTTACCAACAATTGAGCTA+AGG | - | chr4_1:41714146-41714165 | Msa0548000:intron | 35.0% | |
| AATGTCCTTAGCTCAATTGT+TGG | + | chr4_1:41714154-41714173 | None:intergenic | 35.0% | |
| GGTGGGATTAATATATGAGA+CGG | + | chr4_1:41714476-41714495 | None:intergenic | 35.0% | |
| AGAGAATTTGAATGCGAAGA+AGG | + | chr4_1:41714538-41714557 | None:intergenic | 35.0% | |
| CAATTTCCAGTTGGAAGAAT+CGG | - | chr4_1:41713412-41713431 | Msa0548000:CDS | 35.0% | |
| AAGAGGATTGGGTTAATGTT+TGG | + | chr4_1:41714949-41714968 | None:intergenic | 35.0% | |
| TCCAACTGGAAATTGAAGAC+CGG | + | chr4_1:41713407-41713426 | None:intergenic | 40.0% | |
| ATCGGTCGATACTTGAAGAA+AGG | - | chr4_1:41713430-41713449 | Msa0548000:CDS | 40.0% | |
| GATATTCAAGAACTGCTGCT+AGG | + | chr4_1:41713495-41713514 | None:intergenic | 40.0% | |
| AATTCCAAGGCATGTGTTGT+TGG | - | chr4_1:41713576-41713595 | Msa0548000:CDS | 40.0% | |
| GAGCTTGGTAAATTACTTGC+TGG | - | chr4_1:41713616-41713635 | Msa0548000:CDS | 40.0% | |
| !! | TTCTTTGGCTCTTTGTTAGC+TGG | + | chr4_1:41713718-41713737 | None:intergenic | 40.0% |
| AGCTAACAAAGAGCCAAAGA+AGG | - | chr4_1:41713717-41713736 | Msa0548000:CDS | 40.0% | |
| TAATTAGGTTCCTTGCGGAT+CGG | + | chr4_1:41714278-41714297 | None:intergenic | 40.0% | |
| ! | CACGTTTCTACTGGCTAATT+AGG | + | chr4_1:41714293-41714312 | None:intergenic | 40.0% |
| ATGACATAGGGATGTGAAGA+TGG | + | chr4_1:41714380-41714399 | None:intergenic | 40.0% | |
| ! | TGAATGAATTTGGGACGATG+CGG | + | chr4_1:41714497-41714516 | None:intergenic | 40.0% |
| CTCAGAATCTCAGTTCGAAA+TGG | - | chr4_1:41714573-41714592 | Msa0548000:intron | 40.0% | |
| TCCAACTGGAAATTGAAGAC+CGG | + | chr4_1:41713407-41713426 | None:intergenic | 40.0% | |
| ATCGGTCGATACTTGAAGAA+AGG | - | chr4_1:41713430-41713449 | Msa0548000:CDS | 40.0% | |
| TATTCCAAGGCATGTGTTGT+TGG | - | chr4_1:41714855-41714874 | Msa0548000:CDS | 40.0% | |
| GAGCTTGGTAAATTACTTGC+TGG | - | chr4_1:41713616-41713635 | Msa0548000:CDS | 40.0% | |
| TCTTCTTAGGCAAGAGGATT+GGG | + | chr4_1:41714960-41714979 | None:intergenic | 40.0% | |
| TTTCAGTCTTCTTAGGCAAG+AGG | + | chr4_1:41714966-41714985 | None:intergenic | 40.0% | |
| !!! | GCAGCTTTTTCAGTCTTCTT+AGG | + | chr4_1:41714973-41714992 | None:intergenic | 40.0% |
| !! | TTCTTTGGCTCTTTGTTAGC+AGG | + | chr4_1:41713718-41713737 | None:intergenic | 40.0% |
| TGCTAACAAAGAGCCAAAGA+AGG | - | chr4_1:41714996-41715015 | Msa0548000:CDS | 40.0% | |
| TCCAACTGGAAATTGAAGAC+CGG | + | chr4_1:41713407-41713426 | None:intergenic | 40.0% | |
| ATCGGTCGATACTTGAAGAA+AGG | - | chr4_1:41713430-41713449 | Msa0548000:CDS | 40.0% | |
| GATATTCAAGAACTGCTGCT+AGG | + | chr4_1:41713495-41713514 | None:intergenic | 40.0% | |
| AATTCCAAGGCATGTGTTGT+TGG | - | chr4_1:41713576-41713595 | Msa0548000:CDS | 40.0% | |
| GAGCTTGGTAAATTACTTGC+TGG | - | chr4_1:41713616-41713635 | Msa0548000:CDS | 40.0% | |
| !! | TTCTTTGGCTCTTTGTTAGC+TGG | + | chr4_1:41713718-41713737 | None:intergenic | 40.0% |
| AGCTAACAAAGAGCCAAAGA+AGG | - | chr4_1:41713717-41713736 | Msa0548000:CDS | 40.0% | |
| TAATTAGGTTCCTTGCGGAT+CGG | + | chr4_1:41714278-41714297 | None:intergenic | 40.0% | |
| ! | CACGTTTCTACTGGCTAATT+AGG | + | chr4_1:41714293-41714312 | None:intergenic | 40.0% |
| ATGACATAGGGATGTGAAGA+TGG | + | chr4_1:41714380-41714399 | None:intergenic | 40.0% | |
| ! | TGAATGAATTTGGGACGATG+CGG | + | chr4_1:41714497-41714516 | None:intergenic | 40.0% |
| CTCAGAATCTCAGTTCGAAA+TGG | - | chr4_1:41714573-41714592 | Msa0548000:intron | 40.0% | |
| TCCAACTGGAAATTGAAGAC+CGG | + | chr4_1:41713407-41713426 | None:intergenic | 40.0% | |
| ATCGGTCGATACTTGAAGAA+AGG | - | chr4_1:41713430-41713449 | Msa0548000:CDS | 40.0% | |
| TATTCCAAGGCATGTGTTGT+TGG | - | chr4_1:41714855-41714874 | Msa0548000:CDS | 40.0% | |
| GAGCTTGGTAAATTACTTGC+TGG | - | chr4_1:41713616-41713635 | Msa0548000:CDS | 40.0% | |
| TCTTCTTAGGCAAGAGGATT+GGG | + | chr4_1:41714960-41714979 | None:intergenic | 40.0% | |
| TTTCAGTCTTCTTAGGCAAG+AGG | + | chr4_1:41714966-41714985 | None:intergenic | 40.0% | |
| !!! | GCAGCTTTTTCAGTCTTCTT+AGG | + | chr4_1:41714973-41714992 | None:intergenic | 40.0% |
| !! | TTCTTTGGCTCTTTGTTAGC+AGG | + | chr4_1:41713718-41713737 | None:intergenic | 40.0% |
| TGCTAACAAAGAGCCAAAGA+AGG | - | chr4_1:41714996-41715015 | Msa0548000:CDS | 40.0% | |
| AAGACAACAAAGAAGGGAGC+CGG | - | chr4_1:41713328-41713347 | Msa0548000:CDS | 45.0% | |
| GTGACAAGATCAATCAGAGC+CGG | - | chr4_1:41713385-41713404 | Msa0548000:CDS | 45.0% | |
| ! | TATCGACCGATTCTTCCAAC+TGG | + | chr4_1:41713421-41713440 | None:intergenic | 45.0% |
| AGAACTGCTGCTAGGTATAC+TGG | + | chr4_1:41713487-41713506 | None:intergenic | 45.0% | |
| TGCTGCTGAAGTTCTTGAGT+TGG | - | chr4_1:41713516-41713535 | Msa0548000:CDS | 45.0% | |
| GTTAGGAACGATGAAGAGCT+TGG | - | chr4_1:41713601-41713620 | Msa0548000:CDS | 45.0% | |
| AACAAAGAGCCAAAGAAGGC+TGG | - | chr4_1:41713721-41713740 | Msa0548000:CDS | 45.0% | |
| ! | GGAGATTTTCCAGCCTTCTT+TGG | + | chr4_1:41713733-41713752 | None:intergenic | 45.0% |
| GGCTGGAAAATCTCCAAAGA+AGG | - | chr4_1:41713738-41713757 | Msa0548000:CDS | 45.0% | |
| CTGGCTAATTAGGTTCCTTG+CGG | + | chr4_1:41714283-41714302 | None:intergenic | 45.0% | |
| TGAGGTTCTCACGTTTCTAC+TGG | + | chr4_1:41714302-41714321 | None:intergenic | 45.0% | |
| ATAGGGATGTGAAGATGGAC+GGG | + | chr4_1:41714375-41714394 | None:intergenic | 45.0% | |
| CATAGGGATGTGAAGATGGA+CGG | + | chr4_1:41714376-41714395 | None:intergenic | 45.0% | |
| GTTCTCACGTTTCTATTGGC+TGG | + | chr4_1:41714454-41714473 | None:intergenic | 45.0% | |
| GACGGTTCTCACGTTTCTAT+TGG | + | chr4_1:41714458-41714477 | None:intergenic | 45.0% | |
| GTGACAAGATCAATCAGAGC+CGG | - | chr4_1:41713385-41713404 | Msa0548000:CDS | 45.0% | |
| ! | TATCGACCGATTCTTCCAAC+TGG | + | chr4_1:41713421-41713440 | None:intergenic | 45.0% |
| AGAACTGCTGCTAGGTATAC+TGG | + | chr4_1:41713487-41713506 | None:intergenic | 45.0% | |
| GGTATTCAAGAACTGCTGCT+AGG | + | chr4_1:41714774-41714793 | None:intergenic | 45.0% | |
| ACTCAAGAACTTCAGCAGCA+AGG | + | chr4_1:41713516-41713535 | None:intergenic | 45.0% | |
| TGCTGCTGAAGTTCTTGAGT+TGG | - | chr4_1:41713516-41713535 | Msa0548000:CDS | 45.0% | |
| GTTAGGAACGATGAAGAGCT+TGG | - | chr4_1:41713601-41713620 | Msa0548000:CDS | 45.0% | |
| GTCTTCTTAGGCAAGAGGAT+TGG | + | chr4_1:41714961-41714980 | None:intergenic | 45.0% | |
| AACAAAGAGCCAAAGAAGGC+TGG | - | chr4_1:41713721-41713740 | Msa0548000:CDS | 45.0% | |
| AAGACAACAAAGAAGGGAGC+CGG | - | chr4_1:41713328-41713347 | Msa0548000:CDS | 45.0% | |
| GTGACAAGATCAATCAGAGC+CGG | - | chr4_1:41713385-41713404 | Msa0548000:CDS | 45.0% | |
| ! | TATCGACCGATTCTTCCAAC+TGG | + | chr4_1:41713421-41713440 | None:intergenic | 45.0% |
| AGAACTGCTGCTAGGTATAC+TGG | + | chr4_1:41713487-41713506 | None:intergenic | 45.0% | |
| TGCTGCTGAAGTTCTTGAGT+TGG | - | chr4_1:41713516-41713535 | Msa0548000:CDS | 45.0% | |
| GTTAGGAACGATGAAGAGCT+TGG | - | chr4_1:41713601-41713620 | Msa0548000:CDS | 45.0% | |
| AACAAAGAGCCAAAGAAGGC+TGG | - | chr4_1:41713721-41713740 | Msa0548000:CDS | 45.0% | |
| ! | GGAGATTTTCCAGCCTTCTT+TGG | + | chr4_1:41713733-41713752 | None:intergenic | 45.0% |
| GGCTGGAAAATCTCCAAAGA+AGG | - | chr4_1:41713738-41713757 | Msa0548000:CDS | 45.0% | |
| CTGGCTAATTAGGTTCCTTG+CGG | + | chr4_1:41714283-41714302 | None:intergenic | 45.0% | |
| TGAGGTTCTCACGTTTCTAC+TGG | + | chr4_1:41714302-41714321 | None:intergenic | 45.0% | |
| ATAGGGATGTGAAGATGGAC+GGG | + | chr4_1:41714375-41714394 | None:intergenic | 45.0% | |
| CATAGGGATGTGAAGATGGA+CGG | + | chr4_1:41714376-41714395 | None:intergenic | 45.0% | |
| GTTCTCACGTTTCTATTGGC+TGG | + | chr4_1:41714454-41714473 | None:intergenic | 45.0% | |
| GACGGTTCTCACGTTTCTAT+TGG | + | chr4_1:41714458-41714477 | None:intergenic | 45.0% | |
| GTGACAAGATCAATCAGAGC+CGG | - | chr4_1:41713385-41713404 | Msa0548000:CDS | 45.0% | |
| ! | TATCGACCGATTCTTCCAAC+TGG | + | chr4_1:41713421-41713440 | None:intergenic | 45.0% |
| AGAACTGCTGCTAGGTATAC+TGG | + | chr4_1:41713487-41713506 | None:intergenic | 45.0% | |
| GGTATTCAAGAACTGCTGCT+AGG | + | chr4_1:41714774-41714793 | None:intergenic | 45.0% | |
| ACTCAAGAACTTCAGCAGCA+AGG | + | chr4_1:41713516-41713535 | None:intergenic | 45.0% | |
| TGCTGCTGAAGTTCTTGAGT+TGG | - | chr4_1:41713516-41713535 | Msa0548000:CDS | 45.0% | |
| GTTAGGAACGATGAAGAGCT+TGG | - | chr4_1:41713601-41713620 | Msa0548000:CDS | 45.0% | |
| GTCTTCTTAGGCAAGAGGAT+TGG | + | chr4_1:41714961-41714980 | None:intergenic | 45.0% | |
| AACAAAGAGCCAAAGAAGGC+TGG | - | chr4_1:41713721-41713740 | Msa0548000:CDS | 45.0% | |
| AGGAGGACCAAGGAAGAAGT+CGG | - | chr4_1:41713363-41713382 | Msa0548000:CDS | 50.0% | |
| !! | CTTGTCACCGACTTCTTCCT+TGG | + | chr4_1:41713373-41713392 | None:intergenic | 50.0% |
| GCCGGTCTTCAATTTCCAGT+TGG | - | chr4_1:41713403-41713422 | Msa0548000:CDS | 50.0% | |
| !! | GCTGAAGTTCTTGAGTTGGC+TGG | - | chr4_1:41713520-41713539 | Msa0548000:CDS | 50.0% |
| ACAGCCAACAACACATGCCT+TGG | + | chr4_1:41713583-41713602 | None:intergenic | 50.0% | |
| ! | GGCATGTGTTGTTGGCTGTT+AGG | - | chr4_1:41713584-41713603 | Msa0548000:CDS | 50.0% |
| !! | GCTGGTGTCACAATTGCTCA+TGG | - | chr4_1:41713634-41713653 | Msa0548000:CDS | 50.0% |
| ! | GGTGTCACAATTGCTCATGG+TGG | - | chr4_1:41713637-41713656 | Msa0548000:CDS | 50.0% |
| AAGGTTCGGGGTTTGAATCC+CGG | + | chr4_1:41714106-41714125 | None:intergenic | 50.0% | |
| ATCGATGAGCTGGACTTGTG+AGG | + | chr4_1:41714320-41714339 | None:intergenic | 50.0% | |
| AATGATGCGGATCGATGAGC+TGG | + | chr4_1:41714330-41714349 | None:intergenic | 50.0% | |
| TAGGGATGTGAAGATGGACG+GGG | + | chr4_1:41714374-41714393 | None:intergenic | 50.0% | |
| ! | CACGTTTCTATTGGCTGGTG+AGG | + | chr4_1:41714449-41714468 | None:intergenic | 50.0% |
| ! | TGAATTTGGGACGATGCGGT+GGG | + | chr4_1:41714493-41714512 | None:intergenic | 50.0% |
| ! | ATGAATTTGGGACGATGCGG+TGG | + | chr4_1:41714494-41714513 | None:intergenic | 50.0% |
| AGGAGGACCAAGGAAGAAGT+CGG | - | chr4_1:41713363-41713382 | Msa0548000:CDS | 50.0% | |
| !! | CTTGTCACCGACTTCTTCCT+TGG | + | chr4_1:41713373-41713392 | None:intergenic | 50.0% |
| GCCGGTCTTCAATTTCCAGT+TGG | - | chr4_1:41713403-41713422 | Msa0548000:CDS | 50.0% | |
| !! | GCTGAAGTTCTTGAGTTGGC+TGG | - | chr4_1:41713520-41713539 | Msa0548000:CDS | 50.0% |
| ACAGCCAACAACACATGCCT+TGG | + | chr4_1:41713583-41713602 | None:intergenic | 50.0% | |
| ! | GGCATGTGTTGTTGGCTGTT+AGG | - | chr4_1:41713584-41713603 | Msa0548000:CDS | 50.0% |
| !! | GCTGGTGTCACAATTGCTCA+TGG | - | chr4_1:41713634-41713653 | Msa0548000:CDS | 50.0% |
| ! | GGTGTCACAATTGCTCATGG+TGG | - | chr4_1:41713637-41713656 | Msa0548000:CDS | 50.0% |
| GGAGACTTTCCAGCCTTCTT+TGG | + | chr4_1:41715012-41715031 | None:intergenic | 50.0% | |
| GGCTGGAAAGTCTCCAAAGA+AGG | - | chr4_1:41715017-41715036 | Msa0548000:CDS | 50.0% | |
| AGGAGGACCAAGGAAGAAGT+CGG | - | chr4_1:41713363-41713382 | Msa0548000:CDS | 50.0% | |
| !! | CTTGTCACCGACTTCTTCCT+TGG | + | chr4_1:41713373-41713392 | None:intergenic | 50.0% |
| GCCGGTCTTCAATTTCCAGT+TGG | - | chr4_1:41713403-41713422 | Msa0548000:CDS | 50.0% | |
| !! | GCTGAAGTTCTTGAGTTGGC+TGG | - | chr4_1:41713520-41713539 | Msa0548000:CDS | 50.0% |
| ACAGCCAACAACACATGCCT+TGG | + | chr4_1:41713583-41713602 | None:intergenic | 50.0% | |
| ! | GGCATGTGTTGTTGGCTGTT+AGG | - | chr4_1:41713584-41713603 | Msa0548000:CDS | 50.0% |
| !! | GCTGGTGTCACAATTGCTCA+TGG | - | chr4_1:41713634-41713653 | Msa0548000:CDS | 50.0% |
| ! | GGTGTCACAATTGCTCATGG+TGG | - | chr4_1:41713637-41713656 | Msa0548000:CDS | 50.0% |
| AAGGTTCGGGGTTTGAATCC+CGG | + | chr4_1:41714106-41714125 | None:intergenic | 50.0% | |
| ATCGATGAGCTGGACTTGTG+AGG | + | chr4_1:41714320-41714339 | None:intergenic | 50.0% | |
| AATGATGCGGATCGATGAGC+TGG | + | chr4_1:41714330-41714349 | None:intergenic | 50.0% | |
| TAGGGATGTGAAGATGGACG+GGG | + | chr4_1:41714374-41714393 | None:intergenic | 50.0% | |
| ! | CACGTTTCTATTGGCTGGTG+AGG | + | chr4_1:41714449-41714468 | None:intergenic | 50.0% |
| ! | TGAATTTGGGACGATGCGGT+GGG | + | chr4_1:41714493-41714512 | None:intergenic | 50.0% |
| ! | ATGAATTTGGGACGATGCGG+TGG | + | chr4_1:41714494-41714513 | None:intergenic | 50.0% |
| AGGAGGACCAAGGAAGAAGT+CGG | - | chr4_1:41713363-41713382 | Msa0548000:CDS | 50.0% | |
| !! | CTTGTCACCGACTTCTTCCT+TGG | + | chr4_1:41713373-41713392 | None:intergenic | 50.0% |
| GCCGGTCTTCAATTTCCAGT+TGG | - | chr4_1:41713403-41713422 | Msa0548000:CDS | 50.0% | |
| !! | GCTGAAGTTCTTGAGTTGGC+TGG | - | chr4_1:41713520-41713539 | Msa0548000:CDS | 50.0% |
| ACAGCCAACAACACATGCCT+TGG | + | chr4_1:41713583-41713602 | None:intergenic | 50.0% | |
| ! | GGCATGTGTTGTTGGCTGTT+AGG | - | chr4_1:41713584-41713603 | Msa0548000:CDS | 50.0% |
| !! | GCTGGTGTCACAATTGCTCA+TGG | - | chr4_1:41713634-41713653 | Msa0548000:CDS | 50.0% |
| ! | GGTGTCACAATTGCTCATGG+TGG | - | chr4_1:41713637-41713656 | Msa0548000:CDS | 50.0% |
| GGAGACTTTCCAGCCTTCTT+TGG | + | chr4_1:41715012-41715031 | None:intergenic | 50.0% | |
| GGCTGGAAAGTCTCCAAAGA+AGG | - | chr4_1:41715017-41715036 | Msa0548000:CDS | 50.0% | |
| ACAACAAAGAAGGGAGCCGG+TGG | - | chr4_1:41713331-41713350 | Msa0548000:CDS | 55.0% | |
| TCCTCCTCCTTTCCTTCCAC+CGG | + | chr4_1:41713350-41713369 | None:intergenic | 55.0% | |
| GAAGGAAAGGAGGAGGACCA+AGG | - | chr4_1:41713353-41713372 | Msa0548000:CDS | 55.0% | |
| GGAAGATACGCTCAGCGTGT+TGG | - | chr4_1:41713451-41713470 | Msa0548000:CDS | 55.0% | |
| TACGCTCAGCGTGTTGGAAC+AGG | - | chr4_1:41713457-41713476 | Msa0548000:CDS | 55.0% | |
| TTCGTTGCGGATCGATGACG+TGG | + | chr4_1:41714426-41714445 | None:intergenic | 55.0% | |
| TTGGCTGGTGAGGTTCGTTG+CGG | + | chr4_1:41714439-41714458 | None:intergenic | 55.0% | |
| AGCACCAAGACCGCGAAGAA+AGG | - | chr4_1:41714601-41714620 | Msa0548000:intron | 55.0% | |
| AAGACCGCGAAGAAAGGAGC+CGG | - | chr4_1:41714607-41714626 | Msa0548000:intron | 55.0% | |
| AAAGGAGCCGGTGGAAGGAA+AGG | - | chr4_1:41714619-41714638 | Msa0548000:intron | 55.0% | |
| TCCTCCTCCTTTCCTTCCAC+CGG | + | chr4_1:41713350-41713369 | None:intergenic | 55.0% | |
| GAAGGAAAGGAGGAGGACCA+AGG | - | chr4_1:41713353-41713372 | Msa0548000:CDS | 55.0% | |
| GGAAGATACGCTCAGCGTGT+TGG | - | chr4_1:41713451-41713470 | Msa0548000:CDS | 55.0% | |
| TACGCTCAGCGTGTTGGAAC+AGG | - | chr4_1:41713457-41713476 | Msa0548000:CDS | 55.0% | |
| ACAACAAAGAAGGGAGCCGG+TGG | - | chr4_1:41713331-41713350 | Msa0548000:CDS | 55.0% | |
| TCCTCCTCCTTTCCTTCCAC+CGG | + | chr4_1:41713350-41713369 | None:intergenic | 55.0% | |
| GAAGGAAAGGAGGAGGACCA+AGG | - | chr4_1:41713353-41713372 | Msa0548000:CDS | 55.0% | |
| GGAAGATACGCTCAGCGTGT+TGG | - | chr4_1:41713451-41713470 | Msa0548000:CDS | 55.0% | |
| TACGCTCAGCGTGTTGGAAC+AGG | - | chr4_1:41713457-41713476 | Msa0548000:CDS | 55.0% | |
| TTCGTTGCGGATCGATGACG+TGG | + | chr4_1:41714426-41714445 | None:intergenic | 55.0% | |
| TTGGCTGGTGAGGTTCGTTG+CGG | + | chr4_1:41714439-41714458 | None:intergenic | 55.0% | |
| AGCACCAAGACCGCGAAGAA+AGG | - | chr4_1:41714601-41714620 | Msa0548000:intron | 55.0% | |
| AAGACCGCGAAGAAAGGAGC+CGG | - | chr4_1:41714607-41714626 | Msa0548000:intron | 55.0% | |
| AAAGGAGCCGGTGGAAGGAA+AGG | - | chr4_1:41714619-41714638 | Msa0548000:intron | 55.0% | |
| TCCTCCTCCTTTCCTTCCAC+CGG | + | chr4_1:41713350-41713369 | None:intergenic | 55.0% | |
| GAAGGAAAGGAGGAGGACCA+AGG | - | chr4_1:41713353-41713372 | Msa0548000:CDS | 55.0% | |
| GGAAGATACGCTCAGCGTGT+TGG | - | chr4_1:41713451-41713470 | Msa0548000:CDS | 55.0% | |
| TACGCTCAGCGTGTTGGAAC+AGG | - | chr4_1:41713457-41713476 | Msa0548000:CDS | 55.0% | |
| CAAAGAAGGGAGCCGGTGGA+AGG | - | chr4_1:41713335-41713354 | Msa0548000:CDS | 60.0% | |
| AAGGGAGCCGGTGGAAGGAA+AGG | - | chr4_1:41713340-41713359 | Msa0548000:CDS | 60.0% | |
| TTCCACGTCACCGATCCGCA+AGG | - | chr4_1:41714265-41714284 | Msa0548000:intron | 60.0% | |
| TTCCTTGCGGATCGGTGACG+TGG | + | chr4_1:41714270-41714289 | None:intergenic | 60.0% | |
| GGATGTGAAGATGGACGGGG+AGG | + | chr4_1:41714371-41714390 | None:intergenic | 60.0% | |
| GGCTCCTTTCTTCGCGGTCT+TGG | + | chr4_1:41714608-41714627 | None:intergenic | 60.0% | |
| !! | TCCACCGGCTCCTTTCTTCG+CGG | + | chr4_1:41714614-41714633 | None:intergenic | 60.0% |
| CGAAGAAAGGAGCCGGTGGA+AGG | - | chr4_1:41714614-41714633 | Msa0548000:intron | 60.0% | |
| CAAAGAAGGGAGCCGGTGGA+AGG | - | chr4_1:41713335-41713354 | Msa0548000:CDS | 60.0% | |
| AAGGGAGCCGGTGGAAGGAA+AGG | - | chr4_1:41713340-41713359 | Msa0548000:CDS | 60.0% | |
| TTCCACGTCACCGATCCGCA+AGG | - | chr4_1:41714265-41714284 | Msa0548000:intron | 60.0% | |
| TTCCTTGCGGATCGGTGACG+TGG | + | chr4_1:41714270-41714289 | None:intergenic | 60.0% | |
| GGATGTGAAGATGGACGGGG+AGG | + | chr4_1:41714371-41714390 | None:intergenic | 60.0% | |
| GGCTCCTTTCTTCGCGGTCT+TGG | + | chr4_1:41714608-41714627 | None:intergenic | 60.0% | |
| !! | TCCACCGGCTCCTTTCTTCG+CGG | + | chr4_1:41714614-41714633 | None:intergenic | 60.0% |
| CGAAGAAAGGAGCCGGTGGA+AGG | - | chr4_1:41714614-41714633 | Msa0548000:intron | 60.0% | |
| GGAGCCGGTGGAAGGAAAGG+AGG | - | chr4_1:41713343-41713362 | Msa0548000:CDS | 65.0% | |
| GCCGGTGGAAGGAAAGGAGG+AGG | - | chr4_1:41713346-41713365 | Msa0548000:CDS | 65.0% | |
| ACCGCGAAGAAAGGAGCCGG+TGG | - | chr4_1:41714610-41714629 | Msa0548000:intron | 65.0% | |
| GGAGCCGGTGGAAGGAAAGG+AGG | - | chr4_1:41713343-41713362 | Msa0548000:CDS | 65.0% | |
| GCCGGTGGAAGGAAAGGAGG+AGG | - | chr4_1:41713346-41713365 | Msa0548000:CDS | 65.0% | |
| GGAGCCGGTGGAAGGAAAGG+AGG | - | chr4_1:41713343-41713362 | Msa0548000:CDS | 65.0% | |
| GCCGGTGGAAGGAAAGGAGG+AGG | - | chr4_1:41713346-41713365 | Msa0548000:CDS | 65.0% | |
| ACCGCGAAGAAAGGAGCCGG+TGG | - | chr4_1:41714610-41714629 | Msa0548000:intron | 65.0% | |
| GGAGCCGGTGGAAGGAAAGG+AGG | - | chr4_1:41713343-41713362 | Msa0548000:CDS | 65.0% | |
| GCCGGTGGAAGGAAAGGAGG+AGG | - | chr4_1:41713346-41713365 | Msa0548000:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 41713313 | 41715044 | 41713313 | ID=Msa0548000;Name=Msa0548000 |
| chr4_1 | mRNA | 41713313 | 41715044 | 41713313 | ID=Msa0548000-mRNA-1;Parent=Msa0548000;Name=Msa0548000-mRNA-1;_AED=0.14;_eAED=0.16;_QI=0|0|0|1|0|0|3|0|266 |
| chr4_1 | exon | 41714891 | 41715044 | 41714891 | ID=Msa0548000-mRNA-1:exon:10736;Parent=Msa0548000-mRNA-1 |
| chr4_1 | exon | 41714699 | 41714878 | 41714699 | ID=Msa0548000-mRNA-1:exon:10735;Parent=Msa0548000-mRNA-1 |
| chr4_1 | exon | 41713313 | 41713779 | 41713313 | ID=Msa0548000-mRNA-1:exon:10734;Parent=Msa0548000-mRNA-1 |
| chr4_1 | CDS | 41714891 | 41715044 | 41714891 | ID=Msa0548000-mRNA-1:cds;Parent=Msa0548000-mRNA-1 |
| chr4_1 | CDS | 41714699 | 41714878 | 41714699 | ID=Msa0548000-mRNA-1:cds;Parent=Msa0548000-mRNA-1 |
| chr4_1 | CDS | 41713313 | 41713779 | 41713313 | ID=Msa0548000-mRNA-1:cds;Parent=Msa0548000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
