AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1184090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1184090 MtrunA17_Chr8g0335121 94.336 565 31 1 16 580 1 564 0.0 1093
Msa1184090 MtrunA17_Chr7g0249711 54.561 581 243 7 4 572 5 576 0.0 638
Msa1184090 MtrunA17_Chr5g0438661 25.758 528 371 9 45 568 97 607 5.03e-53 191
Msa1184090 MtrunA17_Chr7g0258521 41.104 163 87 3 20 180 19 174 1.10e-24 107
Msa1184090 MtrunA17_Chr7g0258521 25.926 162 117 3 410 570 302 461 7.80e-14 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1184090 AT3G60400.1 46.691 544 283 3 36 578 17 554 3.43e-178 515
Msa1184090 AT4G19650.2 26.476 525 351 8 54 568 85 584 3.88e-52 188
Msa1184090 AT4G19650.1 25.447 503 340 8 76 568 90 567 1.13e-44 167
Msa1184090 AT5G06810.1 25.285 526 350 13 56 567 78 574 8.51e-40 154
Msa1184090 AT5G06811.1 24.558 566 392 12 16 567 26 570 1.19e-38 150
Msa1184090 AT5G45113.1 22.803 421 295 11 157 568 7 406 2.67e-21 97.1

Find 141 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTGTGTGCTTTGTGAATT+TGG 0.075830 8_1:+19638429 Msa1184090:CDS
TCTCTAGAGTTTCAGGATTT+TGG 0.108976 8_1:-19639409 None:intergenic
TTTGATTGCCTTCTACATTT+AGG 0.135769 8_1:+19639332 Msa1184090:CDS
GCCAATTGGGGTTGGGTTAC+AGG 0.186624 8_1:+19640087 Msa1184090:three_prime_UTR
TGGAACAGAAATGTCGTTTA+AGG 0.220611 8_1:-19637412 None:intergenic
TCATATGTGACAATTATTAA+TGG 0.235205 8_1:-19640355 None:intergenic
GGGACACTCCTTAGAGCTTT+TGG 0.239993 8_1:+19639460 Msa1184090:CDS
TAATTTCCTATGTCAGGATA+TGG 0.244795 8_1:+19639439 Msa1184090:CDS
TCATGAAGCTCGAAATTTAT+TGG 0.254864 8_1:-19639687 None:intergenic
AAACATTTGATTCTTGAGTA+TGG 0.263491 8_1:+19638807 Msa1184090:CDS
TTGATTGCCTTCTACATTTA+GGG 0.265986 8_1:+19639333 Msa1184090:CDS
GAAAAGTGGTTCTGAGATAA+AGG 0.272746 8_1:+19638506 Msa1184090:CDS
TTAAATTTCATGCATACTAT+TGG 0.285045 8_1:+19639236 Msa1184090:CDS
CTTCTTATACATTGCCAATT+GGG 0.298469 8_1:+19640074 Msa1184090:three_prime_UTR
AATTGCTCAAACCAATGTTT+TGG 0.304518 8_1:-19639659 None:intergenic
CTTTGTTTGTTGAAAAGATA+TGG 0.308280 8_1:+19638534 Msa1184090:CDS
CATGAAGCTCGAAATTTATT+GGG 0.313412 8_1:-19639686 None:intergenic
AGCAAATGTGACAATTATTA+TGG 0.317998 8_1:+19640552 Msa1184090:three_prime_UTR
CTGTCACGTTGCAGTGCTAT+AGG 0.319630 8_1:-19640307 None:intergenic
ACCTTTATCATGCTCTTCAT+TGG 0.329479 8_1:-19639153 None:intergenic
CTCTAATCTCATTTCGAAGT+TGG 0.332216 8_1:+19637601 Msa1184090:CDS
TCTAATCTCATTTCGAAGTT+GGG 0.359275 8_1:+19637602 Msa1184090:CDS
TAGCCACTACTTGACAATAT+TGG 0.364261 8_1:-19640199 None:intergenic
TTCATGCATACTATTGGCTT+TGG 0.365567 8_1:+19639242 Msa1184090:CDS
CATGTGATTTAAGATATTCA+TGG 0.366992 8_1:-19639279 None:intergenic
CCCAATGAAGAGCATGATAA+AGG 0.371844 8_1:+19639152 Msa1184090:CDS
ATCTGAACCTCGGCTTAATT+CGG 0.372746 8_1:-19639520 None:intergenic
GCTTCTTATACATTGCCAAT+TGG 0.374632 8_1:+19640073 Msa1184090:three_prime_UTR
TAAGCTTGGTGTGATTTATA+CGG 0.375925 8_1:+19638464 Msa1184090:CDS
GGAGTTGTTGAGTCTCAATT+TGG 0.376264 8_1:+19638917 Msa1184090:CDS
CCCTGTAACCCAACCCCAAT+TGG 0.381911 8_1:-19640088 None:intergenic
ATAGGTTGCTTTCTGATTTG+AGG 0.392968 8_1:+19638646 Msa1184090:CDS
GAGATCTGTGCAAATTGAAT+TGG 0.398389 8_1:-19639747 None:intergenic
TTTATCAAAGAGCAAAGAAT+AGG 0.400002 8_1:-19639777 None:intergenic
CCAATTGGGGTTGGGTTACA+GGG 0.404670 8_1:+19640088 Msa1184090:three_prime_UTR
CCTTTATCATGCTCTTCATT+GGG 0.406357 8_1:-19639152 None:intergenic
AAAGATTAATTTCCTATGTC+AGG 0.406425 8_1:+19639433 Msa1184090:CDS
CCATATGTGGGCTTTAGAAA+AGG 0.410319 8_1:+19639544 Msa1184090:CDS
GGGCTATGGGTTTACGTGAA+TGG 0.411227 8_1:+19639069 Msa1184090:CDS
TTATCGATGATGAGGTTGAT+AGG 0.413270 8_1:+19638628 Msa1184090:CDS
ATGTTTGGTATGATGTTTGT+AGG 0.414620 8_1:+19638718 Msa1184090:CDS
TTGTGAATTTGGATTTCCTT+GGG 0.415023 8_1:+19638440 Msa1184090:CDS
CAAATTGAATTGGAAAATAA+TGG 0.417661 8_1:-19639737 None:intergenic
AAAAGTGTCCAAAAGCTCTA+AGG 0.419374 8_1:-19639468 None:intergenic
CCAGATTATAAGTCAACCTT+TGG 0.419776 8_1:-19639987 None:intergenic
ATTCAATCCCTAAATGTAGA+AGG 0.419800 8_1:-19639340 None:intergenic
AGTGATGGTAAGGGGAAGAT+AGG 0.419950 8_1:+19638765 Msa1184090:CDS
ATCTGATCGGCAAAAGCATA+AGG 0.420610 8_1:-19637554 None:intergenic
TTTGTGAATTTGGATTTCCT+TGG 0.421861 8_1:+19638439 Msa1184090:CDS
CATATGTGGGCTTTAGAAAA+GGG 0.423473 8_1:+19639545 Msa1184090:CDS
ATACATTGCCAATTGGGGTT+GGG 0.425672 8_1:+19640080 Msa1184090:three_prime_UTR
TTCAATTTGCGGTGAAGTGC+AGG 0.426353 8_1:-19637371 None:intergenic
TATACATTGCCAATTGGGGT+TGG 0.426875 8_1:+19640079 Msa1184090:three_prime_UTR
ACCCATAGCCCTCATCAGAT+TGG 0.427036 8_1:-19639057 None:intergenic
CCAAAGGTTGACTTATAATC+TGG 0.430874 8_1:+19639987 Msa1184090:three_prime_UTR
CCCAATCTGATGAGGGCTAT+GGG 0.435992 8_1:+19639056 Msa1184090:CDS
GCAACATCACTTTCAATTTG+CGG 0.436726 8_1:-19637382 None:intergenic
TGTCACGTTGCAGTGCTATA+GGG 0.442941 8_1:-19640306 None:intergenic
TGAGTTCTGTCATGATGTAT+AGG 0.444477 8_1:+19639918 Msa1184090:three_prime_UTR
TTTGTAATGTGCAAATTGTT+GGG 0.448783 8_1:+19638559 Msa1184090:CDS
GATTTGGGAGGGTGTGTTGA+AGG 0.450135 8_1:+19638687 Msa1184090:CDS
AATTTCCTATGTCAGGATAT+GGG 0.450989 8_1:+19639440 Msa1184090:CDS
GGAATGGATTCTAAAGGTCT+TGG 0.453391 8_1:+19638978 Msa1184090:CDS
TCGGTTGATTCTACAAGGTT+CGG 0.454814 8_1:+19638896 Msa1184090:CDS
AAGAACTATGCTCATGCGTT+GGG 0.457899 8_1:+19639011 Msa1184090:CDS
AAAAGTGGTTCTGAGATAAA+GGG 0.465819 8_1:+19638507 Msa1184090:CDS
TTGAAGGGAATGTGGATGTT+TGG 0.467882 8_1:+19638703 Msa1184090:CDS
AGAAGAGGAGTTGATTGAAA+AGG 0.470802 8_1:+19638830 Msa1184090:CDS
GGATTTCCTTGGGATAAGCT+TGG 0.474458 8_1:+19638450 Msa1184090:CDS
CCCATAGCCCTCATCAGATT+GGG 0.475310 8_1:-19639056 None:intergenic
AAACTATTCCATTGCAAGCA+TGG 0.484064 8_1:+19639580 Msa1184090:CDS
TCCCAATCTGATGAGGGCTA+TGG 0.486736 8_1:+19639055 Msa1184090:CDS
ACTTATAATCTGGTACTACA+TGG 0.490214 8_1:+19639997 Msa1184090:three_prime_UTR
GATTCTTGAGTATGGAGAAG+AGG 0.500875 8_1:+19638815 Msa1184090:CDS
CGAGGTTCAGATTCCATATG+TGG 0.503568 8_1:+19639531 Msa1184090:CDS
ATTTGGGAGGGTGTGTTGAA+GGG 0.510382 8_1:+19638688 Msa1184090:CDS
GAAGAACTATGCTCATGCGT+TGG 0.510932 8_1:+19639010 Msa1184090:CDS
AGCATAAGGGATGGATCTTG+TGG 0.512701 8_1:-19637540 None:intergenic
TTATGATTTGAGTGATGGTA+AGG 0.517430 8_1:+19638755 Msa1184090:CDS
AGGGTGTGTTGAAGGGAATG+TGG 0.519392 8_1:+19638695 Msa1184090:CDS
GGGAAGATAGGTGAACTCAT+TGG 0.519466 8_1:+19638777 Msa1184090:CDS
ATTTGCGGTGAAGTGCAGGC+AGG 0.520172 8_1:-19637367 None:intergenic
TAAGGTTGGTGTGATGATGT+TGG 0.525262 8_1:-19637432 None:intergenic
CACATTGGAATGGATTCTAA+AGG 0.534379 8_1:+19638972 Msa1184090:CDS
AATACAACCAATAGTTTACA+AGG 0.538285 8_1:-19640440 None:intergenic
ACCCGGCTGCTCCAAAACAT+TGG 0.539925 8_1:+19639648 Msa1184090:CDS
GTTGCTTTCTGATTTGAGGT+TGG 0.540360 8_1:+19638650 Msa1184090:CDS
CGATCAGATGAATGAATGAA+AGG 0.541131 8_1:+19637333 Msa1184090:exon
AAAGAGTCATATAGATTCCA+AGG 0.543258 8_1:-19639949 None:intergenic
CAAGTTTCTTGTGGCGACAA+GGG 0.543532 8_1:-19637475 None:intergenic
TTCTTATACATTGCCAATTG+GGG 0.544657 8_1:+19640075 Msa1184090:three_prime_UTR
ATGTATAGGATAAAACTCCT+TGG 0.545418 8_1:+19639932 Msa1184090:three_prime_UTR
TCTGATCGGCAAAAGCATAA+GGG 0.549804 8_1:-19637553 None:intergenic
GACAATTATTATGGCACTGA+GGG 0.552306 8_1:+19640561 Msa1184090:three_prime_UTR
TTAAGGCAATTCATGATGCA+AGG 0.553764 8_1:+19639189 Msa1184090:CDS
GCTGTTGAAACACATTGGAA+TGG 0.554139 8_1:+19638962 Msa1184090:CDS
CGAATCTTCCCAATCTGATG+AGG 0.559311 8_1:+19639048 Msa1184090:CDS
GCAAGTTTCTTGTGGCGACA+AGG 0.559841 8_1:-19637476 None:intergenic
GTGTGCACGCACAAGTGTGT+GGG 0.566019 8_1:-19640039 None:intergenic
CATGATAAAGGTTATCAAAG+TGG 0.567037 8_1:+19639164 Msa1184090:CDS
TTTGCGGTGAAGTGCAGGCA+GGG 0.567208 8_1:-19637366 None:intergenic
TTGTAGATTCAGTGTCGAGA+AGG 0.567935 8_1:+19638863 Msa1184090:CDS
AGTGTCCCATATCCTGACAT+AGG 0.569168 8_1:-19639445 None:intergenic
AGTCGCAACCATGCTTGCAA+TGG 0.573982 8_1:-19639588 None:intergenic
TGTAACATTAATGATAGTTG+TGG 0.574036 8_1:+19640144 Msa1184090:three_prime_UTR
GGTGTGATTTATACGGAGAG+TGG 0.575450 8_1:+19638471 Msa1184090:CDS
ATGATTTGAGTGATGGTAAG+GGG 0.577556 8_1:+19638757 Msa1184090:CDS
TGTGTGCACGCACAAGTGTG+TGG 0.578666 8_1:-19640040 None:intergenic
GACAATTATTAATGGACGGA+GGG 0.579845 8_1:-19640347 None:intergenic
TACAAAGTGTTGTCAAGTAG+TGG 0.582011 8_1:+19640274 Msa1184090:three_prime_UTR
AATATCTTAAATCACATGCA+TGG 0.582398 8_1:+19639284 Msa1184090:CDS
ATAGCTCGGTTGATTCTACA+AGG 0.584030 8_1:+19638891 Msa1184090:CDS
AATTTACTCATATTGTGAGA+CGG 0.584295 8_1:-19639215 None:intergenic
TATGATTTGAGTGATGGTAA+GGG 0.587020 8_1:+19638756 Msa1184090:CDS
AGTAGTGGCTATAGCGCAGT+GGG 0.590027 8_1:+19640211 Msa1184090:three_prime_UTR
AAGGGATGGATCTTGTGGAA+TGG 0.590760 8_1:-19637535 None:intergenic
CATGGTTGCGACTAGTGACA+AGG 0.592546 8_1:+19639598 Msa1184090:CDS
TAGATTCAGTGTCGAGAAGG+AGG 0.595864 8_1:+19638866 Msa1184090:CDS
ATCGGCAAAAGCATAAGGGA+TGG 0.596160 8_1:-19637549 None:intergenic
ATGTGACAATTATTAATGGA+CGG 0.601171 8_1:-19640351 None:intergenic
GTGACACTGCAAGTTTCTTG+TGG 0.612434 8_1:-19637484 None:intergenic
TGTAAGATAGTAATAGCCAA+AGG 0.616401 8_1:+19639971 Msa1184090:three_prime_UTR
AGTCCAATATTGTCAAGTAG+TGG 0.618749 8_1:+19640196 Msa1184090:three_prime_UTR
TTGAAGCTGTTGAAACACAT+TGG 0.621474 8_1:+19638957 Msa1184090:CDS
GAATCTTCCCAATCTGATGA+GGG 0.621938 8_1:+19639049 Msa1184090:CDS
ATCACACCAAGCTTATCCCA+AGG 0.624221 8_1:-19638456 None:intergenic
GCAAATTGAAAGTGATGTTG+CGG 0.624516 8_1:+19637384 Msa1184090:CDS
CACATATGGAATCTGAACCT+CGG 0.628454 8_1:-19639530 None:intergenic
AGATAGGTGAACTCATTGGA+AGG 0.629844 8_1:+19638781 Msa1184090:CDS
CTTATAATCTGGTACTACAT+GGG 0.638930 8_1:+19639998 Msa1184090:three_prime_UTR
AAGTCAAAACATATAAACGC+CGG 0.641278 8_1:-19639491 None:intergenic
TGTGCACGCACAAGTGTGTG+GGG 0.644919 8_1:-19640038 None:intergenic
AAAACTCAAACTCATTGATG+GGG 0.654476 8_1:-19638311 None:intergenic
GTGGTTCTGAGATAAAGGGT+AGG 0.659181 8_1:+19638511 Msa1184090:CDS
TGACAATTATTAATGGACGG+AGG 0.660040 8_1:-19640348 None:intergenic
TCGAGAAGGAGGAAATAGCT+CGG 0.662293 8_1:+19638877 Msa1184090:CDS
GAGGTTCAGATTCCATATGT+GGG 0.667584 8_1:+19639532 Msa1184090:CDS
TAGAGAACCGAATTAAGCCG+AGG 0.677310 8_1:+19639513 Msa1184090:CDS
AAGTAGTGGCTATAGCGCAG+TGG 0.685732 8_1:+19640210 Msa1184090:three_prime_UTR
ATGGTTGCGACTAGTGACAA+GGG 0.685800 8_1:+19639599 Msa1184090:CDS
TGACAATTATTATGGCACTG+AGG 0.708195 8_1:+19640560 Msa1184090:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGATTTTGTAAATCAATTT+TGG - chr8_1:19637793-19637812 None:intergenic 15.0%
!!! ATTGATCAAATTTTTTGAAA+TGG + chr8_1:19638105-19638124 Msa1184090:intron 15.0%
!!! TATTTCTAATTACACAATTT+TGG - chr8_1:19638135-19638154 None:intergenic 15.0%
!! AAATTGTGTAATTAGAAATA+AGG + chr8_1:19638135-19638154 Msa1184090:intron 15.0%
!! AATTGTGTAATTAGAAATAA+GGG + chr8_1:19638136-19638155 Msa1184090:intron 15.0%
!!! AAAGCAAGATAAATATTTTT+AGG - chr8_1:19639816-19639835 None:intergenic 15.0%
!! GTGTAAAATTAATTCCAAAA+TGG + chr8_1:19637738-19637757 Msa1184090:intron 20.0%
!!! ATTTTGTAAATCAATTTTGG+AGG - chr8_1:19637790-19637809 None:intergenic 20.0%
!!! AAAATTGATTTTGACATGTT+TGG + chr8_1:19637879-19637898 Msa1184090:intron 20.0%
!!! TTCTAGAATTAACTATCTTT+TGG + chr8_1:19637973-19637992 Msa1184090:intron 20.0%
!!! TGTTGAGAATCTTTAAAAAT+AGG - chr8_1:19638011-19638030 None:intergenic 20.0%
!! TTTAAAGATTCTCAACAATT+AGG + chr8_1:19638014-19638033 Msa1184090:intron 20.0%
!!! TAGTTATAATAATGCAGTTT+TGG - chr8_1:19638195-19638214 None:intergenic 20.0%
!! AAAACTGCATTATTATAACT+AGG + chr8_1:19638194-19638213 Msa1184090:intron 20.0%
!!! TTAACTTTTCCTTTTGTTTT+TGG + chr8_1:19638588-19638607 Msa1184090:CDS 20.0%
!! TTAAATTTCATGCATACTAT+TGG + chr8_1:19639236-19639255 Msa1184090:CDS 20.0%
!! CAAATTGAATTGGAAAATAA+TGG - chr8_1:19639740-19639759 None:intergenic 20.0%
!! TCATATGTGACAATTATTAA+TGG - chr8_1:19640358-19640377 None:intergenic 20.0%
!!! TTCATTCTCTTTTATTTATC+AGG - chr8_1:19640404-19640423 None:intergenic 20.0%
!!! ATTTTATCCTTGTAAACTAT+TGG + chr8_1:19640433-19640452 Msa1184090:three_prime_UTR 20.0%
!!! TTTCTTTTTTGAGGAGTTTA+AGG - chr8_1:19637453-19637472 None:intergenic 25.0%
!!! TGAATTTTTGGAAATCTGAT+CGG - chr8_1:19637570-19637589 None:intergenic 25.0%
!! GAGAGAATGAAATGAATTTT+TGG - chr8_1:19637582-19637601 None:intergenic 25.0%
!!! TTCTTTTTCACCAAAAAACT+TGG + chr8_1:19637625-19637644 Msa1184090:CDS 25.0%
!! CAAGAACTTTTCAACTTTTT+TGG - chr8_1:19637660-19637679 None:intergenic 25.0%
! AAAAAGTTGAAAAGTTCTTG+AGG + chr8_1:19637660-19637679 Msa1184090:CDS 25.0%
!! ATTTTCTCCATTTGTATGTT+TGG + chr8_1:19637695-19637714 Msa1184090:intron 25.0%
! TGACCTAACATAAAATAGAA+TGG - chr8_1:19638040-19638059 None:intergenic 25.0%
!!! GATCAAATTTTTTGAAATGG+AGG + chr8_1:19638108-19638127 Msa1184090:intron 25.0%
! AAAAACTCAAACTCATTGAT+GGG - chr8_1:19638315-19638334 None:intergenic 25.0%
! CAAAAAAAGAACTTATCGTT+CGG - chr8_1:19638384-19638403 None:intergenic 25.0%
!! CTTTGTTTGTTGAAAAGATA+TGG + chr8_1:19638534-19638553 Msa1184090:CDS 25.0%
!! TTTTGTAATGTGCAAATTGT+TGG + chr8_1:19638558-19638577 Msa1184090:CDS 25.0%
! TTTGTAATGTGCAAATTGTT+GGG + chr8_1:19638559-19638578 Msa1184090:CDS 25.0%
!!! GTGTTTTTGGATTTTGATTT+GGG + chr8_1:19638672-19638691 Msa1184090:CDS 25.0%
! AAACATTTGATTCTTGAGTA+TGG + chr8_1:19638807-19638826 Msa1184090:CDS 25.0%
!!! ATGGTTTTTCGATAAAATCA+AGG + chr8_1:19639088-19639107 Msa1184090:CDS 25.0%
!!! TTTTTCGATAAAATCAAGGA+TGG + chr8_1:19639092-19639111 Msa1184090:CDS 25.0%
!! TTTTCGATAAAATCAAGGAT+GGG + chr8_1:19639093-19639112 Msa1184090:CDS 25.0%
! AATTTACTCATATTGTGAGA+CGG - chr8_1:19639218-19639237 None:intergenic 25.0%
!! CATGTGATTTAAGATATTCA+TGG - chr8_1:19639282-19639301 None:intergenic 25.0%
! AATATCTTAAATCACATGCA+TGG + chr8_1:19639284-19639303 Msa1184090:CDS 25.0%
! AAAGATTAATTTCCTATGTC+AGG + chr8_1:19639433-19639452 Msa1184090:CDS 25.0%
! TTTATCAAAGAGCAAAGAAT+AGG - chr8_1:19639780-19639799 None:intergenic 25.0%
! TGTAACATTAATGATAGTTG+TGG + chr8_1:19640144-19640163 Msa1184090:three_prime_UTR 25.0%
! ATGTGACAATTATTAATGGA+CGG - chr8_1:19640354-19640373 None:intergenic 25.0%
! AATACAACCAATAGTTTACA+AGG - chr8_1:19640443-19640462 None:intergenic 25.0%
!! ACCAAAAAAGAGAATCTTTT+TGG + chr8_1:19640489-19640508 Msa1184090:three_prime_UTR 25.0%
!! CCAAAAAAGAGAATCTTTTT+GGG + chr8_1:19640490-19640509 Msa1184090:three_prime_UTR 25.0%
!!! TTTTGGGACAAATAATCTTT+TGG + chr8_1:19640506-19640525 Msa1184090:three_prime_UTR 25.0%
!!! TTTGGGACAAATAATCTTTT+GGG + chr8_1:19640507-19640526 Msa1184090:three_prime_UTR 25.0%
! AGCAAATGTGACAATTATTA+TGG + chr8_1:19640552-19640571 Msa1184090:three_prime_UTR 25.0%
!!! TTTTTTGAGGAGTTTAAGGT+TGG - chr8_1:19637449-19637468 None:intergenic 30.0%
!! ACAAGGGATTTTCTTTTTTG+AGG - chr8_1:19637462-19637481 None:intergenic 30.0%
TCTAATCTCATTTCGAAGTT+GGG + chr8_1:19637602-19637621 Msa1184090:CDS 30.0%
!!! GTGAAAGAATCCAAGTTTTT+TGG - chr8_1:19637638-19637657 None:intergenic 30.0%
! AACCAAGTTTCAATTTTGGA+AGG + chr8_1:19637833-19637852 Msa1184090:intron 30.0%
!! ACCAAGTTTCAATTTTGGAA+GGG + chr8_1:19637834-19637853 Msa1184090:intron 30.0%
! AGGCCATTCTATTTTATGTT+AGG + chr8_1:19638034-19638053 Msa1184090:intron 30.0%
!! ATTTTGACCATCCAATTTGA+TGG - chr8_1:19638080-19638099 None:intergenic 30.0%
! TACTGACAAAACAGCAATTT+TGG - chr8_1:19638164-19638183 None:intergenic 30.0%
!!! AATTGCTGTTTTGTCAGTAT+AGG + chr8_1:19638165-19638184 Msa1184090:intron 30.0%
!!! ATTGCTGTTTTGTCAGTATA+GGG + chr8_1:19638166-19638185 Msa1184090:intron 30.0%
TGATTATCTGTATTGTCAAC+AGG + chr8_1:19638283-19638302 Msa1184090:intron 30.0%
AAAACTCAAACTCATTGATG+GGG - chr8_1:19638314-19638333 None:intergenic 30.0%
GAAAAACTCAAACTCATTGA+TGG - chr8_1:19638316-19638335 None:intergenic 30.0%
!! GAGTTTTTCTTTGAAAGCAT+TGG + chr8_1:19638327-19638346 Msa1184090:CDS 30.0%
TTTGTGAATTTGGATTTCCT+TGG + chr8_1:19638439-19638458 Msa1184090:CDS 30.0%
TTGTGAATTTGGATTTCCTT+GGG + chr8_1:19638440-19638459 Msa1184090:CDS 30.0%
!! TAAGCTTGGTGTGATTTATA+CGG + chr8_1:19638464-19638483 Msa1184090:CDS 30.0%
!! GGTTTTATGTTTAGGAAAAG+TGG + chr8_1:19638492-19638511 Msa1184090:CDS 30.0%
!! AAAAGTGGTTCTGAGATAAA+GGG + chr8_1:19638507-19638526 Msa1184090:CDS 30.0%
!!! GGTGTTTTTGGATTTTGATT+TGG + chr8_1:19638671-19638690 Msa1184090:CDS 30.0%
!!! TTTTTGGATTTTGATTTGGG+AGG + chr8_1:19638675-19638694 Msa1184090:CDS 30.0%
!!! TTTTGGATTTTGATTTGGGA+GGG + chr8_1:19638676-19638695 Msa1184090:CDS 30.0%
ATGTTTGGTATGATGTTTGT+AGG + chr8_1:19638718-19638737 Msa1184090:CDS 30.0%
! GTGTTTTATGATTTGAGTGA+TGG + chr8_1:19638750-19638769 Msa1184090:CDS 30.0%
TTATGATTTGAGTGATGGTA+AGG + chr8_1:19638755-19638774 Msa1184090:CDS 30.0%
TATGATTTGAGTGATGGTAA+GGG + chr8_1:19638756-19638775 Msa1184090:CDS 30.0%
CATGATAAAGGTTATCAAAG+TGG + chr8_1:19639164-19639183 Msa1184090:CDS 30.0%
!! AGGTTATCAAAGTGGTTTTA+AGG + chr8_1:19639172-19639191 Msa1184090:CDS 30.0%
TTTGATTGCCTTCTACATTT+AGG + chr8_1:19639332-19639351 Msa1184090:CDS 30.0%
TTGATTGCCTTCTACATTTA+GGG + chr8_1:19639333-19639352 Msa1184090:CDS 30.0%
ATTCAATCCCTAAATGTAGA+AGG - chr8_1:19639343-19639362 None:intergenic 30.0%
!!! ATCTTTTTCTCTAGAGTTTC+AGG - chr8_1:19639419-19639438 None:intergenic 30.0%
TAATTTCCTATGTCAGGATA+TGG + chr8_1:19639439-19639458 Msa1184090:CDS 30.0%
AATTTCCTATGTCAGGATAT+GGG + chr8_1:19639440-19639459 Msa1184090:CDS 30.0%
AAGTCAAAACATATAAACGC+CGG - chr8_1:19639494-19639513 None:intergenic 30.0%
! AATTGCTCAAACCAATGTTT+TGG - chr8_1:19639662-19639681 None:intergenic 30.0%
CATGAAGCTCGAAATTTATT+GGG - chr8_1:19639689-19639708 None:intergenic 30.0%
TCATGAAGCTCGAAATTTAT+TGG - chr8_1:19639690-19639709 None:intergenic 30.0%
ATGTATAGGATAAAACTCCT+TGG + chr8_1:19639932-19639951 Msa1184090:three_prime_UTR 30.0%
AAAGAGTCATATAGATTCCA+AGG - chr8_1:19639952-19639971 None:intergenic 30.0%
TGTAAGATAGTAATAGCCAA+AGG + chr8_1:19639971-19639990 Msa1184090:three_prime_UTR 30.0%
ACTTATAATCTGGTACTACA+TGG + chr8_1:19639997-19640016 Msa1184090:three_prime_UTR 30.0%
CTTATAATCTGGTACTACAT+GGG + chr8_1:19639998-19640017 Msa1184090:three_prime_UTR 30.0%
CTTCTTATACATTGCCAATT+GGG + chr8_1:19640074-19640093 Msa1184090:three_prime_UTR 30.0%
TTCTTATACATTGCCAATTG+GGG + chr8_1:19640075-19640094 Msa1184090:three_prime_UTR 30.0%
!!! CCCAAAAAGATTCTCTTTTT+TGG - chr8_1:19640493-19640512 None:intergenic 30.0%
CGATCAGATGAATGAATGAA+AGG + chr8_1:19637333-19637352 Msa1184090:exon 35.0%
GCAACATCACTTTCAATTTG+CGG - chr8_1:19637385-19637404 None:intergenic 35.0%
GCAAATTGAAAGTGATGTTG+CGG + chr8_1:19637384-19637403 Msa1184090:CDS 35.0%
! TGGAACAGAAATGTCGTTTA+AGG - chr8_1:19637415-19637434 None:intergenic 35.0%
CTCTAATCTCATTTCGAAGT+TGG + chr8_1:19637601-19637620 Msa1184090:CDS 35.0%
CGTGAAACCAAACATACAAA+TGG - chr8_1:19637705-19637724 None:intergenic 35.0%
! TACTAGAGAGCAATCCATTT+TGG - chr8_1:19637755-19637774 None:intergenic 35.0%
! GCAGAACCAAGTTTCAATTT+TGG + chr8_1:19637829-19637848 Msa1184090:intron 35.0%
AAGCTAGAATTTGTAGCTGT+TGG + chr8_1:19637949-19637968 Msa1184090:intron 35.0%
!!! TTGCTGTTTTGTCAGTATAG+GGG + chr8_1:19638167-19638186 Msa1184090:intron 35.0%
ATCAGAGAGAGTAACAAATG+AGG - chr8_1:19638267-19638286 None:intergenic 35.0%
!! GAAAAGTGGTTCTGAGATAA+AGG + chr8_1:19638506-19638525 Msa1184090:CDS 35.0%
! TTATCGATGATGAGGTTGAT+AGG + chr8_1:19638628-19638647 Msa1184090:CDS 35.0%
! ATAGGTTGCTTTCTGATTTG+AGG + chr8_1:19638646-19638665 Msa1184090:CDS 35.0%
!!! TGATTTGAGGTTGGTGTTTT+TGG + chr8_1:19638659-19638678 Msa1184090:CDS 35.0%
ATGATTTGAGTGATGGTAAG+GGG + chr8_1:19638757-19638776 Msa1184090:CDS 35.0%
! AGAAGAGGAGTTGATTGAAA+AGG + chr8_1:19638830-19638849 Msa1184090:CDS 35.0%
TTGAAGCTGTTGAAACACAT+TGG + chr8_1:19638957-19638976 Msa1184090:CDS 35.0%
! CACATTGGAATGGATTCTAA+AGG + chr8_1:19638972-19638991 Msa1184090:CDS 35.0%
TGCGTTGGGAACAATAAAAA+TGG + chr8_1:19639025-19639044 Msa1184090:CDS 35.0%
! TGGGAATCATAAGCTTTTAG+TGG + chr8_1:19639112-19639131 Msa1184090:CDS 35.0%
CCTTTATCATGCTCTTCATT+GGG - chr8_1:19639155-19639174 None:intergenic 35.0%
ACCTTTATCATGCTCTTCAT+TGG - chr8_1:19639156-19639175 None:intergenic 35.0%
TTAAGGCAATTCATGATGCA+AGG + chr8_1:19639189-19639208 Msa1184090:CDS 35.0%
!! TTCATGCATACTATTGGCTT+TGG + chr8_1:19639242-19639261 Msa1184090:CDS 35.0%
!!! GGATTTTGGCTTAGAATCTT+TGG - chr8_1:19639398-19639417 None:intergenic 35.0%
!!! TCTCTAGAGTTTCAGGATTT+TGG - chr8_1:19639412-19639431 None:intergenic 35.0%
!! AAAAGTGTCCAAAAGCTCTA+AGG - chr8_1:19639471-19639490 None:intergenic 35.0%
!! CATATGTGGGCTTTAGAAAA+GGG + chr8_1:19639545-19639564 Msa1184090:CDS 35.0%
AAACTATTCCATTGCAAGCA+TGG + chr8_1:19639580-19639599 Msa1184090:CDS 35.0%
!! CCGGGTGAATTTTAAAAACA+CGG - chr8_1:19639634-19639653 None:intergenic 35.0%
!!! CCGTGTTTTTAAAATTCACC+CGG + chr8_1:19639631-19639650 Msa1184090:CDS 35.0%
GAGATCTGTGCAAATTGAAT+TGG - chr8_1:19639750-19639769 None:intergenic 35.0%
TGAGTTCTGTCATGATGTAT+AGG + chr8_1:19639918-19639937 Msa1184090:three_prime_UTR 35.0%
CCAGATTATAAGTCAACCTT+TGG - chr8_1:19639990-19640009 None:intergenic 35.0%
! CCAAAGGTTGACTTATAATC+TGG + chr8_1:19639987-19640006 Msa1184090:three_prime_UTR 35.0%
GCTTCTTATACATTGCCAAT+TGG + chr8_1:19640073-19640092 Msa1184090:three_prime_UTR 35.0%
AGTCCAATATTGTCAAGTAG+TGG + chr8_1:19640196-19640215 Msa1184090:three_prime_UTR 35.0%
TAGCCACTACTTGACAATAT+TGG - chr8_1:19640202-19640221 None:intergenic 35.0%
!! TACAAAGTGTTGTCAAGTAG+TGG + chr8_1:19640274-19640293 Msa1184090:three_prime_UTR 35.0%
! GACAATTATTAATGGACGGA+GGG - chr8_1:19640350-19640369 None:intergenic 35.0%
! TGACAATTATTAATGGACGG+AGG - chr8_1:19640351-19640370 None:intergenic 35.0%
TGACAATTATTATGGCACTG+AGG + chr8_1:19640560-19640579 Msa1184090:three_prime_UTR 35.0%
!! TAAGGTTGGTGTGATGATGT+TGG - chr8_1:19637435-19637454 None:intergenic 40.0%
! TCTGATCGGCAAAAGCATAA+GGG - chr8_1:19637556-19637575 None:intergenic 40.0%
! ATCTGATCGGCAAAAGCATA+AGG - chr8_1:19637557-19637576 None:intergenic 40.0%
GCCCTTCCAAAATTGAAACT+TGG - chr8_1:19637838-19637857 None:intergenic 40.0%
AAATTGCCACGCCATCAAAT+TGG + chr8_1:19638066-19638085 Msa1184090:intron 40.0%
!!! TGCTGTTTTGTCAGTATAGG+GGG + chr8_1:19638168-19638187 Msa1184090:intron 40.0%
GCTTGTGTGCTTTGTGAATT+TGG + chr8_1:19638429-19638448 Msa1184090:CDS 40.0%
!!! CGGAGAGTGGTTTTATGTTT+AGG + chr8_1:19638484-19638503 Msa1184090:CDS 40.0%
! GTTGCTTTCTGATTTGAGGT+TGG + chr8_1:19638650-19638669 Msa1184090:CDS 40.0%
TTGAAGGGAATGTGGATGTT+TGG + chr8_1:19638703-19638722 Msa1184090:CDS 40.0%
AGATAGGTGAACTCATTGGA+AGG + chr8_1:19638781-19638800 Msa1184090:CDS 40.0%
GATTCTTGAGTATGGAGAAG+AGG + chr8_1:19638815-19638834 Msa1184090:CDS 40.0%
! TTGTAGATTCAGTGTCGAGA+AGG + chr8_1:19638863-19638882 Msa1184090:CDS 40.0%
! ATAGCTCGGTTGATTCTACA+AGG + chr8_1:19638891-19638910 Msa1184090:CDS 40.0%
! TCGGTTGATTCTACAAGGTT+CGG + chr8_1:19638896-19638915 Msa1184090:CDS 40.0%
GGAGTTGTTGAGTCTCAATT+TGG + chr8_1:19638917-19638936 Msa1184090:CDS 40.0%
GCTGTTGAAACACATTGGAA+TGG + chr8_1:19638962-19638981 Msa1184090:CDS 40.0%
! GGAATGGATTCTAAAGGTCT+TGG + chr8_1:19638978-19638997 Msa1184090:CDS 40.0%
AAGAACTATGCTCATGCGTT+GGG + chr8_1:19639011-19639030 Msa1184090:CDS 40.0%
GAATCTTCCCAATCTGATGA+GGG + chr8_1:19639049-19639068 Msa1184090:CDS 40.0%
! CCCAATGAAGAGCATGATAA+AGG + chr8_1:19639152-19639171 Msa1184090:CDS 40.0%
! AGAGCTTTTGGACACTTTTC+CGG + chr8_1:19639472-19639491 Msa1184090:CDS 40.0%
ATCTGAACCTCGGCTTAATT+CGG - chr8_1:19639523-19639542 None:intergenic 40.0%
CACATATGGAATCTGAACCT+CGG - chr8_1:19639533-19639552 None:intergenic 40.0%
GAGGTTCAGATTCCATATGT+GGG + chr8_1:19639532-19639551 Msa1184090:CDS 40.0%
!!! CCTTTTCTAAAGCCCACATA+TGG - chr8_1:19639547-19639566 None:intergenic 40.0%
!! CCATATGTGGGCTTTAGAAA+AGG + chr8_1:19639544-19639563 Msa1184090:CDS 40.0%
!! ACTAGTGACAAGGGTTTTGT+TGG + chr8_1:19639608-19639627 Msa1184090:CDS 40.0%
TATACATTGCCAATTGGGGT+TGG + chr8_1:19640079-19640098 Msa1184090:three_prime_UTR 40.0%
ATACATTGCCAATTGGGGTT+GGG + chr8_1:19640080-19640099 Msa1184090:three_prime_UTR 40.0%
TTCAATTTGCGGTGAAGTGC+AGG - chr8_1:19637374-19637393 None:intergenic 45.0%
CAAGTTTCTTGTGGCGACAA+GGG - chr8_1:19637478-19637497 None:intergenic 45.0%
GTGACACTGCAAGTTTCTTG+TGG - chr8_1:19637487-19637506 None:intergenic 45.0%
AAGGGATGGATCTTGTGGAA+TGG - chr8_1:19637538-19637557 None:intergenic 45.0%
AGCATAAGGGATGGATCTTG+TGG - chr8_1:19637543-19637562 None:intergenic 45.0%
! ATCGGCAAAAGCATAAGGGA+TGG - chr8_1:19637552-19637571 None:intergenic 45.0%
! GGTTTCACGTTCGTTCTAGA+TGG + chr8_1:19637716-19637735 Msa1184090:intron 45.0%
GGATTTCCTTGGGATAAGCT+TGG + chr8_1:19638450-19638469 Msa1184090:CDS 45.0%
ATCACACCAAGCTTATCCCA+AGG - chr8_1:19638459-19638478 None:intergenic 45.0%
GGTGTGATTTATACGGAGAG+TGG + chr8_1:19638471-19638490 Msa1184090:CDS 45.0%
!! GTGGTTCTGAGATAAAGGGT+AGG + chr8_1:19638511-19638530 Msa1184090:CDS 45.0%
!!! TCCTTTTGTTTTTGGTGCCG+AGG + chr8_1:19638596-19638615 Msa1184090:CDS 45.0%
TCCTCGGCACCAAAAACAAA+AGG - chr8_1:19638600-19638619 None:intergenic 45.0%
!!! TTTGTTTTTGGTGCCGAGGA+AGG + chr8_1:19638600-19638619 Msa1184090:CDS 45.0%
!!! TTGTTTTTGGTGCCGAGGAA+GGG + chr8_1:19638601-19638620 Msa1184090:CDS 45.0%
ATCGATAAATCCCCCTTCCT+CGG - chr8_1:19638616-19638635 None:intergenic 45.0%
AGGGGGATTTATCGATGATG+AGG + chr8_1:19638620-19638639 Msa1184090:CDS 45.0%
! ATTTGGGAGGGTGTGTTGAA+GGG + chr8_1:19638688-19638707 Msa1184090:CDS 45.0%
AGTGATGGTAAGGGGAAGAT+AGG + chr8_1:19638765-19638784 Msa1184090:CDS 45.0%
GGGAAGATAGGTGAACTCAT+TGG + chr8_1:19638777-19638796 Msa1184090:CDS 45.0%
! TAGATTCAGTGTCGAGAAGG+AGG + chr8_1:19638866-19638885 Msa1184090:CDS 45.0%
TCGAGAAGGAGGAAATAGCT+CGG + chr8_1:19638877-19638896 Msa1184090:CDS 45.0%
GAAGAACTATGCTCATGCGT+TGG + chr8_1:19639010-19639029 Msa1184090:CDS 45.0%
CGAATCTTCCCAATCTGATG+AGG + chr8_1:19639048-19639067 Msa1184090:CDS 45.0%
AGTGTCCCATATCCTGACAT+AGG - chr8_1:19639448-19639467 None:intergenic 45.0%
TAGAGAACCGAATTAAGCCG+AGG + chr8_1:19639513-19639532 Msa1184090:CDS 45.0%
CGAGGTTCAGATTCCATATG+TGG + chr8_1:19639531-19639550 Msa1184090:CDS 45.0%
ATGGTTGCGACTAGTGACAA+GGG + chr8_1:19639599-19639618 Msa1184090:CDS 45.0%
!!! AACCAATGTTTTGGAGCAGC+CGG - chr8_1:19639653-19639672 None:intergenic 45.0%
TGTCACGTTGCAGTGCTATA+GGG - chr8_1:19640309-19640328 None:intergenic 45.0%
GCAAGTTTCTTGTGGCGACA+AGG - chr8_1:19637479-19637498 None:intergenic 50.0%
TGCCACGCCATCAAATTGGA+TGG + chr8_1:19638070-19638089 Msa1184090:intron 50.0%
!! GACCATCCAATTTGATGGCG+TGG - chr8_1:19638075-19638094 None:intergenic 50.0%
!!! TGTTTTTGGTGCCGAGGAAG+GGG + chr8_1:19638602-19638621 Msa1184090:CDS 50.0%
! GATTTGGGAGGGTGTGTTGA+AGG + chr8_1:19638687-19638706 Msa1184090:CDS 50.0%
AGGGTGTGTTGAAGGGAATG+TGG + chr8_1:19638695-19638714 Msa1184090:CDS 50.0%
TCCCAATCTGATGAGGGCTA+TGG + chr8_1:19639055-19639074 Msa1184090:CDS 50.0%
CCCATAGCCCTCATCAGATT+GGG - chr8_1:19639059-19639078 None:intergenic 50.0%
CCCAATCTGATGAGGGCTAT+GGG + chr8_1:19639056-19639075 Msa1184090:CDS 50.0%
ACCCATAGCCCTCATCAGAT+TGG - chr8_1:19639060-19639079 None:intergenic 50.0%
GGGCTATGGGTTTACGTGAA+TGG + chr8_1:19639069-19639088 Msa1184090:CDS 50.0%
! GGGACACTCCTTAGAGCTTT+TGG + chr8_1:19639460-19639479 Msa1184090:CDS 50.0%
AGTCGCAACCATGCTTGCAA+TGG - chr8_1:19639591-19639610 None:intergenic 50.0%
CATGGTTGCGACTAGTGACA+AGG + chr8_1:19639598-19639617 Msa1184090:CDS 50.0%
!!! ACCAATGTTTTGGAGCAGCC+GGG - chr8_1:19639652-19639671 None:intergenic 50.0%
CCAATTGGGGTTGGGTTACA+GGG + chr8_1:19640088-19640107 Msa1184090:three_prime_UTR 50.0%
AAGTAGTGGCTATAGCGCAG+TGG + chr8_1:19640210-19640229 Msa1184090:three_prime_UTR 50.0%
AGTAGTGGCTATAGCGCAGT+GGG + chr8_1:19640211-19640230 Msa1184090:three_prime_UTR 50.0%
CTGTCACGTTGCAGTGCTAT+AGG - chr8_1:19640310-19640329 None:intergenic 50.0%
TTTGCGGTGAAGTGCAGGCA+GGG - chr8_1:19637369-19637388 None:intergenic 55.0%
ATTTGCGGTGAAGTGCAGGC+AGG - chr8_1:19637370-19637389 None:intergenic 55.0%
!!! GTTTTTGGTGCCGAGGAAGG+GGG + chr8_1:19638603-19638622 Msa1184090:CDS 55.0%
ACCCGGCTGCTCCAAAACAT+TGG + chr8_1:19639648-19639667 Msa1184090:CDS 55.0%
TGTGCACGCACAAGTGTGTG+GGG - chr8_1:19640041-19640060 None:intergenic 55.0%
GTGTGCACGCACAAGTGTGT+GGG - chr8_1:19640042-19640061 None:intergenic 55.0%
TGTGTGCACGCACAAGTGTG+TGG - chr8_1:19640043-19640062 None:intergenic 55.0%
GCCAATTGGGGTTGGGTTAC+AGG + chr8_1:19640087-19640106 Msa1184090:three_prime_UTR 55.0%
CCCTGTAACCCAACCCCAAT+TGG - chr8_1:19640091-19640110 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 19637329 19640583 19637329 ID=Msa1184090;Name=Msa1184090
chr8_1 mRNA 19637329 19640583 19637329 ID=Msa1184090-mRNA-1;Parent=Msa1184090;Name=Msa1184090-mRNA-1;_AED=0.21;_eAED=0.21;_QI=15|1|1|1|1|1|2|874|580
chr8_1 exon 19637329 19637681 19637329 ID=Msa1184090-mRNA-1:exon:7606;Parent=Msa1184090-mRNA-1
chr8_1 exon 19638305 19640583 19638305 ID=Msa1184090-mRNA-1:exon:7607;Parent=Msa1184090-mRNA-1
chr8_1 five_prime_UTR 19637329 19637343 19637329 ID=Msa1184090-mRNA-1:five_prime_utr;Parent=Msa1184090-mRNA-1
chr8_1 CDS 19637344 19637681 19637344 ID=Msa1184090-mRNA-1:cds;Parent=Msa1184090-mRNA-1
chr8_1 CDS 19638305 19639709 19638305 ID=Msa1184090-mRNA-1:cds;Parent=Msa1184090-mRNA-1
chr8_1 three_prime_UTR 19639710 19640583 19639710 ID=Msa1184090-mRNA-1:three_prime_utr;Parent=Msa1184090-mRNA-1
Gene Sequence

>Msa1184090

ATGAATGAAAGGAGAAAAGAAACCCTGCCTGCACTTCACCGCAAATTGAAAGTGATGTTGCGGAACAACCTTAAACGACATTTCTGTTCCAACATCATCACACCAACCTTAAACTCCTCAAAAAAGAAAATCCCTTGTCGCCACAAGAAACTTGCAGTGTCACATGCTCAAAAAGCACTCACTGAATATCTCCATTCCACAAGATCCATCCCTTATGCTTTTGCCGATCAGATTTCCAAAAATTCATTTCATTCTCTCTCTAATCTCATTTCGAAGTTGGGTTCTTTTTCACCAAAAAACTTGGATTCTTTCACCAAAAAAGTTGAAAAGTTCTTGAGGTACAACCCCATCAATGAGTTTGAGTTTTTCTTTGAAAGCATTGGAATTCATCATACACGTGTTTCTAGTTTGTTGCCGAACGATAAGTTCTTTTTTTGCGACGATGAATCACTTCTTGATTCTGCTTGTGTGCTTTGTGAATTTGGATTTCCTTGGGATAAGCTTGGTGTGATTTATACGGAGAGTGGTTTTATGTTTAGGAAAAGTGGTTCTGAGATAAAGGGTAGGCTTTGTTTGTTGAAAAGATATGGTTTTTGTAATGTGCAAATTGTTGGGATTTGTTTAACTTTTCCTTTTGTTTTTGGTGCCGAGGAAGGGGGATTTATCGATGATGAGGTTGATAGGTTGCTTTCTGATTTGAGGTTGGTGTTTTTGGATTTTGATTTGGGAGGGTGTGTTGAAGGGAATGTGGATGTTTGGTATGATGTTTGTAGGAAAATTAAAGTGTTTTATGATTTGAGTGATGGTAAGGGGAAGATAGGTGAACTCATTGGAAGGAATAAACATTTGATTCTTGAGTATGGAGAAGAGGAGTTGATTGAAAAGGTTGAGTTTTTTTGTAGATTCAGTGTCGAGAAGGAGGAAATAGCTCGGTTGATTCTACAAGGTTCGGAGTTGTTGAGTCTCAATTTGGAAGCGACGATTAACGTGTTGAAGCTGTTGAAACACATTGGAATGGATTCTAAAGGTCTTGGTGATGTGAAGAAGAACTATGCTCATGCGTTGGGAACAATAAAAATGGCGAATCTTCCCAATCTGATGAGGGCTATGGGTTTACGTGAATGGTTTTTCGATAAAATCAAGGATGGGAATCATAAGCTTTTAGTGGATTTTATCACAAGCTATCCCAATGAAGAGCATGATAAAGGTTATCAAAGTGGTTTTAAGGCAATTCATGATGCAAGGTTACCGTCTCACAATATGAGTAAATTAAATTTCATGCATACTATTGGCTTTGGTGAAAATGCTATAACCATGAATATCTTAAATCACATGCATGGAACAAGTGAAGAGTTACAGAAAAGATTTGATTGCCTTCTACATTTAGGGATTGAATTCTCAAAACTGTGTAAGATAATCACAAAGCTACCAAAGATTCTAAGCCAAAATCCTGAAACTCTAGAGAAAAAGATTAATTTCCTATGTCAGGATATGGGACACTCCTTAGAGCTTTTGGACACTTTTCCGGCGTTTATATGTTTTGACTTAGAGAACCGAATTAAGCCGAGGTTCAGATTCCATATGTGGGCTTTAGAAAAGGGATTGTATTCAAAAAACTATTCCATTGCAAGCATGGTTGCGACTAGTGACAAGGGTTTTGTTGGCCGTGTTTTTAAAATTCACCCGGCTGCTCCAAAACATTGGTTTGAGCAATTCTATCCCAATAAATTTCGAGCTTCATGA
Protein sequence

>Msa1184090

MNERRKETLPALHRKLKVMLRNNLKRHFCSNIITPTLNSSKKKIPCRHKKLAVSHAQKALTEYLHSTRSIPYAFADQISKNSFHSLSNLISKLGSFSPKNLDSFTKKVEKFLRYNPINEFEFFFESIGIHHTRVSSLLPNDKFFFCDDESLLDSACVLCEFGFPWDKLGVIYTESGFMFRKSGSEIKGRLCLLKRYGFCNVQIVGICLTFPFVFGAEEGGFIDDEVDRLLSDLRLVFLDFDLGGCVEGNVDVWYDVCRKIKVFYDLSDGKGKIGELIGRNKHLILEYGEEELIEKVEFFCRFSVEKEEIARLILQGSELLSLNLEATINVLKLLKHIGMDSKGLGDVKKNYAHALGTIKMANLPNLMRAMGLREWFFDKIKDGNHKLLVDFITSYPNEEHDKGYQSGFKAIHDARLPSHNMSKLNFMHTIGFGENAITMNILNHMHGTSEELQKRFDCLLHLGIEFSKLCKIITKLPKILSQNPETLEKKINFLCQDMGHSLELLDTFPAFICFDLENRIKPRFRFHMWALEKGLYSKNYSIASMVATSDKGFVGRVFKIHPAAPKHWFEQFYPNKFRAS*