Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356250 | XP_013459315.1 | 72.727 | 154 | 42 | 0 | 1 | 154 | 1 | 154 | 3.14e-76 | 234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356250 | sp|Q39837|ALB1_SOYBN | 52.632 | 114 | 50 | 2 | 9 | 122 | 1 | 110 | 1.00e-33 | 117 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356250 | I3T793 | 72.727 | 154 | 42 | 0 | 1 | 154 | 1 | 154 | 1.50e-76 | 234 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa0356250 | -0.812114 | 4.988193e-51 | -8.615850e-47 |
| Msa0012800 | Msa0356250 | 0.810668 | 1.027812e-50 | -8.615850e-47 |
| Msa0012820 | Msa0356250 | 0.811417 | 7.075900e-51 | -8.615850e-47 |
| Msa0031650 | Msa0356250 | 0.871975 | 4.533803e-67 | -8.615850e-47 |
| Msa0036230 | Msa0356250 | 0.873831 | 1.083965e-67 | -8.615850e-47 |
| Msa0036580 | Msa0356250 | 0.872665 | 2.671230e-67 | -8.615850e-47 |
| Msa0039200 | Msa0356250 | -0.804835 | 1.785275e-49 | -8.615850e-47 |
| Msa0057740 | Msa0356250 | -0.805965 | 1.034792e-49 | -8.615850e-47 |
| Msa0061600 | Msa0356250 | 0.847842 | 8.952564e-60 | -8.615850e-47 |
| Msa0065190 | Msa0356250 | -0.813172 | 2.927613e-51 | -8.615850e-47 |
| Msa0074620 | Msa0356250 | 0.808205 | 3.472080e-50 | -8.615850e-47 |
| Msa0080010 | Msa0356250 | 0.802270 | 6.074959e-49 | -8.615850e-47 |
| Msa0080620 | Msa0356250 | -0.802789 | 4.747919e-49 | -8.615850e-47 |
| Msa0084160 | Msa0356250 | 0.846673 | 1.873358e-59 | -8.615850e-47 |
| Msa0085710 | Msa0356250 | 0.829160 | 6.013465e-55 | -8.615850e-47 |
| Msa0086820 | Msa0356250 | -0.801514 | 8.686919e-49 | -8.615850e-47 |
| Msa0093530 | Msa0356250 | 0.863287 | 2.771932e-64 | -8.615850e-47 |
| Msa0103060 | Msa0356250 | -0.806354 | 8.569312e-50 | -8.615850e-47 |
| Msa0106130 | Msa0356250 | 0.830422 | 2.963932e-55 | -8.615850e-47 |
| Msa0107460 | Msa0356250 | -0.807623 | 4.618392e-50 | -8.615850e-47 |
| Msa0126960 | Msa0356250 | 0.865151 | 7.268220e-65 | -8.615850e-47 |
| Msa0129270 | Msa0356250 | 0.825522 | 4.478674e-54 | -8.615850e-47 |
| Msa0133670 | Msa0356250 | -0.802328 | 5.909435e-49 | -8.615850e-47 |
| Msa0139270 | Msa0356250 | 0.879539 | 1.147029e-69 | -8.615850e-47 |
| Msa0160580 | Msa0356250 | 0.820990 | 5.121839e-53 | -8.615850e-47 |
| Msa0170990 | Msa0356250 | 0.800049 | 1.729286e-48 | -8.615850e-47 |
| Msa0171740 | Msa0356250 | 0.869100 | 3.987420e-66 | -8.615850e-47 |
| Msa0176620 | Msa0356250 | 0.869764 | 2.425355e-66 | -8.615850e-47 |
| Msa0184120 | Msa0356250 | -0.803458 | 3.452918e-49 | -8.615850e-47 |
| Msa0195190 | Msa0356250 | 0.803623 | 3.191989e-49 | -8.615850e-47 |
| Msa0197750 | Msa0356250 | 0.834291 | 3.263361e-56 | -8.615850e-47 |
| Msa0218060 | Msa0356250 | 0.827455 | 1.550117e-54 | -8.615850e-47 |
| Msa0222070 | Msa0356250 | -0.822409 | 2.405500e-53 | -8.615850e-47 |
| Msa0222120 | Msa0356250 | -0.824975 | 6.032786e-54 | -8.615850e-47 |
| Msa0225910 | Msa0356250 | 0.817764 | 2.784163e-52 | -8.615850e-47 |
| Msa0227290 | Msa0356250 | -0.833317 | 5.718192e-56 | -8.615850e-47 |
| Msa0234120 | Msa0356250 | 0.820749 | 5.820115e-53 | -8.615850e-47 |
| Msa0236610 | Msa0356250 | 0.823179 | 1.591942e-53 | -8.615850e-47 |
| Msa0242390 | Msa0356250 | 0.801005 | 1.103984e-48 | -8.615850e-47 |
| Msa0243970 | Msa0356250 | 0.849506 | 3.094606e-60 | -8.615850e-47 |
| Msa0243990 | Msa0356250 | 0.827873 | 1.229764e-54 | -8.615850e-47 |
| Msa0245660 | Msa0356250 | 0.837690 | 4.478352e-57 | -8.615850e-47 |
| Msa0263620 | Msa0356250 | -0.826242 | 3.020802e-54 | -8.615850e-47 |
| Msa0266640 | Msa0356250 | 0.860017 | 2.769597e-63 | -8.615850e-47 |
| Msa0266650 | Msa0356250 | 0.860046 | 2.713848e-63 | -8.615850e-47 |
| Msa0267710 | Msa0356250 | 0.825385 | 4.824440e-54 | -8.615850e-47 |
| Msa0270460 | Msa0356250 | -0.801731 | 7.839531e-49 | -8.615850e-47 |
| Msa0274260 | Msa0356250 | 0.809219 | 2.107970e-50 | -8.615850e-47 |
| Msa0277280 | Msa0356250 | 0.821450 | 4.012275e-53 | -8.615850e-47 |
| Msa0278940 | Msa0356250 | 0.819781 | 9.696030e-53 | -8.615850e-47 |
| Msa0295520 | Msa0356250 | -0.828436 | 9.000729e-55 | -8.615850e-47 |
| Msa0297650 | Msa0356250 | 0.814624 | 1.401537e-51 | -8.615850e-47 |
| Msa0298270 | Msa0356250 | 0.807023 | 6.188102e-50 | -8.615850e-47 |
| Msa0301460 | Msa0356250 | -0.842794 | 2.080558e-58 | -8.615850e-47 |
| Msa0315300 | Msa0356250 | 0.814654 | 1.379979e-51 | -8.615850e-47 |
| Msa0318370 | Msa0356250 | 0.843669 | 1.215159e-58 | -8.615850e-47 |
| Msa0322460 | Msa0356250 | 0.819837 | 9.418951e-53 | -8.615850e-47 |
| Msa0335340 | Msa0356250 | 0.803761 | 2.987208e-49 | -8.615850e-47 |
| Msa0336640 | Msa0356250 | 0.832973 | 6.961023e-56 | -8.615850e-47 |
| Msa0338900 | Msa0356250 | -0.830602 | 2.677568e-55 | -8.615850e-47 |
| Msa0356180 | Msa0356250 | 0.817586 | 3.053600e-52 | -8.615850e-47 |
| Msa0356200 | Msa0356250 | 0.959047 | 5.162180e-117 | -8.615850e-47 |
| Msa0356240 | Msa0356250 | 0.869317 | 3.389005e-66 | -8.615850e-47 |
| Msa0356250 | Msa0356270 | 0.848832 | 4.767620e-60 | -8.615850e-47 |
| Msa0356250 | Msa0356320 | 0.901233 | 3.295197e-78 | -8.615850e-47 |
| Msa0356250 | Msa0356360 | 0.809073 | 2.265242e-50 | -8.615850e-47 |
| Msa0356250 | Msa0356380 | 0.950138 | 3.053913e-108 | -8.615850e-47 |
| Msa0356250 | Msa0356410 | 0.954586 | 2.117325e-112 | -8.615850e-47 |
| Msa0356250 | Msa0375430 | -0.812040 | 5.177972e-51 | -8.615850e-47 |
| Msa0356250 | Msa0379500 | -0.801567 | 8.471666e-49 | -8.615850e-47 |
| Msa0356250 | Msa0389830 | -0.814035 | 1.891045e-51 | -8.615850e-47 |
| Msa0356250 | Msa0393900 | 0.844401 | 7.733223e-59 | -8.615850e-47 |
| Msa0356250 | Msa0396700 | 0.803372 | 3.597596e-49 | -8.615850e-47 |
| Msa0356250 | Msa0396790 | 0.806981 | 6.317264e-50 | -8.615850e-47 |
| Msa0356250 | Msa0403670 | -0.808906 | 2.459620e-50 | -8.615850e-47 |
| Msa0356250 | Msa0404180 | -0.826440 | 2.710392e-54 | -8.615850e-47 |
| Msa0356250 | Msa0405040 | -0.811493 | 6.810208e-51 | -8.615850e-47 |
| Msa0356250 | Msa0409250 | 0.815397 | 9.439934e-52 | -8.615850e-47 |
| Msa0356250 | Msa0409490 | 0.807715 | 4.413458e-50 | -8.615850e-47 |
| Msa0356250 | Msa0414480 | 0.813723 | 2.215685e-51 | -8.615850e-47 |
| Msa0356250 | Msa0415460 | -0.803386 | 3.574166e-49 | -8.615850e-47 |
| Msa0356250 | Msa0424240 | 0.832531 | 8.962780e-56 | -8.615850e-47 |
| Msa0356250 | Msa0426860 | -0.818569 | 1.830759e-52 | -8.615850e-47 |
| Msa0356250 | Msa0426890 | -0.815951 | 7.106897e-52 | -8.615850e-47 |
| Msa0356250 | Msa0444400 | 0.842876 | 1.978278e-58 | -8.615850e-47 |
| Msa0356250 | Msa0445530 | 0.825583 | 4.331495e-54 | -8.615850e-47 |
| Msa0356250 | Msa0449290 | 0.834939 | 2.242858e-56 | -8.615850e-47 |
| Msa0356250 | Msa0449360 | 0.908536 | 1.535680e-81 | -8.615850e-47 |
| Msa0356250 | Msa0449380 | 0.856486 | 3.114322e-62 | -8.615850e-47 |
| Msa0356250 | Msa0449940 | 0.801042 | 1.085224e-48 | -8.615850e-47 |
| Msa0356250 | Msa0453970 | 0.809040 | 2.303060e-50 | -8.615850e-47 |
| Msa0356250 | Msa0456480 | -0.833627 | 4.784119e-56 | -8.615850e-47 |
| Msa0356250 | Msa0463540 | -0.803870 | 2.835453e-49 | -8.615850e-47 |
| Msa0356250 | Msa0464300 | 0.812855 | 3.436545e-51 | -8.615850e-47 |
| Msa0356250 | Msa0464310 | 0.810170 | 1.316960e-50 | -8.615850e-47 |
| Msa0356250 | Msa0467800 | -0.808012 | 3.816780e-50 | -8.615850e-47 |
| Msa0356250 | Msa0467880 | -0.809468 | 1.864418e-50 | -8.615850e-47 |
| Msa0356250 | Msa0473320 | -0.804582 | 2.016236e-49 | -8.615850e-47 |
| Msa0356250 | Msa0478400 | 0.827533 | 1.484397e-54 | -8.615850e-47 |
| Msa0356250 | Msa0481050 | -0.814018 | 1.907058e-51 | -8.615850e-47 |
| Msa0356250 | Msa0487100 | 0.825161 | 5.451788e-54 | -8.615850e-47 |
| Msa0356250 | Msa0491800 | 0.808774 | 2.625731e-50 | -8.615850e-47 |
| Msa0356250 | Msa0491950 | 0.813006 | 3.184682e-51 | -8.615850e-47 |
| Msa0356250 | Msa0493710 | 0.850891 | 1.265971e-60 | -8.615850e-47 |
| Msa0356250 | Msa0500490 | -0.802806 | 4.710659e-49 | -8.615850e-47 |
| Msa0356250 | Msa0515830 | -0.801422 | 9.073612e-49 | -8.615850e-47 |
| Msa0356250 | Msa0528170 | -0.807217 | 5.629944e-50 | -8.615850e-47 |
| Msa0356250 | Msa0531030 | 0.805025 | 1.629302e-49 | -8.615850e-47 |
| Msa0356250 | Msa0531040 | 0.808094 | 3.666790e-50 | -8.615850e-47 |
| Msa0356250 | Msa0531080 | 0.809101 | 2.234459e-50 | -8.615850e-47 |
| Msa0356250 | Msa0532670 | 0.820546 | 6.479618e-53 | -8.615850e-47 |
| Msa0356250 | Msa0532680 | 0.817044 | 4.044201e-52 | -8.615850e-47 |
| Msa0356250 | Msa0533510 | 0.859590 | 3.722773e-63 | -8.615850e-47 |
| Msa0356250 | Msa0533520 | 0.863598 | 2.220537e-64 | -8.615850e-47 |
| Msa0356250 | Msa0535570 | 0.816143 | 6.438481e-52 | -8.615850e-47 |
| Msa0356250 | Msa0538440 | 0.807738 | 4.364718e-50 | -8.615850e-47 |
| Msa0356250 | Msa0540640 | 0.806221 | 9.137566e-50 | -8.615850e-47 |
| Msa0356250 | Msa0543740 | 0.805054 | 1.606788e-49 | -8.615850e-47 |
| Msa0356250 | Msa0548760 | 0.861548 | 9.493517e-64 | -8.615850e-47 |
| Msa0356250 | Msa0549330 | -0.832125 | 1.129949e-55 | -8.615850e-47 |
| Msa0356250 | Msa0549970 | 0.820275 | 7.476514e-53 | -8.615850e-47 |
| Msa0356250 | Msa0554660 | 0.815901 | 7.289293e-52 | -8.615850e-47 |
| Msa0356250 | Msa0587920 | 0.806848 | 6.739867e-50 | -8.615850e-47 |
| Msa0356250 | Msa0589450 | 0.820757 | 5.793804e-53 | -8.615850e-47 |
| Msa0356250 | Msa0589720 | 0.866582 | 2.566404e-65 | -8.615850e-47 |
| Msa0356250 | Msa0589730 | 0.864853 | 9.016146e-65 | -8.615850e-47 |
| Msa0356250 | Msa0589740 | 0.829741 | 4.344062e-55 | -8.615850e-47 |
| Msa0356250 | Msa0589750 | 0.847600 | 1.043765e-59 | -8.615850e-47 |
| Msa0356250 | Msa0591490 | 0.805658 | 1.200203e-49 | -8.615850e-47 |
| Msa0356250 | Msa0594330 | 0.820182 | 7.850867e-53 | -8.615850e-47 |
| Msa0356250 | Msa0599600 | 0.819435 | 1.163513e-52 | -8.615850e-47 |
| Msa0356250 | Msa0603800 | 0.823383 | 1.426847e-53 | -8.615850e-47 |
| Msa0356250 | Msa0604280 | 0.800423 | 1.451478e-48 | -8.615850e-47 |
| Msa0356250 | Msa0604640 | -0.808635 | 2.810887e-50 | -8.615850e-47 |
| Msa0356250 | Msa0605460 | 0.808653 | 2.786862e-50 | -8.615850e-47 |
| Msa0356250 | Msa0605480 | 0.825305 | 5.038466e-54 | -8.615850e-47 |
| Msa0356250 | Msa0606680 | -0.800877 | 1.172965e-48 | -8.615850e-47 |
| Msa0356250 | Msa0621770 | -0.805142 | 1.539471e-49 | -8.615850e-47 |
| Msa0356250 | Msa0623750 | 0.843883 | 1.065247e-58 | -8.615850e-47 |
| Msa0356250 | Msa0629720 | 0.803260 | 3.795254e-49 | -8.615850e-47 |
| Msa0356250 | Msa0630130 | 0.820910 | 5.343811e-53 | -8.615850e-47 |
| Msa0356250 | Msa0634290 | 0.815762 | 7.831372e-52 | -8.615850e-47 |
| Msa0356250 | Msa0635350 | -0.800650 | 1.304717e-48 | -8.615850e-47 |
| Msa0356250 | Msa0638040 | -0.834900 | 2.293707e-56 | -8.615850e-47 |
| Msa0356250 | Msa0640290 | 0.810942 | 8.970555e-51 | -8.615850e-47 |
| Msa0356250 | Msa0645100 | 0.821158 | 4.684227e-53 | -8.615850e-47 |
| Msa0356250 | Msa0645120 | 0.860814 | 1.588892e-63 | -8.615850e-47 |
| Msa0356250 | Msa0646040 | 0.801240 | 9.883311e-49 | -8.615850e-47 |
| Msa0356250 | Msa0646440 | 0.816625 | 5.020829e-52 | -8.615850e-47 |
| Msa0356250 | Msa0653710 | -0.812026 | 5.215832e-51 | -8.615850e-47 |
| Msa0356250 | Msa0667640 | 0.803476 | 3.423698e-49 | -8.615850e-47 |
| Msa0356250 | Msa0668210 | 0.857096 | 2.059869e-62 | -8.615850e-47 |
| Msa0356250 | Msa0668220 | 0.823776 | 1.154280e-53 | -8.615850e-47 |
| Msa0356250 | Msa0668230 | 0.817125 | 3.877708e-52 | -8.615850e-47 |
| Msa0356250 | Msa0670360 | 0.808767 | 2.633991e-50 | -8.615850e-47 |
| Msa0356250 | Msa0672780 | 0.825230 | 5.250949e-54 | -8.615850e-47 |
| Msa0356250 | Msa0677110 | -0.832176 | 1.097612e-55 | -8.615850e-47 |
| Msa0356250 | Msa0678620 | 0.808641 | 2.802396e-50 | -8.615850e-47 |
| Msa0356250 | Msa0684590 | 0.823997 | 1.024350e-53 | -8.615850e-47 |
| Msa0356250 | Msa0684600 | 0.851866 | 6.712430e-61 | -8.615850e-47 |
| Msa0356250 | Msa0688760 | -0.806093 | 9.725593e-50 | -8.615850e-47 |
| Msa0356250 | Msa0715260 | 0.838515 | 2.746999e-57 | -8.615850e-47 |
| Msa0356250 | Msa0716600 | 0.846259 | 2.430469e-59 | -8.615850e-47 |
| Msa0356250 | Msa0727480 | 0.801869 | 7.346798e-49 | -8.615850e-47 |
| Msa0356250 | Msa0730890 | 0.848418 | 6.206753e-60 | -8.615850e-47 |
| Msa0356250 | Msa0747500 | 0.810783 | 9.707336e-51 | -8.615850e-47 |
| Msa0356250 | Msa0757240 | 0.835456 | 1.660553e-56 | -8.615850e-47 |
| Msa0356250 | Msa0758150 | 0.858842 | 6.240544e-63 | -8.615850e-47 |
| Msa0356250 | Msa0763350 | -0.802736 | 4.869765e-49 | -8.615850e-47 |
| Msa0356250 | Msa0776340 | 0.825104 | 5.621403e-54 | -8.615850e-47 |
| Msa0356250 | Msa0776540 | 0.801692 | 7.985653e-49 | -8.615850e-47 |
| Msa0356250 | Msa0782030 | -0.813944 | 1.980048e-51 | -8.615850e-47 |
| Msa0356250 | Msa0793060 | -0.865098 | 7.554731e-65 | -8.615850e-47 |
| Msa0356250 | Msa0794090 | 0.807400 | 5.149660e-50 | -8.615850e-47 |
| Msa0356250 | Msa0797810 | -0.826103 | 3.259955e-54 | -8.615850e-47 |
| Msa0356250 | Msa0798230 | 0.840868 | 6.709285e-58 | -8.615850e-47 |
| Msa0356250 | Msa0813630 | -0.817807 | 2.722741e-52 | -8.615850e-47 |
| Msa0356250 | Msa0813840 | 0.806797 | 6.907131e-50 | -8.615850e-47 |
| Msa0356250 | Msa0816140 | 0.805456 | 1.323373e-49 | -8.615850e-47 |
| Msa0356250 | Msa0817100 | 0.863370 | 2.612783e-64 | -8.615850e-47 |
| Msa0356250 | Msa0822370 | -0.803644 | 3.158747e-49 | -8.615850e-47 |
| Msa0356250 | Msa0824850 | 0.809417 | 1.911938e-50 | -8.615850e-47 |
| Msa0356250 | Msa0824860 | 0.828901 | 6.948114e-55 | -8.615850e-47 |
| Msa0356250 | Msa0834160 | -0.801901 | 7.236196e-49 | -8.615850e-47 |
| Msa0356250 | Msa0836740 | 0.834891 | 2.306244e-56 | -8.615850e-47 |
| Msa0356250 | Msa0840890 | -0.803921 | 2.767141e-49 | -8.615850e-47 |
| Msa0356250 | Msa0854380 | 0.843163 | 1.659463e-58 | -8.615850e-47 |
| Msa0356250 | Msa0863840 | 0.807926 | 3.980817e-50 | -8.615850e-47 |
| Msa0356250 | Msa0863850 | 0.805792 | 1.125115e-49 | -8.615850e-47 |
| Msa0356250 | Msa0868870 | 0.802236 | 6.174627e-49 | -8.615850e-47 |
| Msa0356250 | Msa0883610 | 0.834945 | 2.235247e-56 | -8.615850e-47 |
| Msa0356250 | Msa0886370 | 0.827928 | 1.193152e-54 | -8.615850e-47 |
| Msa0356250 | Msa0896920 | 0.863274 | 2.799194e-64 | -8.615850e-47 |
| Msa0356250 | Msa0896950 | 0.814495 | 1.496689e-51 | -8.615850e-47 |
| Msa0356250 | Msa0896990 | 0.806942 | 6.436708e-50 | -8.615850e-47 |
| Msa0356250 | Msa0902340 | 0.821157 | 4.688555e-53 | -8.615850e-47 |
| Msa0356250 | Msa0910570 | 0.814846 | 1.251305e-51 | -8.615850e-47 |
| Msa0356250 | Msa0910590 | 0.809768 | 1.606802e-50 | -8.615850e-47 |
| Msa0356250 | Msa0913120 | -0.822061 | 2.896999e-53 | -8.615850e-47 |
| Msa0356250 | Msa0913500 | 0.804428 | 2.170847e-49 | -8.615850e-47 |
| Msa0356250 | Msa0932900 | 0.801317 | 9.534487e-49 | -8.615850e-47 |
| Msa0356250 | Msa0932930 | 0.839530 | 1.499588e-57 | -8.615850e-47 |
| Msa0356250 | Msa0941120 | 0.807137 | 5.855626e-50 | -8.615850e-47 |
| Msa0356250 | Msa0950410 | -0.816500 | 5.355208e-52 | -8.615850e-47 |
| Msa0356250 | Msa0951060 | 0.843318 | 1.508554e-58 | -8.615850e-47 |
| Msa0356250 | Msa0962290 | 0.817360 | 3.433437e-52 | -8.615850e-47 |
| Msa0356250 | Msa0964510 | 0.802830 | 4.656420e-49 | -8.615850e-47 |
| Msa0356250 | Msa0967450 | -0.814292 | 1.659790e-51 | -8.615850e-47 |
| Msa0356250 | Msa0970790 | 0.828475 | 8.807448e-55 | -8.615850e-47 |
| Msa0356250 | Msa0985250 | 0.844189 | 8.820828e-59 | -8.615850e-47 |
| Msa0356250 | Msa0985260 | 0.820812 | 5.627968e-53 | -8.615850e-47 |
| Msa0356250 | Msa0985290 | 0.816280 | 5.998835e-52 | -8.615850e-47 |
| Msa0356250 | Msa0986620 | -0.814631 | 1.396482e-51 | -8.615850e-47 |
| Msa0356250 | Msa0987550 | 0.806554 | 7.773875e-50 | -8.615850e-47 |
| Msa0356250 | Msa0996940 | 0.815225 | 1.030788e-51 | -8.615850e-47 |
| Msa0356250 | Msa0996980 | 0.824483 | 7.877531e-54 | -8.615850e-47 |
| Msa0356250 | Msa1006940 | 0.859874 | 3.058515e-63 | -8.615850e-47 |
| Msa0356250 | Msa1024480 | 0.823867 | 1.099112e-53 | -8.615850e-47 |
| Msa0356250 | Msa1030430 | -0.821126 | 4.764395e-53 | -8.615850e-47 |
| Msa0356250 | Msa1036020 | 0.831666 | 1.466968e-55 | -8.615850e-47 |
| Msa0356250 | Msa1046220 | 0.835898 | 1.283203e-56 | -8.615850e-47 |
| Msa0356250 | Msa1061670 | 0.832580 | 8.715578e-56 | -8.615850e-47 |
| Msa0356250 | Msa1061760 | 0.846696 | 1.846696e-59 | -8.615850e-47 |
| Msa0356250 | Msa1064940 | 0.829948 | 3.867130e-55 | -8.615850e-47 |
| Msa0356250 | Msa1067910 | -0.800045 | 1.732714e-48 | -8.615850e-47 |
| Msa0356250 | Msa1069440 | -0.848784 | 4.914910e-60 | -8.615850e-47 |
| Msa0356250 | Msa1076280 | 0.817278 | 3.583621e-52 | -8.615850e-47 |
| Msa0356250 | Msa1079610 | -0.812577 | 3.952448e-51 | -8.615850e-47 |
| Msa0356250 | Msa1083100 | 0.844882 | 5.739805e-59 | -8.615850e-47 |
| Msa0356250 | Msa1087200 | 0.805227 | 1.477576e-49 | -8.615850e-47 |
| Msa0356250 | Msa1087380 | 0.800367 | 1.489924e-48 | -8.615850e-47 |
| Msa0356250 | Msa1099640 | 0.813318 | 2.720227e-51 | -8.615850e-47 |
| Msa0356250 | Msa1100560 | 0.829631 | 4.620197e-55 | -8.615850e-47 |
| Msa0356250 | Msa1103450 | 0.815158 | 1.067106e-51 | -8.615850e-47 |
| Msa0356250 | Msa1106960 | 0.821792 | 3.344962e-53 | -8.615850e-47 |
| Msa0356250 | Msa1107320 | 0.822896 | 1.853116e-53 | -8.615850e-47 |
| Msa0356250 | Msa1110040 | 0.807927 | 3.978421e-50 | -8.615850e-47 |
| Msa0356250 | Msa1112730 | 0.823506 | 1.335206e-53 | -8.615850e-47 |
| Msa0356250 | Msa1124440 | -0.819587 | 1.073826e-52 | -8.615850e-47 |
| Msa0356250 | Msa1127940 | 0.802023 | 6.828633e-49 | -8.615850e-47 |
| Msa0356250 | Msa1130070 | -0.811187 | 7.936494e-51 | -8.615850e-47 |
| Msa0356250 | Msa1130730 | -0.801650 | 8.147579e-49 | -8.615850e-47 |
| Msa0356250 | Msa1136060 | 0.811593 | 6.479274e-51 | -8.615850e-47 |
| Msa0356250 | Msa1138110 | 0.818542 | 1.856709e-52 | -8.615850e-47 |
| Msa0356250 | Msa1138600 | -0.863386 | 2.584046e-64 | -8.615850e-47 |
| Msa0356250 | Msa1140940 | -0.801105 | 1.053152e-48 | -8.615850e-47 |
| Msa0356250 | Msa1150860 | 0.842208 | 2.975339e-58 | -8.615850e-47 |
| Msa0356250 | Msa1150880 | 0.833214 | 6.064614e-56 | -8.615850e-47 |
| Msa0356250 | Msa1155630 | 0.805768 | 1.138042e-49 | -8.615850e-47 |
| Msa0356250 | Msa1157310 | -0.806658 | 7.391434e-50 | -8.615850e-47 |
| Msa0356250 | Msa1160540 | 0.808933 | 2.427851e-50 | -8.615850e-47 |
| Msa0356250 | Msa1161160 | -0.815117 | 1.089778e-51 | -8.615850e-47 |
| Msa0356250 | Msa1165860 | 0.804188 | 2.435670e-49 | -8.615850e-47 |
| Msa0356250 | Msa1168130 | -0.802898 | 4.508136e-49 | -8.615850e-47 |
| Msa0356250 | Msa1173290 | 0.835789 | 1.367752e-56 | -8.615850e-47 |
| Msa0356250 | Msa1173410 | -0.816310 | 5.905824e-52 | -8.615850e-47 |
| Msa0356250 | Msa1175590 | -0.816401 | 5.636471e-52 | -8.615850e-47 |
| Msa0356250 | Msa1179190 | 0.824294 | 8.725330e-54 | -8.615850e-47 |
| Msa0356250 | Msa1190090 | 0.847980 | 8.203465e-60 | -8.615850e-47 |
| Msa0356250 | Msa1190140 | 0.801400 | 9.167304e-49 | -8.615850e-47 |
| Msa0356250 | Msa1206380 | 0.801612 | 8.294780e-49 | -8.615850e-47 |
| Msa0356250 | Msa1211160 | 0.836869 | 7.266628e-57 | -8.615850e-47 |
| Msa0356250 | Msa1211320 | 0.815192 | 1.048414e-51 | -8.615850e-47 |
| Msa0356250 | Msa1214900 | -0.802121 | 6.519375e-49 | -8.615850e-47 |
| Msa0356250 | Msa1216120 | 0.807822 | 4.189415e-50 | -8.615850e-47 |
| Msa0356250 | Msa1216370 | 0.811125 | 8.187920e-51 | -8.615850e-47 |
| Msa0356250 | Msa1219780 | 0.844176 | 8.890602e-59 | -8.615850e-47 |
| Msa0356250 | Msa1221170 | 0.855987 | 4.360862e-62 | -8.615850e-47 |
| Msa0356250 | Msa1222030 | 0.808319 | 3.283292e-50 | -8.615850e-47 |
| Msa0356250 | Msa1233620 | 0.843795 | 1.125017e-58 | -8.615850e-47 |
| Msa0356250 | Msa1233650 | 0.818151 | 2.276924e-52 | -8.615850e-47 |
| Msa0356250 | Msa1235760 | -0.805979 | 1.027878e-49 | -8.615850e-47 |
| Msa0356250 | Msa1235770 | -0.820817 | 5.612660e-53 | -8.615850e-47 |
| Msa0356250 | Msa1246420 | -0.846339 | 2.311141e-59 | -8.615850e-47 |
| Msa0356250 | Msa1258020 | 0.842393 | 2.658521e-58 | -8.615850e-47 |
| Msa0356250 | Msa1263000 | 0.800449 | 1.433833e-48 | -8.615850e-47 |
| Msa0356250 | Msa1263370 | 0.806258 | 8.977299e-50 | -8.615850e-47 |
| Msa0356250 | Msa1265500 | 0.846351 | 2.293873e-59 | -8.615850e-47 |
| Msa0356250 | Msa1266710 | 0.826515 | 2.601130e-54 | -8.615850e-47 |
| Msa0356250 | Msa1275840 | 0.862377 | 5.292619e-64 | -8.615850e-47 |
| Msa0356250 | Msa1275870 | 0.803985 | 2.684062e-49 | -8.615850e-47 |
| Msa0356250 | Msa1299310 | 0.837259 | 5.776657e-57 | -8.615850e-47 |
| Msa0356250 | Msa1314020 | 0.850306 | 1.849357e-60 | -8.615850e-47 |
| Msa0356250 | Msa1323150 | 0.823926 | 1.064494e-53 | -8.615850e-47 |
| Msa0356250 | Msa1329770 | 0.829456 | 5.095613e-55 | -8.615850e-47 |
| Msa0356250 | Msa1335500 | 0.817274 | 3.590021e-52 | -8.615850e-47 |
| Msa0356250 | Msa1336100 | 0.815529 | 8.823505e-52 | -8.615850e-47 |
| Msa0356250 | Msa1339490 | 0.853796 | 1.885422e-61 | -8.615850e-47 |
| Msa0356250 | Msa1350490 | 0.833005 | 6.835920e-56 | -8.615850e-47 |
| Msa0356250 | Msa1362520 | 0.816438 | 5.531410e-52 | -8.615850e-47 |
| Msa0356250 | Msa1363690 | 0.813594 | 2.365246e-51 | -8.615850e-47 |
| Msa0356250 | Msa1370930 | 0.826016 | 3.418200e-54 | -8.615850e-47 |
| Msa0356250 | Msa1373560 | 0.800820 | 1.204667e-48 | -8.615850e-47 |
| Msa0356250 | Msa1377190 | 0.819352 | 1.214915e-52 | -8.615850e-47 |
| Msa0356250 | Msa1378950 | 0.869211 | 3.668895e-66 | -8.615850e-47 |
| Msa0356250 | Msa1379250 | 0.800829 | 1.199572e-48 | -8.615850e-47 |
| Msa0356250 | Msa1379370 | -0.811248 | 7.698837e-51 | -8.615850e-47 |
| Msa0356250 | Msa1382180 | 0.814240 | 1.704285e-51 | -8.615850e-47 |
| Msa0356250 | Msa1384980 | -0.809514 | 1.822828e-50 | -8.615850e-47 |
| Msa0356250 | Msa1390040 | 0.824912 | 6.240428e-54 | -8.615850e-47 |
| Msa0356250 | Msa1393440 | 0.807653 | 4.551500e-50 | -8.615850e-47 |
| Msa0356250 | Msa1395690 | 0.867075 | 1.787398e-65 | -8.615850e-47 |
| Msa0356250 | Msa1396550 | 0.812018 | 5.234641e-51 | -8.615850e-47 |
| Msa0356250 | Msa1401650 | 0.836140 | 1.114072e-56 | -8.615850e-47 |
| Msa0356250 | Msa1406230 | -0.843353 | 1.475931e-58 | -8.615850e-47 |
| Msa0356250 | Msa1407210 | 0.830388 | 3.019751e-55 | -8.615850e-47 |
| Msa0356250 | Msa1409600 | 0.821972 | 3.038741e-53 | -8.615850e-47 |
| Msa0356250 | Msa1411550 | 0.840560 | 8.077910e-58 | -8.615850e-47 |
| Msa0356250 | Msa1417220 | 0.811103 | 8.275275e-51 | -8.615850e-47 |
| Msa0356250 | Msa1423550 | -0.800890 | 1.165414e-48 | -8.615850e-47 |
| Msa0356250 | Msa1432350 | -0.805617 | 1.224195e-49 | -8.615850e-47 |
| Msa0356250 | Msa1441300 | 0.821149 | 4.708556e-53 | -8.615850e-47 |
| Msa0356250 | Msa1445780 | 0.843185 | 1.636335e-58 | -8.615850e-47 |
| Msa0356250 | Msa1448150 | 0.829666 | 4.531663e-55 | -8.615850e-47 |
| Msa0356250 | Msa1451660 | 0.801979 | 6.974352e-49 | -8.615850e-47 |
| Msa0356250 | Msa1451690 | -0.802972 | 4.353589e-49 | -8.615850e-47 |
| Msa0356250 | Msa1452200 | -0.828266 | 9.891079e-55 | -8.615850e-47 |
| Msa0356250 | Msa1452920 | 0.828634 | 8.060379e-55 | -8.615850e-47 |
| Msa0356250 | Msa1453650 | 0.812717 | 3.683113e-51 | -8.615850e-47 |
| Msa0356250 | Msa1456600 | 0.802727 | 4.890353e-49 | -8.615850e-47 |
| Msa0356250 | Msa1458920 | -0.813873 | 2.053072e-51 | -8.615850e-47 |
| Msa0356250 | Msa1459610 | 0.804689 | 1.914573e-49 | -8.615850e-47 |
| Msa0356250 | Msa1463820 | 0.808559 | 2.917929e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356250 | MtrunA17_Chr3g0090571 | 72.727 | 154 | 42 | 0 | 1 | 154 | 1 | 154 | 2.89e-80 | 234 |
| Msa0356250 | MtrunA17_Chr7g0231991 | 54.032 | 124 | 54 | 2 | 34 | 154 | 9 | 132 | 5.46e-42 | 136 |
| Msa0356250 | MtrunA17_Chr7g0232011 | 49.677 | 155 | 67 | 6 | 1 | 154 | 1 | 145 | 1.49e-40 | 133 |
| Msa0356250 | MtrunA17_Chr6g0456951 | 47.552 | 143 | 66 | 6 | 1 | 140 | 1 | 137 | 6.39e-35 | 118 |
| Msa0356250 | MtrunA17_Chr3g0111131 | 50.000 | 136 | 55 | 5 | 1 | 132 | 1 | 127 | 9.68e-35 | 117 |
| Msa0356250 | MtrunA17_Chr3g0111281 | 45.161 | 155 | 63 | 5 | 1 | 150 | 1 | 138 | 4.97e-34 | 116 |
| Msa0356250 | MtrunA17_Chr3g0111111 | 40.764 | 157 | 67 | 5 | 1 | 150 | 1 | 138 | 1.78e-33 | 115 |
| Msa0356250 | MtrunA17_Chr7g0236791 | 45.255 | 137 | 71 | 2 | 1 | 136 | 1 | 134 | 1.10e-32 | 112 |
| Msa0356250 | MtrunA17_Chr7g0236801 | 46.043 | 139 | 68 | 5 | 1 | 136 | 1 | 135 | 7.59e-31 | 108 |
| Msa0356250 | MtrunA17_Chr6g0468621 | 43.506 | 154 | 66 | 8 | 1 | 153 | 1 | 134 | 1.20e-29 | 105 |
| Msa0356250 | MtrunA17_Chr3g0111261 | 45.098 | 153 | 62 | 6 | 1 | 150 | 1 | 134 | 1.59e-29 | 104 |
| Msa0356250 | MtrunA17_Chr3g0111071 | 42.336 | 137 | 71 | 4 | 1 | 136 | 1 | 130 | 3.91e-29 | 103 |
| Msa0356250 | MtrunA17_Chr3g0111241 | 45.902 | 122 | 56 | 4 | 1 | 119 | 1 | 115 | 4.84e-29 | 103 |
| Msa0356250 | MtrunA17_Chr6g0464071 | 43.243 | 148 | 66 | 5 | 1 | 148 | 1 | 130 | 6.72e-29 | 103 |
| Msa0356250 | MtrunA17_Chr3g0111081 | 43.066 | 137 | 70 | 4 | 1 | 136 | 1 | 130 | 3.28e-28 | 101 |
| Msa0356250 | MtrunA17_Chr8g0344771 | 47.273 | 110 | 55 | 3 | 37 | 145 | 12 | 119 | 4.38e-28 | 100 |
| Msa0356250 | MtrunA17_Chr8g0344791 | 52.475 | 101 | 45 | 3 | 37 | 136 | 12 | 110 | 5.17e-28 | 100 |
| Msa0356250 | MtrunA17_Chr3g0111351 | 40.000 | 140 | 74 | 4 | 1 | 137 | 9 | 141 | 1.78e-27 | 99.8 |
| Msa0356250 | MtrunA17_Chr6g0468601 | 40.714 | 140 | 72 | 6 | 1 | 136 | 1 | 133 | 2.13e-27 | 99.4 |
| Msa0356250 | MtrunA17_Chr3g0104571 | 41.558 | 154 | 70 | 7 | 1 | 152 | 1 | 136 | 2.36e-27 | 99.4 |
| Msa0356250 | MtrunA17_Chr8g0344801 | 52.809 | 89 | 39 | 3 | 50 | 136 | 8 | 95 | 1.49e-26 | 96.3 |
| Msa0356250 | MtrunA17_Chr8g0357331 | 53.086 | 81 | 38 | 0 | 74 | 154 | 21 | 101 | 1.65e-26 | 96.3 |
| Msa0356250 | MtrunA17_Chr3g0111191 | 41.600 | 125 | 58 | 4 | 1 | 118 | 1 | 117 | 5.63e-26 | 95.1 |
| Msa0356250 | MtrunA17_Chr6g0456991 | 50.943 | 106 | 46 | 4 | 23 | 127 | 5 | 105 | 8.93e-26 | 94.4 |
| Msa0356250 | MtrunA17_Chr3g0092701 | 68.182 | 66 | 20 | 1 | 1 | 65 | 1 | 66 | 2.98e-23 | 86.7 |
| Msa0356250 | MtrunA17_Chr3g0111221 | 48.315 | 89 | 37 | 2 | 50 | 134 | 24 | 107 | 6.90e-23 | 87.4 |
| Msa0356250 | MtrunA17_Chr1g0153591 | 41.129 | 124 | 56 | 5 | 1 | 124 | 1 | 107 | 6.24e-22 | 84.7 |
| Msa0356250 | MtrunA17_Chr3g0092881 | 62.857 | 70 | 25 | 1 | 1 | 69 | 1 | 70 | 6.58e-22 | 83.6 |
| Msa0356250 | MtrunA17_Chr3g0092841 | 61.429 | 70 | 26 | 1 | 1 | 69 | 1 | 70 | 2.17e-21 | 82.0 |
| Msa0356250 | MtrunA17_Chr3g0092801 | 61.429 | 70 | 26 | 1 | 1 | 69 | 1 | 70 | 2.17e-21 | 82.0 |
| Msa0356250 | MtrunA17_Chr4g0012121 | 39.375 | 160 | 76 | 5 | 1 | 154 | 1 | 145 | 5.69e-21 | 83.2 |
| Msa0356250 | MtrunA17_Chr7g0225821 | 37.405 | 131 | 64 | 5 | 1 | 124 | 1 | 120 | 1.10e-20 | 82.0 |
| Msa0356250 | MtrunA17_Chr3g0092704 | 83.721 | 43 | 7 | 0 | 1 | 43 | 1 | 43 | 3.45e-19 | 77.0 |
| Msa0356250 | MtrunA17_Chr3g0111311 | 67.391 | 46 | 15 | 0 | 74 | 119 | 45 | 90 | 5.65e-19 | 76.6 |
| Msa0356250 | MtrunA17_Chr3g0092851 | 61.765 | 68 | 23 | 2 | 1 | 65 | 1 | 68 | 4.73e-18 | 73.6 |
| Msa0356250 | MtrunA17_Chr8g0359071 | 34.286 | 140 | 68 | 5 | 3 | 132 | 4 | 129 | 2.01e-17 | 73.9 |
| Msa0356250 | MtrunA17_Chr3g0092901 | 58.209 | 67 | 25 | 2 | 1 | 65 | 1 | 66 | 2.33e-16 | 69.3 |
| Msa0356250 | MtrunA17_Chr3g0111711 | 38.532 | 109 | 57 | 3 | 1 | 105 | 1 | 103 | 7.96e-16 | 68.9 |
| Msa0356250 | MtrunA17_Chr3g0092771 | 93.750 | 32 | 2 | 0 | 1 | 32 | 1 | 32 | 1.11e-14 | 64.3 |
| Msa0356250 | MtrunA17_Chr3g0111201 | 49.206 | 63 | 21 | 1 | 88 | 150 | 3 | 54 | 1.45e-14 | 64.3 |
| Msa0356250 | MtrunA17_Chr3g0090581 | 63.265 | 49 | 18 | 0 | 21 | 69 | 22 | 70 | 2.83e-13 | 61.2 |
| Msa0356250 | MtrunA17_Chr3g0092941 | 83.333 | 36 | 5 | 1 | 1 | 35 | 1 | 36 | 8.54e-13 | 59.7 |
| Msa0356250 | MtrunA17_Chr6g0483481 | 39.316 | 117 | 53 | 6 | 23 | 130 | 5 | 112 | 1.03e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 43 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCATGGATTCGGGTAAAA+TGG | 0.201932 | 3_1:-34226824 | None:intergenic |
| CCTAATGCTGATATTGAATA+TGG | 0.285356 | 3_1:+34227013 | Msa0356250:CDS |
| TCTGTTTCCAATTGATCAAT+TGG | 0.319029 | 3_1:+34227249 | Msa0356250:three_prime_UTR |
| TGACTACTTGAAGATGGATT+TGG | 0.323493 | 3_1:+34227138 | Msa0356250:CDS |
| AAGAAATCCAATTGATCAAT+TGG | 0.360164 | 3_1:-34227256 | None:intergenic |
| TTATGTTAAGCTTGCTACTT+TGG | 0.363249 | 3_1:+34226502 | Msa0356250:CDS |
| ATGATATGGCCGCATGGATT+CGG | 0.366116 | 3_1:-34226833 | None:intergenic |
| CGCATGGATTCGGGTAAAAT+GGG | 0.368560 | 3_1:-34226823 | None:intergenic |
| GTCCCTTGGGCATCATTGTT+TGG | 0.376143 | 3_1:+34226869 | Msa0356250:CDS |
| CTGCTTCAACGTTCTTCGTC+TGG | 0.376847 | 3_1:-34226769 | None:intergenic |
| TGATATGGCCGCATGGATTC+GGG | 0.382039 | 3_1:-34226832 | None:intergenic |
| CACAACGACAATCTATGATA+TGG | 0.388432 | 3_1:-34226847 | None:intergenic |
| TAGATTGTCGTTGTGTCCCT+TGG | 0.396439 | 3_1:+34226855 | Msa0356250:CDS |
| GCAGAACGTTACTTCAAGAT+TGG | 0.399752 | 3_1:+34227061 | Msa0356250:CDS |
| ATTGATCAATTGGATTTCTT+CGG | 0.409409 | 3_1:+34227259 | Msa0356250:three_prime_UTR |
| GGTATTTGCCTAAGTCCAAC+TGG | 0.426484 | 3_1:+34226890 | Msa0356250:CDS |
| CCATATTCAATATCAGCATT+AGG | 0.437256 | 3_1:-34227013 | None:intergenic |
| TGAGAAATATCATTCTTAAG+TGG | 0.452118 | 3_1:-34227167 | None:intergenic |
| GTTCAGAACCAGTTGGACTT+AGG | 0.469054 | 3_1:-34226898 | None:intergenic |
| AGCAGGGCGCTGTCCGTCTG+AGG | 0.471670 | 3_1:+34226787 | Msa0356250:CDS |
| TGAAAATGACTACTTGAAGA+TGG | 0.478741 | 3_1:+34227132 | Msa0356250:CDS |
| AGATTGTCGTTGTGTCCCTT+GGG | 0.482624 | 3_1:+34226856 | Msa0356250:CDS |
| CAGACGAAGAACGTTGAAGC+AGG | 0.491505 | 3_1:+34226770 | Msa0356250:CDS |
| ATATTATGTTCAGAACCAGT+TGG | 0.519725 | 3_1:-34226905 | None:intergenic |
| GAGTGTATCAAGAAGGGAAG+TGG | 0.527393 | 3_1:+34226971 | Msa0356250:CDS |
| TCATACCGAGTGTATCAAGA+AGG | 0.550383 | 3_1:+34226964 | Msa0356250:CDS |
| CGTTCTGCTTCATTTACAGA+GGG | 0.566815 | 3_1:-34227046 | None:intergenic |
| GCAGGGCGCTGTCCGTCTGA+GGG | 0.577266 | 3_1:+34226788 | Msa0356250:CDS |
| CGGGTAAAATGGGGAACAAG+TGG | 0.587166 | 3_1:-34226813 | None:intergenic |
| AATTGATCAATTGGAAACAG+AGG | 0.607072 | 3_1:-34227247 | None:intergenic |
| ACTTCCCTTCTTGATACACT+CGG | 0.611342 | 3_1:-34226969 | None:intergenic |
| CAATCTATGATATGGCCGCA+TGG | 0.623261 | 3_1:-34226839 | None:intergenic |
| ATACCAAACAATGATGCCCA+AGG | 0.625538 | 3_1:-34226872 | None:intergenic |
| ACGTTCTGCTTCATTTACAG+AGG | 0.626101 | 3_1:-34227047 | None:intergenic |
| CATACCGAGTGTATCAAGAA+GGG | 0.627385 | 3_1:+34226965 | Msa0356250:CDS |
| AGTGTATCAAGAAGGGAAGT+GGG | 0.627385 | 3_1:+34226972 | Msa0356250:CDS |
| GAACAAGTGGAACCCTCAGA+CGG | 0.635489 | 3_1:-34226800 | None:intergenic |
| AGACGAAGAACGTTGAAGCA+GGG | 0.636380 | 3_1:+34226771 | Msa0356250:CDS |
| ATGCTGATATTGAATATGGA+TGG | 0.639133 | 3_1:+34227017 | Msa0356250:CDS |
| GCATGGATTCGGGTAAAATG+GGG | 0.643525 | 3_1:-34226822 | None:intergenic |
| TACCAAACAATGATGCCCAA+GGG | 0.669329 | 3_1:-34226871 | None:intergenic |
| ACATAATATGAAGATGATCG+AGG | 0.692790 | 3_1:+34226919 | Msa0356250:CDS |
| TAGATGCATGATAACATGCA+TGG | 0.728301 | 3_1:-34227206 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCGATATATATTTATATGTT+AGG | + | chr3_1:34226588-34226607 | Msa0356250:intron | 15.0% |
| !! | TCGATATATATTTATATGTT+AGG | + | chr3_1:34226588-34226607 | Msa0356250:intron | 15.0% |
| !! | AAAAATATACATACAGAATG+TGG | - | chr3_1:34226543-34226562 | None:intergenic | 20.0% |
| !! | TGAATATAACGTATATGTTT+AGG | - | chr3_1:34226699-34226718 | None:intergenic | 20.0% |
| !!! | TGAAGAAATTTTTTACTACA+GGG | - | chr3_1:34227093-34227112 | None:intergenic | 20.0% |
| !!! | TTGAAGAAATTTTTTACTAC+AGG | - | chr3_1:34227094-34227113 | None:intergenic | 20.0% |
| !! | AAAAATATACATACAGAATG+TGG | - | chr3_1:34226543-34226562 | None:intergenic | 20.0% |
| !! | TGAATATAACGTATATGTTT+AGG | - | chr3_1:34226699-34226718 | None:intergenic | 20.0% |
| !!! | TGAAGAAATTTTTTACTACA+GGG | - | chr3_1:34227093-34227112 | None:intergenic | 20.0% |
| !!! | TTGAAGAAATTTTTTACTAC+AGG | - | chr3_1:34227094-34227113 | None:intergenic | 20.0% |
| ! | TGAGAAATATCATTCTTAAG+TGG | - | chr3_1:34227170-34227189 | None:intergenic | 25.0% |
| ! | AAGAAATCCAATTGATCAAT+TGG | - | chr3_1:34227259-34227278 | None:intergenic | 25.0% |
| ! | ATTGATCAATTGGATTTCTT+CGG | + | chr3_1:34227259-34227278 | Msa0356250:three_prime_UTR | 25.0% |
| ! | TGAGAAATATCATTCTTAAG+TGG | - | chr3_1:34227170-34227189 | None:intergenic | 25.0% |
| ! | AAGAAATCCAATTGATCAAT+TGG | - | chr3_1:34227259-34227278 | None:intergenic | 25.0% |
| ! | ATTGATCAATTGGATTTCTT+CGG | + | chr3_1:34227259-34227278 | Msa0356250:three_prime_UTR | 25.0% |
| !! | TTATGTTAAGCTTGCTACTT+TGG | + | chr3_1:34226502-34226521 | Msa0356250:CDS | 30.0% |
| CGTATATGTTTAGGAAAGTT+TGG | - | chr3_1:34226690-34226709 | None:intergenic | 30.0% | |
| CGTTATATTCACACATGTAT+TGG | + | chr3_1:34226708-34226727 | Msa0356250:intron | 30.0% | |
| ATATTATGTTCAGAACCAGT+TGG | - | chr3_1:34226908-34226927 | None:intergenic | 30.0% | |
| ACATAATATGAAGATGATCG+AGG | + | chr3_1:34226919-34226938 | Msa0356250:CDS | 30.0% | |
| ! | GTATGAGTTTTGCATAAGTT+AGG | - | chr3_1:34226950-34226969 | None:intergenic | 30.0% |
| CCATATTCAATATCAGCATT+AGG | - | chr3_1:34227016-34227035 | None:intergenic | 30.0% | |
| CCTAATGCTGATATTGAATA+TGG | + | chr3_1:34227013-34227032 | Msa0356250:CDS | 30.0% | |
| ATGCTGATATTGAATATGGA+TGG | + | chr3_1:34227017-34227036 | Msa0356250:CDS | 30.0% | |
| !!! | GAAATTTTTTACTACAGGGT+TGG | - | chr3_1:34227089-34227108 | None:intergenic | 30.0% |
| !! | GTCATTTTCATTAGAGTTTG+AGG | - | chr3_1:34227122-34227141 | None:intergenic | 30.0% |
| TGAAAATGACTACTTGAAGA+TGG | + | chr3_1:34227132-34227151 | Msa0356250:CDS | 30.0% | |
| AATTGATCAATTGGAAACAG+AGG | - | chr3_1:34227250-34227269 | None:intergenic | 30.0% | |
| TCTGTTTCCAATTGATCAAT+TGG | + | chr3_1:34227249-34227268 | Msa0356250:three_prime_UTR | 30.0% | |
| !! | TTATGTTAAGCTTGCTACTT+TGG | + | chr3_1:34226502-34226521 | Msa0356250:CDS | 30.0% |
| CGTATATGTTTAGGAAAGTT+TGG | - | chr3_1:34226690-34226709 | None:intergenic | 30.0% | |
| CGTTATATTCACACATGTAT+TGG | + | chr3_1:34226708-34226727 | Msa0356250:intron | 30.0% | |
| ATATTATGTTCAGAACCAGT+TGG | - | chr3_1:34226908-34226927 | None:intergenic | 30.0% | |
| ACATAATATGAAGATGATCG+AGG | + | chr3_1:34226919-34226938 | Msa0356250:CDS | 30.0% | |
| ! | GTATGAGTTTTGCATAAGTT+AGG | - | chr3_1:34226950-34226969 | None:intergenic | 30.0% |
| CCATATTCAATATCAGCATT+AGG | - | chr3_1:34227016-34227035 | None:intergenic | 30.0% | |
| CCTAATGCTGATATTGAATA+TGG | + | chr3_1:34227013-34227032 | Msa0356250:CDS | 30.0% | |
| ATGCTGATATTGAATATGGA+TGG | + | chr3_1:34227017-34227036 | Msa0356250:CDS | 30.0% | |
| !!! | GAAATTTTTTACTACAGGGT+TGG | - | chr3_1:34227089-34227108 | None:intergenic | 30.0% |
| !! | GTCATTTTCATTAGAGTTTG+AGG | - | chr3_1:34227122-34227141 | None:intergenic | 30.0% |
| TGAAAATGACTACTTGAAGA+TGG | + | chr3_1:34227132-34227151 | Msa0356250:CDS | 30.0% | |
| AATTGATCAATTGGAAACAG+AGG | - | chr3_1:34227250-34227269 | None:intergenic | 30.0% | |
| TCTGTTTCCAATTGATCAAT+TGG | + | chr3_1:34227249-34227268 | Msa0356250:three_prime_UTR | 30.0% | |
| ATGGCAAAGGCAGTTAAAAT+TGG | - | chr3_1:34226736-34226755 | None:intergenic | 35.0% | |
| CACAACGACAATCTATGATA+TGG | - | chr3_1:34226850-34226869 | None:intergenic | 35.0% | |
| ! | TGACTACTTGAAGATGGATT+TGG | + | chr3_1:34227138-34227157 | Msa0356250:CDS | 35.0% |
| TAGATGCATGATAACATGCA+TGG | - | chr3_1:34227209-34227228 | None:intergenic | 35.0% | |
| ATGGCAAAGGCAGTTAAAAT+TGG | - | chr3_1:34226736-34226755 | None:intergenic | 35.0% | |
| CACAACGACAATCTATGATA+TGG | - | chr3_1:34226850-34226869 | None:intergenic | 35.0% | |
| ! | TGACTACTTGAAGATGGATT+TGG | + | chr3_1:34227138-34227157 | Msa0356250:CDS | 35.0% |
| TAGATGCATGATAACATGCA+TGG | - | chr3_1:34227209-34227228 | None:intergenic | 35.0% | |
| ACGATTACTGCAAATGGCAA+AGG | - | chr3_1:34226749-34226768 | None:intergenic | 40.0% | |
| TACCAAACAATGATGCCCAA+GGG | - | chr3_1:34226874-34226893 | None:intergenic | 40.0% | |
| ATACCAAACAATGATGCCCA+AGG | - | chr3_1:34226875-34226894 | None:intergenic | 40.0% | |
| TCATACCGAGTGTATCAAGA+AGG | + | chr3_1:34226964-34226983 | Msa0356250:CDS | 40.0% | |
| CATACCGAGTGTATCAAGAA+GGG | + | chr3_1:34226965-34226984 | Msa0356250:CDS | 40.0% | |
| ACTTCCCTTCTTGATACACT+CGG | - | chr3_1:34226972-34226991 | None:intergenic | 40.0% | |
| AGTGTATCAAGAAGGGAAGT+GGG | + | chr3_1:34226972-34226991 | Msa0356250:CDS | 40.0% | |
| CGTTCTGCTTCATTTACAGA+GGG | - | chr3_1:34227049-34227068 | None:intergenic | 40.0% | |
| ACGTTCTGCTTCATTTACAG+AGG | - | chr3_1:34227050-34227069 | None:intergenic | 40.0% | |
| GCAGAACGTTACTTCAAGAT+TGG | + | chr3_1:34227061-34227080 | Msa0356250:CDS | 40.0% | |
| ACGATTACTGCAAATGGCAA+AGG | - | chr3_1:34226749-34226768 | None:intergenic | 40.0% | |
| TACCAAACAATGATGCCCAA+GGG | - | chr3_1:34226874-34226893 | None:intergenic | 40.0% | |
| ATACCAAACAATGATGCCCA+AGG | - | chr3_1:34226875-34226894 | None:intergenic | 40.0% | |
| TCATACCGAGTGTATCAAGA+AGG | + | chr3_1:34226964-34226983 | Msa0356250:CDS | 40.0% | |
| CATACCGAGTGTATCAAGAA+GGG | + | chr3_1:34226965-34226984 | Msa0356250:CDS | 40.0% | |
| ACTTCCCTTCTTGATACACT+CGG | - | chr3_1:34226972-34226991 | None:intergenic | 40.0% | |
| AGTGTATCAAGAAGGGAAGT+GGG | + | chr3_1:34226972-34226991 | Msa0356250:CDS | 40.0% | |
| CGTTCTGCTTCATTTACAGA+GGG | - | chr3_1:34227049-34227068 | None:intergenic | 40.0% | |
| ACGTTCTGCTTCATTTACAG+AGG | - | chr3_1:34227050-34227069 | None:intergenic | 40.0% | |
| GCAGAACGTTACTTCAAGAT+TGG | + | chr3_1:34227061-34227080 | Msa0356250:CDS | 40.0% | |
| GTCTGGACGATTACTGCAAA+TGG | - | chr3_1:34226755-34226774 | None:intergenic | 45.0% | |
| AGACGAAGAACGTTGAAGCA+GGG | + | chr3_1:34226771-34226790 | Msa0356250:CDS | 45.0% | |
| GCATGGATTCGGGTAAAATG+GGG | - | chr3_1:34226825-34226844 | None:intergenic | 45.0% | |
| CGCATGGATTCGGGTAAAAT+GGG | - | chr3_1:34226826-34226845 | None:intergenic | 45.0% | |
| ! | CCATTTTACCCGAATCCATG+CGG | + | chr3_1:34226824-34226843 | Msa0356250:CDS | 45.0% |
| ATGATATGGCCGCATGGATT+CGG | - | chr3_1:34226836-34226855 | None:intergenic | 45.0% | |
| CAATCTATGATATGGCCGCA+TGG | - | chr3_1:34226842-34226861 | None:intergenic | 45.0% | |
| TAGATTGTCGTTGTGTCCCT+TGG | + | chr3_1:34226855-34226874 | Msa0356250:CDS | 45.0% | |
| AGATTGTCGTTGTGTCCCTT+GGG | + | chr3_1:34226856-34226875 | Msa0356250:CDS | 45.0% | |
| GGTATTTGCCTAAGTCCAAC+TGG | + | chr3_1:34226890-34226909 | Msa0356250:CDS | 45.0% | |
| GTTCAGAACCAGTTGGACTT+AGG | - | chr3_1:34226901-34226920 | None:intergenic | 45.0% | |
| GAGTGTATCAAGAAGGGAAG+TGG | + | chr3_1:34226971-34226990 | Msa0356250:CDS | 45.0% | |
| GTCTGGACGATTACTGCAAA+TGG | - | chr3_1:34226755-34226774 | None:intergenic | 45.0% | |
| AGACGAAGAACGTTGAAGCA+GGG | + | chr3_1:34226771-34226790 | Msa0356250:CDS | 45.0% | |
| GCATGGATTCGGGTAAAATG+GGG | - | chr3_1:34226825-34226844 | None:intergenic | 45.0% | |
| CGCATGGATTCGGGTAAAAT+GGG | - | chr3_1:34226826-34226845 | None:intergenic | 45.0% | |
| ! | CCATTTTACCCGAATCCATG+CGG | + | chr3_1:34226824-34226843 | Msa0356250:CDS | 45.0% |
| ATGATATGGCCGCATGGATT+CGG | - | chr3_1:34226836-34226855 | None:intergenic | 45.0% | |
| CAATCTATGATATGGCCGCA+TGG | - | chr3_1:34226842-34226861 | None:intergenic | 45.0% | |
| TAGATTGTCGTTGTGTCCCT+TGG | + | chr3_1:34226855-34226874 | Msa0356250:CDS | 45.0% | |
| AGATTGTCGTTGTGTCCCTT+GGG | + | chr3_1:34226856-34226875 | Msa0356250:CDS | 45.0% | |
| GGTATTTGCCTAAGTCCAAC+TGG | + | chr3_1:34226890-34226909 | Msa0356250:CDS | 45.0% | |
| GTTCAGAACCAGTTGGACTT+AGG | - | chr3_1:34226901-34226920 | None:intergenic | 45.0% | |
| GAGTGTATCAAGAAGGGAAG+TGG | + | chr3_1:34226971-34226990 | Msa0356250:CDS | 45.0% | |
| CTGCTTCAACGTTCTTCGTC+TGG | - | chr3_1:34226772-34226791 | None:intergenic | 50.0% | |
| CAGACGAAGAACGTTGAAGC+AGG | + | chr3_1:34226770-34226789 | Msa0356250:CDS | 50.0% | |
| GAACAAGTGGAACCCTCAGA+CGG | - | chr3_1:34226803-34226822 | None:intergenic | 50.0% | |
| CGGGTAAAATGGGGAACAAG+TGG | - | chr3_1:34226816-34226835 | None:intergenic | 50.0% | |
| CCGCATGGATTCGGGTAAAA+TGG | - | chr3_1:34226827-34226846 | None:intergenic | 50.0% | |
| TGATATGGCCGCATGGATTC+GGG | - | chr3_1:34226835-34226854 | None:intergenic | 50.0% | |
| GTCCCTTGGGCATCATTGTT+TGG | + | chr3_1:34226869-34226888 | Msa0356250:CDS | 50.0% | |
| CTGCTTCAACGTTCTTCGTC+TGG | - | chr3_1:34226772-34226791 | None:intergenic | 50.0% | |
| CAGACGAAGAACGTTGAAGC+AGG | + | chr3_1:34226770-34226789 | Msa0356250:CDS | 50.0% | |
| GAACAAGTGGAACCCTCAGA+CGG | - | chr3_1:34226803-34226822 | None:intergenic | 50.0% | |
| CGGGTAAAATGGGGAACAAG+TGG | - | chr3_1:34226816-34226835 | None:intergenic | 50.0% | |
| CCGCATGGATTCGGGTAAAA+TGG | - | chr3_1:34226827-34226846 | None:intergenic | 50.0% | |
| TGATATGGCCGCATGGATTC+GGG | - | chr3_1:34226835-34226854 | None:intergenic | 50.0% | |
| GTCCCTTGGGCATCATTGTT+TGG | + | chr3_1:34226869-34226888 | Msa0356250:CDS | 50.0% | |
| !! | AGCAGGGCGCTGTCCGTCTG+AGG | + | chr3_1:34226787-34226806 | Msa0356250:CDS | 70.0% |
| !! | GCAGGGCGCTGTCCGTCTGA+GGG | + | chr3_1:34226788-34226807 | Msa0356250:CDS | 70.0% |
| !! | AGCAGGGCGCTGTCCGTCTG+AGG | + | chr3_1:34226787-34226806 | Msa0356250:CDS | 70.0% |
| !! | GCAGGGCGCTGTCCGTCTGA+GGG | + | chr3_1:34226788-34226807 | Msa0356250:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 34226454 | 34227291 | 34226454 | ID=Msa0356250;Name=Msa0356250 |
| chr3_1 | mRNA | 34226454 | 34227291 | 34226454 | ID=Msa0356250-mRNA-1;Parent=Msa0356250;Name=Msa0356250-mRNA-1;_AED=0.28;_eAED=0.28;_QI=43|1|1|1|1|1|2|117|154 |
| chr3_1 | exon | 34226454 | 34226548 | 34226454 | ID=Msa0356250-mRNA-1:exon:6503;Parent=Msa0356250-mRNA-1 |
| chr3_1 | exon | 34226762 | 34227291 | 34226762 | ID=Msa0356250-mRNA-1:exon:6504;Parent=Msa0356250-mRNA-1 |
| chr3_1 | five_prime_UTR | 34226454 | 34226496 | 34226454 | ID=Msa0356250-mRNA-1:five_prime_utr;Parent=Msa0356250-mRNA-1 |
| chr3_1 | CDS | 34226497 | 34226548 | 34226497 | ID=Msa0356250-mRNA-1:cds;Parent=Msa0356250-mRNA-1 |
| chr3_1 | CDS | 34226762 | 34227174 | 34226762 | ID=Msa0356250-mRNA-1:cds;Parent=Msa0356250-mRNA-1 |
| chr3_1 | three_prime_UTR | 34227175 | 34227291 | 34227175 | ID=Msa0356250-mRNA-1:three_prime_utr;Parent=Msa0356250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
