AlfalfaGEDB | Msa1190140

M. sativa cultivar zhongmu-4 / Msa1190140

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003680 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005730 GO:0005737 GO:0005739 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0070013 GO:0097159 GO:0098687 GO:1901363 GO:1990837
PFAM: PF03479.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1190140	XP_003608790.1	95.862	290	12	0	32	321	43	332	1.80e-176	501

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1190140	sp\|Q8VYJ2\|AHL1_ARATH	68.266	271	69	11	61	318	89	355	2.23e-113	335

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0013810	Msa1190140	-0.817630	2.985262e-52	-8.615850e-47
Msa0065190	Msa1190140	-0.809754	1.618422e-50	-8.615850e-47
Msa0653710	Msa1190140	-0.813051	3.112341e-51	-8.615850e-47
Msa0793060	Msa1190140	-0.813043	3.124667e-51	-8.615850e-47
Msa0156780	Msa1190140	-0.809130	2.202567e-50	-8.615850e-47
Msa1046220	Msa1190140	0.805422	1.344980e-49	-8.615850e-47
Msa1069440	Msa1190140	-0.827501	1.510945e-54	-8.615850e-47
Msa1079610	Msa1190140	-0.810015	1.422356e-50	-8.615850e-47
Msa0356200	Msa1190140	0.810149	1.330484e-50	-8.615850e-47
Msa0356250	Msa1190140	0.801400	9.167304e-49	-8.615850e-47
Msa0356380	Msa1190140	0.802156	6.411889e-49	-8.615850e-47
Msa0356410	Msa1190140	0.803992	2.675273e-49	-8.615850e-47
Msa1138600	Msa1190140	-0.810144	1.333885e-50	-8.615850e-47
Msa1190090	Msa1190140	0.817380	3.398254e-52	-8.615850e-47
Msa1190140	Msa1246420	-0.811912	5.522298e-51	-8.615850e-47
Msa1190140	Msa1258020	0.829126	6.129127e-55	-8.615850e-47
Msa1190140	Msa1286660	-0.815370	9.574133e-52	-8.615850e-47
Msa1190140	Msa1401650	0.814643	1.387679e-51	-8.615850e-47
Msa1190140	Msa1448150	0.809147	2.184944e-50	-8.615850e-47
Msa0558890	Msa1190140	-0.803252	3.810063e-49	-8.615850e-47
Msa0568490	Msa1190140	-0.804797	1.818140e-49	-8.615850e-47
Msa0896920	Msa1190140	0.822837	1.912695e-53	-8.615850e-47
Msa0923910	Msa1190140	-0.812813	3.510587e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1190140	MtrunA17_Chr4g0056761	95.862	290	12	0	32	321	43	332	1.66e-180	501
Msa1190140	MtrunA17_Chr7g0245841	58.929	280	87	7	61	319	60	332	5.30e-81	249
Msa1190140	MtrunA17_Chr8g0351761	53.310	287	104	3	61	319	71	355	1.16e-73	231
Msa1190140	MtrunA17_Chr1g0188211	58.547	234	74	8	57	271	42	271	1.95e-69	219
Msa1190140	MtrunA17_Chr5g0398621	51.587	252	78	7	36	283	34	245	1.41e-65	206
Msa1190140	MtrunA17_Chr1g0179461	42.904	303	122	13	61	319	69	364	4.24e-59	194
Msa1190140	MtrunA17_Chr6g0476061	52.232	224	88	7	53	265	43	258	3.50e-56	184
Msa1190140	MtrunA17_Chr8g0349091	43.011	279	125	7	54	318	82	340	1.40e-54	181
Msa1190140	MtrunA17_Chr5g0397551	49.515	206	91	6	61	266	70	262	2.18e-51	172
Msa1190140	MtrunA17_Chr8g0386741	47.418	213	105	4	51	262	87	293	4.63e-50	169
Msa1190140	MtrunA17_Chr7g0247431	41.392	273	145	7	50	316	80	343	7.48e-46	159
Msa1190140	MtrunA17_Chr4g0054661	46.222	225	91	8	38	250	51	257	1.63e-45	157
Msa1190140	MtrunA17_Chr1g0190011	39.423	208	115	4	43	249	25	222	8.40e-34	126
Msa1190140	MtrunA17_Chr7g0274821	43.939	198	104	2	59	256	72	262	8.87e-34	127
Msa1190140	MtrunA17_Chr4g0027371	51.908	131	59	3	122	249	8	137	1.97e-33	123
Msa1190140	MtrunA17_Chr4g0027331	53.600	125	54	3	122	243	8	131	2.83e-33	119
Msa1190140	MtrunA17_Chr6g0476241	41.509	212	101	8	48	258	107	296	1.80e-31	119
Msa1190140	MtrunA17_Chr4g0027351	55.263	114	47	2	132	244	18	128	1.91e-31	115
Msa1190140	MtrunA17_Chr4g0027301	45.968	124	65	2	123	244	16	139	6.11e-26	100
Msa1190140	MtrunA17_Chr1g0165101	36.441	236	111	10	39	249	57	278	1.71e-25	104
Msa1190140	MtrunA17_Chr5g0417581	40.559	143	64	4	124	249	10	148	1.93e-23	95.5
Msa1190140	MtrunA17_Chr5g0398591	44.355	124	59	2	185	307	11	125	2.10e-23	93.2
Msa1190140	MtrunA17_Chr3g0133051	38.710	124	74	2	133	255	101	223	1.17e-19	87.4
Msa1190140	MtrunA17_Chr3g0112131	43.548	124	65	2	136	259	109	227	2.99e-19	86.7
Msa1190140	MtrunA17_Chr5g0427311	38.806	134	73	4	134	261	81	211	2.85e-18	82.4
Msa1190140	MtrunA17_Chr5g0443311	30.804	224	129	3	60	266	10	224	7.11e-17	79.0
Msa1190140	MtrunA17_Chr1g0168121	41.129	124	68	2	136	259	72	190	2.75e-16	77.8
Msa1190140	MtrunA17_Chr3g0086021	36.496	137	75	4	116	249	94	221	4.21e-16	77.4
Msa1190140	MtrunA17_Chr4g0054651	43.860	114	60	1	136	249	106	215	8.47e-16	76.6
Msa1190140	MtrunA17_Chr7g0250031	45.614	114	58	1	136	249	87	196	2.37e-15	74.7
Msa1190140	MtrunA17_Chr5g0400531	39.535	129	66	5	64	188	123	243	5.11e-15	73.6
Msa1190140	MtrunA17_Chr5g0398531	42.105	114	62	1	136	249	130	239	2.65e-14	72.4
Msa1190140	MtrunA17_Chr8g0351651	43.860	114	60	1	136	249	116	225	4.27e-14	71.6
Msa1190140	MtrunA17_Chr5g0398601	58.571	70	29	0	211	280	5	74	1.25e-13	71.2
Msa1190140	MtrunA17_Chr1g0190051	40.351	114	64	1	136	249	104	213	4.61e-13	68.6
Msa1190140	MtrunA17_Chr5g0435681	39.024	123	70	2	137	259	120	237	4.01e-12	66.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1190140	AT4G12080.1	68.266	271	69	11	61	318	89	355	2.27e-114	335
Msa1190140	AT4G22770.2	59.041	271	93	8	59	318	70	333	1.27e-86	263
Msa1190140	AT4G22770.1	59.041	271	93	8	59	318	70	333	1.27e-86	263
Msa1190140	AT4G25320.1	59.420	207	71	5	61	257	86	289	4.36e-72	229
Msa1190140	AT5G62260.1	57.604	217	76	6	59	263	74	286	1.13e-68	220
Msa1190140	AT5G62260.3	57.604	217	76	6	59	263	74	286	1.13e-68	220
Msa1190140	AT5G51590.1	55.856	222	65	5	61	252	78	296	9.95e-65	210
Msa1190140	AT5G62260.2	54.930	213	83	5	50	250	65	276	1.80e-64	205
Msa1190140	AT4G00200.2	60.280	214	58	8	61	263	56	253	3.87e-59	192
Msa1190140	AT4G00200.1	60.280	214	58	8	61	263	56	253	3.87e-59	192
Msa1190140	AT2G33620.1	54.229	201	83	5	59	258	95	287	8.43e-58	190
Msa1190140	AT2G33620.4	54.229	201	83	5	59	258	95	287	8.43e-58	190
Msa1190140	AT2G33620.2	54.229	201	83	5	59	258	95	287	8.43e-58	190
Msa1190140	AT2G33620.3	54.229	201	83	5	59	258	95	287	8.43e-58	190
Msa1190140	AT1G63470.1	52.062	194	87	4	61	252	105	294	4.76e-55	184
Msa1190140	AT2G45850.1	45.041	242	120	5	48	285	85	317	5.80e-53	177
Msa1190140	AT2G45850.2	45.041	242	120	5	48	285	85	317	5.80e-53	177
Msa1190140	AT3G61310.1	53.403	191	77	5	61	250	101	280	1.73e-50	171
Msa1190140	AT1G63480.2	47.291	203	94	4	61	263	99	288	1.14e-49	169
Msa1190140	AT1G63480.1	47.291	203	94	4	61	263	99	288	1.14e-49	169
Msa1190140	AT1G63480.5	48.276	203	92	5	61	263	93	282	1.17e-49	169
Msa1190140	AT1G63480.7	48.276	203	92	5	61	263	93	282	1.17e-49	169
Msa1190140	AT1G63480.4	48.276	203	92	5	61	263	93	282	1.17e-49	169
Msa1190140	AT1G63480.3	48.276	203	92	5	61	263	93	282	1.17e-49	169
Msa1190140	AT1G63480.6	48.276	203	92	5	61	263	93	282	1.17e-49	169
Msa1190140	AT2G45850.3	49.239	197	91	3	48	244	85	272	1.70e-49	166
Msa1190140	AT4G17950.1	43.694	222	80	8	61	250	131	339	2.94e-42	152
Msa1190140	AT5G46640.1	43.882	237	97	7	34	251	78	297	2.77e-40	145
Msa1190140	AT3G04590.1	43.750	192	98	3	59	250	103	284	4.87e-40	142
Msa1190140	AT3G04590.2	43.979	191	97	3	59	249	103	283	4.90e-39	142
Msa1190140	AT2G36560.1	42.975	121	68	1	130	249	102	222	3.13e-25	106
Msa1190140	AT3G60870.1	30.798	263	144	9	61	320	27	254	1.13e-18	84.7
Msa1190140	AT5G49700.1	36.765	136	82	3	133	264	83	218	7.61e-18	82.4
Msa1190140	AT1G14490.1	37.956	137	77	3	133	261	30	166	1.10e-16	77.8
Msa1190140	AT1G14490.2	37.956	137	77	3	133	261	49	185	1.31e-16	77.8
Msa1190140	AT2G42940.1	33.659	205	120	4	46	250	5	193	2.32e-16	77.8
Msa1190140	AT5G28590.1	41.322	121	46	3	129	249	26	121	4.91e-15	73.6
Msa1190140	AT4G14465.1	39.231	130	74	2	136	265	97	221	1.56e-14	73.2
Msa1190140	AT4G17800.1	42.982	114	61	1	136	249	112	221	2.11e-14	72.8
Msa1190140	AT3G55560.1	41.228	114	64	1	136	249	118	228	2.55e-14	72.8
Msa1190140	AT2G35270.1	38.462	130	75	2	136	265	108	232	3.98e-14	72.0
Msa1190140	AT1G76500.1	36.585	123	65	2	136	249	102	220	3.84e-13	69.3
Msa1190140	AT3G04570.1	39.344	122	62	2	136	249	110	227	4.63e-13	69.3
Msa1190140	AT4G22810.1	40.171	117	63	2	136	249	135	247	1.90e-11	64.3
Msa1190140	AT2G45430.1	41.525	118	61	3	136	249	119	232	2.74e-11	63.9

Find 102 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTCGTCAGCCCGATTCTTC+TGG	0.153062	8_1:-32999732	Msa1190140:CDS
ACATCATGTTTCTGATTTCT+TGG	0.204570	8_1:+32998890	None:intergenic
GGAGTTTGGTTGTCTGTTCT+TGG	0.245727	8_1:+33002984	None:intergenic
TTTGAAATTCTGTCTTTATC+TGG	0.274522	8_1:-32999505	Msa1190140:CDS
CTTCCTCTCTTCTTCTTCTC+TGG	0.315470	8_1:+33002852	None:intergenic
TTCGTCAGCCCGATTCTTCT+GGG	0.316075	8_1:-32999731	Msa1190140:CDS
GATATTAATGTGTCTCTTCC+TGG	0.316878	8_1:-32998728	Msa1190140:CDS
CACATAAATGCATATGTATA+AGG	0.332510	8_1:+32998685	None:intergenic
CTTCCTTCCGTGGAGATAAT+TGG	0.333200	8_1:-32998793	Msa1190140:CDS
CTGATCCAGCGGTCGGAGTT+TGG	0.334111	8_1:+33002970	None:intergenic
TCCGCAACAACCGCCGTATA+CGG	0.346397	8_1:-33002910	Msa1190140:CDS
GTTCCTCCTCCACTTTCATT+TGG	0.347793	8_1:+32999472	None:intergenic
TTCCTTTGTTTGTTGTGTTA+AGG	0.357467	8_1:-32998614	Msa1190140:three_prime_UTR
AGGCGGCATGAGTGTGTCTT+TGG	0.382271	8_1:-32999437	Msa1190140:CDS
CGGAGGAGTAGCTGGTTTGT+TGG	0.386323	8_1:-32999389	Msa1190140:CDS
AGAAAATGAAATAACCTTCA+TGG	0.401967	8_1:+32999815	None:intergenic
GAATGGGTCCCTTGCTCTGT+TGG	0.411486	8_1:-33000152	Msa1190140:CDS
GGCGGTGGTAACGGCGTCTC+CGG	0.413422	8_1:-33002889	Msa1190140:CDS
TCCTGGAGGCTAATTTCATA+AGG	0.419486	8_1:-32998711	Msa1190140:exon
TTATCCTTTGCATCCGATGC+TGG	0.421865	8_1:+32998761	None:intergenic
AAATTTGAGTTGGAAAATAT+AGG	0.440668	8_1:-33002684	Msa1190140:intron
GGAGGAACACGAAGCAGATC+AGG	0.444348	8_1:-32999457	Msa1190140:CDS
GTAAAACATGGAAAACTTGT+TGG	0.455477	8_1:+32998570	None:intergenic
GTTGTTGGCGGAGGAGTAGC+TGG	0.461135	8_1:-32999397	Msa1190140:CDS
GTATGCATTCTTTCAGCAAA+TGG	0.463040	8_1:-32999774	Msa1190140:CDS
AACGGAGCAGACGACGATAT+CGG	0.463859	8_1:+33002777	None:intergenic
TATTGGATCAAGAGTAGAGA+TGG	0.464300	8_1:+32998835	None:intergenic
TGGTGTTAGTGGTGGCGTTA+CGG	0.465659	8_1:-33003045	None:intergenic
ACTGATGATAGAATAGGTAT+TGG	0.466419	8_1:+32998818	None:intergenic
AGTCCTGATGGACGTGTTGT+TGG	0.477746	8_1:-32999412	Msa1190140:CDS
GCCGTTACCACCGCCGTATA+CGG	0.484752	8_1:+33002897	None:intergenic
TTCTTGGCTTCTGCTCATGT+TGG	0.484881	8_1:+32998906	None:intergenic
GAAGTTACTGATGATAGAAT+AGG	0.489224	8_1:+32998812	None:intergenic
CCGCCAACAACACGTCCATC+AGG	0.492937	8_1:+32999409	None:intergenic
GAGCAAAACGAAATTTGAGT+TGG	0.494483	8_1:-33002694	Msa1190140:CDS
AAATCAATCACCGGCGGCAA+CGG	0.504707	8_1:+33002759	None:intergenic
CACATCATCACTGTTAATGC+TGG	0.504861	8_1:-33000113	Msa1190140:CDS
GACAACCAAACTCCGACCGC+TGG	0.507702	8_1:-33002975	Msa1190140:CDS
GATAGAATAAATACCTGCAC+TGG	0.507918	8_1:+32999355	None:intergenic
GCAGACGACGATATCGGCTT+CGG	0.515428	8_1:+33002783	None:intergenic
TCCTTATGAAATTAGCCTCC+AGG	0.516288	8_1:+32998710	None:intergenic
ATGTTAGGATGTTACCATGA+AGG	0.517184	8_1:-32999829	Msa1190140:intron
GTCGTCTGCTCCGTTGCCGC+CGG	0.518072	8_1:-33002769	Msa1190140:CDS
GCCGCCGGTGATTGATTTCG+CGG	0.520557	8_1:-33002754	Msa1190140:CDS
AGTGGTGGCGTTACGGTGGT+CGG	0.531800	8_1:-33003038	Msa1190140:CDS
TCTGGCACCGTCGTAACTGC+CGG	0.535791	8_1:+33002870	None:intergenic
GCCGTATACGGCGGTGGTAA+CGG	0.539445	8_1:-33002898	Msa1190140:CDS
TCGTCAGCCCGATTCTTCTG+GGG	0.541650	8_1:-32999730	Msa1190140:CDS
CAGCATTAACAGTGATGATG+TGG	0.544475	8_1:+33000114	None:intergenic
AGGAGTAGCTGGTTTGTTGG+TGG	0.545177	8_1:-32999386	Msa1190140:CDS
CCTGATGGACGTGTTGTTGG+CGG	0.547329	8_1:-32999409	Msa1190140:CDS
GGTGGCTGCAAGTCCAGTGC+AGG	0.550883	8_1:-32999368	Msa1190140:intron
ATGCCAAATGAAAGTGGAGG+AGG	0.551611	8_1:-32999475	Msa1190140:CDS
GTGTCTTTGGCAAGTCCTGA+TGG	0.556787	8_1:-32999424	Msa1190140:CDS
TCGTTCATGCCAAATGAAAG+TGG	0.559940	8_1:-32999481	Msa1190140:CDS
AAATTTGAACCAACAGAGCA+AGG	0.567744	8_1:+33000143	None:intergenic
GCCGTATACGGCGGTTGTTG+CGG	0.577945	8_1:+33002909	None:intergenic
AACCTTAACACAACAAACAA+AGG	0.583283	8_1:+32998612	None:intergenic
TCCGCCGCGAAATCAATCAC+CGG	0.588488	8_1:+33002750	None:intergenic
GACACATTAATATCAGCAGC+GGG	0.589557	8_1:+32998737	None:intergenic
GACAGGAACCTGGTAAAACA+TGG	0.589646	8_1:+32998558	None:intergenic
CATCACTGTTAATGCTGGAG+AGG	0.596487	8_1:-33000108	Msa1190140:intron
AATTTGAACCAACAGAGCAA+GGG	0.597677	8_1:+33000144	None:intergenic
ACAACCGCCGTATACGGCGG+TGG	0.597858	8_1:-33002904	Msa1190140:CDS
TTGGTCTGCTGTGCCAGCAT+CGG	0.597910	8_1:-32998774	Msa1190140:CDS
GGCGTCTCCGGCAGTTACGA+CGG	0.598191	8_1:-33002877	Msa1190140:CDS
ATTCTACAATGACAGGAACC+TGG	0.603314	8_1:+32998548	None:intergenic
GATGGACGTGTTGTTGGCGG+AGG	0.605100	8_1:-32999406	Msa1190140:CDS
GTATACGGCGGTTGTTGCGG+AGG	0.606155	8_1:+33002912	None:intergenic
TGTGCCAGCATCGGATGCAA+AGG	0.609579	8_1:-32998765	Msa1190140:CDS
TCATCAGTAACTTCCTTCCG+TGG	0.610671	8_1:-32998803	Msa1190140:CDS
AGGAAAGTGAGCTAACAACT+AGG	0.613581	8_1:+32998632	None:intergenic
GAAAGAATGCATACCGCTCG+AGG	0.613852	8_1:+32999783	None:intergenic
CATGGAAAACTTGTTGGTCA+CGG	0.617686	8_1:+32998576	None:intergenic
ATTGGATCAAGAGTAGAGAT+GGG	0.619955	8_1:+32998836	None:intergenic
CCGAGAAAATATGCAGCGGA+TGG	0.621272	8_1:-33002828	Msa1190140:CDS
GGTCGGATCAGATGCTCCGT+CGG	0.623317	8_1:-33003021	Msa1190140:CDS
TGTATCTACCAGGTAGTGGT+TGG	0.624215	8_1:-32998947	Msa1190140:intron
GTGCCAGAGAAGAAGAAGAG+AGG	0.624418	8_1:-33002855	Msa1190140:CDS
AAGCTGAACGGCTGATCCAG+CGG	0.624558	8_1:+33002959	None:intergenic
TGAACGGCTGATCCAGCGGT+CGG	0.632405	8_1:+33002963	None:intergenic
AGACCAATTATCTCCACGGA+AGG	0.635192	8_1:+32998790	None:intergenic
TTCTCAGCAAGGACCTCGAG+CGG	0.641808	8_1:-32999796	Msa1190140:CDS
AGCATTAACAGTGATGATGT+GGG	0.643782	8_1:+33000115	None:intergenic
CAGCAGACCAATTATCTCCA+CGG	0.646524	8_1:+32998786	None:intergenic
AAGAAATCAGAAACATGATG+TGG	0.648967	8_1:-32998888	Msa1190140:CDS
GGAGCCACGTGGTACTCCGA+CGG	0.654960	8_1:+33003005	None:intergenic
GCAACAACCGCCGTATACGG+CGG	0.658539	8_1:-33002907	Msa1190140:CDS
AGACACATTAATATCAGCAG+CGG	0.659162	8_1:+32998736	None:intergenic
AGCGGATGGTTCAGTGACAG+CGG	0.663385	8_1:-33002814	Msa1190140:CDS
GCCGCGAAATCAATCACCGG+CGG	0.667160	8_1:+33002753	None:intergenic
GGAACACGAAGCAGATCAGG+CGG	0.674892	8_1:-32999454	Msa1190140:CDS
AACCGCCGCTAAAAGCTGAA+CGG	0.680807	8_1:+33002947	None:intergenic
ATTAATGTGTCTCTTCCTGG+AGG	0.686956	8_1:-32998725	Msa1190140:CDS
GTTACCACCGCCGTATACGG+CGG	0.693943	8_1:+33002900	None:intergenic
TGTTAGTGGTGGCGTTACGG+TGG	0.696342	8_1:-33003042	None:intergenic
GCCGGTGATTGATTTCGCGG+CGG	0.702609	8_1:-33002751	Msa1190140:CDS
AAGACCGAGAAAATATGCAG+CGG	0.716009	8_1:-33002832	Msa1190140:CDS
TTCATGCCAAATGAAAGTGG+AGG	0.721594	8_1:-32999478	Msa1190140:CDS
TGCTCCGTCGGAGTACCACG+TGG	0.724270	8_1:-33003009	Msa1190140:CDS
GCATTAACAGTGATGATGTG+GGG	0.743775	8_1:+33000116	None:intergenic
TGTCTGTTCTTGGAGCCACG+TGG	0.751370	8_1:+33002994	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TACAAAAAAAAAAAAAACTA+TGG	+	chr8_1:32999286-32999305	None:intergenic	10.0%
!!!	ATTTAATTTAATTCAATCAT+AGG	+	chr8_1:32999644-32999663	None:intergenic	10.0%
!!	AATTAAAAGTTAAACAAAAA+GGG	+	chr8_1:33000931-33000950	None:intergenic	10.0%
!!	AAATATTCAAATTCTTAATT+TGG	-	chr8_1:33001328-33001347	Msa1190140:intron	10.0%
!!	TAATAATATTCAATGTGTAT+TGG	-	chr8_1:32999801-32999820	Msa1190140:CDS	15.0%
!!	AGAATATTGAAAATTGAATT+TGG	+	chr8_1:33000191-33000210	None:intergenic	15.0%
!!!	TCTATTTTATATTTTACTGA+TGG	-	chr8_1:33000673-33000692	Msa1190140:intron	15.0%
!!	GAATTAAAAGTTAAACAAAA+AGG	+	chr8_1:33000932-33000951	None:intergenic	15.0%
!!!	TTTGTAATTCTCTAAAAATT+TGG	-	chr8_1:33001038-33001057	Msa1190140:intron	15.0%
!!!	TGTTAACATTTACATTTTTT+AGG	-	chr8_1:33001420-33001439	Msa1190140:intron	15.0%
!!!	AAATTTGAGTTGGAAAATAT+AGG	-	chr8_1:32998912-32998931	Msa1190140:CDS	20.0%
!!	GAAAGACTTAAATATTATTG+CGG	-	chr8_1:32999428-32999447	Msa1190140:CDS	20.0%
!!	AAAGACTTAAATATTATTGC+GGG	-	chr8_1:32999429-32999448	Msa1190140:CDS	20.0%
!!!	CAATTGTCAATTTTCAAAAT+TGG	-	chr8_1:33000116-33000135	Msa1190140:CDS	20.0%
!!	ACTATTTCAATATCTTAGTT+TGG	-	chr8_1:33000589-33000608	Msa1190140:intron	20.0%
!!	AAAACAATGTATGGAAAAAA+AGG	+	chr8_1:33000886-33000905	None:intergenic	20.0%
!!	AATTAACTCAAAACAATGTA+TGG	+	chr8_1:33000895-33000914	None:intergenic	20.0%
!!	ATATGTAAAAGCAGAAATTT+GGG	+	chr8_1:33000995-33001014	None:intergenic	20.0%
!!!	GCATTTAGTTTCATATTAAA+TGG	-	chr8_1:33001131-33001150	Msa1190140:intron	20.0%
!!	ACTTAAAAGATTATTCTCTT+AGG	-	chr8_1:33001267-33001286	Msa1190140:intron	20.0%
!!	ATTGAAAATGATAAAAGTCT+CGG	+	chr8_1:33001385-33001404	None:intergenic	20.0%
!!!	ATTTACATTTTTTAGGTGAA+TGG	-	chr8_1:33001427-33001446	Msa1190140:intron	20.0%
!!!	TTTACATTTTTTAGGTGAAT+GGG	-	chr8_1:33001428-33001447	Msa1190140:intron	20.0%
!!	AATGAAGTGATGATAAAATT+AGG	-	chr8_1:33001597-33001616	Msa1190140:intron	20.0%
!!	ATGAAGTGATGATAAAATTA+GGG	-	chr8_1:33001598-33001617	Msa1190140:intron	20.0%
!!!	ATTTTCGAATAAATTAGATG+CGG	-	chr8_1:33002467-33002486	Msa1190140:intron	20.0%
!	ACTTATGTTTATAGCTTATG+TGG	-	chr8_1:32999100-32999119	Msa1190140:intron	25.0%
!	ACTAAAATCTTTCCAATTCT+AGG	-	chr8_1:32999214-32999233	Msa1190140:intron	25.0%
!	TAAATGGGATACTAACTATT+TGG	-	chr8_1:32999664-32999683	Msa1190140:intron	25.0%
!	ATGGTCATATATTAGTACAT+GGG	+	chr8_1:33000220-33000239	None:intergenic	25.0%
!	AATGGTCATATATTAGTACA+TGG	+	chr8_1:33000221-33000240	None:intergenic	25.0%
!!!	CTTAGAGCAATTTTGAAAAA+AGG	+	chr8_1:33000268-33000287	None:intergenic	25.0%
!	CTTACTTAGAATTATAGAGT+TGG	+	chr8_1:33000372-33000391	None:intergenic	25.0%
!!	ACTCATTTGTTGAGAATTTA+TGG	-	chr8_1:33000471-33000490	Msa1190140:intron	25.0%
!	CGTCATTCATTGAAAATTAT+AGG	+	chr8_1:33000777-33000796	None:intergenic	25.0%
!!!	AAGCTTCTAAATTTGCTAAT+TGG	-	chr8_1:33000956-33000975	Msa1190140:intron	25.0%
!	CATATGTAAAAGCAGAAATT+TGG	+	chr8_1:33000996-33001015	None:intergenic	25.0%
!!!	ACAAAGCTAAAGTTTTAAGT+TGG	+	chr8_1:33001023-33001042	None:intergenic	25.0%
!	TCTATGCTGTCTTATATATT+AGG	-	chr8_1:33001214-33001233	Msa1190140:intron	25.0%
!!!	TTATAAGGCGTCTATAATTT+TGG	+	chr8_1:33001354-33001373	None:intergenic	25.0%
!	ATAAACAGAATAAAAGTGAG+AGG	-	chr8_1:33001628-33001647	Msa1190140:intron	25.0%
!	TAAACAGAATAAAAGTGAGA+GGG	-	chr8_1:33001629-33001648	Msa1190140:intron	25.0%
!	AGAAAATGAAATAACCTTCA+TGG	+	chr8_1:33001784-33001803	None:intergenic	25.0%
!	TATAGAAGAGAACTTTCATT+TGG	-	chr8_1:33001944-33001963	Msa1190140:intron	25.0%
!!	TTTGAAATTCTGTCTTTATC+TGG	-	chr8_1:33002091-33002110	Msa1190140:intron	25.0%
!!!	TCGAATGAACCTTTTTAATT+TGG	-	chr8_1:33002328-33002347	Msa1190140:intron	25.0%
!	TGAATCACACCAAATTAAAA+AGG	+	chr8_1:33002340-33002359	None:intergenic	25.0%
!	TAAGAGTTATCTTTCTCAAA+TGG	+	chr8_1:33002435-33002454	None:intergenic	25.0%
!!	AAATGTTTGTTTGCTAGAAA+TGG	+	chr8_1:33002533-33002552	None:intergenic	25.0%
!	CACATAAATGCATATGTATA+AGG	+	chr8_1:33002914-33002933	None:intergenic	25.0%
!	AGTGTGAAATGTTACTGTTT+TGG	-	chr8_1:32999008-32999027	Msa1190140:intron	30.0%
!!!	CAAACATTAAGTCACTTTTG+AGG	+	chr8_1:32999192-32999211	None:intergenic	30.0%
	CTCAAAAGTGACTTAATGTT+TGG	-	chr8_1:32999190-32999209	Msa1190140:intron	30.0%
	TCGAACATAATACCTAGAAT+TGG	+	chr8_1:32999229-32999248	None:intergenic	30.0%
	ATACGGTATGTTTGAATTGA+CGG	+	chr8_1:32999353-32999372	None:intergenic	30.0%
	ATTCAAACATACCGTATGTT+AGG	-	chr8_1:32999356-32999375	Msa1190140:intron	30.0%
!!	CATATTTCTAGCCTAACATA+CGG	+	chr8_1:32999370-32999389	None:intergenic	30.0%
!	AGTTAGTTGATACTGTTAAG+TGG	-	chr8_1:32999539-32999558	Msa1190140:intron	30.0%
	ATCATTATGCTTACACTTTG+CGG	+	chr8_1:32999690-32999709	None:intergenic	30.0%
	TAGGCAATTGCAAATTTCTT+GGG	+	chr8_1:32999747-32999766	None:intergenic	30.0%
	TTAGGCAATTGCAAATTTCT+TGG	+	chr8_1:32999748-32999767	None:intergenic	30.0%
	AAAACAACTCTATGAAGCTT+AGG	+	chr8_1:32999766-32999785	None:intergenic	30.0%
	AAAGGAGATAGTAGCAATTA+AGG	+	chr8_1:33000025-33000044	None:intergenic	30.0%
	AAGAGAGAGGATGTAATTAA+AGG	+	chr8_1:33000043-33000062	None:intergenic	30.0%
	GTATCAATTAAAGAAGAGAG+AGG	+	chr8_1:33000056-33000075	None:intergenic	30.0%
	TGTGTATCTATACAATTCCA+CGG	-	chr8_1:33000089-33000108	Msa1190140:intron	30.0%
!	AAATTGACAATTGATAACCG+TGG	+	chr8_1:33000109-33000128	None:intergenic	30.0%
	TGGTTAACGTGAAATTGAAT+GGG	+	chr8_1:33000171-33000190	None:intergenic	30.0%
	TTGGTTAACGTGAAATTGAA+TGG	+	chr8_1:33000172-33000191	None:intergenic	30.0%
	AAAAAAGGAGTTGAGAAAAG+TGG	+	chr8_1:33000253-33000272	None:intergenic	30.0%
	TAGTAAGAACTTACTGACAT+AGG	+	chr8_1:33000441-33000460	None:intergenic	30.0%
!!	TCAGTGCACAGTTTTTAAAA+TGG	+	chr8_1:33000627-33000646	None:intergenic	30.0%
	TATCTTATATCAGGTAGTCA+AGG	+	chr8_1:33001161-33001180	None:intergenic	30.0%
	GAGGGTAAATATCTTATATC+AGG	+	chr8_1:33001170-33001189	None:intergenic	30.0%
!	TGATATAAAGCATCTTGAGA+TGG	-	chr8_1:33001244-33001263	Msa1190140:intron	30.0%
	TATGCTGTAATCCTGTTATT+TGG	-	chr8_1:33001535-33001554	Msa1190140:intron	30.0%
!	ATGCTGTAATCCTGTTATTT+GGG	-	chr8_1:33001536-33001555	Msa1190140:intron	30.0%
!	TTTTCAATTCCCCAAATAAC+AGG	+	chr8_1:33001549-33001568	None:intergenic	30.0%
!!!	ACTTCTTTTTCAGTGATAAC+TGG	-	chr8_1:33001699-33001718	Msa1190140:intron	30.0%
!	TGTCAACAATTTTGTGTGTA+TGG	-	chr8_1:33001742-33001761	Msa1190140:intron	30.0%
	TTTGTGTGTATGGTTATGTT+AGG	-	chr8_1:33001752-33001771	Msa1190140:intron	30.0%
!!	GTTATTTCATTTTCTCAGCA+AGG	-	chr8_1:33001789-33001808	Msa1190140:intron	30.0%
	GAAAGTTCTCTTCTATAAGA+TGG	+	chr8_1:33001941-33001960	None:intergenic	30.0%
	GTAGATCATTAAATGCATTG+TGG	+	chr8_1:33001972-33001991	None:intergenic	30.0%
	AGGTATTTATTCTATCCGTA+AGG	-	chr8_1:33002248-33002267	Msa1190140:intron	30.0%
	GGTATTTATTCTATCCGTAA+GGG	-	chr8_1:33002249-33002268	Msa1190140:intron	30.0%
	ATTTGCAAAATTCTCCCTTA+CGG	+	chr8_1:33002266-33002285	None:intergenic	30.0%
!!	TTAATTTGGTGTGATTCAAG+TGG	-	chr8_1:33002342-33002361	Msa1190140:intron	30.0%
	CTAGCAAACAAACATTTCAA+TGG	-	chr8_1:33002536-33002555	Msa1190140:intron	30.0%
	ATTTCAAACATGTATCTACC+AGG	-	chr8_1:33002639-33002658	Msa1190140:intron	30.0%
!	ACATCATGTTTCTGATTTCT+TGG	+	chr8_1:33002709-33002728	None:intergenic	30.0%
	AAGAAATCAGAAACATGATG+TGG	-	chr8_1:33002708-33002727	Msa1190140:CDS	30.0%
	ACTGATGATAGAATAGGTAT+TGG	+	chr8_1:33002781-33002800	None:intergenic	30.0%
	GAAGTTACTGATGATAGAAT+AGG	+	chr8_1:33002787-33002806	None:intergenic	30.0%
!	TGCTTTTACAATGCTGTAAT+GGG	-	chr8_1:33002938-33002957	Msa1190140:intron	30.0%
!!	TTCCTTTGTTTGTTGTGTTA+AGG	-	chr8_1:33002982-33003001	Msa1190140:CDS	30.0%
	AACCTTAACACAACAAACAA+AGG	+	chr8_1:33002987-33003006	None:intergenic	30.0%
	GTAAAACATGGAAAACTTGT+TGG	+	chr8_1:33003029-33003048	None:intergenic	30.0%
	GAGCAAAACGAAATTTGAGT+TGG	-	chr8_1:32998902-32998921	Msa1190140:CDS	35.0%
	GCAACTGATGTTTAACACTT+TGG	-	chr8_1:32999389-32999408	Msa1190140:CDS	35.0%
!	GTTGACATATGTTCCTCTTT+TGG	-	chr8_1:32999476-32999495	Msa1190140:CDS	35.0%
	TATCAGCAAGTAAGCTGTAA+TGG	+	chr8_1:32999574-32999593	None:intergenic	35.0%
!	TTACAGCTTACTTGCTGATA+TGG	-	chr8_1:32999574-32999593	Msa1190140:intron	35.0%
	TGTAAGCATAATGATGAAGC+TGG	-	chr8_1:32999695-32999714	Msa1190140:intron	35.0%
!!!	GTTGTTTTTCGTGTATGAGA+TGG	-	chr8_1:32999778-32999797	Msa1190140:CDS	35.0%
	TAGTAGTAATCTCAGAAGCA+CGG	-	chr8_1:32999858-32999877	Msa1190140:intron	35.0%
	GTCAATTCATCTCATGTGTT+CGG	-	chr8_1:32999968-32999987	Msa1190140:intron	35.0%
!!	CAAATTGGTAATGGGATCAT+TGG	+	chr8_1:33000148-33000167	None:intergenic	35.0%
!	TGAATGGGCAAATTGGTAAT+GGG	+	chr8_1:33000156-33000175	None:intergenic	35.0%
	TTGAATGGGCAAATTGGTAA+TGG	+	chr8_1:33000157-33000176	None:intergenic	35.0%
	GTGAAATTGAATGGGCAAAT+TGG	+	chr8_1:33000163-33000182	None:intergenic	35.0%
	ACTGCACTACAATTATCAAG+AGG	-	chr8_1:33000290-33000309	Msa1190140:intron	35.0%
!!!	TTCTGACATTGTGTTGCTTT+TGG	+	chr8_1:33000336-33000355	None:intergenic	35.0%
!	AAGATGATAATGCTCCTCTT+TGG	-	chr8_1:33000414-33000433	Msa1190140:intron	35.0%
!	AGATGATAATGCTCCTCTTT+GGG	-	chr8_1:33000415-33000434	Msa1190140:intron	35.0%
	ATTAAGACGCACAGAAGTTT+CGG	+	chr8_1:33000499-33000518	None:intergenic	35.0%
	AAAAACTGTGCACTGAGATT+TGG	-	chr8_1:33000631-33000650	Msa1190140:intron	35.0%
	GATACAATACACATCCGATA+CGG	+	chr8_1:33000805-33000824	None:intergenic	35.0%
	GTTTCTTGTCTGTGATTCAT+AGG	-	chr8_1:33000833-33000852	Msa1190140:intron	35.0%
	AATTTGAACCAACAGAGCAA+GGG	+	chr8_1:33001455-33001474	None:intergenic	35.0%
	AAATTTGAACCAACAGAGCA+AGG	+	chr8_1:33001456-33001475	None:intergenic	35.0%
!	AGCATTAACAGTGATGATGT+GGG	+	chr8_1:33001484-33001503	None:intergenic	35.0%
!	TGCTGTAATCCTGTTATTTG+GGG	-	chr8_1:33001537-33001556	Msa1190140:intron	35.0%
	ATGTTAGGATGTTACCATGA+AGG	-	chr8_1:33001767-33001786	Msa1190140:intron	35.0%
	GTATGCATTCTTTCAGCAAA+TGG	-	chr8_1:33001822-33001841	Msa1190140:intron	35.0%
!!	ATGCCTTTTTGAGCATATAG+TGG	-	chr8_1:33002015-33002034	Msa1190140:intron	35.0%
!!	TGCCTTTTTGAGCATATAGT+GGG	-	chr8_1:33002016-33002035	Msa1190140:intron	35.0%
	ATCCCACTATATGCTCAAAA+AGG	+	chr8_1:33002021-33002040	None:intergenic	35.0%
!!	TTTTGAGCATATAGTGGGAT+TGG	-	chr8_1:33002021-33002040	Msa1190140:intron	35.0%
	GATAGAATAAATACCTGCAC+TGG	+	chr8_1:33002244-33002263	None:intergenic	35.0%
	GAAATGGAGTTGTCATTGTA+AGG	+	chr8_1:33002517-33002536	None:intergenic	35.0%
	TTATAGCAACATGCATAAGC+TGG	-	chr8_1:33002567-33002586	Msa1190140:intron	35.0%
	GCTGGTGATTTAGTATTTAC+TGG	-	chr8_1:33002585-33002604	Msa1190140:intron	35.0%
	ATTGGATCAAGAGTAGAGAT+GGG	+	chr8_1:33002763-33002782	None:intergenic	35.0%
	TATTGGATCAAGAGTAGAGA+TGG	+	chr8_1:33002764-33002783	None:intergenic	35.0%
	AGACACATTAATATCAGCAG+CGG	+	chr8_1:33002863-33002882	None:intergenic	35.0%
	GATATTAATGTGTCTCTTCC+TGG	-	chr8_1:33002868-33002887	Msa1190140:CDS	35.0%
!!	CTGCTTTTACAATGCTGTAA+TGG	-	chr8_1:33002937-33002956	Msa1190140:intron	35.0%
!	CAAGTTTTCCATGTTTTACC+AGG	-	chr8_1:33003030-33003049	Msa1190140:CDS	35.0%
	AAGACCGAGAAAATATGCAG+CGG	-	chr8_1:32998764-32998783	Msa1190140:CDS	40.0%
!	TTTTGGATTGTGTTGTGCTG+TGG	-	chr8_1:32999025-32999044	Msa1190140:intron	40.0%
	AGTGAGTTCAGATTCAGATG+TGG	-	chr8_1:32999124-32999143	Msa1190140:intron	40.0%
	GTGAGTTCAGATTCAGATGT+GGG	-	chr8_1:32999125-32999144	Msa1190140:intron	40.0%
	AGAGTAGACCACAACTATTG+AGG	+	chr8_1:32999152-32999171	None:intergenic	40.0%
!!	GGTCTACTCTTGATAATGTG+AGG	-	chr8_1:32999162-32999181	Msa1190140:intron	40.0%
	CGCTGAGTTTGACTAAATCA+CGG	-	chr8_1:32999255-32999274	Msa1190140:intron	40.0%
!!	GTTCCTCTTTTGGTCTTTTG+TGG	-	chr8_1:32999486-32999505	Msa1190140:CDS	40.0%
	TGACCACAAAAGACCAAAAG+AGG	+	chr8_1:32999492-32999511	None:intergenic	40.0%
	GAGATGAATTGACTGTATCG+CGG	+	chr8_1:32999961-32999980	None:intergenic	40.0%
	GATAGTAGCAATTAAGGAGG+AGG	+	chr8_1:33000019-33000038	None:intergenic	40.0%
	GGAGATAGTAGCAATTAAGG+AGG	+	chr8_1:33000022-33000041	None:intergenic	40.0%
	AAGGAGTTGAGAAAAGTGGT+AGG	+	chr8_1:33000249-33000268	None:intergenic	40.0%
	GTCTCGGCGTTTCAATTATA+AGG	+	chr8_1:33001369-33001388	None:intergenic	40.0%
!	GCATTAACAGTGATGATGTG+GGG	+	chr8_1:33001483-33001502	None:intergenic	40.0%
!	CAGCATTAACAGTGATGATG+TGG	+	chr8_1:33001485-33001504	None:intergenic	40.0%
	CACATCATCACTGTTAATGC+TGG	-	chr8_1:33001483-33001502	Msa1190140:intron	40.0%
	AGTGATCACACAGATATGAC+AGG	+	chr8_1:33001678-33001697	None:intergenic	40.0%
!!	ACTTATCTCGGTGTTTCTAC+AGG	-	chr8_1:33002063-33002082	Msa1190140:intron	40.0%
!!	CTTATCTCGGTGTTTCTACA+GGG	-	chr8_1:33002064-33002083	Msa1190140:intron	40.0%
	TCGTTCATGCCAAATGAAAG+TGG	-	chr8_1:33002115-33002134	Msa1190140:intron	40.0%
	TTCATGCCAAATGAAAGTGG+AGG	-	chr8_1:33002118-33002137	Msa1190140:intron	40.0%
!	TTTGGTGTGATTCAAGTGGT+CGG	-	chr8_1:33002346-33002365	Msa1190140:intron	40.0%
	GTTTGAGTCTCTTAAGCATG+TGG	-	chr8_1:33002371-33002390	Msa1190140:intron	40.0%
	AACATGTATCTACCAGGTAG+TGG	-	chr8_1:33002645-33002664	Msa1190140:intron	40.0%
	TAAAACTACCAACCACTACC+TGG	+	chr8_1:33002660-33002679	None:intergenic	40.0%
!!!	GGTAGTGGTTGGTAGTTTTA+TGG	-	chr8_1:33002660-33002679	Msa1190140:intron	40.0%
	GACACATTAATATCAGCAGC+GGG	+	chr8_1:33002862-33002881	None:intergenic	40.0%
	ATTAATGTGTCTCTTCCTGG+AGG	-	chr8_1:33002871-33002890	Msa1190140:CDS	40.0%
	TCCTGGAGGCTAATTTCATA+AGG	-	chr8_1:33002885-33002904	Msa1190140:CDS	40.0%
!	TCCTTATGAAATTAGCCTCC+AGG	+	chr8_1:33002889-33002908	None:intergenic	40.0%
	AGGAAAGTGAGCTAACAACT+AGG	+	chr8_1:33002967-33002986	None:intergenic	40.0%
!!	CATGGAAAACTTGTTGGTCA+CGG	+	chr8_1:33003023-33003042	None:intergenic	40.0%
	GGAGTTTGGTTGTCTGTTCT+TGG	+	chr8_1:32998615-32998634	None:intergenic	45.0%
!	ATCAGCCGTTCAGCTTTTAG+CGG	-	chr8_1:32998644-32998663	Msa1190140:three_prime_UTR	45.0%
	CTTCCTCTCTTCTTCTTCTC+TGG	+	chr8_1:32998747-32998766	None:intergenic	45.0%
!	CCATCCGCTGCATATTTTCT+CGG	+	chr8_1:32998771-32998790	None:intergenic	45.0%
!	GTTTTGCTCACAGAGCTAAC+TGG	+	chr8_1:32998891-32998910	None:intergenic	45.0%
	ATGTGGGACCTCAATAGTTG+TGG	-	chr8_1:32999141-32999160	Msa1190140:intron	45.0%
	GAAGCACGGATACACTAAAG+TGG	-	chr8_1:32999872-32999891	Msa1190140:intron	45.0%
	ATACACTAAAGTGGCTTCCG+AGG	-	chr8_1:32999881-32999900	Msa1190140:intron	45.0%
	ACCGTGATGCTGATATACCT+CGG	-	chr8_1:32999929-32999948	Msa1190140:intron	45.0%
	TCCGAGGTATATCAGCATCA+CGG	+	chr8_1:32999933-32999952	None:intergenic	45.0%
	GAAAAGTGGTAGGAGGTCAA+TGG	+	chr8_1:33000239-33000258	None:intergenic	45.0%
	GAGTTGAGAAAAGTGGTAGG+AGG	+	chr8_1:33000246-33000265	None:intergenic	45.0%
	TTACTGACATAGGCCCAAAG+AGG	+	chr8_1:33000431-33000450	None:intergenic	45.0%
	CTGAGTTGCATGCAATCTAC+CGG	-	chr8_1:33000538-33000557	Msa1190140:intron	45.0%
	TGAATGACGAATCGCCGTAT+CGG	-	chr8_1:33000788-33000807	Msa1190140:intron	45.0%
	CATCACTGTTAATGCTGGAG+AGG	-	chr8_1:33001488-33001507	Msa1190140:intron	45.0%
	GCACGCACAGTTACTTATCT+CGG	-	chr8_1:33002051-33002070	Msa1190140:intron	45.0%
	ATGCCAAATGAAAGTGGAGG+AGG	-	chr8_1:33002121-33002140	Msa1190140:intron	45.0%
	GTTCCTCCTCCACTTTCATT+TGG	+	chr8_1:33002127-33002146	None:intergenic	45.0%
	GTCTCTTAAGCATGTGGTCA+TGG	-	chr8_1:33002377-33002396	Msa1190140:intron	45.0%
!	TGTATCTACCAGGTAGTGGT+TGG	-	chr8_1:33002649-33002668	Msa1190140:intron	45.0%
!!!	GTGGTTGGTAGTTTTATGGC+AGG	-	chr8_1:33002664-33002683	Msa1190140:intron	45.0%
	TTCTTGGCTTCTGCTCATGT+TGG	+	chr8_1:33002693-33002712	None:intergenic	45.0%
	TCATCAGTAACTTCCTTCCG+TGG	-	chr8_1:33002793-33002812	Msa1190140:CDS	45.0%
	CTTCCTTCCGTGGAGATAAT+TGG	-	chr8_1:33002803-33002822	Msa1190140:CDS	45.0%
	AGACCAATTATCTCCACGGA+AGG	+	chr8_1:33002809-33002828	None:intergenic	45.0%
	CAGCAGACCAATTATCTCCA+CGG	+	chr8_1:33002813-33002832	None:intergenic	45.0%
	TTATCCTTTGCATCCGATGC+TGG	+	chr8_1:33002838-33002857	None:intergenic	45.0%
!!	TTGAATTAAATTAAATTAAA+TGG	-	chr8_1:32999648-32999667	Msa1190140:intron	5.0%
!!	TGAATTAAATTAAATTAAAT+GGG	-	chr8_1:32999649-32999668	Msa1190140:intron	5.0%
	AACCGCCGCTAAAAGCTGAA+CGG	+	chr8_1:32998652-32998671	None:intergenic	50.0%
	GTGCCAGAGAAGAAGAAGAG+AGG	-	chr8_1:32998741-32998760	Msa1190140:CDS	50.0%
	CCGAGAAAATATGCAGCGGA+TGG	-	chr8_1:32998768-32998787	Msa1190140:CDS	50.0%
	AACGGAGCAGACGACGATAT+CGG	+	chr8_1:32998822-32998841	None:intergenic	50.0%
	AAATCAATCACCGGCGGCAA+CGG	+	chr8_1:32998840-32998859	None:intergenic	50.0%
	GTGTTGTGCTGTGGTGTGTT+TGG	-	chr8_1:32999034-32999053	Msa1190140:intron	50.0%
	GGGCTGTGTATTGTGTCAAG+AGG	-	chr8_1:32999449-32999468	Msa1190140:CDS	50.0%
	TCACGGTCAGCACATATCAG+CGG	+	chr8_1:32999916-32999935	None:intergenic	50.0%
!	CTGTATCGCGGTATTTTCCG+AGG	+	chr8_1:32999949-32999968	None:intergenic	50.0%
	TGCATGCAATCTACCGGTGT+TGG	-	chr8_1:33000544-33000563	Msa1190140:intron	50.0%
!!	CAATCTACCGGTGTTGGTGA+AGG	-	chr8_1:33000550-33000569	Msa1190140:intron	50.0%
	ATCTCCTCCTTCACCAACAC+CGG	+	chr8_1:33000560-33000579	None:intergenic	50.0%
	AGTGCAGCAGCAATCTGAGA+GGG	+	chr8_1:33001188-33001207	None:intergenic	50.0%
	GAAAGAATGCATACCGCTCG+AGG	+	chr8_1:33001816-33001835	None:intergenic	50.0%
	TTCGTCAGCCCGATTCTTCT+GGG	-	chr8_1:33001865-33001884	Msa1190140:intron	50.0%
	AATGTGCCCCCAGAAGAATC+GGG	+	chr8_1:33001876-33001895	None:intergenic	50.0%
	CAATGTGCCCCCAGAAGAAT+CGG	+	chr8_1:33001877-33001896	None:intergenic	50.0%
!	TGGGGGCACATTGACATATG+AGG	-	chr8_1:33001884-33001903	Msa1190140:intron	50.0%
	GTGTCTTTGGCAAGTCCTGA+TGG	-	chr8_1:33002172-33002191	Msa1190140:intron	50.0%
!	AGTCCTGATGGACGTGTTGT+TGG	-	chr8_1:33002184-33002203	Msa1190140:intron	50.0%
!!	AGGAGTAGCTGGTTTGTTGG+TGG	-	chr8_1:33002210-33002229	Msa1190140:intron	50.0%
	TGTCTGTTCTTGGAGCCACG+TGG	+	chr8_1:32998605-32998624	None:intergenic	55.0%
	AAGCTGAACGGCTGATCCAG+CGG	+	chr8_1:32998640-32998659	None:intergenic	55.0%
!	AGCCGTTCAGCTTTTAGCGG+CGG	-	chr8_1:32998647-32998666	Msa1190140:three_prime_UTR	55.0%
!	CTTTTAGCGGCGGTTCAAGC+AGG	-	chr8_1:32998657-32998676	Msa1190140:three_prime_UTR	55.0%
	TCCGCAACAACCGCCGTATA+CGG	-	chr8_1:32998686-32998705	Msa1190140:three_prime_UTR	55.0%
	AGCGGATGGTTCAGTGACAG+CGG	-	chr8_1:32998782-32998801	Msa1190140:CDS	55.0%
!!	GCAGACGACGATATCGGCTT+CGG	+	chr8_1:32998816-32998835	None:intergenic	55.0%
	TCCGCCGCGAAATCAATCAC+CGG	+	chr8_1:32998849-32998868	None:intergenic	55.0%
	AAGTGGCTTCCGAGGCGTAT+CGG	-	chr8_1:32999889-32999908	Msa1190140:intron	55.0%
!!	TCTACCGGTGTTGGTGAAGG+AGG	-	chr8_1:33000553-33000572	Msa1190140:intron	55.0%
	CAGTGCAGCAGCAATCTGAG+AGG	+	chr8_1:33001189-33001208	None:intergenic	55.0%
	GAATGGGTCCCTTGCTCTGT+TGG	-	chr8_1:33001444-33001463	Msa1190140:intron	55.0%
	TTCTCAGCAAGGACCTCGAG+CGG	-	chr8_1:33001800-33001819	Msa1190140:intron	55.0%
	CTTCGTCAGCCCGATTCTTC+TGG	-	chr8_1:33001864-33001883	Msa1190140:intron	55.0%
	TCGTCAGCCCGATTCTTCTG+GGG	-	chr8_1:33001866-33001885	Msa1190140:intron	55.0%
	GGAGGAACACGAAGCAGATC+AGG	-	chr8_1:33002139-33002158	Msa1190140:intron	55.0%
	GGAACACGAAGCAGATCAGG+CGG	-	chr8_1:33002142-33002161	Msa1190140:intron	55.0%
	AGGCGGCATGAGTGTGTCTT+TGG	-	chr8_1:33002159-33002178	Msa1190140:intron	55.0%
!	CCTGATGGACGTGTTGTTGG+CGG	-	chr8_1:33002187-33002206	Msa1190140:intron	55.0%
!!	CGGAGGAGTAGCTGGTTTGT+TGG	-	chr8_1:33002207-33002226	Msa1190140:intron	55.0%
	GGTGTGATTCAAGTGGTCGG+TGG	-	chr8_1:33002349-33002368	Msa1190140:intron	55.0%
	TTGGTCTGCTGTGCCAGCAT+CGG	-	chr8_1:33002822-33002841	Msa1190140:CDS	55.0%
!	TGTGCCAGCATCGGATGCAA+AGG	-	chr8_1:33002831-33002850	Msa1190140:CDS	55.0%
	GGTCGGATCAGATGCTCCGT+CGG	-	chr8_1:32998575-32998594	Msa1190140:three_prime_UTR	60.0%
	GACAACCAAACTCCGACCGC+TGG	-	chr8_1:32998621-32998640	Msa1190140:three_prime_UTR	60.0%
	CTGATCCAGCGGTCGGAGTT+TGG	+	chr8_1:32998629-32998648	None:intergenic	60.0%
	TGAACGGCTGATCCAGCGGT+CGG	+	chr8_1:32998636-32998655	None:intergenic	60.0%
	GTATACGGCGGTTGTTGCGG+AGG	+	chr8_1:32998687-32998706	None:intergenic	60.0%
	GCCGTATACGGCGGTTGTTG+CGG	+	chr8_1:32998690-32998709	None:intergenic	60.0%
	GCAACAACCGCCGTATACGG+CGG	-	chr8_1:32998689-32998708	Msa1190140:three_prime_UTR	60.0%
	GTTACCACCGCCGTATACGG+CGG	+	chr8_1:32998699-32998718	None:intergenic	60.0%
	GCCGTATACGGCGGTGGTAA+CGG	-	chr8_1:32998698-32998717	Msa1190140:three_prime_UTR	60.0%
	GCCGTTACCACCGCCGTATA+CGG	+	chr8_1:32998702-32998721	None:intergenic	60.0%
	TCTGGCACCGTCGTAACTGC+CGG	+	chr8_1:32998729-32998748	None:intergenic	60.0%
!	GCCGCCGGTGATTGATTTCG+CGG	-	chr8_1:32998842-32998861	Msa1190140:CDS	60.0%
	GCCGCGAAATCAATCACCGG+CGG	+	chr8_1:32998846-32998865	None:intergenic	60.0%
!	GCCGGTGATTGATTTCGCGG+CGG	-	chr8_1:32998845-32998864	Msa1190140:CDS	60.0%
	AGTGGCTTCCGAGGCGTATC+GGG	-	chr8_1:32999890-32999909	Msa1190140:intron	60.0%
	CGTCAGCCCGATTCTTCTGG+GGG	-	chr8_1:33001867-33001886	Msa1190140:intron	60.0%
	CCGCCAACAACACGTCCATC+AGG	+	chr8_1:33002190-33002209	None:intergenic	60.0%
!	GATGGACGTGTTGTTGGCGG+AGG	-	chr8_1:33002190-33002209	Msa1190140:intron	60.0%
	GTTGTTGGCGGAGGAGTAGC+TGG	-	chr8_1:33002199-33002218	Msa1190140:intron	60.0%
!	TGCTCCGTCGGAGTACCACG+TGG	-	chr8_1:32998587-32998606	Msa1190140:three_prime_UTR	65.0%
	GGAGCCACGTGGTACTCCGA+CGG	+	chr8_1:32998594-32998613	None:intergenic	65.0%
	ACAACCGCCGTATACGGCGG+TGG	-	chr8_1:32998692-32998711	Msa1190140:three_prime_UTR	65.0%
	GGCGTCTCCGGCAGTTACGA+CGG	-	chr8_1:32998719-32998738	Msa1190140:exon	65.0%
	ATCAGCGGCCCGATACGCCT+CGG	+	chr8_1:32999901-32999920	None:intergenic	65.0%
	GGTGGCTGCAAGTCCAGTGC+AGG	-	chr8_1:33002228-33002247	Msa1190140:intron	65.0%
!!	GGCGGTGGTAACGGCGTCTC+CGG	-	chr8_1:32998707-32998726	Msa1190140:exon	70.0%
	GTCGTCTGCTCCGTTGCCGC+CGG	-	chr8_1:32998827-32998846	Msa1190140:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr8_1	gene	32998560	33003058	32998560	ID=Msa1190140;Name=Msa1190140
chr8_1	mRNA	32998560	33003058	32998560	ID=Msa1190140-mRNA-1;Parent=Msa1190140;Name=Msa1190140-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0\|0.8\|0.66\|1\|0.6\|0.66\|6\|161\|321
chr8_1	exon	32998560	32998957	32998560	ID=Msa1190140-mRNA-1:exon:11148;Parent=Msa1190140-mRNA-1
chr8_1	exon	32999369	32999533	32999369	ID=Msa1190140-mRNA-1:exon:11147;Parent=Msa1190140-mRNA-1
chr8_1	exon	32999713	32999844	32999713	ID=Msa1190140-mRNA-1:exon:11146;Parent=Msa1190140-mRNA-1
chr8_1	exon	33000109	33000176	33000109	ID=Msa1190140-mRNA-1:exon:11145;Parent=Msa1190140-mRNA-1
chr8_1	exon	33002685	33002939	33002685	ID=Msa1190140-mRNA-1:exon:11144;Parent=Msa1190140-mRNA-1
chr8_1	exon	33002950	33003058	33002950	ID=Msa1190140-mRNA-1:exon:11143;Parent=Msa1190140-mRNA-1
chr8_1	CDS	33002950	33003058	33002950	ID=Msa1190140-mRNA-1:cds;Parent=Msa1190140-mRNA-1
chr8_1	CDS	33002685	33002939	33002685	ID=Msa1190140-mRNA-1:cds;Parent=Msa1190140-mRNA-1
chr8_1	CDS	33000109	33000176	33000109	ID=Msa1190140-mRNA-1:cds;Parent=Msa1190140-mRNA-1
chr8_1	CDS	32999713	32999844	32999713	ID=Msa1190140-mRNA-1:cds;Parent=Msa1190140-mRNA-1
chr8_1	CDS	32999369	32999533	32999369	ID=Msa1190140-mRNA-1:cds;Parent=Msa1190140-mRNA-1
chr8_1	CDS	32998721	32998957	32998721	ID=Msa1190140-mRNA-1:cds;Parent=Msa1190140-mRNA-1
chr8_1	three_prime_UTR	32998560	32998720	32998560	ID=Msa1190140-mRNA-1:three_prime_utr;Parent=Msa1190140-mRNA-1

Gene Sequence

>Msa1190140

TGGTGGCGTTACGGTGGTCGGATCAGATGCTCCGTCGGAGTACCACGTGGCTCCAAGAACAGACAACCAAACTCCGACCGCTGGATCAGCCGTTCAGCTTTTAGCGGCGGTGCTCCTCCGCAACAACCGCCGTATACGGCGGTGGTAACGGCGTCTCCGGCAGTTACGACGGTGCCAGAGAAGAAGAAGAGAGGAAGACCGAGAAAATATGCAGCGGATGGTTCAGTGACAGCGGCGCTGTCTCCGAAGCCGATATCGTCGTCTGCTCCGTTGCCGCCGGTGATTGATTTCGCGGCGGAGAAGCGTGCAAAAGTAAAGCCAGTTAGCTCTGTGAGCAAAACGAAATTTGAGTTGGAAAATATAGGTGAATGGGTCCCTTGCTCTGTTGGTTCAAATTTTACACCCCACATCATCACTGTTAATGCTGGAGAGGATGTTACCATGAAGGTTATTTCATTTTCTCAGCAAGGACCTCGAGCGGTATGCATTCTTTCAGCAAATGGTGTCATAAAAAGTGTCACACTTCGTCAGCCCGATTCTTCTGGGGGCACATTGACATATGAGGGACTGTTTGAAATTCTGTCTTTATCTGGTTCGTTCATGCCAAATGAAAGTGGAGGAGGAACACGAAGCAGATCAGGCGGCATGAGTGTGTCTTTGGCAAGTCCTGATGGACGTGTTGTTGGCGGAGGAGTAGCTGGTTTGTTGGTGGCTGCAAGTCCAGTGCAGGTAGTGGTTGGTAGTTTTATGGCAGGAAACCAACATGAGCAGAAGCCAAGAAATCAGAAACATGATGTGGTATCAACTGTGTCATCTTCTGCTGTTGTTCCCATCTCTACTCTTGATCCAATACCTATTCTATCATCAGTAACTTCCTTCCGTGGAGATAATTGGTCTGCTGTGCCAGCATCGGATGCAAAGGATAAGCCCGCTGCTGATATTAATGTGTCTCTTCCTGGAGGCTAA

Protein sequence

>Msa1190140

WWRYGGRIRCSVGVPRGSKNRQPNSDRWISRSAFSGGAPPQQPPYTAVVTASPAVTTVPEKKKRGRPRKYAADGSVTAALSPKPISSSAPLPPVIDFAAEKRAKVKPVSSVSKTKFELENIGEWVPCSVGSNFTPHIITVNAGEDVTMKVISFSQQGPRAVCILSANGVIKSVTLRQPDSSGGTLTYEGLFEILSLSGSFMPNESGGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFMAGNQHEQKPRNQKHDVVSTVSSSAVVPISTLDPIPILSSVTSFRGDNWSAVPASDAKDKPAADINVSLPGG*