AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1271180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1271180 MtrunA17_Chr8g0335121 94.513 565 30 1 16 580 1 564 0.0 1095
Msa1271180 MtrunA17_Chr7g0249711 56.036 555 229 6 24 572 31 576 0.0 636
Msa1271180 MtrunA17_Chr5g0438661 25.758 528 371 9 45 568 97 607 4.74e-53 191
Msa1271180 MtrunA17_Chr7g0258521 42.667 150 75 3 38 180 29 174 1.29e-24 107
Msa1271180 MtrunA17_Chr7g0258521 25.926 162 117 3 410 570 302 461 7.14e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1271180 AT3G60400.1 46.691 544 283 3 36 578 17 554 2.19e-178 516
Msa1271180 AT4G19650.2 26.476 525 351 8 54 568 85 584 5.09e-52 188
Msa1271180 AT4G19650.1 25.447 503 340 8 76 568 90 567 1.36e-44 167
Msa1271180 AT5G06810.1 25.285 526 350 13 56 567 78 574 8.03e-40 154
Msa1271180 AT5G06811.1 24.014 583 393 12 15 567 8 570 3.83e-39 151
Msa1271180 AT5G45113.1 22.803 421 295 11 157 568 7 406 2.67e-21 97.1

Find 139 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTGTGTGCTTTGTGAATT+TGG 0.075830 8_3:-4632283 Msa1271180:CDS
TCTCTAGAGTTTCAGGATTT+TGG 0.108976 8_3:+4631303 None:intergenic
TTTGATTGCCTTCTACATTT+AGG 0.135769 8_3:-4631380 Msa1271180:CDS
GCCAATTGGGGTTGGGTTAC+AGG 0.186624 8_3:-4630625 Msa1271180:three_prime_UTR
TGGAACAGAAATGTCGTTTA+AGG 0.220611 8_3:+4633161 None:intergenic
TCATATGTGACAATTATTAA+TGG 0.235205 8_3:+4630357 None:intergenic
GGGACACTCCTTAGAGCTTT+TGG 0.239993 8_3:-4631252 Msa1271180:CDS
TAATTTCCTATGTCAGGATA+TGG 0.244795 8_3:-4631273 Msa1271180:CDS
TCATGAAGCTCGAAATTTAT+TGG 0.254864 8_3:+4631025 None:intergenic
AAACATTTGATTCTTGAGTA+TGG 0.263491 8_3:-4631905 Msa1271180:CDS
TTGATTGCCTTCTACATTTA+GGG 0.265986 8_3:-4631379 Msa1271180:CDS
GAAAAGTGGTTCTGAGATAA+AGG 0.272746 8_3:-4632206 Msa1271180:CDS
TTAAATTTCATGCATACTAT+TGG 0.285045 8_3:-4631476 Msa1271180:CDS
CTTCTTATACATTGCCAATT+GGG 0.298469 8_3:-4630638 Msa1271180:three_prime_UTR
AATACAACCAATAGTTTATA+AGG 0.301523 8_3:+4630272 None:intergenic
AATTGCTCAAACCAATGTTT+TGG 0.304518 8_3:+4631053 None:intergenic
CTTTGTTTGTTGAAAAGATA+TGG 0.308280 8_3:-4632178 Msa1271180:CDS
CATGAAGCTCGAAATTTATT+GGG 0.313412 8_3:+4631026 None:intergenic
AGCAAATGTGACAATTATTA+TGG 0.317998 8_3:-4630160 Msa1271180:three_prime_UTR
CTGTCACGTTGCAGTGCTAT+AGG 0.319630 8_3:+4630405 None:intergenic
ACCTTTATCATGCTCTTCAT+TGG 0.329479 8_3:+4631559 None:intergenic
CTCTAATCTCATTTCGAAGT+TGG 0.332216 8_3:-4632972 Msa1271180:CDS
TCTAATCTCATTTCGAAGTT+GGG 0.359275 8_3:-4632971 Msa1271180:CDS
TAGCCACTACTTGACAATAT+TGG 0.364261 8_3:+4630513 None:intergenic
TTCATGCATACTATTGGCTT+TGG 0.365567 8_3:-4631470 Msa1271180:CDS
CATGTGATTTAAGATATTCA+TGG 0.366992 8_3:+4631433 None:intergenic
CCCAATGAAGAGCATGATAA+AGG 0.371844 8_3:-4631560 Msa1271180:CDS
ATCTGAACCTCGGCTTAATT+CGG 0.372746 8_3:+4631192 None:intergenic
GCTTCTTATACATTGCCAAT+TGG 0.374632 8_3:-4630639 Msa1271180:three_prime_UTR
TAAGCTTGGTGTGATTTATA+CGG 0.375925 8_3:-4632248 Msa1271180:CDS
GGAGTTGTTGAGTCTCAATT+TGG 0.376264 8_3:-4631795 Msa1271180:CDS
CCCTGTAACCCAACCCCAAT+TGG 0.381911 8_3:+4630624 None:intergenic
ATAGGTTGCTTTCTGATTTG+AGG 0.392968 8_3:-4632066 Msa1271180:CDS
GAGATCTGTGCAAATTGAAT+TGG 0.398389 8_3:+4630965 None:intergenic
TTTATCAAAGAGCAAAGAAT+AGG 0.400002 8_3:+4630935 None:intergenic
CCAATTGGGGTTGGGTTACA+GGG 0.404670 8_3:-4630624 Msa1271180:three_prime_UTR
CCTTTATCATGCTCTTCATT+GGG 0.406357 8_3:+4631560 None:intergenic
AAAGATTAATTTCCTATGTC+AGG 0.406425 8_3:-4631279 Msa1271180:CDS
CCATATGTGGGCTTTAGAAA+AGG 0.410319 8_3:-4631168 Msa1271180:CDS
GGGCTATGGGTTTACGTGAA+TGG 0.411227 8_3:-4631643 Msa1271180:CDS
TTATCGATGATGAGGTTGAT+AGG 0.413270 8_3:-4632084 Msa1271180:CDS
ATGTTTGGTATGATGTTTGT+AGG 0.414620 8_3:-4631994 Msa1271180:CDS
TTGTGAATTTGGATTTCCTT+GGG 0.415023 8_3:-4632272 Msa1271180:CDS
CAAATTGAATTGGAAAATAA+TGG 0.417661 8_3:+4630975 None:intergenic
AAAAGTGTCCAAAAGCTCTA+AGG 0.419374 8_3:+4631244 None:intergenic
CCAGATTATAAGTCAACCTT+TGG 0.419776 8_3:+4630725 None:intergenic
ATTCAATCCCTAAATGTAGA+AGG 0.419800 8_3:+4631372 None:intergenic
AGTGATGGTAAGGGGAAGAT+AGG 0.419950 8_3:-4631947 Msa1271180:CDS
ATCTGATCGGCAAAAGCATA+AGG 0.420610 8_3:+4633019 None:intergenic
TTTGTGAATTTGGATTTCCT+TGG 0.421861 8_3:-4632273 Msa1271180:CDS
GCAACATCACTTTCAATTTG+CGG 0.422663 8_3:+4633191 None:intergenic
CATATGTGGGCTTTAGAAAA+GGG 0.423473 8_3:-4631167 Msa1271180:CDS
ATACATTGCCAATTGGGGTT+GGG 0.425672 8_3:-4630632 Msa1271180:three_prime_UTR
TTCAATTTGCGGTGAAGTGC+AGG 0.426353 8_3:+4633202 None:intergenic
TATACATTGCCAATTGGGGT+TGG 0.426875 8_3:-4630633 Msa1271180:three_prime_UTR
ACCCATAGCCCTCATCAGAT+TGG 0.427036 8_3:+4631655 None:intergenic
CCAAAGGTTGACTTATAATC+TGG 0.430874 8_3:-4630725 Msa1271180:three_prime_UTR
CCCAATCTGATGAGGGCTAT+GGG 0.435992 8_3:-4631656 Msa1271180:CDS
TGTCACGTTGCAGTGCTATA+GGG 0.442941 8_3:+4630406 None:intergenic
TGAGTTCTGTCATGATGTAT+AGG 0.444477 8_3:-4630794 Msa1271180:three_prime_UTR
TTTGTAATGTGCAAATTGTT+GGG 0.448783 8_3:-4632153 Msa1271180:CDS
GATTTGGGAGGGTGTGTTGA+AGG 0.450135 8_3:-4632025 Msa1271180:CDS
AATTTCCTATGTCAGGATAT+GGG 0.450989 8_3:-4631272 Msa1271180:CDS
GGAATGGATTCTAAAGGTCT+TGG 0.453391 8_3:-4631734 Msa1271180:CDS
TCGGTTGATTCTACAAGGTT+CGG 0.454814 8_3:-4631816 Msa1271180:CDS
AAGAACTATGCTCATGCGTT+GGG 0.457899 8_3:-4631701 Msa1271180:CDS
AAAAGTGGTTCTGAGATAAA+GGG 0.465819 8_3:-4632205 Msa1271180:CDS
TTGAAGGGAATGTGGATGTT+TGG 0.467882 8_3:-4632009 Msa1271180:CDS
AGAAGAGGAGTTGATTGAAA+AGG 0.470802 8_3:-4631882 Msa1271180:CDS
GGATTTCCTTGGGATAAGCT+TGG 0.474458 8_3:-4632262 Msa1271180:CDS
CCCATAGCCCTCATCAGATT+GGG 0.475310 8_3:+4631656 None:intergenic
AAACTATTCCATTGCAAGCA+TGG 0.484064 8_3:-4631132 Msa1271180:CDS
TCCCAATCTGATGAGGGCTA+TGG 0.486736 8_3:-4631657 Msa1271180:CDS
ACTTATAATCTGGTACTACA+TGG 0.490214 8_3:-4630715 Msa1271180:three_prime_UTR
GATTCTTGAGTATGGAGAAG+AGG 0.500875 8_3:-4631897 Msa1271180:CDS
CGAGGTTCAGATTCCATATG+TGG 0.503568 8_3:-4631181 Msa1271180:CDS
ATTTGGGAGGGTGTGTTGAA+GGG 0.510382 8_3:-4632024 Msa1271180:CDS
GAAGAACTATGCTCATGCGT+TGG 0.510932 8_3:-4631702 Msa1271180:CDS
AGCATAAGGGATGGATCTTG+TGG 0.512701 8_3:+4633033 None:intergenic
TTATGATTTGAGTGATGGTA+AGG 0.517430 8_3:-4631957 Msa1271180:CDS
AGGGTGTGTTGAAGGGAATG+TGG 0.519392 8_3:-4632017 Msa1271180:CDS
GGGAAGATAGGTGAACTCAT+TGG 0.519466 8_3:-4631935 Msa1271180:CDS
ATTTGCGGTGAAGTGCAGGC+AGG 0.520172 8_3:+4633206 None:intergenic
TAAGGTTGGTGTGATGATGT+TGG 0.525262 8_3:+4633141 None:intergenic
CACATTGGAATGGATTCTAA+AGG 0.534379 8_3:-4631740 Msa1271180:CDS
ACCCGGCTGCTCCAAAACAT+TGG 0.539925 8_3:-4631064 Msa1271180:CDS
GTTGCTTTCTGATTTGAGGT+TGG 0.540360 8_3:-4632062 Msa1271180:CDS
CGATCAGATGAATGAATGAA+AGG 0.541131 8_3:-4633240 Msa1271180:exon
AAAGAGTCATATAGATTCCA+AGG 0.543258 8_3:+4630763 None:intergenic
CAAGTTTCTTGTGGCGACAA+GGG 0.543532 8_3:+4633098 None:intergenic
TTCTTATACATTGCCAATTG+GGG 0.544657 8_3:-4630637 Msa1271180:three_prime_UTR
ATGTATAGGATAAAACTCCT+TGG 0.545418 8_3:-4630780 Msa1271180:three_prime_UTR
TCTGATCGGCAAAAGCATAA+GGG 0.549804 8_3:+4633020 None:intergenic
GACAATTATTATGGCACTGA+GGG 0.552306 8_3:-4630151 Msa1271180:three_prime_UTR
TTAAGGCAATTCATGATGCA+AGG 0.553764 8_3:-4631523 Msa1271180:CDS
GCTGTTGAAACACATTGGAA+TGG 0.554139 8_3:-4631750 Msa1271180:CDS
CGAATCTTCCCAATCTGATG+AGG 0.559311 8_3:-4631664 Msa1271180:CDS
GCAAGTTTCTTGTGGCGACA+AGG 0.559841 8_3:+4633097 None:intergenic
GTGTGCACGCACAAGTGTGT+GGG 0.566019 8_3:+4630673 None:intergenic
CATGATAAAGGTTATCAAAG+TGG 0.567037 8_3:-4631548 Msa1271180:CDS
TTTGCGGTGAAGTGCAGGCA+GGG 0.567208 8_3:+4633207 None:intergenic
TTGTAGATTCAGTGTCGAGA+AGG 0.567935 8_3:-4631849 Msa1271180:CDS
AGTGTCCCATATCCTGACAT+AGG 0.569168 8_3:+4631267 None:intergenic
AGTCGCAACCATGCTTGCAA+TGG 0.573982 8_3:+4631124 None:intergenic
GGTGTGATTTATACGGAGAG+TGG 0.575450 8_3:-4632241 Msa1271180:CDS
ATGATTTGAGTGATGGTAAG+GGG 0.577556 8_3:-4631955 Msa1271180:CDS
TGTGTGCACGCACAAGTGTG+TGG 0.578666 8_3:+4630672 None:intergenic
GACAATTATTAATGGACGGA+GGG 0.579845 8_3:+4630365 None:intergenic
TACAAAGTGTTGTCAAGTAG+TGG 0.582011 8_3:-4630438 Msa1271180:three_prime_UTR
AATATCTTAAATCACATGCA+TGG 0.582398 8_3:-4631428 Msa1271180:CDS
ATAGCTCGGTTGATTCTACA+AGG 0.584030 8_3:-4631821 Msa1271180:CDS
AATTTACTCATATTGTGAGA+CGG 0.584295 8_3:+4631497 None:intergenic
TATGATTTGAGTGATGGTAA+GGG 0.587020 8_3:-4631956 Msa1271180:CDS
AGTAGTGGCTATAGCGCAGT+GGG 0.590027 8_3:-4630501 Msa1271180:three_prime_UTR
AAGGGATGGATCTTGTGGAA+TGG 0.590760 8_3:+4633038 None:intergenic
CATGGTTGCGACTAGTGACA+AGG 0.592546 8_3:-4631114 Msa1271180:CDS
TAGATTCAGTGTCGAGAAGG+AGG 0.595864 8_3:-4631846 Msa1271180:CDS
ATCGGCAAAAGCATAAGGGA+TGG 0.596160 8_3:+4633024 None:intergenic
ATGTGACAATTATTAATGGA+CGG 0.601171 8_3:+4630361 None:intergenic
GTGACACTGCAAGTTTCTTG+TGG 0.612434 8_3:+4633089 None:intergenic
TGTAAGATAGTAATAGCCAA+AGG 0.616401 8_3:-4630741 Msa1271180:three_prime_UTR
AGTCCAATATTGTCAAGTAG+TGG 0.618749 8_3:-4630516 Msa1271180:three_prime_UTR
TTGAAGCTGTTGAAACACAT+TGG 0.621474 8_3:-4631755 Msa1271180:CDS
GAATCTTCCCAATCTGATGA+GGG 0.621938 8_3:-4631663 Msa1271180:CDS
ATCACACCAAGCTTATCCCA+AGG 0.624221 8_3:+4632256 None:intergenic
CACATATGGAATCTGAACCT+CGG 0.628454 8_3:+4631182 None:intergenic
AGATAGGTGAACTCATTGGA+AGG 0.629844 8_3:-4631931 Msa1271180:CDS
CTTATAATCTGGTACTACAT+GGG 0.638930 8_3:-4630714 Msa1271180:three_prime_UTR
AAGTCAAAACATATAAACGC+CGG 0.641278 8_3:+4631221 None:intergenic
TGTGCACGCACAAGTGTGTG+GGG 0.644919 8_3:+4630674 None:intergenic
AAAACTCAAACTCATTGATG+GGG 0.654476 8_3:+4632401 None:intergenic
GTGGTTCTGAGATAAAGGGT+AGG 0.659181 8_3:-4632201 Msa1271180:CDS
TGACAATTATTAATGGACGG+AGG 0.660040 8_3:+4630364 None:intergenic
TCGAGAAGGAGGAAATAGCT+CGG 0.662293 8_3:-4631835 Msa1271180:CDS
GAGGTTCAGATTCCATATGT+GGG 0.667584 8_3:-4631180 Msa1271180:CDS
TAGAGAACCGAATTAAGCCG+AGG 0.677310 8_3:-4631199 Msa1271180:CDS
AAGTAGTGGCTATAGCGCAG+TGG 0.685732 8_3:-4630502 Msa1271180:three_prime_UTR
ATGGTTGCGACTAGTGACAA+GGG 0.685800 8_3:-4631113 Msa1271180:CDS
TGACAATTATTATGGCACTG+AGG 0.708195 8_3:-4630152 Msa1271180:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGATTTTGTAAATCAATTT+TGG + chr8_3:4630611-4630630 None:intergenic 15.0%
!!! TATTTCTAATTACACAATTT+TGG + chr8_3:4630818-4630837 None:intergenic 15.0%
!! AAATTGTGTAATTAGAAATA+AGG - chr8_3:4630818-4630837 Msa1271180:three_prime_UTR 15.0%
!! AATTGTGTAATTAGAAATAA+GGG - chr8_3:4630819-4630838 Msa1271180:three_prime_UTR 15.0%
!!! AAAGCAAGATAAATATTTTT+AGG + chr8_3:4632499-4632518 None:intergenic 15.0%
!!! ATTTTATCCTTATAAACTAT+TGG - chr8_3:4633116-4633135 Msa1271180:CDS 15.0%
!! GTGTAAAATTAATTCCAAAA+TGG - chr8_3:4630556-4630575 Msa1271180:three_prime_UTR 20.0%
!!! ATTTTGTAAATCAATTTTGG+AGG + chr8_3:4630608-4630627 None:intergenic 20.0%
!!! AAAATTGATTTTGACATGTT+TGG - chr8_3:4630697-4630716 Msa1271180:three_prime_UTR 20.0%
!!! TTCTAGAATTAACTATCTTT+TGG - chr8_3:4630791-4630810 Msa1271180:three_prime_UTR 20.0%
!!! TAGTTATAATAATGCAGTTT+TGG + chr8_3:4630878-4630897 None:intergenic 20.0%
!! AAAACTGCATTATTATAACT+AGG - chr8_3:4630877-4630896 Msa1271180:three_prime_UTR 20.0%
!!! TTAACTTTTCCTTTTGTTTT+TGG - chr8_3:4631271-4631290 Msa1271180:CDS 20.0%
!! TTAAATTTCATGCATACTAT+TGG - chr8_3:4631919-4631938 Msa1271180:CDS 20.0%
!! CAAATTGAATTGGAAAATAA+TGG + chr8_3:4632423-4632442 None:intergenic 20.0%
!! TCATATGTGACAATTATTAA+TGG + chr8_3:4633041-4633060 None:intergenic 20.0%
!!! TTCATTCTCTTTTATTTATC+AGG + chr8_3:4633087-4633106 None:intergenic 20.0%
!! AATACAACCAATAGTTTATA+AGG + chr8_3:4633126-4633145 None:intergenic 20.0%
!!! TTTCTTTTTTGAGGAGTTTA+AGG + chr8_3:4630275-4630294 None:intergenic 25.0%
!!! TGAATTTTTGGAAATCTGAT+CGG + chr8_3:4630392-4630411 None:intergenic 25.0%
!! GAGAGAATGAAATGAATTTT+TGG + chr8_3:4630404-4630423 None:intergenic 25.0%
!!! TTCTTTTTCACCAAAAAACT+TGG - chr8_3:4630447-4630466 Msa1271180:three_prime_UTR 25.0%
!! CAAGAACTTTTCAACTTTTT+TGG + chr8_3:4630482-4630501 None:intergenic 25.0%
! AAAAAGTTGAAAAGTTCTTG+AGG - chr8_3:4630482-4630501 Msa1271180:three_prime_UTR 25.0%
!! ATTTTCTCCATTTGTATGTT+TGG - chr8_3:4630517-4630536 Msa1271180:three_prime_UTR 25.0%
! AAAAACTCAAACTCATTGAT+GGG + chr8_3:4630998-4631017 None:intergenic 25.0%
! CAAAAAAAGAACTTATCGTT+CGG + chr8_3:4631067-4631086 None:intergenic 25.0%
!! CTTTGTTTGTTGAAAAGATA+TGG - chr8_3:4631217-4631236 Msa1271180:CDS 25.0%
!! TTTTGTAATGTGCAAATTGT+TGG - chr8_3:4631241-4631260 Msa1271180:CDS 25.0%
! TTTGTAATGTGCAAATTGTT+GGG - chr8_3:4631242-4631261 Msa1271180:CDS 25.0%
!!! GTGTTTTTGGATTTTGATTT+GGG - chr8_3:4631355-4631374 Msa1271180:CDS 25.0%
! AAACATTTGATTCTTGAGTA+TGG - chr8_3:4631490-4631509 Msa1271180:CDS 25.0%
!!! ATGGTTTTTCGATAAAATCA+AGG - chr8_3:4631771-4631790 Msa1271180:CDS 25.0%
!!! TTTTTCGATAAAATCAAGGA+TGG - chr8_3:4631775-4631794 Msa1271180:CDS 25.0%
!! TTTTCGATAAAATCAAGGAT+GGG - chr8_3:4631776-4631795 Msa1271180:CDS 25.0%
! AATTTACTCATATTGTGAGA+CGG + chr8_3:4631901-4631920 None:intergenic 25.0%
!! CATGTGATTTAAGATATTCA+TGG + chr8_3:4631965-4631984 None:intergenic 25.0%
! AATATCTTAAATCACATGCA+TGG - chr8_3:4631967-4631986 Msa1271180:CDS 25.0%
! AAAGATTAATTTCCTATGTC+AGG - chr8_3:4632116-4632135 Msa1271180:CDS 25.0%
! TTTATCAAAGAGCAAAGAAT+AGG + chr8_3:4632463-4632482 None:intergenic 25.0%
! ATGTGACAATTATTAATGGA+CGG + chr8_3:4633037-4633056 None:intergenic 25.0%
!! ACCAAAAAAGAGAATCTTTT+TGG - chr8_3:4633172-4633191 Msa1271180:CDS 25.0%
!! CCAAAAAAGAGAATCTTTTT+GGG - chr8_3:4633173-4633192 Msa1271180:CDS 25.0%
!!! TTTTGGGACAAATAATCTTT+TGG - chr8_3:4633189-4633208 Msa1271180:CDS 25.0%
!!! TTTGGGACAAATAATCTTTT+GGG - chr8_3:4633190-4633209 Msa1271180:CDS 25.0%
! AGCAAATGTGACAATTATTA+TGG - chr8_3:4633235-4633254 Msa1271180:exon 25.0%
!!! TTTTTTGAGGAGTTTAAGGT+TGG + chr8_3:4630271-4630290 None:intergenic 30.0%
!! ACAAGGGATTTTCTTTTTTG+AGG + chr8_3:4630284-4630303 None:intergenic 30.0%
TCTAATCTCATTTCGAAGTT+GGG - chr8_3:4630424-4630443 Msa1271180:three_prime_UTR 30.0%
!!! GTGAAAGAATCCAAGTTTTT+TGG + chr8_3:4630460-4630479 None:intergenic 30.0%
! AACCAAGTTTCAATTTTGGA+AGG - chr8_3:4630651-4630670 Msa1271180:three_prime_UTR 30.0%
!! ACCAAGTTTCAATTTTGGAA+GGG - chr8_3:4630652-4630671 Msa1271180:three_prime_UTR 30.0%
! TACTGACAAAACAGCAATTT+TGG + chr8_3:4630847-4630866 None:intergenic 30.0%
!!! AATTGCTGTTTTGTCAGTAT+AGG - chr8_3:4630848-4630867 Msa1271180:three_prime_UTR 30.0%
!!! ATTGCTGTTTTGTCAGTATA+GGG - chr8_3:4630849-4630868 Msa1271180:three_prime_UTR 30.0%
TGATTATCTGTATTGTCAAC+AGG - chr8_3:4630966-4630985 Msa1271180:three_prime_UTR 30.0%
AAAACTCAAACTCATTGATG+GGG + chr8_3:4630997-4631016 None:intergenic 30.0%
GAAAAACTCAAACTCATTGA+TGG + chr8_3:4630999-4631018 None:intergenic 30.0%
!! GAGTTTTTCTTTGAAAGCAT+TGG - chr8_3:4631010-4631029 Msa1271180:exon 30.0%
TTTGTGAATTTGGATTTCCT+TGG - chr8_3:4631122-4631141 Msa1271180:CDS 30.0%
TTGTGAATTTGGATTTCCTT+GGG - chr8_3:4631123-4631142 Msa1271180:CDS 30.0%
!! TAAGCTTGGTGTGATTTATA+CGG - chr8_3:4631147-4631166 Msa1271180:CDS 30.0%
!! GGTTTTATGTTTAGGAAAAG+TGG - chr8_3:4631175-4631194 Msa1271180:CDS 30.0%
!! AAAAGTGGTTCTGAGATAAA+GGG - chr8_3:4631190-4631209 Msa1271180:CDS 30.0%
!!! GGTGTTTTTGGATTTTGATT+TGG - chr8_3:4631354-4631373 Msa1271180:CDS 30.0%
!!! TTTTTGGATTTTGATTTGGG+AGG - chr8_3:4631358-4631377 Msa1271180:CDS 30.0%
!!! TTTTGGATTTTGATTTGGGA+GGG - chr8_3:4631359-4631378 Msa1271180:CDS 30.0%
ATGTTTGGTATGATGTTTGT+AGG - chr8_3:4631401-4631420 Msa1271180:CDS 30.0%
! GTGTTTTATGATTTGAGTGA+TGG - chr8_3:4631433-4631452 Msa1271180:CDS 30.0%
TTATGATTTGAGTGATGGTA+AGG - chr8_3:4631438-4631457 Msa1271180:CDS 30.0%
TATGATTTGAGTGATGGTAA+GGG - chr8_3:4631439-4631458 Msa1271180:CDS 30.0%
CATGATAAAGGTTATCAAAG+TGG - chr8_3:4631847-4631866 Msa1271180:CDS 30.0%
!! AGGTTATCAAAGTGGTTTTA+AGG - chr8_3:4631855-4631874 Msa1271180:CDS 30.0%
TTTGATTGCCTTCTACATTT+AGG - chr8_3:4632015-4632034 Msa1271180:CDS 30.0%
TTGATTGCCTTCTACATTTA+GGG - chr8_3:4632016-4632035 Msa1271180:CDS 30.0%
ATTCAATCCCTAAATGTAGA+AGG + chr8_3:4632026-4632045 None:intergenic 30.0%
!!! ATCTTTTTCTCTAGAGTTTC+AGG + chr8_3:4632102-4632121 None:intergenic 30.0%
TAATTTCCTATGTCAGGATA+TGG - chr8_3:4632122-4632141 Msa1271180:CDS 30.0%
AATTTCCTATGTCAGGATAT+GGG - chr8_3:4632123-4632142 Msa1271180:CDS 30.0%
AAGTCAAAACATATAAACGC+CGG + chr8_3:4632177-4632196 None:intergenic 30.0%
! AATTGCTCAAACCAATGTTT+TGG + chr8_3:4632345-4632364 None:intergenic 30.0%
CATGAAGCTCGAAATTTATT+GGG + chr8_3:4632372-4632391 None:intergenic 30.0%
TCATGAAGCTCGAAATTTAT+TGG + chr8_3:4632373-4632392 None:intergenic 30.0%
ATGTATAGGATAAAACTCCT+TGG - chr8_3:4632615-4632634 Msa1271180:intron 30.0%
AAAGAGTCATATAGATTCCA+AGG + chr8_3:4632635-4632654 None:intergenic 30.0%
TGTAAGATAGTAATAGCCAA+AGG - chr8_3:4632654-4632673 Msa1271180:intron 30.0%
ACTTATAATCTGGTACTACA+TGG - chr8_3:4632680-4632699 Msa1271180:intron 30.0%
CTTATAATCTGGTACTACAT+GGG - chr8_3:4632681-4632700 Msa1271180:intron 30.0%
CTTCTTATACATTGCCAATT+GGG - chr8_3:4632757-4632776 Msa1271180:intron 30.0%
TTCTTATACATTGCCAATTG+GGG - chr8_3:4632758-4632777 Msa1271180:intron 30.0%
!!! CCCAAAAAGATTCTCTTTTT+TGG + chr8_3:4633176-4633195 None:intergenic 30.0%
CGATCAGATGAATGAATGAA+AGG - chr8_3:4630155-4630174 Msa1271180:three_prime_UTR 35.0%
GCAACATCACTTTCAATTTG+CGG + chr8_3:4630207-4630226 None:intergenic 35.0%
! TGGAACAGAAATGTCGTTTA+AGG + chr8_3:4630237-4630256 None:intergenic 35.0%
CTCTAATCTCATTTCGAAGT+TGG - chr8_3:4630423-4630442 Msa1271180:three_prime_UTR 35.0%
CGTGAAACCAAACATACAAA+TGG + chr8_3:4630527-4630546 None:intergenic 35.0%
! TACTAGAGAGCAATCCATTT+TGG + chr8_3:4630573-4630592 None:intergenic 35.0%
! GCAGAACCAAGTTTCAATTT+TGG - chr8_3:4630647-4630666 Msa1271180:three_prime_UTR 35.0%
AAGCTAGAATTTGTAGCTGT+TGG - chr8_3:4630767-4630786 Msa1271180:three_prime_UTR 35.0%
!!! TTGCTGTTTTGTCAGTATAG+GGG - chr8_3:4630850-4630869 Msa1271180:three_prime_UTR 35.0%
ATCAGAGAGAGTAACAAATG+AGG + chr8_3:4630950-4630969 None:intergenic 35.0%
!! GAAAAGTGGTTCTGAGATAA+AGG - chr8_3:4631189-4631208 Msa1271180:CDS 35.0%
! TTATCGATGATGAGGTTGAT+AGG - chr8_3:4631311-4631330 Msa1271180:CDS 35.0%
! ATAGGTTGCTTTCTGATTTG+AGG - chr8_3:4631329-4631348 Msa1271180:CDS 35.0%
!!! TGATTTGAGGTTGGTGTTTT+TGG - chr8_3:4631342-4631361 Msa1271180:CDS 35.0%
ATGATTTGAGTGATGGTAAG+GGG - chr8_3:4631440-4631459 Msa1271180:CDS 35.0%
! AGAAGAGGAGTTGATTGAAA+AGG - chr8_3:4631513-4631532 Msa1271180:CDS 35.0%
TTGAAGCTGTTGAAACACAT+TGG - chr8_3:4631640-4631659 Msa1271180:CDS 35.0%
! CACATTGGAATGGATTCTAA+AGG - chr8_3:4631655-4631674 Msa1271180:CDS 35.0%
TGCGTTGGGAACAATAAAAA+TGG - chr8_3:4631708-4631727 Msa1271180:CDS 35.0%
! TGGGAATCATAAGCTTTTAG+TGG - chr8_3:4631795-4631814 Msa1271180:CDS 35.0%
CCTTTATCATGCTCTTCATT+GGG + chr8_3:4631838-4631857 None:intergenic 35.0%
ACCTTTATCATGCTCTTCAT+TGG + chr8_3:4631839-4631858 None:intergenic 35.0%
TTAAGGCAATTCATGATGCA+AGG - chr8_3:4631872-4631891 Msa1271180:CDS 35.0%
!! TTCATGCATACTATTGGCTT+TGG - chr8_3:4631925-4631944 Msa1271180:CDS 35.0%
!!! GGATTTTGGCTTAGAATCTT+TGG + chr8_3:4632081-4632100 None:intergenic 35.0%
!!! TCTCTAGAGTTTCAGGATTT+TGG + chr8_3:4632095-4632114 None:intergenic 35.0%
!! AAAAGTGTCCAAAAGCTCTA+AGG + chr8_3:4632154-4632173 None:intergenic 35.0%
!! CATATGTGGGCTTTAGAAAA+GGG - chr8_3:4632228-4632247 Msa1271180:CDS 35.0%
AAACTATTCCATTGCAAGCA+TGG - chr8_3:4632263-4632282 Msa1271180:CDS 35.0%
!! CCGGGTGAATTTTAAAAACA+CGG + chr8_3:4632317-4632336 None:intergenic 35.0%
!!! CCGTGTTTTTAAAATTCACC+CGG - chr8_3:4632314-4632333 Msa1271180:CDS 35.0%
GAGATCTGTGCAAATTGAAT+TGG + chr8_3:4632433-4632452 None:intergenic 35.0%
TGAGTTCTGTCATGATGTAT+AGG - chr8_3:4632601-4632620 Msa1271180:intron 35.0%
CCAGATTATAAGTCAACCTT+TGG + chr8_3:4632673-4632692 None:intergenic 35.0%
! CCAAAGGTTGACTTATAATC+TGG - chr8_3:4632670-4632689 Msa1271180:intron 35.0%
GCTTCTTATACATTGCCAAT+TGG - chr8_3:4632756-4632775 Msa1271180:intron 35.0%
AGTCCAATATTGTCAAGTAG+TGG - chr8_3:4632879-4632898 Msa1271180:intron 35.0%
TAGCCACTACTTGACAATAT+TGG + chr8_3:4632885-4632904 None:intergenic 35.0%
!! TACAAAGTGTTGTCAAGTAG+TGG - chr8_3:4632957-4632976 Msa1271180:CDS 35.0%
! GACAATTATTAATGGACGGA+GGG + chr8_3:4633033-4633052 None:intergenic 35.0%
! TGACAATTATTAATGGACGG+AGG + chr8_3:4633034-4633053 None:intergenic 35.0%
TGACAATTATTATGGCACTG+AGG - chr8_3:4633243-4633262 Msa1271180:exon 35.0%
!! TAAGGTTGGTGTGATGATGT+TGG + chr8_3:4630257-4630276 None:intergenic 40.0%
! TCTGATCGGCAAAAGCATAA+GGG + chr8_3:4630378-4630397 None:intergenic 40.0%
! ATCTGATCGGCAAAAGCATA+AGG + chr8_3:4630379-4630398 None:intergenic 40.0%
! GTTTGGTTTCACGTTCTAGA+TGG - chr8_3:4630534-4630553 Msa1271180:three_prime_UTR 40.0%
GCCCTTCCAAAATTGAAACT+TGG + chr8_3:4630656-4630675 None:intergenic 40.0%
!!! TGCTGTTTTGTCAGTATAGG+GGG - chr8_3:4630851-4630870 Msa1271180:three_prime_UTR 40.0%
GCTTGTGTGCTTTGTGAATT+TGG - chr8_3:4631112-4631131 Msa1271180:CDS 40.0%
!!! CGGAGAGTGGTTTTATGTTT+AGG - chr8_3:4631167-4631186 Msa1271180:CDS 40.0%
! GTTGCTTTCTGATTTGAGGT+TGG - chr8_3:4631333-4631352 Msa1271180:CDS 40.0%
TTGAAGGGAATGTGGATGTT+TGG - chr8_3:4631386-4631405 Msa1271180:CDS 40.0%
AGATAGGTGAACTCATTGGA+AGG - chr8_3:4631464-4631483 Msa1271180:CDS 40.0%
GATTCTTGAGTATGGAGAAG+AGG - chr8_3:4631498-4631517 Msa1271180:CDS 40.0%
! TTGTAGATTCAGTGTCGAGA+AGG - chr8_3:4631546-4631565 Msa1271180:CDS 40.0%
! ATAGCTCGGTTGATTCTACA+AGG - chr8_3:4631574-4631593 Msa1271180:CDS 40.0%
! TCGGTTGATTCTACAAGGTT+CGG - chr8_3:4631579-4631598 Msa1271180:CDS 40.0%
GGAGTTGTTGAGTCTCAATT+TGG - chr8_3:4631600-4631619 Msa1271180:CDS 40.0%
GCTGTTGAAACACATTGGAA+TGG - chr8_3:4631645-4631664 Msa1271180:CDS 40.0%
! GGAATGGATTCTAAAGGTCT+TGG - chr8_3:4631661-4631680 Msa1271180:CDS 40.0%
AAGAACTATGCTCATGCGTT+GGG - chr8_3:4631694-4631713 Msa1271180:CDS 40.0%
GAATCTTCCCAATCTGATGA+GGG - chr8_3:4631732-4631751 Msa1271180:CDS 40.0%
! CCCAATGAAGAGCATGATAA+AGG - chr8_3:4631835-4631854 Msa1271180:CDS 40.0%
! AGAGCTTTTGGACACTTTTC+CGG - chr8_3:4632155-4632174 Msa1271180:CDS 40.0%
ATCTGAACCTCGGCTTAATT+CGG + chr8_3:4632206-4632225 None:intergenic 40.0%
CACATATGGAATCTGAACCT+CGG + chr8_3:4632216-4632235 None:intergenic 40.0%
GAGGTTCAGATTCCATATGT+GGG - chr8_3:4632215-4632234 Msa1271180:CDS 40.0%
!!! CCTTTTCTAAAGCCCACATA+TGG + chr8_3:4632230-4632249 None:intergenic 40.0%
!! CCATATGTGGGCTTTAGAAA+AGG - chr8_3:4632227-4632246 Msa1271180:CDS 40.0%
!! ACTAGTGACAAGGGTTTTGT+TGG - chr8_3:4632291-4632310 Msa1271180:CDS 40.0%
TATACATTGCCAATTGGGGT+TGG - chr8_3:4632762-4632781 Msa1271180:intron 40.0%
ATACATTGCCAATTGGGGTT+GGG - chr8_3:4632763-4632782 Msa1271180:intron 40.0%
TTCAATTTGCGGTGAAGTGC+AGG + chr8_3:4630196-4630215 None:intergenic 45.0%
CAAGTTTCTTGTGGCGACAA+GGG + chr8_3:4630300-4630319 None:intergenic 45.0%
GTGACACTGCAAGTTTCTTG+TGG + chr8_3:4630309-4630328 None:intergenic 45.0%
AAGGGATGGATCTTGTGGAA+TGG + chr8_3:4630360-4630379 None:intergenic 45.0%
AGCATAAGGGATGGATCTTG+TGG + chr8_3:4630365-4630384 None:intergenic 45.0%
! ATCGGCAAAAGCATAAGGGA+TGG + chr8_3:4630374-4630393 None:intergenic 45.0%
GGATTTCCTTGGGATAAGCT+TGG - chr8_3:4631133-4631152 Msa1271180:CDS 45.0%
ATCACACCAAGCTTATCCCA+AGG + chr8_3:4631142-4631161 None:intergenic 45.0%
GGTGTGATTTATACGGAGAG+TGG - chr8_3:4631154-4631173 Msa1271180:CDS 45.0%
!! GTGGTTCTGAGATAAAGGGT+AGG - chr8_3:4631194-4631213 Msa1271180:CDS 45.0%
!!! TCCTTTTGTTTTTGGTGCCG+AGG - chr8_3:4631279-4631298 Msa1271180:CDS 45.0%
TCCTCGGCACCAAAAACAAA+AGG + chr8_3:4631283-4631302 None:intergenic 45.0%
!!! TTTGTTTTTGGTGCCGAGGA+AGG - chr8_3:4631283-4631302 Msa1271180:CDS 45.0%
!!! TTGTTTTTGGTGCCGAGGAA+GGG - chr8_3:4631284-4631303 Msa1271180:CDS 45.0%
ATCGATAAATCCCCCTTCCT+CGG + chr8_3:4631299-4631318 None:intergenic 45.0%
AGGGGGATTTATCGATGATG+AGG - chr8_3:4631303-4631322 Msa1271180:CDS 45.0%
! ATTTGGGAGGGTGTGTTGAA+GGG - chr8_3:4631371-4631390 Msa1271180:CDS 45.0%
AGTGATGGTAAGGGGAAGAT+AGG - chr8_3:4631448-4631467 Msa1271180:CDS 45.0%
GGGAAGATAGGTGAACTCAT+TGG - chr8_3:4631460-4631479 Msa1271180:CDS 45.0%
! TAGATTCAGTGTCGAGAAGG+AGG - chr8_3:4631549-4631568 Msa1271180:CDS 45.0%
TCGAGAAGGAGGAAATAGCT+CGG - chr8_3:4631560-4631579 Msa1271180:CDS 45.0%
GAAGAACTATGCTCATGCGT+TGG - chr8_3:4631693-4631712 Msa1271180:CDS 45.0%
CGAATCTTCCCAATCTGATG+AGG - chr8_3:4631731-4631750 Msa1271180:CDS 45.0%
AGTGTCCCATATCCTGACAT+AGG + chr8_3:4632131-4632150 None:intergenic 45.0%
TAGAGAACCGAATTAAGCCG+AGG - chr8_3:4632196-4632215 Msa1271180:CDS 45.0%
CGAGGTTCAGATTCCATATG+TGG - chr8_3:4632214-4632233 Msa1271180:CDS 45.0%
ATGGTTGCGACTAGTGACAA+GGG - chr8_3:4632282-4632301 Msa1271180:CDS 45.0%
!!! AACCAATGTTTTGGAGCAGC+CGG + chr8_3:4632336-4632355 None:intergenic 45.0%
TGTCACGTTGCAGTGCTATA+GGG + chr8_3:4632992-4633011 None:intergenic 45.0%
GCAAGTTTCTTGTGGCGACA+AGG + chr8_3:4630301-4630320 None:intergenic 50.0%
!!! TGTTTTTGGTGCCGAGGAAG+GGG - chr8_3:4631285-4631304 Msa1271180:CDS 50.0%
! GATTTGGGAGGGTGTGTTGA+AGG - chr8_3:4631370-4631389 Msa1271180:CDS 50.0%
AGGGTGTGTTGAAGGGAATG+TGG - chr8_3:4631378-4631397 Msa1271180:CDS 50.0%
TCCCAATCTGATGAGGGCTA+TGG - chr8_3:4631738-4631757 Msa1271180:CDS 50.0%
CCCATAGCCCTCATCAGATT+GGG + chr8_3:4631742-4631761 None:intergenic 50.0%
CCCAATCTGATGAGGGCTAT+GGG - chr8_3:4631739-4631758 Msa1271180:CDS 50.0%
ACCCATAGCCCTCATCAGAT+TGG + chr8_3:4631743-4631762 None:intergenic 50.0%
GGGCTATGGGTTTACGTGAA+TGG - chr8_3:4631752-4631771 Msa1271180:CDS 50.0%
! GGGACACTCCTTAGAGCTTT+TGG - chr8_3:4632143-4632162 Msa1271180:CDS 50.0%
AGTCGCAACCATGCTTGCAA+TGG + chr8_3:4632274-4632293 None:intergenic 50.0%
CATGGTTGCGACTAGTGACA+AGG - chr8_3:4632281-4632300 Msa1271180:CDS 50.0%
!!! ACCAATGTTTTGGAGCAGCC+GGG + chr8_3:4632335-4632354 None:intergenic 50.0%
CCAATTGGGGTTGGGTTACA+GGG - chr8_3:4632771-4632790 Msa1271180:intron 50.0%
AAGTAGTGGCTATAGCGCAG+TGG - chr8_3:4632893-4632912 Msa1271180:intron 50.0%
AGTAGTGGCTATAGCGCAGT+GGG - chr8_3:4632894-4632913 Msa1271180:intron 50.0%
CTGTCACGTTGCAGTGCTAT+AGG + chr8_3:4632993-4633012 None:intergenic 50.0%
TTTGCGGTGAAGTGCAGGCA+GGG + chr8_3:4630191-4630210 None:intergenic 55.0%
ATTTGCGGTGAAGTGCAGGC+AGG + chr8_3:4630192-4630211 None:intergenic 55.0%
!!! GTTTTTGGTGCCGAGGAAGG+GGG - chr8_3:4631286-4631305 Msa1271180:CDS 55.0%
ACCCGGCTGCTCCAAAACAT+TGG - chr8_3:4632331-4632350 Msa1271180:CDS 55.0%
TGTGCACGCACAAGTGTGTG+GGG + chr8_3:4632724-4632743 None:intergenic 55.0%
GTGTGCACGCACAAGTGTGT+GGG + chr8_3:4632725-4632744 None:intergenic 55.0%
TGTGTGCACGCACAAGTGTG+TGG + chr8_3:4632726-4632745 None:intergenic 55.0%
GCCAATTGGGGTTGGGTTAC+AGG - chr8_3:4632770-4632789 Msa1271180:intron 55.0%
CCCTGTAACCCAACCCCAAT+TGG + chr8_3:4632774-4632793 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 4630151 4633266 4630151 ID=Msa1271180;Name=Msa1271180
chr8_3 mRNA 4630151 4633266 4630151 ID=Msa1271180-mRNA-1;Parent=Msa1271180;Name=Msa1271180-mRNA-1;_AED=0.20;_eAED=0.20;_QI=15|1|1|1|1|1|2|874|580
chr8_3 exon 4630151 4632429 4630151 ID=Msa1271180-mRNA-1:exon:1613;Parent=Msa1271180-mRNA-1
chr8_3 exon 4632914 4633266 4632914 ID=Msa1271180-mRNA-1:exon:1612;Parent=Msa1271180-mRNA-1
chr8_3 five_prime_UTR 4633252 4633266 4633252 ID=Msa1271180-mRNA-1:five_prime_utr;Parent=Msa1271180-mRNA-1
chr8_3 CDS 4632914 4633251 4632914 ID=Msa1271180-mRNA-1:cds;Parent=Msa1271180-mRNA-1
chr8_3 CDS 4631025 4632429 4631025 ID=Msa1271180-mRNA-1:cds;Parent=Msa1271180-mRNA-1
chr8_3 three_prime_UTR 4630151 4631024 4630151 ID=Msa1271180-mRNA-1:three_prime_utr;Parent=Msa1271180-mRNA-1
Gene Sequence

>Msa1271180

ATGAATGAAAGGAGAAAAGAAACCCTGCCTGCACTTCACCGCAAATTGAAAGTGATGTTGCTGAACAACCTTAAACGACATTTCTGTTCCAACATCATCACACCAACCTTAAACTCCTCAAAAAAGAAAATCCCTTGTCGCCACAAGAAACTTGCAGTGTCACATGCTCAAAAAGCACTCACTGAATATCTCCATTCCACAAGATCCATCCCTTATGCTTTTGCCGATCAGATTTCCAAAAATTCATTTCATTCTCTCTCTAATCTCATTTCGAAGTTGGGTTCTTTTTCACCAAAAAACTTGGATTCTTTCACCAAAAAAGTTGAAAAGTTCTTGAGGTACAACCCCATCAATGAGTTTGAGTTTTTCTTTGAAAGCATTGGAATTCATCATACACGTGTTTCTAGTTTGTTGCCGAACGATAAGTTCTTTTTTTGCGACGATGAATCACTTCTTGATTCTGCTTGTGTGCTTTGTGAATTTGGATTTCCTTGGGATAAGCTTGGTGTGATTTATACGGAGAGTGGTTTTATGTTTAGGAAAAGTGGTTCTGAGATAAAGGGTAGGCTTTGTTTGTTGAAAAGATATGGTTTTTGTAATGTGCAAATTGTTGGGATTTGTTTAACTTTTCCTTTTGTTTTTGGTGCCGAGGAAGGGGGATTTATCGATGATGAGGTTGATAGGTTGCTTTCTGATTTGAGGTTGGTGTTTTTGGATTTTGATTTGGGAGGGTGTGTTGAAGGGAATGTGGATGTTTGGTATGATGTTTGTAGGAAAATTAAAGTGTTTTATGATTTGAGTGATGGTAAGGGGAAGATAGGTGAACTCATTGGAAGGAATAAACATTTGATTCTTGAGTATGGAGAAGAGGAGTTGATTGAAAAGGTTGAGTTTTTTTGTAGATTCAGTGTCGAGAAGGAGGAAATAGCTCGGTTGATTCTACAAGGTTCGGAGTTGTTGAGTCTCAATTTGGAAGCGACGATTAACGTGTTGAAGCTGTTGAAACACATTGGAATGGATTCTAAAGGTCTTGGTGATGTGAAGAAGAACTATGCTCATGCGTTGGGAACAATAAAAATGGCGAATCTTCCCAATCTGATGAGGGCTATGGGTTTACGTGAATGGTTTTTCGATAAAATCAAGGATGGGAATCATAAGCTTTTAGTGGATTTTATCACAAGCTATCCCAATGAAGAGCATGATAAAGGTTATCAAAGTGGTTTTAAGGCAATTCATGATGCAAGGTTACCGTCTCACAATATGAGTAAATTAAATTTCATGCATACTATTGGCTTTGGTGAAAATGCTATAACCATGAATATCTTAAATCACATGCATGGAACAAGTGAAGAGTTACAGAAAAGATTTGATTGCCTTCTACATTTAGGGATTGAATTCTCAAAACTGTGTAAGATAATCACAAAGCTACCAAAGATTCTAAGCCAAAATCCTGAAACTCTAGAGAAAAAGATTAATTTCCTATGTCAGGATATGGGACACTCCTTAGAGCTTTTGGACACTTTTCCGGCGTTTATATGTTTTGACTTAGAGAACCGAATTAAGCCGAGGTTCAGATTCCATATGTGGGCTTTAGAAAAGGGATTGTATTCAAAAAACTATTCCATTGCAAGCATGGTTGCGACTAGTGACAAGGGTTTTGTTGGCCGTGTTTTTAAAATTCACCCGGCTGCTCCAAAACATTGGTTTGAGCAATTCTATCCCAATAAATTTCGAGCTTCATGA
Protein sequence

>Msa1271180

MNERRKETLPALHRKLKVMLLNNLKRHFCSNIITPTLNSSKKKIPCRHKKLAVSHAQKALTEYLHSTRSIPYAFADQISKNSFHSLSNLISKLGSFSPKNLDSFTKKVEKFLRYNPINEFEFFFESIGIHHTRVSSLLPNDKFFFCDDESLLDSACVLCEFGFPWDKLGVIYTESGFMFRKSGSEIKGRLCLLKRYGFCNVQIVGICLTFPFVFGAEEGGFIDDEVDRLLSDLRLVFLDFDLGGCVEGNVDVWYDVCRKIKVFYDLSDGKGKIGELIGRNKHLILEYGEEELIEKVEFFCRFSVEKEEIARLILQGSELLSLNLEATINVLKLLKHIGMDSKGLGDVKKNYAHALGTIKMANLPNLMRAMGLREWFFDKIKDGNHKLLVDFITSYPNEEHDKGYQSGFKAIHDARLPSHNMSKLNFMHTIGFGENAITMNILNHMHGTSEELQKRFDCLLHLGIEFSKLCKIITKLPKILSQNPETLEKKINFLCQDMGHSLELLDTFPAFICFDLENRIKPRFRFHMWALEKGLYSKNYSIASMVATSDKGFVGRVFKIHPAAPKHWFEQFYPNKFRAS*