Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356200 | XP_013459315.1 | 74.026 | 154 | 40 | 0 | 1 | 154 | 1 | 154 | 2.14e-79 | 242 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356200 | sp|Q39837|ALB1_SOYBN | 55.263 | 114 | 47 | 2 | 9 | 122 | 1 | 110 | 1.35e-35 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356200 | I3T793 | 74.026 | 154 | 40 | 0 | 1 | 154 | 1 | 154 | 1.02e-79 | 242 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa0356200 | -0.819368 | 1.205091e-52 | -8.615850e-47 |
| Msa0012800 | Msa0356200 | 0.811171 | 8.000157e-51 | -8.615850e-47 |
| Msa0021710 | Msa0356200 | -0.806549 | 7.793835e-50 | -8.615850e-47 |
| Msa0021870 | Msa0356200 | 0.802050 | 6.741688e-49 | -8.615850e-47 |
| Msa0031650 | Msa0356200 | 0.884779 | 1.433016e-71 | -8.615850e-47 |
| Msa0036230 | Msa0356200 | 0.871357 | 7.269632e-67 | -8.615850e-47 |
| Msa0036580 | Msa0356200 | 0.865834 | 4.428682e-65 | -8.615850e-47 |
| Msa0039200 | Msa0356200 | -0.817249 | 3.636087e-52 | -8.615850e-47 |
| Msa0046700 | Msa0356200 | -0.808600 | 2.859605e-50 | -8.615850e-47 |
| Msa0050360 | Msa0356200 | -0.811133 | 8.155116e-51 | -8.615850e-47 |
| Msa0050400 | Msa0356200 | -0.812174 | 4.840895e-51 | -8.615850e-47 |
| Msa0057740 | Msa0356200 | -0.824681 | 7.076358e-54 | -8.615850e-47 |
| Msa0061600 | Msa0356200 | 0.840506 | 8.345547e-58 | -8.615850e-47 |
| Msa0065190 | Msa0356200 | -0.812921 | 3.323942e-51 | -8.615850e-47 |
| Msa0080010 | Msa0356200 | 0.807867 | 4.097136e-50 | -8.615850e-47 |
| Msa0080620 | Msa0356200 | -0.806578 | 7.684656e-50 | -8.615850e-47 |
| Msa0084160 | Msa0356200 | 0.837439 | 5.194358e-57 | -8.615850e-47 |
| Msa0085710 | Msa0356200 | 0.814891 | 1.222596e-51 | -8.615850e-47 |
| Msa0086820 | Msa0356200 | -0.813469 | 2.519685e-51 | -8.615850e-47 |
| Msa0093530 | Msa0356200 | 0.869440 | 3.091811e-66 | -8.615850e-47 |
| Msa0094240 | Msa0356200 | -0.804475 | 2.121930e-49 | -8.615850e-47 |
| Msa0096860 | Msa0356200 | 0.810071 | 1.383070e-50 | -8.615850e-47 |
| Msa0103060 | Msa0356200 | -0.823309 | 1.484269e-53 | -8.615850e-47 |
| Msa0106130 | Msa0356200 | 0.823913 | 1.072040e-53 | -8.615850e-47 |
| Msa0107460 | Msa0356200 | -0.809973 | 1.451900e-50 | -8.615850e-47 |
| Msa0126960 | Msa0356200 | 0.871043 | 9.228416e-67 | -8.615850e-47 |
| Msa0129270 | Msa0356200 | 0.809353 | 1.973682e-50 | -8.615850e-47 |
| Msa0133670 | Msa0356200 | -0.813846 | 2.080993e-51 | -8.615850e-47 |
| Msa0133880 | Msa0356200 | -0.810465 | 1.137022e-50 | -8.615850e-47 |
| Msa0139270 | Msa0356200 | 0.875253 | 3.563373e-68 | -8.615850e-47 |
| Msa0153640 | Msa0356200 | -0.804549 | 2.048264e-49 | -8.615850e-47 |
| Msa0160580 | Msa0356200 | 0.847075 | 1.454665e-59 | -8.615850e-47 |
| Msa0171740 | Msa0356200 | 0.888233 | 7.079093e-73 | -8.615850e-47 |
| Msa0176620 | Msa0356200 | 0.865804 | 4.527357e-65 | -8.615850e-47 |
| Msa0184120 | Msa0356200 | -0.815109 | 1.093730e-51 | -8.615850e-47 |
| Msa0195190 | Msa0356200 | 0.814080 | 1.848220e-51 | -8.615850e-47 |
| Msa0197750 | Msa0356200 | 0.840118 | 1.054277e-57 | -8.615850e-47 |
| Msa0199860 | Msa0356200 | 0.802901 | 4.502901e-49 | -8.615850e-47 |
| Msa0218060 | Msa0356200 | 0.821622 | 3.660800e-53 | -8.615850e-47 |
| Msa0222070 | Msa0356200 | -0.839536 | 1.494462e-57 | -8.615850e-47 |
| Msa0222120 | Msa0356200 | -0.841107 | 5.805012e-58 | -8.615850e-47 |
| Msa0225910 | Msa0356200 | 0.819856 | 9.322445e-53 | -8.615850e-47 |
| Msa0227290 | Msa0356200 | -0.854600 | 1.105109e-61 | -8.615850e-47 |
| Msa0234120 | Msa0356200 | 0.833121 | 6.397062e-56 | -8.615850e-47 |
| Msa0236610 | Msa0356200 | 0.837610 | 4.695050e-57 | -8.615850e-47 |
| Msa0242390 | Msa0356200 | 0.801863 | 7.366766e-49 | -8.615850e-47 |
| Msa0243970 | Msa0356200 | 0.849981 | 2.281005e-60 | -8.615850e-47 |
| Msa0243990 | Msa0356200 | 0.835978 | 1.224805e-56 | -8.615850e-47 |
| Msa0245660 | Msa0356200 | 0.835367 | 1.748803e-56 | -8.615850e-47 |
| Msa0263430 | Msa0356200 | -0.808579 | 2.889310e-50 | -8.615850e-47 |
| Msa0263620 | Msa0356200 | -0.842535 | 2.437202e-58 | -8.615850e-47 |
| Msa0266640 | Msa0356200 | 0.868068 | 8.589049e-66 | -8.615850e-47 |
| Msa0266650 | Msa0356200 | 0.869662 | 2.617622e-66 | -8.615850e-47 |
| Msa0270460 | Msa0356200 | -0.808210 | 3.463473e-50 | -8.615850e-47 |
| Msa0274260 | Msa0356200 | 0.809512 | 1.824294e-50 | -8.615850e-47 |
| Msa0277280 | Msa0356200 | 0.828544 | 8.477315e-55 | -8.615850e-47 |
| Msa0278940 | Msa0356200 | 0.811841 | 5.720478e-51 | -8.615850e-47 |
| Msa0295520 | Msa0356200 | -0.837515 | 4.966632e-57 | -8.615850e-47 |
| Msa0297650 | Msa0356200 | 0.825879 | 3.684979e-54 | -8.615850e-47 |
| Msa0301020 | Msa0356200 | -0.803348 | 3.639010e-49 | -8.615850e-47 |
| Msa0301460 | Msa0356200 | -0.857373 | 1.705538e-62 | -8.615850e-47 |
| Msa0315300 | Msa0356200 | 0.825966 | 3.512877e-54 | -8.615850e-47 |
| Msa0318370 | Msa0356200 | 0.846598 | 1.964566e-59 | -8.615850e-47 |
| Msa0322460 | Msa0356200 | 0.832143 | 1.118465e-55 | -8.615850e-47 |
| Msa0330370 | Msa0356200 | -0.800865 | 1.179365e-48 | -8.615850e-47 |
| Msa0331780 | Msa0356200 | -0.802943 | 4.414244e-49 | -8.615850e-47 |
| Msa0335340 | Msa0356200 | 0.803599 | 3.228748e-49 | -8.615850e-47 |
| Msa0336640 | Msa0356200 | 0.838529 | 2.724054e-57 | -8.615850e-47 |
| Msa0338900 | Msa0356200 | -0.828152 | 1.053556e-54 | -8.615850e-47 |
| Msa0356180 | Msa0356200 | 0.809719 | 1.646392e-50 | -8.615850e-47 |
| Msa0356200 | Msa0356240 | 0.877681 | 5.170970e-69 | -8.615850e-47 |
| Msa0356200 | Msa0356250 | 0.959047 | 5.162180e-117 | -8.615850e-47 |
| Msa0356200 | Msa0356270 | 0.853127 | 2.933613e-61 | -8.615850e-47 |
| Msa0356200 | Msa0356320 | 0.902850 | 6.358167e-79 | -8.615850e-47 |
| Msa0356200 | Msa0356380 | 0.992562 | 4.806567e-194 | -8.615850e-47 |
| Msa0356200 | Msa0356410 | 0.993539 | 1.932418e-200 | -8.615850e-47 |
| Msa0356200 | Msa0369780 | -0.800776 | 1.229603e-48 | -8.615850e-47 |
| Msa0356200 | Msa0373950 | -0.808931 | 2.430000e-50 | -8.615850e-47 |
| Msa0356200 | Msa0375430 | -0.823200 | 1.574508e-53 | -8.615850e-47 |
| Msa0356200 | Msa0377460 | -0.816721 | 4.779668e-52 | -8.615850e-47 |
| Msa0356200 | Msa0378000 | -0.806324 | 8.692251e-50 | -8.615850e-47 |
| Msa0356200 | Msa0379500 | -0.808361 | 3.215895e-50 | -8.615850e-47 |
| Msa0356200 | Msa0389830 | -0.818715 | 1.696478e-52 | -8.615850e-47 |
| Msa0356200 | Msa0393900 | 0.846689 | 1.854993e-59 | -8.615850e-47 |
| Msa0356200 | Msa0396790 | 0.809389 | 1.938231e-50 | -8.615850e-47 |
| Msa0356200 | Msa0403670 | -0.817575 | 3.071866e-52 | -8.615850e-47 |
| Msa0356200 | Msa0404180 | -0.832808 | 7.653185e-56 | -8.615850e-47 |
| Msa0356200 | Msa0405040 | -0.819103 | 1.384800e-52 | -8.615850e-47 |
| Msa0356200 | Msa0409250 | 0.818915 | 1.527639e-52 | -8.615850e-47 |
| Msa0356200 | Msa0409490 | 0.818328 | 2.075815e-52 | -8.615850e-47 |
| Msa0356200 | Msa0414480 | 0.814015 | 1.909999e-51 | -8.615850e-47 |
| Msa0356200 | Msa0415460 | -0.808259 | 3.381623e-50 | -8.615850e-47 |
| Msa0356200 | Msa0417150 | -0.811090 | 8.332122e-51 | -8.615850e-47 |
| Msa0356200 | Msa0418150 | 0.814216 | 1.724498e-51 | -8.615850e-47 |
| Msa0356200 | Msa0421800 | -0.802558 | 5.300310e-49 | -8.615850e-47 |
| Msa0356200 | Msa0423110 | -0.801891 | 7.268850e-49 | -8.615850e-47 |
| Msa0356200 | Msa0424240 | 0.842185 | 3.017382e-58 | -8.615850e-47 |
| Msa0356200 | Msa0426860 | -0.842411 | 2.629476e-58 | -8.615850e-47 |
| Msa0356200 | Msa0426890 | -0.841848 | 3.705420e-58 | -8.615850e-47 |
| Msa0356200 | Msa0444400 | 0.835186 | 1.943287e-56 | -8.615850e-47 |
| Msa0356200 | Msa0445530 | 0.820227 | 7.666921e-53 | -8.615850e-47 |
| Msa0356200 | Msa0449290 | 0.829290 | 5.592196e-55 | -8.615850e-47 |
| Msa0356200 | Msa0449360 | 0.912467 | 1.884521e-83 | -8.615850e-47 |
| Msa0356200 | Msa0449380 | 0.874718 | 5.426539e-68 | -8.615850e-47 |
| Msa0356200 | Msa0449940 | 0.811978 | 5.342839e-51 | -8.615850e-47 |
| Msa0356200 | Msa0453970 | 0.812841 | 3.461196e-51 | -8.615850e-47 |
| Msa0356200 | Msa0456480 | -0.844032 | 9.718595e-59 | -8.615850e-47 |
| Msa0356200 | Msa0463540 | -0.807495 | 4.916941e-50 | -8.615850e-47 |
| Msa0356200 | Msa0463990 | -0.804279 | 2.330873e-49 | -8.615850e-47 |
| Msa0356200 | Msa0464300 | 0.829815 | 4.167703e-55 | -8.615850e-47 |
| Msa0356200 | Msa0464310 | 0.811233 | 7.758141e-51 | -8.615850e-47 |
| Msa0356200 | Msa0466830 | -0.800446 | 1.435906e-48 | -8.615850e-47 |
| Msa0356200 | Msa0467800 | -0.821319 | 4.300025e-53 | -8.615850e-47 |
| Msa0356200 | Msa0467880 | -0.823246 | 1.536033e-53 | -8.615850e-47 |
| Msa0356200 | Msa0471090 | -0.811837 | 5.733836e-51 | -8.615850e-47 |
| Msa0356200 | Msa0473320 | -0.822064 | 2.892809e-53 | -8.615850e-47 |
| Msa0356200 | Msa0478400 | 0.837435 | 5.207146e-57 | -8.615850e-47 |
| Msa0356200 | Msa0482020 | -0.803668 | 3.123220e-49 | -8.615850e-47 |
| Msa0356200 | Msa0487100 | 0.831150 | 1.965030e-55 | -8.615850e-47 |
| Msa0356200 | Msa0491800 | 0.804601 | 1.997189e-49 | -8.615850e-47 |
| Msa0356200 | Msa0491950 | 0.816820 | 4.539769e-52 | -8.615850e-47 |
| Msa0356200 | Msa0493710 | 0.833829 | 4.259449e-56 | -8.615850e-47 |
| Msa0356200 | Msa0498320 | -0.800034 | 1.741133e-48 | -8.615850e-47 |
| Msa0356200 | Msa0509540 | -0.800005 | 1.765068e-48 | -8.615850e-47 |
| Msa0356200 | Msa0513660 | -0.804717 | 1.888802e-49 | -8.615850e-47 |
| Msa0356200 | Msa0514260 | -0.804642 | 1.958824e-49 | -8.615850e-47 |
| Msa0356200 | Msa0515680 | -0.805308 | 1.421521e-49 | -8.615850e-47 |
| Msa0356200 | Msa0515830 | -0.806305 | 8.776437e-50 | -8.615850e-47 |
| Msa0356200 | Msa0517400 | -0.817801 | 2.730918e-52 | -8.615850e-47 |
| Msa0356200 | Msa0528170 | -0.802154 | 6.418517e-49 | -8.615850e-47 |
| Msa0356200 | Msa0531040 | 0.816685 | 4.868475e-52 | -8.615850e-47 |
| Msa0356200 | Msa0531080 | 0.804055 | 2.595175e-49 | -8.615850e-47 |
| Msa0356200 | Msa0532670 | 0.810636 | 1.044487e-50 | -8.615850e-47 |
| Msa0356200 | Msa0532680 | 0.804012 | 2.649196e-49 | -8.615850e-47 |
| Msa0356200 | Msa0533510 | 0.870039 | 1.971421e-66 | -8.615850e-47 |
| Msa0356200 | Msa0533520 | 0.872198 | 3.822404e-67 | -8.615850e-47 |
| Msa0356200 | Msa0538440 | 0.827525 | 1.491423e-54 | -8.615850e-47 |
| Msa0356200 | Msa0538450 | 0.805880 | 1.078043e-49 | -8.615850e-47 |
| Msa0356200 | Msa0538520 | 0.808096 | 3.663038e-50 | -8.615850e-47 |
| Msa0356200 | Msa0538530 | 0.817499 | 3.194731e-52 | -8.615850e-47 |
| Msa0356200 | Msa0548760 | 0.863709 | 2.051222e-64 | -8.615850e-47 |
| Msa0356200 | Msa0549330 | -0.809595 | 1.751179e-50 | -8.615850e-47 |
| Msa0356200 | Msa0549970 | 0.815005 | 1.153753e-51 | -8.615850e-47 |
| Msa0356200 | Msa0553520 | -0.804630 | 1.969799e-49 | -8.615850e-47 |
| Msa0356200 | Msa0554660 | 0.807337 | 5.308961e-50 | -8.615850e-47 |
| Msa0356200 | Msa0558890 | -0.811131 | 8.161140e-51 | -8.615850e-47 |
| Msa0356200 | Msa0589450 | 0.803825 | 2.897700e-49 | -8.615850e-47 |
| Msa0356200 | Msa0589720 | 0.875732 | 2.444123e-68 | -8.615850e-47 |
| Msa0356200 | Msa0589730 | 0.869982 | 2.058390e-66 | -8.615850e-47 |
| Msa0356200 | Msa0589740 | 0.840848 | 6.792295e-58 | -8.615850e-47 |
| Msa0356200 | Msa0589750 | 0.859501 | 3.960775e-63 | -8.615850e-47 |
| Msa0356200 | Msa0591490 | 0.801644 | 8.168726e-49 | -8.615850e-47 |
| Msa0356200 | Msa0594330 | 0.835377 | 1.738327e-56 | -8.615850e-47 |
| Msa0356200 | Msa0595780 | -0.807975 | 3.886246e-50 | -8.615850e-47 |
| Msa0356200 | Msa0599600 | 0.808396 | 3.161082e-50 | -8.615850e-47 |
| Msa0356200 | Msa0600390 | -0.805474 | 1.311598e-49 | -8.615850e-47 |
| Msa0356200 | Msa0603800 | 0.832597 | 8.633027e-56 | -8.615850e-47 |
| Msa0356200 | Msa0605480 | 0.817748 | 2.806967e-52 | -8.615850e-47 |
| Msa0356200 | Msa0606680 | -0.815527 | 8.831005e-52 | -8.615850e-47 |
| Msa0356200 | Msa0621770 | -0.804154 | 2.475222e-49 | -8.615850e-47 |
| Msa0356200 | Msa0623750 | 0.837169 | 6.090918e-57 | -8.615850e-47 |
| Msa0356200 | Msa0630130 | 0.828574 | 8.336117e-55 | -8.615850e-47 |
| Msa0356200 | Msa0634290 | 0.828899 | 6.955804e-55 | -8.615850e-47 |
| Msa0356200 | Msa0635350 | -0.802040 | 6.775331e-49 | -8.615850e-47 |
| Msa0356200 | Msa0635990 | -0.809976 | 1.450040e-50 | -8.615850e-47 |
| Msa0356200 | Msa0638040 | -0.854361 | 1.295271e-61 | -8.615850e-47 |
| Msa0356200 | Msa0640290 | 0.829172 | 5.974035e-55 | -8.615850e-47 |
| Msa0356200 | Msa0640880 | -0.822586 | 2.187993e-53 | -8.615850e-47 |
| Msa0356200 | Msa0645100 | 0.809181 | 2.147862e-50 | -8.615850e-47 |
| Msa0356200 | Msa0645120 | 0.859554 | 3.816034e-63 | -8.615850e-47 |
| Msa0356200 | Msa0646440 | 0.808629 | 2.819172e-50 | -8.615850e-47 |
| Msa0356200 | Msa0653710 | -0.829560 | 4.808734e-55 | -8.615850e-47 |
| Msa0356200 | Msa0654060 | -0.800496 | 1.402413e-48 | -8.615850e-47 |
| Msa0356200 | Msa0668210 | 0.858411 | 8.392529e-63 | -8.615850e-47 |
| Msa0356200 | Msa0668220 | 0.826818 | 2.201235e-54 | -8.615850e-47 |
| Msa0356200 | Msa0668230 | 0.808490 | 3.018554e-50 | -8.615850e-47 |
| Msa0356200 | Msa0672350 | -0.801651 | 8.140920e-49 | -8.615850e-47 |
| Msa0356200 | Msa0672780 | 0.807662 | 4.529550e-50 | -8.615850e-47 |
| Msa0356200 | Msa0677110 | -0.849609 | 2.897607e-60 | -8.615850e-47 |
| Msa0356200 | Msa0678620 | 0.802677 | 5.009171e-49 | -8.615850e-47 |
| Msa0356200 | Msa0684590 | 0.817655 | 2.945948e-52 | -8.615850e-47 |
| Msa0356200 | Msa0684600 | 0.856824 | 2.476973e-62 | -8.615850e-47 |
| Msa0356200 | Msa0688760 | -0.801134 | 1.039109e-48 | -8.615850e-47 |
| Msa0356200 | Msa0698860 | -0.801683 | 8.021854e-49 | -8.615850e-47 |
| Msa0356200 | Msa0698880 | -0.812673 | 3.765525e-51 | -8.615850e-47 |
| Msa0356200 | Msa0698900 | -0.808781 | 2.616586e-50 | -8.615850e-47 |
| Msa0356200 | Msa0715260 | 0.846080 | 2.718823e-59 | -8.615850e-47 |
| Msa0356200 | Msa0716600 | 0.842439 | 2.584692e-58 | -8.615850e-47 |
| Msa0356200 | Msa0718770 | 0.807499 | 4.905112e-50 | -8.615850e-47 |
| Msa0356200 | Msa0719340 | -0.803391 | 3.565737e-49 | -8.615850e-47 |
| Msa0356200 | Msa0729590 | -0.812137 | 4.931354e-51 | -8.615850e-47 |
| Msa0356200 | Msa0730890 | 0.824777 | 6.717837e-54 | -8.615850e-47 |
| Msa0356200 | Msa0739610 | -0.801490 | 8.785612e-49 | -8.615850e-47 |
| Msa0356200 | Msa0747500 | 0.805951 | 1.041781e-49 | -8.615850e-47 |
| Msa0356200 | Msa0757240 | 0.844698 | 6.434954e-59 | -8.615850e-47 |
| Msa0356200 | Msa0758150 | 0.857820 | 1.258068e-62 | -8.615850e-47 |
| Msa0356200 | Msa0766880 | -0.812485 | 4.141454e-51 | -8.615850e-47 |
| Msa0356200 | Msa0771960 | -0.807756 | 4.327232e-50 | -8.615850e-47 |
| Msa0356200 | Msa0776340 | 0.816344 | 5.803046e-52 | -8.615850e-47 |
| Msa0356200 | Msa0776540 | 0.804101 | 2.538783e-49 | -8.615850e-47 |
| Msa0356200 | Msa0782030 | -0.811430 | 7.030305e-51 | -8.615850e-47 |
| Msa0356200 | Msa0793060 | -0.877634 | 5.370785e-69 | -8.615850e-47 |
| Msa0356200 | Msa0797810 | -0.822382 | 2.440387e-53 | -8.615850e-47 |
| Msa0356200 | Msa0798230 | 0.845013 | 5.291347e-59 | -8.615850e-47 |
| Msa0356200 | Msa0813630 | -0.805981 | 1.026619e-49 | -8.615850e-47 |
| Msa0356200 | Msa0816140 | 0.805412 | 1.351779e-49 | -8.615850e-47 |
| Msa0356200 | Msa0817100 | 0.860084 | 2.643387e-63 | -8.615850e-47 |
| Msa0356200 | Msa0822370 | -0.807377 | 5.206557e-50 | -8.615850e-47 |
| Msa0356200 | Msa0824850 | 0.803450 | 3.466263e-49 | -8.615850e-47 |
| Msa0356200 | Msa0824860 | 0.821087 | 4.864972e-53 | -8.615850e-47 |
| Msa0356200 | Msa0833910 | -0.811441 | 6.991469e-51 | -8.615850e-47 |
| Msa0356200 | Msa0834160 | -0.815865 | 7.424325e-52 | -8.615850e-47 |
| Msa0356200 | Msa0836740 | 0.846150 | 2.602798e-59 | -8.615850e-47 |
| Msa0356200 | Msa0844100 | -0.808301 | 3.312387e-50 | -8.615850e-47 |
| Msa0356200 | Msa0854380 | 0.826417 | 2.743805e-54 | -8.615850e-47 |
| Msa0356200 | Msa0863840 | 0.801057 | 1.077589e-48 | -8.615850e-47 |
| Msa0356200 | Msa0868870 | 0.811008 | 8.677904e-51 | -8.615850e-47 |
| Msa0356200 | Msa0883610 | 0.813526 | 2.448217e-51 | -8.615850e-47 |
| Msa0356200 | Msa0886370 | 0.833457 | 5.273749e-56 | -8.615850e-47 |
| Msa0356200 | Msa0896920 | 0.869274 | 3.501575e-66 | -8.615850e-47 |
| Msa0356200 | Msa0896950 | 0.826150 | 3.176643e-54 | -8.615850e-47 |
| Msa0356200 | Msa0896990 | 0.804644 | 1.956419e-49 | -8.615850e-47 |
| Msa0356200 | Msa0902340 | 0.802906 | 4.491545e-49 | -8.615850e-47 |
| Msa0356200 | Msa0910570 | 0.807513 | 4.872457e-50 | -8.615850e-47 |
| Msa0356200 | Msa0910590 | 0.807978 | 3.881141e-50 | -8.615850e-47 |
| Msa0356200 | Msa0913120 | -0.805636 | 1.213358e-49 | -8.615850e-47 |
| Msa0356200 | Msa0913500 | 0.814169 | 1.766376e-51 | -8.615850e-47 |
| Msa0356200 | Msa0932900 | 0.814035 | 1.891389e-51 | -8.615850e-47 |
| Msa0356200 | Msa0932930 | 0.837276 | 5.718803e-57 | -8.615850e-47 |
| Msa0356200 | Msa0933610 | 0.808614 | 2.840551e-50 | -8.615850e-47 |
| Msa0356200 | Msa0949850 | -0.800972 | 1.121382e-48 | -8.615850e-47 |
| Msa0356200 | Msa0950090 | 0.801700 | 7.957512e-49 | -8.615850e-47 |
| Msa0356200 | Msa0950410 | -0.801318 | 9.526564e-49 | -8.615850e-47 |
| Msa0356200 | Msa0951060 | 0.850002 | 2.250258e-60 | -8.615850e-47 |
| Msa0356200 | Msa0962290 | 0.812869 | 3.412003e-51 | -8.615850e-47 |
| Msa0356200 | Msa0964510 | 0.802403 | 5.705118e-49 | -8.615850e-47 |
| Msa0356200 | Msa0967450 | -0.822788 | 1.963596e-53 | -8.615850e-47 |
| Msa0356200 | Msa0970790 | 0.829890 | 3.994938e-55 | -8.615850e-47 |
| Msa0356200 | Msa0971860 | -0.802112 | 6.547297e-49 | -8.615850e-47 |
| Msa0356200 | Msa0985250 | 0.831895 | 1.288035e-55 | -8.615850e-47 |
| Msa0356200 | Msa0985260 | 0.813414 | 2.590790e-51 | -8.615850e-47 |
| Msa0356200 | Msa0985290 | 0.804442 | 2.155615e-49 | -8.615850e-47 |
| Msa0356200 | Msa0986620 | -0.811576 | 6.533304e-51 | -8.615850e-47 |
| Msa0356200 | Msa0987550 | 0.814886 | 1.226062e-51 | -8.615850e-47 |
| Msa0356200 | Msa0992570 | -0.812070 | 5.099892e-51 | -8.615850e-47 |
| Msa0356200 | Msa0992590 | -0.801548 | 8.547462e-49 | -8.615850e-47 |
| Msa0356200 | Msa0996940 | 0.804234 | 2.382498e-49 | -8.615850e-47 |
| Msa0356200 | Msa0996980 | 0.834810 | 2.416268e-56 | -8.615850e-47 |
| Msa0356200 | Msa1001780 | -0.812726 | 3.667812e-51 | -8.615850e-47 |
| Msa0356200 | Msa1006940 | 0.855670 | 5.400053e-62 | -8.615850e-47 |
| Msa0356200 | Msa1024480 | 0.826988 | 2.004854e-54 | -8.615850e-47 |
| Msa0356200 | Msa1024580 | -0.816750 | 4.708549e-52 | -8.615850e-47 |
| Msa0356200 | Msa1030430 | -0.828557 | 8.413413e-55 | -8.615850e-47 |
| Msa0356200 | Msa1033160 | -0.800797 | 1.217834e-48 | -8.615850e-47 |
| Msa0356200 | Msa1036020 | 0.826780 | 2.248279e-54 | -8.615850e-47 |
| Msa0356200 | Msa1046220 | 0.838633 | 2.560420e-57 | -8.615850e-47 |
| Msa0356200 | Msa1061670 | 0.827650 | 1.391318e-54 | -8.615850e-47 |
| Msa0356200 | Msa1061760 | 0.828327 | 9.559320e-55 | -8.615850e-47 |
| Msa0356200 | Msa1064940 | 0.830834 | 2.348491e-55 | -8.615850e-47 |
| Msa0356200 | Msa1069440 | -0.853842 | 1.828491e-61 | -8.615850e-47 |
| Msa0356200 | Msa1074630 | -0.809764 | 1.610662e-50 | -8.615850e-47 |
| Msa0356200 | Msa1076280 | 0.806642 | 7.449289e-50 | -8.615850e-47 |
| Msa0356200 | Msa1079610 | -0.819877 | 9.220656e-53 | -8.615850e-47 |
| Msa0356200 | Msa1083100 | 0.844657 | 6.602302e-59 | -8.615850e-47 |
| Msa0356200 | Msa1087380 | 0.801805 | 7.572542e-49 | -8.615850e-47 |
| Msa0356200 | Msa1099640 | 0.811605 | 6.439184e-51 | -8.615850e-47 |
| Msa0356200 | Msa1100560 | 0.820106 | 8.174413e-53 | -8.615850e-47 |
| Msa0356200 | Msa1103450 | 0.811172 | 7.994489e-51 | -8.615850e-47 |
| Msa0356200 | Msa1106960 | 0.816452 | 5.491062e-52 | -8.615850e-47 |
| Msa0356200 | Msa1107320 | 0.819302 | 1.247094e-52 | -8.615850e-47 |
| Msa0356200 | Msa1110040 | 0.819912 | 9.052605e-53 | -8.615850e-47 |
| Msa0356200 | Msa1112730 | 0.807503 | 4.895869e-50 | -8.615850e-47 |
| Msa0356200 | Msa1124440 | -0.844777 | 6.127937e-59 | -8.615850e-47 |
| Msa0356200 | Msa1126910 | -0.802846 | 4.620618e-49 | -8.615850e-47 |
| Msa0356200 | Msa1127940 | 0.804089 | 2.553820e-49 | -8.615850e-47 |
| Msa0356200 | Msa1130070 | -0.813256 | 2.806861e-51 | -8.615850e-47 |
| Msa0356200 | Msa1136060 | 0.814495 | 1.496861e-51 | -8.615850e-47 |
| Msa0356200 | Msa1138110 | 0.809724 | 1.642229e-50 | -8.615850e-47 |
| Msa0356200 | Msa1138600 | -0.875617 | 2.674642e-68 | -8.615850e-47 |
| Msa0356200 | Msa1150860 | 0.813767 | 2.166445e-51 | -8.615850e-47 |
| Msa0356200 | Msa1150880 | 0.811223 | 7.793585e-51 | -8.615850e-47 |
| Msa0356200 | Msa1160540 | 0.804468 | 2.129454e-49 | -8.615850e-47 |
| Msa0356200 | Msa1161160 | -0.823594 | 1.273407e-53 | -8.615850e-47 |
| Msa0356200 | Msa1165860 | 0.807319 | 5.356799e-50 | -8.615850e-47 |
| Msa0356200 | Msa1168130 | -0.816438 | 5.531341e-52 | -8.615850e-47 |
| Msa0356200 | Msa1173290 | 0.843298 | 1.526959e-58 | -8.615850e-47 |
| Msa0356200 | Msa1173410 | -0.835949 | 1.245488e-56 | -8.615850e-47 |
| Msa0356200 | Msa1175590 | -0.820380 | 7.070543e-53 | -8.615850e-47 |
| Msa0356200 | Msa1179190 | 0.826797 | 2.227745e-54 | -8.615850e-47 |
| Msa0356200 | Msa1190090 | 0.873236 | 1.718865e-67 | -8.615850e-47 |
| Msa0356200 | Msa1190140 | 0.810149 | 1.330484e-50 | -8.615850e-47 |
| Msa0356200 | Msa1198420 | -0.808900 | 2.467466e-50 | -8.615850e-47 |
| Msa0356200 | Msa1199690 | -0.802125 | 6.506688e-49 | -8.615850e-47 |
| Msa0356200 | Msa1206380 | 0.800724 | 1.259863e-48 | -8.615850e-47 |
| Msa0356200 | Msa1209390 | -0.802730 | 4.883190e-49 | -8.615850e-47 |
| Msa0356200 | Msa1209650 | -0.804062 | 2.586450e-49 | -8.615850e-47 |
| Msa0356200 | Msa1211160 | 0.827793 | 1.285431e-54 | -8.615850e-47 |
| Msa0356200 | Msa1211320 | 0.804102 | 2.537194e-49 | -8.615850e-47 |
| Msa0356200 | Msa1216120 | 0.801416 | 9.098179e-49 | -8.615850e-47 |
| Msa0356200 | Msa1216370 | 0.801113 | 1.049260e-48 | -8.615850e-47 |
| Msa0356200 | Msa1219780 | 0.839764 | 1.303645e-57 | -8.615850e-47 |
| Msa0356200 | Msa1221170 | 0.849813 | 2.541402e-60 | -8.615850e-47 |
| Msa0356200 | Msa1233620 | 0.855027 | 8.305779e-62 | -8.615850e-47 |
| Msa0356200 | Msa1235760 | -0.806560 | 7.750655e-50 | -8.615850e-47 |
| Msa0356200 | Msa1235770 | -0.828608 | 8.179164e-55 | -8.615850e-47 |
| Msa0356200 | Msa1246420 | -0.859172 | 4.971744e-63 | -8.615850e-47 |
| Msa0356200 | Msa1258020 | 0.866271 | 3.221385e-65 | -8.615850e-47 |
| Msa0356200 | Msa1263370 | 0.802409 | 5.686966e-49 | -8.615850e-47 |
| Msa0356200 | Msa1265500 | 0.845879 | 3.083422e-59 | -8.615850e-47 |
| Msa0356200 | Msa1266710 | 0.822710 | 2.047495e-53 | -8.615850e-47 |
| Msa0356200 | Msa1275840 | 0.878091 | 3.717784e-69 | -8.615850e-47 |
| Msa0356200 | Msa1287340 | -0.802214 | 6.238570e-49 | -8.615850e-47 |
| Msa0356200 | Msa1298740 | -0.818201 | 2.217997e-52 | -8.615850e-47 |
| Msa0356200 | Msa1299310 | 0.834022 | 3.810726e-56 | -8.615850e-47 |
| Msa0356200 | Msa1303470 | -0.802946 | 4.406537e-49 | -8.615850e-47 |
| Msa0356200 | Msa1309910 | -0.820960 | 5.202791e-53 | -8.615850e-47 |
| Msa0356200 | Msa1314020 | 0.866594 | 2.543941e-65 | -8.615850e-47 |
| Msa0356200 | Msa1322420 | -0.801498 | 8.753251e-49 | -8.615850e-47 |
| Msa0356200 | Msa1323150 | 0.817878 | 2.623938e-52 | -8.615850e-47 |
| Msa0356200 | Msa1323160 | 0.801672 | 8.062984e-49 | -8.615850e-47 |
| Msa0356200 | Msa1329770 | 0.819964 | 8.809790e-53 | -8.615850e-47 |
| Msa0356200 | Msa1335500 | 0.809686 | 1.673863e-50 | -8.615850e-47 |
| Msa0356200 | Msa1339490 | 0.852650 | 4.016614e-61 | -8.615850e-47 |
| Msa0356200 | Msa1350490 | 0.830003 | 3.750117e-55 | -8.615850e-47 |
| Msa0356200 | Msa1355330 | 0.819347 | 1.218158e-52 | -8.615850e-47 |
| Msa0356200 | Msa1362520 | 0.815756 | 7.851778e-52 | -8.615850e-47 |
| Msa0356200 | Msa1363690 | 0.807284 | 5.449997e-50 | -8.615850e-47 |
| Msa0356200 | Msa1364520 | -0.800948 | 1.134048e-48 | -8.615850e-47 |
| Msa0356200 | Msa1370930 | 0.819916 | 9.035164e-53 | -8.615850e-47 |
| Msa0356200 | Msa1377190 | 0.800127 | 1.667246e-48 | -8.615850e-47 |
| Msa0356200 | Msa1378950 | 0.870308 | 1.609964e-66 | -8.615850e-47 |
| Msa0356200 | Msa1379250 | 0.812508 | 4.092008e-51 | -8.615850e-47 |
| Msa0356200 | Msa1379370 | -0.819057 | 1.418432e-52 | -8.615850e-47 |
| Msa0356200 | Msa1382180 | 0.825583 | 4.331314e-54 | -8.615850e-47 |
| Msa0356200 | Msa1384980 | -0.803475 | 3.424361e-49 | -8.615850e-47 |
| Msa0356200 | Msa1388070 | -0.801410 | 9.122829e-49 | -8.615850e-47 |
| Msa0356200 | Msa1390040 | 0.808648 | 2.792932e-50 | -8.615850e-47 |
| Msa0356200 | Msa1393440 | 0.806982 | 6.312276e-50 | -8.615850e-47 |
| Msa0356200 | Msa1395690 | 0.864845 | 9.071963e-65 | -8.615850e-47 |
| Msa0356200 | Msa1396550 | 0.803095 | 4.104418e-49 | -8.615850e-47 |
| Msa0356200 | Msa1401650 | 0.862372 | 5.311376e-64 | -8.615850e-47 |
| Msa0356200 | Msa1406230 | -0.855278 | 7.023697e-62 | -8.615850e-47 |
| Msa0356200 | Msa1407210 | 0.822847 | 1.903197e-53 | -8.615850e-47 |
| Msa0356200 | Msa1409600 | 0.810079 | 1.377936e-50 | -8.615850e-47 |
| Msa0356200 | Msa1411550 | 0.829889 | 3.997724e-55 | -8.615850e-47 |
| Msa0356200 | Msa1413220 | -0.801592 | 8.372668e-49 | -8.615850e-47 |
| Msa0356200 | Msa1417220 | 0.808054 | 3.738490e-50 | -8.615850e-47 |
| Msa0356200 | Msa1423550 | -0.802619 | 5.147821e-49 | -8.615850e-47 |
| Msa0356200 | Msa1432350 | -0.800510 | 1.393094e-48 | -8.615850e-47 |
| Msa0356200 | Msa1435470 | -0.801188 | 1.012973e-48 | -8.615850e-47 |
| Msa0356200 | Msa1441300 | 0.830543 | 2.768112e-55 | -8.615850e-47 |
| Msa0356200 | Msa1445780 | 0.826269 | 2.976715e-54 | -8.615850e-47 |
| Msa0356200 | Msa1445900 | 0.801106 | 1.053040e-48 | -8.615850e-47 |
| Msa0356200 | Msa1448150 | 0.840360 | 9.111582e-58 | -8.615850e-47 |
| Msa0356200 | Msa1452200 | -0.806072 | 9.824159e-50 | -8.615850e-47 |
| Msa0356200 | Msa1452920 | 0.815759 | 7.842605e-52 | -8.615850e-47 |
| Msa0356200 | Msa1453650 | 0.814090 | 1.839306e-51 | -8.615850e-47 |
| Msa0356200 | Msa1456600 | 0.810230 | 1.278226e-50 | -8.615850e-47 |
| Msa0356200 | Msa1458920 | -0.828146 | 1.057414e-54 | -8.615850e-47 |
| Msa0356200 | Msa1459610 | 0.802122 | 6.516685e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356200 | MtrunA17_Chr3g0090571 | 74.026 | 154 | 40 | 0 | 1 | 154 | 1 | 154 | 1.97e-83 | 242 |
| Msa0356200 | MtrunA17_Chr7g0231991 | 55.556 | 135 | 53 | 3 | 23 | 154 | 2 | 132 | 4.02e-47 | 149 |
| Msa0356200 | MtrunA17_Chr7g0232011 | 52.258 | 155 | 63 | 6 | 1 | 154 | 1 | 145 | 2.83e-46 | 147 |
| Msa0356200 | MtrunA17_Chr6g0456951 | 50.000 | 150 | 56 | 6 | 1 | 148 | 1 | 133 | 2.99e-38 | 127 |
| Msa0356200 | MtrunA17_Chr3g0111281 | 45.161 | 155 | 63 | 5 | 1 | 150 | 1 | 138 | 2.48e-36 | 122 |
| Msa0356200 | MtrunA17_Chr3g0111261 | 47.712 | 153 | 58 | 5 | 1 | 150 | 1 | 134 | 7.07e-34 | 115 |
| Msa0356200 | MtrunA17_Chr7g0236791 | 47.143 | 140 | 64 | 6 | 1 | 136 | 1 | 134 | 1.28e-33 | 115 |
| Msa0356200 | MtrunA17_Chr3g0111111 | 40.645 | 155 | 70 | 4 | 1 | 150 | 1 | 138 | 7.38e-33 | 113 |
| Msa0356200 | MtrunA17_Chr8g0344771 | 49.550 | 111 | 53 | 3 | 36 | 145 | 11 | 119 | 9.78e-33 | 112 |
| Msa0356200 | MtrunA17_Chr8g0344791 | 54.902 | 102 | 43 | 3 | 36 | 136 | 11 | 110 | 4.54e-32 | 110 |
| Msa0356200 | MtrunA17_Chr3g0111131 | 45.455 | 132 | 67 | 2 | 1 | 132 | 1 | 127 | 1.64e-31 | 109 |
| Msa0356200 | MtrunA17_Chr3g0111351 | 42.958 | 142 | 67 | 5 | 1 | 137 | 9 | 141 | 1.83e-31 | 110 |
| Msa0356200 | MtrunA17_Chr7g0236801 | 46.429 | 140 | 66 | 6 | 1 | 136 | 1 | 135 | 2.30e-31 | 109 |
| Msa0356200 | MtrunA17_Chr6g0464071 | 43.038 | 158 | 56 | 6 | 1 | 150 | 1 | 132 | 4.22e-30 | 106 |
| Msa0356200 | MtrunA17_Chr3g0111241 | 46.721 | 122 | 55 | 4 | 1 | 119 | 1 | 115 | 1.43e-29 | 104 |
| Msa0356200 | MtrunA17_Chr3g0111071 | 43.165 | 139 | 67 | 6 | 1 | 136 | 1 | 130 | 1.52e-29 | 104 |
| Msa0356200 | MtrunA17_Chr3g0104571 | 42.949 | 156 | 65 | 7 | 1 | 152 | 1 | 136 | 1.61e-29 | 104 |
| Msa0356200 | MtrunA17_Chr6g0468621 | 43.506 | 154 | 66 | 8 | 1 | 153 | 1 | 134 | 1.04e-28 | 102 |
| Msa0356200 | MtrunA17_Chr8g0344801 | 54.444 | 90 | 38 | 3 | 49 | 136 | 7 | 95 | 2.64e-28 | 100 |
| Msa0356200 | MtrunA17_Chr6g0468601 | 41.290 | 155 | 71 | 7 | 1 | 153 | 1 | 137 | 7.36e-28 | 100 |
| Msa0356200 | MtrunA17_Chr3g0111081 | 43.478 | 138 | 68 | 6 | 1 | 136 | 1 | 130 | 1.37e-27 | 100 |
| Msa0356200 | MtrunA17_Chr8g0357331 | 54.321 | 81 | 37 | 0 | 74 | 154 | 21 | 101 | 5.10e-27 | 97.4 |
| Msa0356200 | MtrunA17_Chr6g0456991 | 60.256 | 78 | 29 | 2 | 51 | 127 | 29 | 105 | 1.56e-26 | 96.3 |
| Msa0356200 | MtrunA17_Chr3g0111191 | 39.837 | 123 | 63 | 3 | 1 | 118 | 1 | 117 | 4.12e-24 | 90.5 |
| Msa0356200 | MtrunA17_Chr4g0012121 | 38.750 | 160 | 77 | 5 | 1 | 154 | 1 | 145 | 5.32e-23 | 88.6 |
| Msa0356200 | MtrunA17_Chr3g0111221 | 47.778 | 90 | 42 | 2 | 47 | 134 | 21 | 107 | 8.76e-23 | 87.0 |
| Msa0356200 | MtrunA17_Chr3g0092701 | 64.516 | 62 | 22 | 0 | 1 | 62 | 1 | 62 | 2.37e-22 | 84.3 |
| Msa0356200 | MtrunA17_Chr1g0153591 | 39.370 | 127 | 54 | 3 | 1 | 124 | 1 | 107 | 8.54e-22 | 84.3 |
| Msa0356200 | MtrunA17_Chr7g0225821 | 37.302 | 126 | 71 | 5 | 1 | 124 | 1 | 120 | 8.23e-21 | 82.0 |
| Msa0356200 | MtrunA17_Chr3g0092851 | 63.793 | 58 | 20 | 1 | 1 | 57 | 1 | 58 | 3.09e-20 | 79.3 |
| Msa0356200 | MtrunA17_Chr3g0092881 | 58.571 | 70 | 28 | 1 | 1 | 69 | 1 | 70 | 4.86e-20 | 78.6 |
| Msa0356200 | MtrunA17_Chr3g0092841 | 60.000 | 70 | 27 | 1 | 1 | 69 | 1 | 70 | 8.00e-20 | 78.2 |
| Msa0356200 | MtrunA17_Chr3g0092801 | 60.000 | 70 | 27 | 1 | 1 | 69 | 1 | 70 | 8.00e-20 | 78.2 |
| Msa0356200 | MtrunA17_Chr3g0111311 | 52.326 | 86 | 35 | 4 | 35 | 119 | 10 | 90 | 9.21e-20 | 78.6 |
| Msa0356200 | MtrunA17_Chr8g0359071 | 35.616 | 146 | 70 | 6 | 3 | 144 | 4 | 129 | 4.03e-19 | 78.2 |
| Msa0356200 | MtrunA17_Chr3g0092704 | 63.793 | 58 | 21 | 0 | 1 | 58 | 1 | 58 | 3.97e-18 | 74.3 |
| Msa0356200 | MtrunA17_Chr3g0090581 | 63.265 | 49 | 18 | 0 | 21 | 69 | 22 | 70 | 3.36e-16 | 68.9 |
| Msa0356200 | MtrunA17_Chr3g0092901 | 62.963 | 54 | 19 | 1 | 1 | 54 | 1 | 53 | 4.86e-15 | 65.9 |
| Msa0356200 | MtrunA17_Chr3g0111201 | 49.206 | 63 | 21 | 1 | 88 | 150 | 3 | 54 | 1.33e-14 | 64.3 |
| Msa0356200 | MtrunA17_Chr3g0111711 | 38.843 | 121 | 58 | 6 | 1 | 117 | 1 | 109 | 2.93e-14 | 64.7 |
| Msa0356200 | MtrunA17_Chr3g0092771 | 87.879 | 33 | 4 | 0 | 1 | 33 | 1 | 33 | 2.93e-13 | 60.8 |
| Msa0356200 | MtrunA17_Chr3g0092941 | 78.378 | 37 | 7 | 1 | 1 | 36 | 1 | 37 | 1.09e-11 | 56.6 |
| Msa0356200 | MtrunA17_Chr3g0092731 | 46.032 | 63 | 25 | 1 | 1 | 63 | 1 | 54 | 3.94e-11 | 55.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 41 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCTCCCTTGGTGGTTATT+TGG | 0.237560 | 3_1:+34097396 | Msa0356200:CDS |
| CCTAATGCTGATATTGAATA+TGG | 0.285356 | 3_1:+34097543 | Msa0356200:CDS |
| TTTGTTTCCAATTGATCAAT+TGG | 0.321512 | 3_1:+34097778 | Msa0356200:three_prime_UTR |
| TTGTGATTACCGCAATAATT+CGG | 0.329100 | 3_1:-34097363 | None:intergenic |
| AAGAAATCCAATTGATCAAT+TGG | 0.360164 | 3_1:-34097785 | None:intergenic |
| TTATGTTAAGCTTGCTACTT+TGG | 0.363249 | 3_1:+34097031 | Msa0356200:CDS |
| TGTGATTACCGCAATAATTC+GGG | 0.372686 | 3_1:-34097362 | None:intergenic |
| CTGCTTCAACGTTCTTCGTC+TGG | 0.376847 | 3_1:-34097299 | None:intergenic |
| AGCTTAACATAAGTCATTGT+TGG | 0.383649 | 3_1:-34097020 | None:intergenic |
| AGACTACTTGAAGATGGCTT+TGG | 0.386657 | 3_1:+34097668 | Msa0356200:CDS |
| CTCCCTTGGTGGTTATTTGG+AGG | 0.393690 | 3_1:+34097399 | Msa0356200:CDS |
| GCAGAACGTTACTTCAAGAT+TGG | 0.399752 | 3_1:+34097591 | Msa0356200:CDS |
| ATTGATCAATTGGATTTCTT+CGG | 0.409409 | 3_1:+34097788 | Msa0356200:three_prime_UTR |
| CGAGACATATCATTCTTAAG+TGG | 0.433054 | 3_1:-34097697 | None:intergenic |
| CCATATTCAATATCAGCATT+AGG | 0.437256 | 3_1:-34097543 | None:intergenic |
| CCGCAATAATTCGGGTCAAA+TGG | 0.448213 | 3_1:-34097354 | None:intergenic |
| CGGGTCAAATGGTGAACAAA+AGG | 0.469881 | 3_1:-34097343 | None:intergenic |
| AAGATTGTCGCTGTCTCCCT+TGG | 0.475042 | 3_1:+34097385 | Msa0356200:CDS |
| TCTTCGGTATGTATTGTGCA+TGG | 0.484118 | 3_1:+34097804 | Msa0356200:three_prime_UTR |
| GGTAATTGCATAAATCCAAC+TGG | 0.487242 | 3_1:+34097420 | Msa0356200:CDS |
| ATTGTCGCTGTCTCCCTTGG+TGG | 0.496818 | 3_1:+34097388 | Msa0356200:CDS |
| GAGTGCATCAAGAAGGGAAG+TGG | 0.522512 | 3_1:+34097501 | Msa0356200:CDS |
| CTTCGGTATGTATTGTGCAT+GGG | 0.523431 | 3_1:+34097805 | Msa0356200:three_prime_UTR |
| ATAGTATGTTCAGAACCAGT+TGG | 0.528893 | 3_1:-34097435 | None:intergenic |
| GCAGCGAGCTGTCCGTATGC+AGG | 0.535912 | 3_1:+34097318 | Msa0356200:CDS |
| AATTGATCAATTGGAAACAA+AGG | 0.536616 | 3_1:-34097776 | None:intergenic |
| TCATGCCGAGTGCATCAAGA+AGG | 0.559241 | 3_1:+34097494 | Msa0356200:CDS |
| CGTTCTGCTTCATTTACAGA+GGG | 0.566815 | 3_1:-34097576 | None:intergenic |
| CCATTTGACCCGAATTATTG+CGG | 0.576067 | 3_1:+34097354 | Msa0356200:CDS |
| GAACAAAAGGAACCTGCATA+CGG | 0.576509 | 3_1:-34097330 | None:intergenic |
| ACAAATATACATACAAAATG+TGG | 0.595595 | 3_1:-34097069 | None:intergenic |
| ACTTCCCTTCTTGATGCACT+CGG | 0.605609 | 3_1:-34097499 | None:intergenic |
| TACCTCCAAATAACCACCAA+GGG | 0.606319 | 3_1:-34097401 | None:intergenic |
| CATGCCGAGTGCATCAAGAA+GGG | 0.625240 | 3_1:+34097495 | Msa0356200:CDS |
| ACGTTCTGCTTCATTTACAG+AGG | 0.626101 | 3_1:-34097577 | None:intergenic |
| ATGCTGATATTGAATATGGA+TGG | 0.639133 | 3_1:+34097547 | Msa0356200:CDS |
| AGTGCATCAAGAAGGGAAGT+GGG | 0.648471 | 3_1:+34097502 | Msa0356200:CDS |
| CATGCACATGATAACATGCA+TGG | 0.677543 | 3_1:-34097855 | None:intergenic |
| TTACCTCCAAATAACCACCA+AGG | 0.709136 | 3_1:-34097402 | None:intergenic |
| ACATACTATGAAGATGATCG+AGG | 0.709642 | 3_1:+34097449 | Msa0356200:CDS |
| TAGATGCATGACAACATGCA+TGG | 0.743352 | 3_1:-34097735 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATATAACATATATATTT+AGG | - | chr3_1:34097227-34097246 | None:intergenic | 10.0% |
| !! | TGAATATAACATATATATTT+AGG | - | chr3_1:34097227-34097246 | None:intergenic | 10.0% |
| !! | TCGATATATATTTATATGTT+AGG | + | chr3_1:34097116-34097135 | Msa0356200:intron | 15.0% |
| !! | TCGATATATATTTATATGTT+AGG | + | chr3_1:34097116-34097135 | Msa0356200:intron | 15.0% |
| !! | ACAAATATACATACAAAATG+TGG | - | chr3_1:34097072-34097091 | None:intergenic | 20.0% |
| !! | CATATATATTTAGGAAAGTT+TGG | - | chr3_1:34097218-34097237 | None:intergenic | 20.0% |
| !!! | TGAAGAAATTTTTTACTACA+GGG | - | chr3_1:34097623-34097642 | None:intergenic | 20.0% |
| !!! | TTGAAGAAATTTTTTACTAC+AGG | - | chr3_1:34097624-34097643 | None:intergenic | 20.0% |
| !! | ACAAATATACATACAAAATG+TGG | - | chr3_1:34097072-34097091 | None:intergenic | 20.0% |
| !! | CATATATATTTAGGAAAGTT+TGG | - | chr3_1:34097218-34097237 | None:intergenic | 20.0% |
| !!! | TGAAGAAATTTTTTACTACA+GGG | - | chr3_1:34097623-34097642 | None:intergenic | 20.0% |
| !!! | TTGAAGAAATTTTTTACTAC+AGG | - | chr3_1:34097624-34097643 | None:intergenic | 20.0% |
| ! | TTATATTCACACATGTGTAT+TGG | + | chr3_1:34097238-34097257 | Msa0356200:intron | 25.0% |
| ! | AATTGATCAATTGGAAACAA+AGG | - | chr3_1:34097779-34097798 | None:intergenic | 25.0% |
| ! | TTTGTTTCCAATTGATCAAT+TGG | + | chr3_1:34097778-34097797 | Msa0356200:three_prime_UTR | 25.0% |
| ! | AAGAAATCCAATTGATCAAT+TGG | - | chr3_1:34097788-34097807 | None:intergenic | 25.0% |
| ! | ATTGATCAATTGGATTTCTT+CGG | + | chr3_1:34097788-34097807 | Msa0356200:three_prime_UTR | 25.0% |
| ! | TTATATTCACACATGTGTAT+TGG | + | chr3_1:34097238-34097257 | Msa0356200:intron | 25.0% |
| ! | AATTGATCAATTGGAAACAA+AGG | - | chr3_1:34097779-34097798 | None:intergenic | 25.0% |
| ! | TTTGTTTCCAATTGATCAAT+TGG | + | chr3_1:34097778-34097797 | Msa0356200:three_prime_UTR | 25.0% |
| ! | AAGAAATCCAATTGATCAAT+TGG | - | chr3_1:34097788-34097807 | None:intergenic | 25.0% |
| ! | ATTGATCAATTGGATTTCTT+CGG | + | chr3_1:34097788-34097807 | Msa0356200:three_prime_UTR | 25.0% |
| AGCTTAACATAAGTCATTGT+TGG | - | chr3_1:34097023-34097042 | None:intergenic | 30.0% | |
| !! | TTATGTTAAGCTTGCTACTT+TGG | + | chr3_1:34097031-34097050 | Msa0356200:CDS | 30.0% |
| TTGTGATTACCGCAATAATT+CGG | - | chr3_1:34097366-34097385 | None:intergenic | 30.0% | |
| CCATATTCAATATCAGCATT+AGG | - | chr3_1:34097546-34097565 | None:intergenic | 30.0% | |
| CCTAATGCTGATATTGAATA+TGG | + | chr3_1:34097543-34097562 | Msa0356200:CDS | 30.0% | |
| ATGCTGATATTGAATATGGA+TGG | + | chr3_1:34097547-34097566 | Msa0356200:CDS | 30.0% | |
| !!! | GAAATTTTTTACTACAGGGT+TGG | - | chr3_1:34097619-34097638 | None:intergenic | 30.0% |
| !! | GTCTTTTTCATTAGAGTTTG+AGG | - | chr3_1:34097652-34097671 | None:intergenic | 30.0% |
| TGAAAAAGACTACTTGAAGA+TGG | + | chr3_1:34097662-34097681 | Msa0356200:CDS | 30.0% | |
| AGCTTAACATAAGTCATTGT+TGG | - | chr3_1:34097023-34097042 | None:intergenic | 30.0% | |
| !! | TTATGTTAAGCTTGCTACTT+TGG | + | chr3_1:34097031-34097050 | Msa0356200:CDS | 30.0% |
| TTGTGATTACCGCAATAATT+CGG | - | chr3_1:34097366-34097385 | None:intergenic | 30.0% | |
| CCATATTCAATATCAGCATT+AGG | - | chr3_1:34097546-34097565 | None:intergenic | 30.0% | |
| CCTAATGCTGATATTGAATA+TGG | + | chr3_1:34097543-34097562 | Msa0356200:CDS | 30.0% | |
| ATGCTGATATTGAATATGGA+TGG | + | chr3_1:34097547-34097566 | Msa0356200:CDS | 30.0% | |
| !!! | GAAATTTTTTACTACAGGGT+TGG | - | chr3_1:34097619-34097638 | None:intergenic | 30.0% |
| !! | GTCTTTTTCATTAGAGTTTG+AGG | - | chr3_1:34097652-34097671 | None:intergenic | 30.0% |
| TGAAAAAGACTACTTGAAGA+TGG | + | chr3_1:34097662-34097681 | Msa0356200:CDS | 30.0% | |
| ATGGCAAAGGCAGTTAAAAT+TGG | - | chr3_1:34097266-34097285 | None:intergenic | 35.0% | |
| TGTGATTACCGCAATAATTC+GGG | - | chr3_1:34097365-34097384 | None:intergenic | 35.0% | |
| GGTAATTGCATAAATCCAAC+TGG | + | chr3_1:34097420-34097439 | Msa0356200:CDS | 35.0% | |
| ATAGTATGTTCAGAACCAGT+TGG | - | chr3_1:34097438-34097457 | None:intergenic | 35.0% | |
| ACATACTATGAAGATGATCG+AGG | + | chr3_1:34097449-34097468 | Msa0356200:CDS | 35.0% | |
| ! | GCATGAGTTTTGCATAAGTT+AGG | - | chr3_1:34097480-34097499 | None:intergenic | 35.0% |
| CGAGACATATCATTCTTAAG+TGG | - | chr3_1:34097700-34097719 | None:intergenic | 35.0% | |
| ATGGCAAAGGCAGTTAAAAT+TGG | - | chr3_1:34097266-34097285 | None:intergenic | 35.0% | |
| TGTGATTACCGCAATAATTC+GGG | - | chr3_1:34097365-34097384 | None:intergenic | 35.0% | |
| GGTAATTGCATAAATCCAAC+TGG | + | chr3_1:34097420-34097439 | Msa0356200:CDS | 35.0% | |
| ATAGTATGTTCAGAACCAGT+TGG | - | chr3_1:34097438-34097457 | None:intergenic | 35.0% | |
| ACATACTATGAAGATGATCG+AGG | + | chr3_1:34097449-34097468 | Msa0356200:CDS | 35.0% | |
| ! | GCATGAGTTTTGCATAAGTT+AGG | - | chr3_1:34097480-34097499 | None:intergenic | 35.0% |
| CGAGACATATCATTCTTAAG+TGG | - | chr3_1:34097700-34097719 | None:intergenic | 35.0% | |
| ACGATTACTGCAAATGGCAA+AGG | - | chr3_1:34097279-34097298 | None:intergenic | 40.0% | |
| GAACAAAAGGAACCTGCATA+CGG | - | chr3_1:34097333-34097352 | None:intergenic | 40.0% | |
| CCATTTGACCCGAATTATTG+CGG | + | chr3_1:34097354-34097373 | Msa0356200:CDS | 40.0% | |
| TACCTCCAAATAACCACCAA+GGG | - | chr3_1:34097404-34097423 | None:intergenic | 40.0% | |
| TTACCTCCAAATAACCACCA+AGG | - | chr3_1:34097405-34097424 | None:intergenic | 40.0% | |
| CGTTCTGCTTCATTTACAGA+GGG | - | chr3_1:34097579-34097598 | None:intergenic | 40.0% | |
| ACGTTCTGCTTCATTTACAG+AGG | - | chr3_1:34097580-34097599 | None:intergenic | 40.0% | |
| GCAGAACGTTACTTCAAGAT+TGG | + | chr3_1:34097591-34097610 | Msa0356200:CDS | 40.0% | |
| AGACTACTTGAAGATGGCTT+TGG | + | chr3_1:34097668-34097687 | Msa0356200:CDS | 40.0% | |
| TAGATGCATGACAACATGCA+TGG | - | chr3_1:34097738-34097757 | None:intergenic | 40.0% | |
| TCTTCGGTATGTATTGTGCA+TGG | + | chr3_1:34097804-34097823 | Msa0356200:three_prime_UTR | 40.0% | |
| CTTCGGTATGTATTGTGCAT+GGG | + | chr3_1:34097805-34097824 | Msa0356200:three_prime_UTR | 40.0% | |
| ACGATTACTGCAAATGGCAA+AGG | - | chr3_1:34097279-34097298 | None:intergenic | 40.0% | |
| GAACAAAAGGAACCTGCATA+CGG | - | chr3_1:34097333-34097352 | None:intergenic | 40.0% | |
| CCATTTGACCCGAATTATTG+CGG | + | chr3_1:34097354-34097373 | Msa0356200:CDS | 40.0% | |
| TACCTCCAAATAACCACCAA+GGG | - | chr3_1:34097404-34097423 | None:intergenic | 40.0% | |
| TTACCTCCAAATAACCACCA+AGG | - | chr3_1:34097405-34097424 | None:intergenic | 40.0% | |
| CGTTCTGCTTCATTTACAGA+GGG | - | chr3_1:34097579-34097598 | None:intergenic | 40.0% | |
| ACGTTCTGCTTCATTTACAG+AGG | - | chr3_1:34097580-34097599 | None:intergenic | 40.0% | |
| GCAGAACGTTACTTCAAGAT+TGG | + | chr3_1:34097591-34097610 | Msa0356200:CDS | 40.0% | |
| AGACTACTTGAAGATGGCTT+TGG | + | chr3_1:34097668-34097687 | Msa0356200:CDS | 40.0% | |
| TAGATGCATGACAACATGCA+TGG | - | chr3_1:34097738-34097757 | None:intergenic | 40.0% | |
| TCTTCGGTATGTATTGTGCA+TGG | + | chr3_1:34097804-34097823 | Msa0356200:three_prime_UTR | 40.0% | |
| CTTCGGTATGTATTGTGCAT+GGG | + | chr3_1:34097805-34097824 | Msa0356200:three_prime_UTR | 40.0% | |
| GTCTGGACGATTACTGCAAA+TGG | - | chr3_1:34097285-34097304 | None:intergenic | 45.0% | |
| CGGGTCAAATGGTGAACAAA+AGG | - | chr3_1:34097346-34097365 | None:intergenic | 45.0% | |
| CCGCAATAATTCGGGTCAAA+TGG | - | chr3_1:34097357-34097376 | None:intergenic | 45.0% | |
| ! | TGTCTCCCTTGGTGGTTATT+TGG | + | chr3_1:34097396-34097415 | Msa0356200:CDS | 45.0% |
| ACTTCCCTTCTTGATGCACT+CGG | - | chr3_1:34097502-34097521 | None:intergenic | 45.0% | |
| AGTGCATCAAGAAGGGAAGT+GGG | + | chr3_1:34097502-34097521 | Msa0356200:CDS | 45.0% | |
| GTCTGGACGATTACTGCAAA+TGG | - | chr3_1:34097285-34097304 | None:intergenic | 45.0% | |
| CGGGTCAAATGGTGAACAAA+AGG | - | chr3_1:34097346-34097365 | None:intergenic | 45.0% | |
| CCGCAATAATTCGGGTCAAA+TGG | - | chr3_1:34097357-34097376 | None:intergenic | 45.0% | |
| ! | TGTCTCCCTTGGTGGTTATT+TGG | + | chr3_1:34097396-34097415 | Msa0356200:CDS | 45.0% |
| ACTTCCCTTCTTGATGCACT+CGG | - | chr3_1:34097502-34097521 | None:intergenic | 45.0% | |
| AGTGCATCAAGAAGGGAAGT+GGG | + | chr3_1:34097502-34097521 | Msa0356200:CDS | 45.0% | |
| CTGCTTCAACGTTCTTCGTC+TGG | - | chr3_1:34097302-34097321 | None:intergenic | 50.0% | |
| AAGATTGTCGCTGTCTCCCT+TGG | + | chr3_1:34097385-34097404 | Msa0356200:CDS | 50.0% | |
| ! | CTCCCTTGGTGGTTATTTGG+AGG | + | chr3_1:34097399-34097418 | Msa0356200:CDS | 50.0% |
| TCATGCCGAGTGCATCAAGA+AGG | + | chr3_1:34097494-34097513 | Msa0356200:CDS | 50.0% | |
| CATGCCGAGTGCATCAAGAA+GGG | + | chr3_1:34097495-34097514 | Msa0356200:CDS | 50.0% | |
| GAGTGCATCAAGAAGGGAAG+TGG | + | chr3_1:34097501-34097520 | Msa0356200:CDS | 50.0% | |
| CTGCTTCAACGTTCTTCGTC+TGG | - | chr3_1:34097302-34097321 | None:intergenic | 50.0% | |
| AAGATTGTCGCTGTCTCCCT+TGG | + | chr3_1:34097385-34097404 | Msa0356200:CDS | 50.0% | |
| ! | CTCCCTTGGTGGTTATTTGG+AGG | + | chr3_1:34097399-34097418 | Msa0356200:CDS | 50.0% |
| TCATGCCGAGTGCATCAAGA+AGG | + | chr3_1:34097494-34097513 | Msa0356200:CDS | 50.0% | |
| CATGCCGAGTGCATCAAGAA+GGG | + | chr3_1:34097495-34097514 | Msa0356200:CDS | 50.0% | |
| GAGTGCATCAAGAAGGGAAG+TGG | + | chr3_1:34097501-34097520 | Msa0356200:CDS | 50.0% | |
| ATTGTCGCTGTCTCCCTTGG+TGG | + | chr3_1:34097388-34097407 | Msa0356200:CDS | 55.0% | |
| ATTGTCGCTGTCTCCCTTGG+TGG | + | chr3_1:34097388-34097407 | Msa0356200:CDS | 55.0% | |
| GCAGCGAGCTGTCCGTATGC+AGG | + | chr3_1:34097318-34097337 | Msa0356200:CDS | 65.0% | |
| GCAGCGAGCTGTCCGTATGC+AGG | + | chr3_1:34097318-34097337 | Msa0356200:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 34096968 | 34097869 | 34096968 | ID=Msa0356200;Name=Msa0356200 |
| chr3_1 | mRNA | 34096968 | 34097869 | 34096968 | ID=Msa0356200-mRNA-1;Parent=Msa0356200;Name=Msa0356200-mRNA-1;_AED=0.04;_eAED=0.04;_QI=58|1|1|1|1|1|2|165|154 |
| chr3_1 | exon | 34096968 | 34097077 | 34096968 | ID=Msa0356200-mRNA-1:exon:6481;Parent=Msa0356200-mRNA-1 |
| chr3_1 | exon | 34097292 | 34097869 | 34097292 | ID=Msa0356200-mRNA-1:exon:6482;Parent=Msa0356200-mRNA-1 |
| chr3_1 | five_prime_UTR | 34096968 | 34097025 | 34096968 | ID=Msa0356200-mRNA-1:five_prime_utr;Parent=Msa0356200-mRNA-1 |
| chr3_1 | CDS | 34097026 | 34097077 | 34097026 | ID=Msa0356200-mRNA-1:cds;Parent=Msa0356200-mRNA-1 |
| chr3_1 | CDS | 34097292 | 34097704 | 34097292 | ID=Msa0356200-mRNA-1:cds;Parent=Msa0356200-mRNA-1 |
| chr3_1 | three_prime_UTR | 34097705 | 34097869 | 34097705 | ID=Msa0356200-mRNA-1:three_prime_utr;Parent=Msa0356200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
