Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356410 | XP_013459315.1 | 74.026 | 154 | 40 | 0 | 1 | 154 | 1 | 154 | 2.14e-79 | 242 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356410 | sp|Q39837|ALB1_SOYBN | 55.263 | 114 | 47 | 2 | 9 | 122 | 1 | 110 | 1.35e-35 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356410 | I3T793 | 74.026 | 154 | 40 | 0 | 1 | 154 | 1 | 154 | 1.02e-79 | 242 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa0356410 | -0.817474 | 3.236146e-52 | -8.615850e-47 |
| Msa0012800 | Msa0356410 | 0.810019 | 1.419473e-50 | -8.615850e-47 |
| Msa0021710 | Msa0356410 | -0.805785 | 1.128797e-49 | -8.615850e-47 |
| Msa0021870 | Msa0356410 | 0.807757 | 4.324589e-50 | -8.615850e-47 |
| Msa0031650 | Msa0356410 | 0.879925 | 8.367512e-70 | -8.615850e-47 |
| Msa0036230 | Msa0356410 | 0.866966 | 1.937180e-65 | -8.615850e-47 |
| Msa0036580 | Msa0356410 | 0.855928 | 4.539533e-62 | -8.615850e-47 |
| Msa0039200 | Msa0356410 | -0.815042 | 1.132081e-51 | -8.615850e-47 |
| Msa0046700 | Msa0356410 | -0.801574 | 8.446095e-49 | -8.615850e-47 |
| Msa0050360 | Msa0356410 | -0.812534 | 4.040339e-51 | -8.615850e-47 |
| Msa0050400 | Msa0356410 | -0.809593 | 1.752323e-50 | -8.615850e-47 |
| Msa0057740 | Msa0356410 | -0.821381 | 4.162194e-53 | -8.615850e-47 |
| Msa0061600 | Msa0356410 | 0.833211 | 6.075522e-56 | -8.615850e-47 |
| Msa0065190 | Msa0356410 | -0.810511 | 1.111348e-50 | -8.615850e-47 |
| Msa0080010 | Msa0356410 | 0.805347 | 1.394797e-49 | -8.615850e-47 |
| Msa0080620 | Msa0356410 | -0.812140 | 4.925790e-51 | -8.615850e-47 |
| Msa0084160 | Msa0356410 | 0.830602 | 2.678062e-55 | -8.615850e-47 |
| Msa0085710 | Msa0356410 | 0.815000 | 1.156903e-51 | -8.615850e-47 |
| Msa0086820 | Msa0356410 | -0.811140 | 8.124131e-51 | -8.615850e-47 |
| Msa0093530 | Msa0356410 | 0.865205 | 6.989376e-65 | -8.615850e-47 |
| Msa0094240 | Msa0356410 | -0.810863 | 9.330697e-51 | -8.615850e-47 |
| Msa0096860 | Msa0356410 | 0.804246 | 2.368121e-49 | -8.615850e-47 |
| Msa0103060 | Msa0356410 | -0.817200 | 3.730685e-52 | -8.615850e-47 |
| Msa0106130 | Msa0356410 | 0.816079 | 6.650983e-52 | -8.615850e-47 |
| Msa0107460 | Msa0356410 | -0.801675 | 8.049222e-49 | -8.615850e-47 |
| Msa0126960 | Msa0356410 | 0.866875 | 2.070542e-65 | -8.615850e-47 |
| Msa0129270 | Msa0356410 | 0.800165 | 1.637560e-48 | -8.615850e-47 |
| Msa0133670 | Msa0356410 | -0.811334 | 7.373128e-51 | -8.615850e-47 |
| Msa0133880 | Msa0356410 | -0.806736 | 7.118441e-50 | -8.615850e-47 |
| Msa0139270 | Msa0356410 | 0.866401 | 2.928439e-65 | -8.615850e-47 |
| Msa0160580 | Msa0356410 | 0.845213 | 4.671848e-59 | -8.615850e-47 |
| Msa0163690 | Msa0356410 | 0.803016 | 4.262256e-49 | -8.615850e-47 |
| Msa0171740 | Msa0356410 | 0.883977 | 2.840129e-71 | -8.615850e-47 |
| Msa0176620 | Msa0356410 | 0.856068 | 4.130444e-62 | -8.615850e-47 |
| Msa0184120 | Msa0356410 | -0.813727 | 2.210942e-51 | -8.615850e-47 |
| Msa0195190 | Msa0356410 | 0.811155 | 8.064067e-51 | -8.615850e-47 |
| Msa0197750 | Msa0356410 | 0.828314 | 9.631841e-55 | -8.615850e-47 |
| Msa0207970 | Msa0356410 | 0.800669 | 1.292904e-48 | -8.615850e-47 |
| Msa0218060 | Msa0356410 | 0.828526 | 8.560553e-55 | -8.615850e-47 |
| Msa0222070 | Msa0356410 | -0.831337 | 1.767635e-55 | -8.615850e-47 |
| Msa0222120 | Msa0356410 | -0.832437 | 9.458211e-56 | -8.615850e-47 |
| Msa0225910 | Msa0356410 | 0.819639 | 1.045054e-52 | -8.615850e-47 |
| Msa0227290 | Msa0356410 | -0.850090 | 2.125570e-60 | -8.615850e-47 |
| Msa0234120 | Msa0356410 | 0.837254 | 5.794036e-57 | -8.615850e-47 |
| Msa0236610 | Msa0356410 | 0.824023 | 1.010331e-53 | -8.615850e-47 |
| Msa0243970 | Msa0356410 | 0.843656 | 1.225123e-58 | -8.615850e-47 |
| Msa0243990 | Msa0356410 | 0.827359 | 1.633847e-54 | -8.615850e-47 |
| Msa0245660 | Msa0356410 | 0.834592 | 2.741014e-56 | -8.615850e-47 |
| Msa0263620 | Msa0356410 | -0.834124 | 3.592480e-56 | -8.615850e-47 |
| Msa0266640 | Msa0356410 | 0.861525 | 9.652515e-64 | -8.615850e-47 |
| Msa0266650 | Msa0356410 | 0.859449 | 4.104871e-63 | -8.615850e-47 |
| Msa0270460 | Msa0356410 | -0.802206 | 6.261832e-49 | -8.615850e-47 |
| Msa0274260 | Msa0356410 | 0.814880 | 1.229551e-51 | -8.615850e-47 |
| Msa0277280 | Msa0356410 | 0.814310 | 1.644296e-51 | -8.615850e-47 |
| Msa0278940 | Msa0356410 | 0.804496 | 2.100483e-49 | -8.615850e-47 |
| Msa0278950 | Msa0356410 | 0.801597 | 8.353584e-49 | -8.615850e-47 |
| Msa0278960 | Msa0356410 | 0.800277 | 1.553868e-48 | -8.615850e-47 |
| Msa0288270 | Msa0356410 | -0.802049 | 6.744851e-49 | -8.615850e-47 |
| Msa0295520 | Msa0356410 | -0.834149 | 3.541844e-56 | -8.615850e-47 |
| Msa0297650 | Msa0356410 | 0.814000 | 1.924686e-51 | -8.615850e-47 |
| Msa0301460 | Msa0356410 | -0.849411 | 3.290846e-60 | -8.615850e-47 |
| Msa0315300 | Msa0356410 | 0.814263 | 1.683963e-51 | -8.615850e-47 |
| Msa0318360 | Msa0356410 | 0.801783 | 7.649722e-49 | -8.615850e-47 |
| Msa0318370 | Msa0356410 | 0.846032 | 2.801329e-59 | -8.615850e-47 |
| Msa0322460 | Msa0356410 | 0.831330 | 1.774723e-55 | -8.615850e-47 |
| Msa0335340 | Msa0356410 | 0.806653 | 7.410820e-50 | -8.615850e-47 |
| Msa0336640 | Msa0356410 | 0.831723 | 1.420026e-55 | -8.615850e-47 |
| Msa0338900 | Msa0356410 | -0.827661 | 1.382869e-54 | -8.615850e-47 |
| Msa0356180 | Msa0356410 | 0.817961 | 2.513711e-52 | -8.615850e-47 |
| Msa0356200 | Msa0356410 | 0.993539 | 1.932418e-200 | -8.615850e-47 |
| Msa0356240 | Msa0356410 | 0.882036 | 1.458468e-70 | -8.615850e-47 |
| Msa0356250 | Msa0356410 | 0.954586 | 2.117325e-112 | -8.615850e-47 |
| Msa0356270 | Msa0356410 | 0.858836 | 6.265826e-63 | -8.615850e-47 |
| Msa0356320 | Msa0356410 | 0.903249 | 4.214733e-79 | -8.615850e-47 |
| Msa0356360 | Msa0356410 | 0.807435 | 5.061744e-50 | -8.615850e-47 |
| Msa0356380 | Msa0356410 | 0.992402 | 4.479469e-193 | -8.615850e-47 |
| Msa0356410 | Msa0373950 | -0.807283 | 5.452672e-50 | -8.615850e-47 |
| Msa0356410 | Msa0375430 | -0.813330 | 2.703172e-51 | -8.615850e-47 |
| Msa0356410 | Msa0377460 | -0.810075 | 1.380473e-50 | -8.615850e-47 |
| Msa0356410 | Msa0378000 | -0.801385 | 9.230272e-49 | -8.615850e-47 |
| Msa0356410 | Msa0379500 | -0.801526 | 8.638571e-49 | -8.615850e-47 |
| Msa0356410 | Msa0389830 | -0.812112 | 4.994495e-51 | -8.615850e-47 |
| Msa0356410 | Msa0393900 | 0.838137 | 3.438817e-57 | -8.615850e-47 |
| Msa0356410 | Msa0396790 | 0.815806 | 7.653405e-52 | -8.615850e-47 |
| Msa0356410 | Msa0403670 | -0.815653 | 8.280815e-52 | -8.615850e-47 |
| Msa0356410 | Msa0404180 | -0.828705 | 7.750930e-55 | -8.615850e-47 |
| Msa0356410 | Msa0405040 | -0.817137 | 3.854631e-52 | -8.615850e-47 |
| Msa0356410 | Msa0409250 | 0.824646 | 7.210136e-54 | -8.615850e-47 |
| Msa0356410 | Msa0409490 | 0.814783 | 1.291995e-51 | -8.615850e-47 |
| Msa0356410 | Msa0414480 | 0.809433 | 1.896971e-50 | -8.615850e-47 |
| Msa0356410 | Msa0415460 | -0.801215 | 1.000239e-48 | -8.615850e-47 |
| Msa0356410 | Msa0417150 | -0.800192 | 1.617346e-48 | -8.615850e-47 |
| Msa0356410 | Msa0418150 | 0.810656 | 1.034136e-50 | -8.615850e-47 |
| Msa0356410 | Msa0424240 | 0.835249 | 1.872951e-56 | -8.615850e-47 |
| Msa0356410 | Msa0426860 | -0.838762 | 2.371133e-57 | -8.615850e-47 |
| Msa0356410 | Msa0426890 | -0.838435 | 2.880172e-57 | -8.615850e-47 |
| Msa0356410 | Msa0444400 | 0.839367 | 1.653006e-57 | -8.615850e-47 |
| Msa0356410 | Msa0445530 | 0.820200 | 7.777915e-53 | -8.615850e-47 |
| Msa0356410 | Msa0449290 | 0.835333 | 1.783569e-56 | -8.615850e-47 |
| Msa0356410 | Msa0449360 | 0.917232 | 6.816855e-86 | -8.615850e-47 |
| Msa0356410 | Msa0449380 | 0.884912 | 1.278579e-71 | -8.615850e-47 |
| Msa0356410 | Msa0449940 | 0.825993 | 3.461439e-54 | -8.615850e-47 |
| Msa0356410 | Msa0453970 | 0.813663 | 2.284062e-51 | -8.615850e-47 |
| Msa0356410 | Msa0456480 | -0.838186 | 3.338802e-57 | -8.615850e-47 |
| Msa0356410 | Msa0463990 | -0.802907 | 4.489404e-49 | -8.615850e-47 |
| Msa0356410 | Msa0464300 | 0.827614 | 1.419344e-54 | -8.615850e-47 |
| Msa0356410 | Msa0464310 | 0.816211 | 6.216259e-52 | -8.615850e-47 |
| Msa0356410 | Msa0467800 | -0.805252 | 1.459957e-49 | -8.615850e-47 |
| Msa0356410 | Msa0467880 | -0.807678 | 4.494639e-50 | -8.615850e-47 |
| Msa0356410 | Msa0471090 | -0.809389 | 1.938484e-50 | -8.615850e-47 |
| Msa0356410 | Msa0473320 | -0.815967 | 7.046608e-52 | -8.615850e-47 |
| Msa0356410 | Msa0478400 | 0.830239 | 3.283863e-55 | -8.615850e-47 |
| Msa0356410 | Msa0482020 | -0.800168 | 1.635915e-48 | -8.615850e-47 |
| Msa0356410 | Msa0487100 | 0.834250 | 3.341218e-56 | -8.615850e-47 |
| Msa0356410 | Msa0491800 | 0.803733 | 3.028271e-49 | -8.615850e-47 |
| Msa0356410 | Msa0491950 | 0.820249 | 7.578042e-53 | -8.615850e-47 |
| Msa0356410 | Msa0493710 | 0.830217 | 3.326487e-55 | -8.615850e-47 |
| Msa0356410 | Msa0515680 | -0.802635 | 5.108793e-49 | -8.615850e-47 |
| Msa0356410 | Msa0515830 | -0.803713 | 3.056928e-49 | -8.615850e-47 |
| Msa0356410 | Msa0517400 | -0.811618 | 6.398054e-51 | -8.615850e-47 |
| Msa0356410 | Msa0528170 | -0.802505 | 5.434157e-49 | -8.615850e-47 |
| Msa0356410 | Msa0531040 | 0.811383 | 7.197582e-51 | -8.615850e-47 |
| Msa0356410 | Msa0531080 | 0.802434 | 5.621583e-49 | -8.615850e-47 |
| Msa0356410 | Msa0532670 | 0.805788 | 1.127383e-49 | -8.615850e-47 |
| Msa0356410 | Msa0533510 | 0.864838 | 9.115849e-65 | -8.615850e-47 |
| Msa0356410 | Msa0533520 | 0.863839 | 1.869091e-64 | -8.615850e-47 |
| Msa0356410 | Msa0538440 | 0.828382 | 9.274162e-55 | -8.615850e-47 |
| Msa0356410 | Msa0538450 | 0.805313 | 1.418183e-49 | -8.615850e-47 |
| Msa0356410 | Msa0538520 | 0.806561 | 7.747044e-50 | -8.615850e-47 |
| Msa0356410 | Msa0538530 | 0.817030 | 4.073679e-52 | -8.615850e-47 |
| Msa0356410 | Msa0548760 | 0.859170 | 4.978337e-63 | -8.615850e-47 |
| Msa0356410 | Msa0549330 | -0.802890 | 4.525417e-49 | -8.615850e-47 |
| Msa0356410 | Msa0549970 | 0.814919 | 1.205569e-51 | -8.615850e-47 |
| Msa0356410 | Msa0554660 | 0.805937 | 1.048509e-49 | -8.615850e-47 |
| Msa0356410 | Msa0558890 | -0.802837 | 4.641247e-49 | -8.615850e-47 |
| Msa0356410 | Msa0589450 | 0.801494 | 8.769707e-49 | -8.615850e-47 |
| Msa0356410 | Msa0589720 | 0.868543 | 6.039975e-66 | -8.615850e-47 |
| Msa0356410 | Msa0589730 | 0.864541 | 1.129360e-64 | -8.615850e-47 |
| Msa0356410 | Msa0589740 | 0.839968 | 1.153355e-57 | -8.615850e-47 |
| Msa0356410 | Msa0589750 | 0.851571 | 8.136810e-61 | -8.615850e-47 |
| Msa0356410 | Msa0591490 | 0.802003 | 6.895014e-49 | -8.615850e-47 |
| Msa0356410 | Msa0594330 | 0.836065 | 1.164136e-56 | -8.615850e-47 |
| Msa0356410 | Msa0595780 | -0.802588 | 5.223692e-49 | -8.615850e-47 |
| Msa0356410 | Msa0599600 | 0.803250 | 3.813378e-49 | -8.615850e-47 |
| Msa0356410 | Msa0603800 | 0.820711 | 5.936250e-53 | -8.615850e-47 |
| Msa0356410 | Msa0605480 | 0.820068 | 8.336350e-53 | -8.615850e-47 |
| Msa0356410 | Msa0606680 | -0.813319 | 2.718274e-51 | -8.615850e-47 |
| Msa0356410 | Msa0623750 | 0.833396 | 5.463930e-56 | -8.615850e-47 |
| Msa0356410 | Msa0630130 | 0.822435 | 2.373093e-53 | -8.615850e-47 |
| Msa0356410 | Msa0634290 | 0.830041 | 3.670333e-55 | -8.615850e-47 |
| Msa0356410 | Msa0635990 | -0.801995 | 6.919460e-49 | -8.615850e-47 |
| Msa0356410 | Msa0638040 | -0.852488 | 4.467326e-61 | -8.615850e-47 |
| Msa0356410 | Msa0640290 | 0.823866 | 1.099643e-53 | -8.615850e-47 |
| Msa0356410 | Msa0640880 | -0.815005 | 1.153930e-51 | -8.615850e-47 |
| Msa0356410 | Msa0645100 | 0.803105 | 4.086381e-49 | -8.615850e-47 |
| Msa0356410 | Msa0645120 | 0.856374 | 3.358706e-62 | -8.615850e-47 |
| Msa0356410 | Msa0646440 | 0.811416 | 7.078389e-51 | -8.615850e-47 |
| Msa0356410 | Msa0653710 | -0.818559 | 1.840617e-52 | -8.615850e-47 |
| Msa0356410 | Msa0668210 | 0.849055 | 4.132538e-60 | -8.615850e-47 |
| Msa0356410 | Msa0668220 | 0.827943 | 1.183392e-54 | -8.615850e-47 |
| Msa0356410 | Msa0677110 | -0.848846 | 4.724146e-60 | -8.615850e-47 |
| Msa0356410 | Msa0682420 | 0.802938 | 4.423181e-49 | -8.615850e-47 |
| Msa0356410 | Msa0684590 | 0.813426 | 2.575810e-51 | -8.615850e-47 |
| Msa0356410 | Msa0684600 | 0.850316 | 1.837210e-60 | -8.615850e-47 |
| Msa0356410 | Msa0688760 | -0.801567 | 8.473016e-49 | -8.615850e-47 |
| Msa0356410 | Msa0698860 | -0.802955 | 4.387226e-49 | -8.615850e-47 |
| Msa0356410 | Msa0698880 | -0.810308 | 1.229462e-50 | -8.615850e-47 |
| Msa0356410 | Msa0715260 | 0.848218 | 7.049095e-60 | -8.615850e-47 |
| Msa0356410 | Msa0716600 | 0.833989 | 3.884653e-56 | -8.615850e-47 |
| Msa0356410 | Msa0718770 | 0.812221 | 4.728133e-51 | -8.615850e-47 |
| Msa0356410 | Msa0729590 | -0.813993 | 1.931520e-51 | -8.615850e-47 |
| Msa0356410 | Msa0730890 | 0.819511 | 1.117426e-52 | -8.615850e-47 |
| Msa0356410 | Msa0744280 | -0.801090 | 1.060928e-48 | -8.615850e-47 |
| Msa0356410 | Msa0747500 | 0.804001 | 2.663144e-49 | -8.615850e-47 |
| Msa0356410 | Msa0757240 | 0.846244 | 2.452638e-59 | -8.615850e-47 |
| Msa0356410 | Msa0758150 | 0.851037 | 1.151833e-60 | -8.615850e-47 |
| Msa0356410 | Msa0766880 | -0.802976 | 4.344747e-49 | -8.615850e-47 |
| Msa0356410 | Msa0776340 | 0.809053 | 2.287777e-50 | -8.615850e-47 |
| Msa0356410 | Msa0776540 | 0.800601 | 1.334934e-48 | -8.615850e-47 |
| Msa0356410 | Msa0782030 | -0.802431 | 5.629547e-49 | -8.615850e-47 |
| Msa0356410 | Msa0793060 | -0.867793 | 1.053397e-65 | -8.615850e-47 |
| Msa0356410 | Msa0797810 | -0.825687 | 4.091494e-54 | -8.615850e-47 |
| Msa0356410 | Msa0798230 | 0.846789 | 1.742135e-59 | -8.615850e-47 |
| Msa0356410 | Msa0813630 | -0.808224 | 3.440939e-50 | -8.615850e-47 |
| Msa0356410 | Msa0816140 | 0.800387 | 1.476213e-48 | -8.615850e-47 |
| Msa0356410 | Msa0817100 | 0.851786 | 7.072460e-61 | -8.615850e-47 |
| Msa0356410 | Msa0822370 | -0.802542 | 5.339600e-49 | -8.615850e-47 |
| Msa0356410 | Msa0824860 | 0.818677 | 1.730598e-52 | -8.615850e-47 |
| Msa0356410 | Msa0827800 | 0.802568 | 5.274656e-49 | -8.615850e-47 |
| Msa0356410 | Msa0833910 | -0.809721 | 1.645081e-50 | -8.615850e-47 |
| Msa0356410 | Msa0834160 | -0.814256 | 1.689977e-51 | -8.615850e-47 |
| Msa0356410 | Msa0836740 | 0.848130 | 7.455692e-60 | -8.615850e-47 |
| Msa0356410 | Msa0854380 | 0.822472 | 2.325555e-53 | -8.615850e-47 |
| Msa0356410 | Msa0868870 | 0.809547 | 1.793084e-50 | -8.615850e-47 |
| Msa0356410 | Msa0883610 | 0.805359 | 1.386444e-49 | -8.615850e-47 |
| Msa0356410 | Msa0886370 | 0.827606 | 1.425408e-54 | -8.615850e-47 |
| Msa0356410 | Msa0896920 | 0.871522 | 6.411266e-67 | -8.615850e-47 |
| Msa0356410 | Msa0896950 | 0.826780 | 2.248017e-54 | -8.615850e-47 |
| Msa0356410 | Msa0896990 | 0.802073 | 6.669701e-49 | -8.615850e-47 |
| Msa0356410 | Msa0913500 | 0.808461 | 3.062586e-50 | -8.615850e-47 |
| Msa0356410 | Msa0913550 | 0.802261 | 6.102542e-49 | -8.615850e-47 |
| Msa0356410 | Msa0932900 | 0.813355 | 2.669785e-51 | -8.615850e-47 |
| Msa0356410 | Msa0932930 | 0.836586 | 8.580727e-57 | -8.615850e-47 |
| Msa0356410 | Msa0933610 | 0.814380 | 1.586674e-51 | -8.615850e-47 |
| Msa0356410 | Msa0951060 | 0.843025 | 1.805549e-58 | -8.615850e-47 |
| Msa0356410 | Msa0962290 | 0.808387 | 3.175801e-50 | -8.615850e-47 |
| Msa0356410 | Msa0964510 | 0.810112 | 1.355336e-50 | -8.615850e-47 |
| Msa0356410 | Msa0967450 | -0.816330 | 5.846587e-52 | -8.615850e-47 |
| Msa0356410 | Msa0970790 | 0.835185 | 1.943773e-56 | -8.615850e-47 |
| Msa0356410 | Msa0985250 | 0.821183 | 4.624335e-53 | -8.615850e-47 |
| Msa0356410 | Msa0985260 | 0.802474 | 5.515246e-49 | -8.615850e-47 |
| Msa0356410 | Msa0986620 | -0.809878 | 1.521662e-50 | -8.615850e-47 |
| Msa0356410 | Msa0987550 | 0.807012 | 6.220588e-50 | -8.615850e-47 |
| Msa0356410 | Msa0996940 | 0.804098 | 2.543079e-49 | -8.615850e-47 |
| Msa0356410 | Msa0996980 | 0.839333 | 1.686881e-57 | -8.615850e-47 |
| Msa0356410 | Msa1001780 | -0.804987 | 1.659309e-49 | -8.615850e-47 |
| Msa0356410 | Msa1006940 | 0.844115 | 9.234558e-59 | -8.615850e-47 |
| Msa0356410 | Msa1024480 | 0.831809 | 1.352500e-55 | -8.615850e-47 |
| Msa0356410 | Msa1024580 | -0.808470 | 3.049111e-50 | -8.615850e-47 |
| Msa0356410 | Msa1030430 | -0.827971 | 1.164695e-54 | -8.615850e-47 |
| Msa0356410 | Msa1036020 | 0.829549 | 4.838410e-55 | -8.615850e-47 |
| Msa0356410 | Msa1046220 | 0.829723 | 4.388133e-55 | -8.615850e-47 |
| Msa0356410 | Msa1061670 | 0.825854 | 3.734850e-54 | -8.615850e-47 |
| Msa0356410 | Msa1061760 | 0.827209 | 1.775474e-54 | -8.615850e-47 |
| Msa0356410 | Msa1064940 | 0.833623 | 4.794578e-56 | -8.615850e-47 |
| Msa0356410 | Msa1069440 | -0.858033 | 1.087523e-62 | -8.615850e-47 |
| Msa0356410 | Msa1074630 | -0.800632 | 1.315930e-48 | -8.615850e-47 |
| Msa0356410 | Msa1076280 | 0.812759 | 3.607554e-51 | -8.615850e-47 |
| Msa0356410 | Msa1079610 | -0.813707 | 2.233620e-51 | -8.615850e-47 |
| Msa0356410 | Msa1083100 | 0.837506 | 4.994343e-57 | -8.615850e-47 |
| Msa0356410 | Msa1087380 | 0.806103 | 9.677665e-50 | -8.615850e-47 |
| Msa0356410 | Msa1099640 | 0.809654 | 1.700647e-50 | -8.615850e-47 |
| Msa0356410 | Msa1100560 | 0.819225 | 1.298518e-52 | -8.615850e-47 |
| Msa0356410 | Msa1103450 | 0.811183 | 7.951225e-51 | -8.615850e-47 |
| Msa0356410 | Msa1106960 | 0.813388 | 2.624724e-51 | -8.615850e-47 |
| Msa0356410 | Msa1107320 | 0.818364 | 2.037137e-52 | -8.615850e-47 |
| Msa0356410 | Msa1110040 | 0.820643 | 6.153469e-53 | -8.615850e-47 |
| Msa0356410 | Msa1124440 | -0.840358 | 9.123109e-58 | -8.615850e-47 |
| Msa0356410 | Msa1127940 | 0.804054 | 2.597175e-49 | -8.615850e-47 |
| Msa0356410 | Msa1130070 | -0.814466 | 1.518539e-51 | -8.615850e-47 |
| Msa0356410 | Msa1130730 | -0.802144 | 6.448108e-49 | -8.615850e-47 |
| Msa0356410 | Msa1136060 | 0.812322 | 4.494744e-51 | -8.615850e-47 |
| Msa0356410 | Msa1138110 | 0.809698 | 1.663803e-50 | -8.615850e-47 |
| Msa0356410 | Msa1138600 | -0.865862 | 4.339353e-65 | -8.615850e-47 |
| Msa0356410 | Msa1150860 | 0.812094 | 5.038880e-51 | -8.615850e-47 |
| Msa0356410 | Msa1150880 | 0.805380 | 1.372581e-49 | -8.615850e-47 |
| Msa0356410 | Msa1157310 | -0.800014 | 1.757949e-48 | -8.615850e-47 |
| Msa0356410 | Msa1160540 | 0.806410 | 8.337271e-50 | -8.615850e-47 |
| Msa0356410 | Msa1161160 | -0.817401 | 3.361167e-52 | -8.615850e-47 |
| Msa0356410 | Msa1165860 | 0.807107 | 5.940032e-50 | -8.615850e-47 |
| Msa0356410 | Msa1168130 | -0.812234 | 4.697060e-51 | -8.615850e-47 |
| Msa0356410 | Msa1173290 | 0.839415 | 1.606260e-57 | -8.615850e-47 |
| Msa0356410 | Msa1173410 | -0.831623 | 1.502579e-55 | -8.615850e-47 |
| Msa0356410 | Msa1175590 | -0.813612 | 2.343556e-51 | -8.615850e-47 |
| Msa0356410 | Msa1179190 | 0.827246 | 1.739711e-54 | -8.615850e-47 |
| Msa0356410 | Msa1190090 | 0.866701 | 2.352503e-65 | -8.615850e-47 |
| Msa0356410 | Msa1190140 | 0.803992 | 2.675273e-49 | -8.615850e-47 |
| Msa0356410 | Msa1198420 | -0.803748 | 3.006376e-49 | -8.615850e-47 |
| Msa0356410 | Msa1206330 | 0.800950 | 1.133307e-48 | -8.615850e-47 |
| Msa0356410 | Msa1206380 | 0.807477 | 4.959322e-50 | -8.615850e-47 |
| Msa0356410 | Msa1209650 | -0.804266 | 2.346126e-49 | -8.615850e-47 |
| Msa0356410 | Msa1211160 | 0.822576 | 2.199633e-53 | -8.615850e-47 |
| Msa0356410 | Msa1219780 | 0.828574 | 8.336271e-55 | -8.615850e-47 |
| Msa0356410 | Msa1221170 | 0.839348 | 1.671898e-57 | -8.615850e-47 |
| Msa0356410 | Msa1233620 | 0.853730 | 1.969575e-61 | -8.615850e-47 |
| Msa0356410 | Msa1235770 | -0.821301 | 4.341490e-53 | -8.615850e-47 |
| Msa0356410 | Msa1246420 | -0.853174 | 2.845196e-61 | -8.615850e-47 |
| Msa0356410 | Msa1258020 | 0.863393 | 2.569866e-64 | -8.615850e-47 |
| Msa0356410 | Msa1263370 | 0.805926 | 1.054251e-49 | -8.615850e-47 |
| Msa0356410 | Msa1265500 | 0.831395 | 1.710195e-55 | -8.615850e-47 |
| Msa0356410 | Msa1266710 | 0.810743 | 9.904336e-51 | -8.615850e-47 |
| Msa0356410 | Msa1275840 | 0.876609 | 1.218720e-68 | -8.615850e-47 |
| Msa0356410 | Msa1298740 | -0.812305 | 4.533773e-51 | -8.615850e-47 |
| Msa0356410 | Msa1299310 | 0.830980 | 2.162663e-55 | -8.615850e-47 |
| Msa0356410 | Msa1303470 | -0.806368 | 8.511319e-50 | -8.615850e-47 |
| Msa0356410 | Msa1309910 | -0.813903 | 2.022387e-51 | -8.615850e-47 |
| Msa0356410 | Msa1314020 | 0.864868 | 8.918141e-65 | -8.615850e-47 |
| Msa0356410 | Msa1323150 | 0.815092 | 1.103577e-51 | -8.615850e-47 |
| Msa0356410 | Msa1329770 | 0.815814 | 7.623599e-52 | -8.615850e-47 |
| Msa0356410 | Msa1335500 | 0.802149 | 6.432699e-49 | -8.615850e-47 |
| Msa0356410 | Msa1339490 | 0.847055 | 1.472838e-59 | -8.615850e-47 |
| Msa0356410 | Msa1350490 | 0.825815 | 3.815684e-54 | -8.615850e-47 |
| Msa0356410 | Msa1355330 | 0.815454 | 9.166875e-52 | -8.615850e-47 |
| Msa0356410 | Msa1362520 | 0.820292 | 7.408458e-53 | -8.615850e-47 |
| Msa0356410 | Msa1370930 | 0.809745 | 1.625418e-50 | -8.615850e-47 |
| Msa0356410 | Msa1378950 | 0.864900 | 8.717049e-65 | -8.615850e-47 |
| Msa0356410 | Msa1379250 | 0.807353 | 5.267686e-50 | -8.615850e-47 |
| Msa0356410 | Msa1379370 | -0.813437 | 2.560674e-51 | -8.615850e-47 |
| Msa0356410 | Msa1382180 | 0.813780 | 2.152705e-51 | -8.615850e-47 |
| Msa0356410 | Msa1384980 | -0.800941 | 1.137998e-48 | -8.615850e-47 |
| Msa0356410 | Msa1395690 | 0.855104 | 7.889526e-62 | -8.615850e-47 |
| Msa0356410 | Msa1401650 | 0.859991 | 2.818380e-63 | -8.615850e-47 |
| Msa0356410 | Msa1406230 | -0.850060 | 2.167034e-60 | -8.615850e-47 |
| Msa0356410 | Msa1407210 | 0.811896 | 5.566646e-51 | -8.615850e-47 |
| Msa0356410 | Msa1409600 | 0.809272 | 2.053658e-50 | -8.615850e-47 |
| Msa0356410 | Msa1411550 | 0.833485 | 5.191991e-56 | -8.615850e-47 |
| Msa0356410 | Msa1417220 | 0.803213 | 3.881179e-49 | -8.615850e-47 |
| Msa0356410 | Msa1432350 | -0.801225 | 9.957281e-49 | -8.615850e-47 |
| Msa0356410 | Msa1441300 | 0.836012 | 1.200739e-56 | -8.615850e-47 |
| Msa0356410 | Msa1445780 | 0.818099 | 2.339299e-52 | -8.615850e-47 |
| Msa0356410 | Msa1445900 | 0.801466 | 8.886288e-49 | -8.615850e-47 |
| Msa0356410 | Msa1448150 | 0.832981 | 6.930252e-56 | -8.615850e-47 |
| Msa0356410 | Msa1452200 | -0.800328 | 1.517218e-48 | -8.615850e-47 |
| Msa0356410 | Msa1452920 | 0.806784 | 6.951407e-50 | -8.615850e-47 |
| Msa0356410 | Msa1453650 | 0.818188 | 2.233570e-52 | -8.615850e-47 |
| Msa0356410 | Msa1456600 | 0.804876 | 1.750499e-49 | -8.615850e-47 |
| Msa0356410 | Msa1458920 | -0.822040 | 2.930078e-53 | -8.615850e-47 |
| Msa0356410 | Msa1459610 | 0.801906 | 7.217466e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356410 | MtrunA17_Chr3g0090571 | 74.026 | 154 | 40 | 0 | 1 | 154 | 1 | 154 | 1.97e-83 | 242 |
| Msa0356410 | MtrunA17_Chr7g0231991 | 55.556 | 135 | 53 | 3 | 23 | 154 | 2 | 132 | 4.02e-47 | 149 |
| Msa0356410 | MtrunA17_Chr7g0232011 | 52.258 | 155 | 63 | 6 | 1 | 154 | 1 | 145 | 2.83e-46 | 147 |
| Msa0356410 | MtrunA17_Chr6g0456951 | 50.000 | 150 | 56 | 6 | 1 | 148 | 1 | 133 | 2.99e-38 | 127 |
| Msa0356410 | MtrunA17_Chr3g0111281 | 45.161 | 155 | 63 | 5 | 1 | 150 | 1 | 138 | 2.48e-36 | 122 |
| Msa0356410 | MtrunA17_Chr3g0111261 | 47.712 | 153 | 58 | 5 | 1 | 150 | 1 | 134 | 7.07e-34 | 115 |
| Msa0356410 | MtrunA17_Chr7g0236791 | 47.143 | 140 | 64 | 6 | 1 | 136 | 1 | 134 | 1.28e-33 | 115 |
| Msa0356410 | MtrunA17_Chr3g0111111 | 40.645 | 155 | 70 | 4 | 1 | 150 | 1 | 138 | 7.38e-33 | 113 |
| Msa0356410 | MtrunA17_Chr8g0344771 | 49.550 | 111 | 53 | 3 | 36 | 145 | 11 | 119 | 9.78e-33 | 112 |
| Msa0356410 | MtrunA17_Chr8g0344791 | 54.902 | 102 | 43 | 3 | 36 | 136 | 11 | 110 | 4.54e-32 | 110 |
| Msa0356410 | MtrunA17_Chr3g0111131 | 45.455 | 132 | 67 | 2 | 1 | 132 | 1 | 127 | 1.64e-31 | 109 |
| Msa0356410 | MtrunA17_Chr3g0111351 | 42.958 | 142 | 67 | 5 | 1 | 137 | 9 | 141 | 1.83e-31 | 110 |
| Msa0356410 | MtrunA17_Chr7g0236801 | 46.429 | 140 | 66 | 6 | 1 | 136 | 1 | 135 | 2.30e-31 | 109 |
| Msa0356410 | MtrunA17_Chr6g0464071 | 43.038 | 158 | 56 | 6 | 1 | 150 | 1 | 132 | 4.22e-30 | 106 |
| Msa0356410 | MtrunA17_Chr3g0111241 | 46.721 | 122 | 55 | 4 | 1 | 119 | 1 | 115 | 1.43e-29 | 104 |
| Msa0356410 | MtrunA17_Chr3g0111071 | 43.165 | 139 | 67 | 6 | 1 | 136 | 1 | 130 | 1.52e-29 | 104 |
| Msa0356410 | MtrunA17_Chr3g0104571 | 42.949 | 156 | 65 | 7 | 1 | 152 | 1 | 136 | 1.61e-29 | 104 |
| Msa0356410 | MtrunA17_Chr6g0468621 | 43.506 | 154 | 66 | 8 | 1 | 153 | 1 | 134 | 1.04e-28 | 102 |
| Msa0356410 | MtrunA17_Chr8g0344801 | 54.444 | 90 | 38 | 3 | 49 | 136 | 7 | 95 | 2.64e-28 | 100 |
| Msa0356410 | MtrunA17_Chr6g0468601 | 41.290 | 155 | 71 | 7 | 1 | 153 | 1 | 137 | 7.36e-28 | 100 |
| Msa0356410 | MtrunA17_Chr3g0111081 | 43.478 | 138 | 68 | 6 | 1 | 136 | 1 | 130 | 1.37e-27 | 100 |
| Msa0356410 | MtrunA17_Chr8g0357331 | 54.321 | 81 | 37 | 0 | 74 | 154 | 21 | 101 | 5.10e-27 | 97.4 |
| Msa0356410 | MtrunA17_Chr6g0456991 | 60.256 | 78 | 29 | 2 | 51 | 127 | 29 | 105 | 1.56e-26 | 96.3 |
| Msa0356410 | MtrunA17_Chr3g0111191 | 39.837 | 123 | 63 | 3 | 1 | 118 | 1 | 117 | 4.12e-24 | 90.5 |
| Msa0356410 | MtrunA17_Chr4g0012121 | 38.750 | 160 | 77 | 5 | 1 | 154 | 1 | 145 | 5.32e-23 | 88.6 |
| Msa0356410 | MtrunA17_Chr3g0111221 | 47.778 | 90 | 42 | 2 | 47 | 134 | 21 | 107 | 8.76e-23 | 87.0 |
| Msa0356410 | MtrunA17_Chr3g0092701 | 64.516 | 62 | 22 | 0 | 1 | 62 | 1 | 62 | 2.37e-22 | 84.3 |
| Msa0356410 | MtrunA17_Chr1g0153591 | 39.370 | 127 | 54 | 3 | 1 | 124 | 1 | 107 | 8.54e-22 | 84.3 |
| Msa0356410 | MtrunA17_Chr7g0225821 | 37.302 | 126 | 71 | 5 | 1 | 124 | 1 | 120 | 8.23e-21 | 82.0 |
| Msa0356410 | MtrunA17_Chr3g0092851 | 63.793 | 58 | 20 | 1 | 1 | 57 | 1 | 58 | 3.09e-20 | 79.3 |
| Msa0356410 | MtrunA17_Chr3g0092881 | 58.571 | 70 | 28 | 1 | 1 | 69 | 1 | 70 | 4.86e-20 | 78.6 |
| Msa0356410 | MtrunA17_Chr3g0092841 | 60.000 | 70 | 27 | 1 | 1 | 69 | 1 | 70 | 8.00e-20 | 78.2 |
| Msa0356410 | MtrunA17_Chr3g0092801 | 60.000 | 70 | 27 | 1 | 1 | 69 | 1 | 70 | 8.00e-20 | 78.2 |
| Msa0356410 | MtrunA17_Chr3g0111311 | 52.326 | 86 | 35 | 4 | 35 | 119 | 10 | 90 | 9.21e-20 | 78.6 |
| Msa0356410 | MtrunA17_Chr8g0359071 | 35.616 | 146 | 70 | 6 | 3 | 144 | 4 | 129 | 4.03e-19 | 78.2 |
| Msa0356410 | MtrunA17_Chr3g0092704 | 63.793 | 58 | 21 | 0 | 1 | 58 | 1 | 58 | 3.97e-18 | 74.3 |
| Msa0356410 | MtrunA17_Chr3g0090581 | 63.265 | 49 | 18 | 0 | 21 | 69 | 22 | 70 | 3.36e-16 | 68.9 |
| Msa0356410 | MtrunA17_Chr3g0092901 | 62.963 | 54 | 19 | 1 | 1 | 54 | 1 | 53 | 4.86e-15 | 65.9 |
| Msa0356410 | MtrunA17_Chr3g0111201 | 49.206 | 63 | 21 | 1 | 88 | 150 | 3 | 54 | 1.33e-14 | 64.3 |
| Msa0356410 | MtrunA17_Chr3g0111711 | 38.843 | 121 | 58 | 6 | 1 | 117 | 1 | 109 | 2.93e-14 | 64.7 |
| Msa0356410 | MtrunA17_Chr3g0092771 | 87.879 | 33 | 4 | 0 | 1 | 33 | 1 | 33 | 2.93e-13 | 60.8 |
| Msa0356410 | MtrunA17_Chr3g0092941 | 78.378 | 37 | 7 | 1 | 1 | 36 | 1 | 37 | 1.09e-11 | 56.6 |
| Msa0356410 | MtrunA17_Chr3g0092731 | 46.032 | 63 | 25 | 1 | 1 | 63 | 1 | 54 | 3.94e-11 | 55.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 41 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCTCCCTTGGTGGTTATT+TGG | 0.237560 | 3_1:+35281266 | Msa0356410:CDS |
| CCTAATGCTGATATTGAATA+TGG | 0.285356 | 3_1:+35281413 | Msa0356410:CDS |
| TTTGTTTCCAATTGATCAAT+TGG | 0.321512 | 3_1:+35281648 | Msa0356410:three_prime_UTR |
| TTGTGATTACCGCAATAATT+CGG | 0.329100 | 3_1:-35281233 | None:intergenic |
| AAGAAATCCAATTGATCAAT+TGG | 0.360164 | 3_1:-35281655 | None:intergenic |
| TTATGTTAAGCTTGCTACTT+TGG | 0.363249 | 3_1:+35280901 | Msa0356410:CDS |
| TGTGATTACCGCAATAATTC+GGG | 0.372686 | 3_1:-35281232 | None:intergenic |
| CTGCTTCAACGTTCTTCGTC+TGG | 0.376847 | 3_1:-35281169 | None:intergenic |
| AGCTTAACATAAGTCATTGT+TGG | 0.383649 | 3_1:-35280890 | None:intergenic |
| AGACTACTTGAAGATGGCTT+TGG | 0.386657 | 3_1:+35281538 | Msa0356410:CDS |
| CTCCCTTGGTGGTTATTTGG+AGG | 0.393690 | 3_1:+35281269 | Msa0356410:CDS |
| GCAGAACGTTACTTCAAGAT+TGG | 0.399752 | 3_1:+35281461 | Msa0356410:CDS |
| ATTGATCAATTGGATTTCTT+CGG | 0.409409 | 3_1:+35281658 | Msa0356410:three_prime_UTR |
| CGAGACATATCATTCTTAAG+TGG | 0.433054 | 3_1:-35281567 | None:intergenic |
| CCATATTCAATATCAGCATT+AGG | 0.437256 | 3_1:-35281413 | None:intergenic |
| CCGCAATAATTCGGGTCAAA+TGG | 0.448213 | 3_1:-35281224 | None:intergenic |
| CGGGTCAAATGGTGAACAAA+AGG | 0.469881 | 3_1:-35281213 | None:intergenic |
| AAGATTGTCGCTGTCTCCCT+TGG | 0.475042 | 3_1:+35281255 | Msa0356410:CDS |
| TCTTCGGTATGTATTGTGCA+TGG | 0.484118 | 3_1:+35281674 | Msa0356410:three_prime_UTR |
| GGTAATTGCATAAATCCAAC+TGG | 0.487242 | 3_1:+35281290 | Msa0356410:CDS |
| ATTGTCGCTGTCTCCCTTGG+TGG | 0.496818 | 3_1:+35281258 | Msa0356410:CDS |
| GAGTGCATCAAGAAGGGAAG+TGG | 0.522512 | 3_1:+35281371 | Msa0356410:CDS |
| CTTCGGTATGTATTGTGCAT+GGG | 0.523431 | 3_1:+35281675 | Msa0356410:three_prime_UTR |
| ATAGTATGTTCAGAACCAGT+TGG | 0.528893 | 3_1:-35281305 | None:intergenic |
| GCAGCGAGCTGTCCGTATGC+AGG | 0.535912 | 3_1:+35281188 | Msa0356410:CDS |
| AATTGATCAATTGGAAACAA+AGG | 0.536616 | 3_1:-35281646 | None:intergenic |
| TCATGCCGAGTGCATCAAGA+AGG | 0.559241 | 3_1:+35281364 | Msa0356410:CDS |
| CGTTCTGCTTCATTTACAGA+GGG | 0.566815 | 3_1:-35281446 | None:intergenic |
| CCATTTGACCCGAATTATTG+CGG | 0.576067 | 3_1:+35281224 | Msa0356410:CDS |
| GAACAAAAGGAACCTGCATA+CGG | 0.576509 | 3_1:-35281200 | None:intergenic |
| ACTTCCCTTCTTGATGCACT+CGG | 0.605609 | 3_1:-35281369 | None:intergenic |
| TACCTCCAAATAACCACCAA+GGG | 0.606319 | 3_1:-35281271 | None:intergenic |
| ACAAATATACATACAGAATG+TGG | 0.609862 | 3_1:-35280939 | None:intergenic |
| CATGCCGAGTGCATCAAGAA+GGG | 0.625240 | 3_1:+35281365 | Msa0356410:CDS |
| ACGTTCTGCTTCATTTACAG+AGG | 0.626101 | 3_1:-35281447 | None:intergenic |
| ATGCTGATATTGAATATGGA+TGG | 0.639133 | 3_1:+35281417 | Msa0356410:CDS |
| AGTGCATCAAGAAGGGAAGT+GGG | 0.648471 | 3_1:+35281372 | Msa0356410:CDS |
| CATGCACATGATAACATGCA+TGG | 0.677543 | 3_1:-35281725 | None:intergenic |
| TTACCTCCAAATAACCACCA+AGG | 0.709136 | 3_1:-35281272 | None:intergenic |
| ACATACTATGAAGATGATCG+AGG | 0.709642 | 3_1:+35281319 | Msa0356410:CDS |
| TAGATGCATGACAACATGCA+TGG | 0.743352 | 3_1:-35281605 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATATAACATATATATTT+AGG | - | chr3_1:35281097-35281116 | None:intergenic | 10.0% |
| !! | TGAATATAACATATATATTT+AGG | - | chr3_1:35281097-35281116 | None:intergenic | 10.0% |
| !! | TCGATATATATTTATATGTT+AGG | + | chr3_1:35280986-35281005 | Msa0356410:intron | 15.0% |
| !! | TCGATATATATTTATATGTT+AGG | + | chr3_1:35280986-35281005 | Msa0356410:intron | 15.0% |
| !! | CATATATATTTAGGAAAGTT+TGG | - | chr3_1:35281088-35281107 | None:intergenic | 20.0% |
| !!! | TGAAGAAATTTTTTACTACA+GGG | - | chr3_1:35281493-35281512 | None:intergenic | 20.0% |
| !!! | TTGAAGAAATTTTTTACTAC+AGG | - | chr3_1:35281494-35281513 | None:intergenic | 20.0% |
| !! | CATATATATTTAGGAAAGTT+TGG | - | chr3_1:35281088-35281107 | None:intergenic | 20.0% |
| !!! | TGAAGAAATTTTTTACTACA+GGG | - | chr3_1:35281493-35281512 | None:intergenic | 20.0% |
| !!! | TTGAAGAAATTTTTTACTAC+AGG | - | chr3_1:35281494-35281513 | None:intergenic | 20.0% |
| ! | ACAAATATACATACAGAATG+TGG | - | chr3_1:35280942-35280961 | None:intergenic | 25.0% |
| ! | TTATATTCACACATGTGTAT+TGG | + | chr3_1:35281108-35281127 | Msa0356410:intron | 25.0% |
| ! | AATTGATCAATTGGAAACAA+AGG | - | chr3_1:35281649-35281668 | None:intergenic | 25.0% |
| ! | TTTGTTTCCAATTGATCAAT+TGG | + | chr3_1:35281648-35281667 | Msa0356410:three_prime_UTR | 25.0% |
| ! | AAGAAATCCAATTGATCAAT+TGG | - | chr3_1:35281658-35281677 | None:intergenic | 25.0% |
| ! | ATTGATCAATTGGATTTCTT+CGG | + | chr3_1:35281658-35281677 | Msa0356410:three_prime_UTR | 25.0% |
| ! | ACAAATATACATACAGAATG+TGG | - | chr3_1:35280942-35280961 | None:intergenic | 25.0% |
| ! | TTATATTCACACATGTGTAT+TGG | + | chr3_1:35281108-35281127 | Msa0356410:intron | 25.0% |
| ! | AATTGATCAATTGGAAACAA+AGG | - | chr3_1:35281649-35281668 | None:intergenic | 25.0% |
| ! | TTTGTTTCCAATTGATCAAT+TGG | + | chr3_1:35281648-35281667 | Msa0356410:three_prime_UTR | 25.0% |
| ! | AAGAAATCCAATTGATCAAT+TGG | - | chr3_1:35281658-35281677 | None:intergenic | 25.0% |
| ! | ATTGATCAATTGGATTTCTT+CGG | + | chr3_1:35281658-35281677 | Msa0356410:three_prime_UTR | 25.0% |
| AGCTTAACATAAGTCATTGT+TGG | - | chr3_1:35280893-35280912 | None:intergenic | 30.0% | |
| !! | TTATGTTAAGCTTGCTACTT+TGG | + | chr3_1:35280901-35280920 | Msa0356410:CDS | 30.0% |
| TTGTGATTACCGCAATAATT+CGG | - | chr3_1:35281236-35281255 | None:intergenic | 30.0% | |
| CCATATTCAATATCAGCATT+AGG | - | chr3_1:35281416-35281435 | None:intergenic | 30.0% | |
| CCTAATGCTGATATTGAATA+TGG | + | chr3_1:35281413-35281432 | Msa0356410:CDS | 30.0% | |
| ATGCTGATATTGAATATGGA+TGG | + | chr3_1:35281417-35281436 | Msa0356410:CDS | 30.0% | |
| !!! | GAAATTTTTTACTACAGGGT+TGG | - | chr3_1:35281489-35281508 | None:intergenic | 30.0% |
| !! | GTCTTTTTCATTAGAGTTTG+AGG | - | chr3_1:35281522-35281541 | None:intergenic | 30.0% |
| TGAAAAAGACTACTTGAAGA+TGG | + | chr3_1:35281532-35281551 | Msa0356410:CDS | 30.0% | |
| AGCTTAACATAAGTCATTGT+TGG | - | chr3_1:35280893-35280912 | None:intergenic | 30.0% | |
| !! | TTATGTTAAGCTTGCTACTT+TGG | + | chr3_1:35280901-35280920 | Msa0356410:CDS | 30.0% |
| TTGTGATTACCGCAATAATT+CGG | - | chr3_1:35281236-35281255 | None:intergenic | 30.0% | |
| CCATATTCAATATCAGCATT+AGG | - | chr3_1:35281416-35281435 | None:intergenic | 30.0% | |
| CCTAATGCTGATATTGAATA+TGG | + | chr3_1:35281413-35281432 | Msa0356410:CDS | 30.0% | |
| ATGCTGATATTGAATATGGA+TGG | + | chr3_1:35281417-35281436 | Msa0356410:CDS | 30.0% | |
| !!! | GAAATTTTTTACTACAGGGT+TGG | - | chr3_1:35281489-35281508 | None:intergenic | 30.0% |
| !! | GTCTTTTTCATTAGAGTTTG+AGG | - | chr3_1:35281522-35281541 | None:intergenic | 30.0% |
| TGAAAAAGACTACTTGAAGA+TGG | + | chr3_1:35281532-35281551 | Msa0356410:CDS | 30.0% | |
| ATGGCAAAGGCAGTTAAAAT+TGG | - | chr3_1:35281136-35281155 | None:intergenic | 35.0% | |
| TGTGATTACCGCAATAATTC+GGG | - | chr3_1:35281235-35281254 | None:intergenic | 35.0% | |
| GGTAATTGCATAAATCCAAC+TGG | + | chr3_1:35281290-35281309 | Msa0356410:CDS | 35.0% | |
| ATAGTATGTTCAGAACCAGT+TGG | - | chr3_1:35281308-35281327 | None:intergenic | 35.0% | |
| ACATACTATGAAGATGATCG+AGG | + | chr3_1:35281319-35281338 | Msa0356410:CDS | 35.0% | |
| ! | GCATGAGTTTTGCATAAGTT+AGG | - | chr3_1:35281350-35281369 | None:intergenic | 35.0% |
| CGAGACATATCATTCTTAAG+TGG | - | chr3_1:35281570-35281589 | None:intergenic | 35.0% | |
| ATGGCAAAGGCAGTTAAAAT+TGG | - | chr3_1:35281136-35281155 | None:intergenic | 35.0% | |
| TGTGATTACCGCAATAATTC+GGG | - | chr3_1:35281235-35281254 | None:intergenic | 35.0% | |
| GGTAATTGCATAAATCCAAC+TGG | + | chr3_1:35281290-35281309 | Msa0356410:CDS | 35.0% | |
| ATAGTATGTTCAGAACCAGT+TGG | - | chr3_1:35281308-35281327 | None:intergenic | 35.0% | |
| ACATACTATGAAGATGATCG+AGG | + | chr3_1:35281319-35281338 | Msa0356410:CDS | 35.0% | |
| ! | GCATGAGTTTTGCATAAGTT+AGG | - | chr3_1:35281350-35281369 | None:intergenic | 35.0% |
| CGAGACATATCATTCTTAAG+TGG | - | chr3_1:35281570-35281589 | None:intergenic | 35.0% | |
| ACGATTACTGCAAATGGCAA+AGG | - | chr3_1:35281149-35281168 | None:intergenic | 40.0% | |
| GAACAAAAGGAACCTGCATA+CGG | - | chr3_1:35281203-35281222 | None:intergenic | 40.0% | |
| CCATTTGACCCGAATTATTG+CGG | + | chr3_1:35281224-35281243 | Msa0356410:CDS | 40.0% | |
| TACCTCCAAATAACCACCAA+GGG | - | chr3_1:35281274-35281293 | None:intergenic | 40.0% | |
| TTACCTCCAAATAACCACCA+AGG | - | chr3_1:35281275-35281294 | None:intergenic | 40.0% | |
| CGTTCTGCTTCATTTACAGA+GGG | - | chr3_1:35281449-35281468 | None:intergenic | 40.0% | |
| ACGTTCTGCTTCATTTACAG+AGG | - | chr3_1:35281450-35281469 | None:intergenic | 40.0% | |
| GCAGAACGTTACTTCAAGAT+TGG | + | chr3_1:35281461-35281480 | Msa0356410:CDS | 40.0% | |
| AGACTACTTGAAGATGGCTT+TGG | + | chr3_1:35281538-35281557 | Msa0356410:CDS | 40.0% | |
| TAGATGCATGACAACATGCA+TGG | - | chr3_1:35281608-35281627 | None:intergenic | 40.0% | |
| TCTTCGGTATGTATTGTGCA+TGG | + | chr3_1:35281674-35281693 | Msa0356410:three_prime_UTR | 40.0% | |
| CTTCGGTATGTATTGTGCAT+GGG | + | chr3_1:35281675-35281694 | Msa0356410:three_prime_UTR | 40.0% | |
| ACGATTACTGCAAATGGCAA+AGG | - | chr3_1:35281149-35281168 | None:intergenic | 40.0% | |
| GAACAAAAGGAACCTGCATA+CGG | - | chr3_1:35281203-35281222 | None:intergenic | 40.0% | |
| CCATTTGACCCGAATTATTG+CGG | + | chr3_1:35281224-35281243 | Msa0356410:CDS | 40.0% | |
| TACCTCCAAATAACCACCAA+GGG | - | chr3_1:35281274-35281293 | None:intergenic | 40.0% | |
| TTACCTCCAAATAACCACCA+AGG | - | chr3_1:35281275-35281294 | None:intergenic | 40.0% | |
| CGTTCTGCTTCATTTACAGA+GGG | - | chr3_1:35281449-35281468 | None:intergenic | 40.0% | |
| ACGTTCTGCTTCATTTACAG+AGG | - | chr3_1:35281450-35281469 | None:intergenic | 40.0% | |
| GCAGAACGTTACTTCAAGAT+TGG | + | chr3_1:35281461-35281480 | Msa0356410:CDS | 40.0% | |
| AGACTACTTGAAGATGGCTT+TGG | + | chr3_1:35281538-35281557 | Msa0356410:CDS | 40.0% | |
| TAGATGCATGACAACATGCA+TGG | - | chr3_1:35281608-35281627 | None:intergenic | 40.0% | |
| TCTTCGGTATGTATTGTGCA+TGG | + | chr3_1:35281674-35281693 | Msa0356410:three_prime_UTR | 40.0% | |
| CTTCGGTATGTATTGTGCAT+GGG | + | chr3_1:35281675-35281694 | Msa0356410:three_prime_UTR | 40.0% | |
| GTCTGGACGATTACTGCAAA+TGG | - | chr3_1:35281155-35281174 | None:intergenic | 45.0% | |
| CGGGTCAAATGGTGAACAAA+AGG | - | chr3_1:35281216-35281235 | None:intergenic | 45.0% | |
| CCGCAATAATTCGGGTCAAA+TGG | - | chr3_1:35281227-35281246 | None:intergenic | 45.0% | |
| ! | TGTCTCCCTTGGTGGTTATT+TGG | + | chr3_1:35281266-35281285 | Msa0356410:CDS | 45.0% |
| ACTTCCCTTCTTGATGCACT+CGG | - | chr3_1:35281372-35281391 | None:intergenic | 45.0% | |
| AGTGCATCAAGAAGGGAAGT+GGG | + | chr3_1:35281372-35281391 | Msa0356410:CDS | 45.0% | |
| GTCTGGACGATTACTGCAAA+TGG | - | chr3_1:35281155-35281174 | None:intergenic | 45.0% | |
| CGGGTCAAATGGTGAACAAA+AGG | - | chr3_1:35281216-35281235 | None:intergenic | 45.0% | |
| CCGCAATAATTCGGGTCAAA+TGG | - | chr3_1:35281227-35281246 | None:intergenic | 45.0% | |
| ! | TGTCTCCCTTGGTGGTTATT+TGG | + | chr3_1:35281266-35281285 | Msa0356410:CDS | 45.0% |
| ACTTCCCTTCTTGATGCACT+CGG | - | chr3_1:35281372-35281391 | None:intergenic | 45.0% | |
| AGTGCATCAAGAAGGGAAGT+GGG | + | chr3_1:35281372-35281391 | Msa0356410:CDS | 45.0% | |
| CTGCTTCAACGTTCTTCGTC+TGG | - | chr3_1:35281172-35281191 | None:intergenic | 50.0% | |
| AAGATTGTCGCTGTCTCCCT+TGG | + | chr3_1:35281255-35281274 | Msa0356410:CDS | 50.0% | |
| ! | CTCCCTTGGTGGTTATTTGG+AGG | + | chr3_1:35281269-35281288 | Msa0356410:CDS | 50.0% |
| TCATGCCGAGTGCATCAAGA+AGG | + | chr3_1:35281364-35281383 | Msa0356410:CDS | 50.0% | |
| CATGCCGAGTGCATCAAGAA+GGG | + | chr3_1:35281365-35281384 | Msa0356410:CDS | 50.0% | |
| GAGTGCATCAAGAAGGGAAG+TGG | + | chr3_1:35281371-35281390 | Msa0356410:CDS | 50.0% | |
| CTGCTTCAACGTTCTTCGTC+TGG | - | chr3_1:35281172-35281191 | None:intergenic | 50.0% | |
| AAGATTGTCGCTGTCTCCCT+TGG | + | chr3_1:35281255-35281274 | Msa0356410:CDS | 50.0% | |
| ! | CTCCCTTGGTGGTTATTTGG+AGG | + | chr3_1:35281269-35281288 | Msa0356410:CDS | 50.0% |
| TCATGCCGAGTGCATCAAGA+AGG | + | chr3_1:35281364-35281383 | Msa0356410:CDS | 50.0% | |
| CATGCCGAGTGCATCAAGAA+GGG | + | chr3_1:35281365-35281384 | Msa0356410:CDS | 50.0% | |
| GAGTGCATCAAGAAGGGAAG+TGG | + | chr3_1:35281371-35281390 | Msa0356410:CDS | 50.0% | |
| ATTGTCGCTGTCTCCCTTGG+TGG | + | chr3_1:35281258-35281277 | Msa0356410:CDS | 55.0% | |
| ATTGTCGCTGTCTCCCTTGG+TGG | + | chr3_1:35281258-35281277 | Msa0356410:CDS | 55.0% | |
| GCAGCGAGCTGTCCGTATGC+AGG | + | chr3_1:35281188-35281207 | Msa0356410:CDS | 65.0% | |
| GCAGCGAGCTGTCCGTATGC+AGG | + | chr3_1:35281188-35281207 | Msa0356410:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 35280838 | 35281739 | 35280838 | ID=Msa0356410;Name=Msa0356410 |
| chr3_1 | mRNA | 35280838 | 35281739 | 35280838 | ID=Msa0356410-mRNA-1;Parent=Msa0356410;Name=Msa0356410-mRNA-1;_AED=0.04;_eAED=0.04;_QI=58|1|1|1|1|1|2|165|154 |
| chr3_1 | exon | 35280838 | 35280947 | 35280838 | ID=Msa0356410-mRNA-1:exon:6531;Parent=Msa0356410-mRNA-1 |
| chr3_1 | exon | 35281162 | 35281739 | 35281162 | ID=Msa0356410-mRNA-1:exon:6532;Parent=Msa0356410-mRNA-1 |
| chr3_1 | five_prime_UTR | 35280838 | 35280895 | 35280838 | ID=Msa0356410-mRNA-1:five_prime_utr;Parent=Msa0356410-mRNA-1 |
| chr3_1 | CDS | 35280896 | 35280947 | 35280896 | ID=Msa0356410-mRNA-1:cds;Parent=Msa0356410-mRNA-1 |
| chr3_1 | CDS | 35281162 | 35281574 | 35281162 | ID=Msa0356410-mRNA-1:cds;Parent=Msa0356410-mRNA-1 |
| chr3_1 | three_prime_UTR | 35281575 | 35281739 | 35281575 | ID=Msa0356410-mRNA-1:three_prime_utr;Parent=Msa0356410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
