Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190090 | XP_024638523.1 | 89.270 | 233 | 5 | 1 | 1 | 233 | 146 | 358 | 2.24e-141 | 410 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190090 | sp|Q8VYJ2|AHL1_ARATH | 71.000 | 200 | 50 | 6 | 35 | 230 | 160 | 355 | 6.73e-88 | 266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028280 | Msa1190090 | -0.801809 | 7.557539e-49 | -8.615850e-47 |
| Msa0031650 | Msa1190090 | 0.814929 | 1.199627e-51 | -8.615850e-47 |
| Msa0046700 | Msa1190090 | -0.808447 | 3.083900e-50 | -8.615850e-47 |
| Msa0057740 | Msa1190090 | -0.808291 | 3.329722e-50 | -8.615850e-47 |
| Msa0065190 | Msa1190090 | -0.809565 | 1.776582e-50 | -8.615850e-47 |
| Msa0080620 | Msa1190090 | -0.826490 | 2.636955e-54 | -8.615850e-47 |
| Msa0085710 | Msa1190090 | 0.805179 | 1.512714e-49 | -8.615850e-47 |
| Msa0604280 | Msa1190090 | 0.808981 | 2.370793e-50 | -8.615850e-47 |
| Msa0604640 | Msa1190090 | -0.809715 | 1.649950e-50 | -8.615850e-47 |
| Msa0605480 | Msa1190090 | 0.824399 | 8.242364e-54 | -8.615850e-47 |
| Msa0624260 | Msa1190090 | -0.803823 | 2.899702e-49 | -8.615850e-47 |
| Msa0624360 | Msa1190090 | -0.800903 | 1.158563e-48 | -8.615850e-47 |
| Msa0638040 | Msa1190090 | -0.807747 | 4.345314e-50 | -8.615850e-47 |
| Msa0646440 | Msa1190090 | 0.828898 | 6.959190e-55 | -8.615850e-47 |
| Msa0675230 | Msa1190090 | -0.800235 | 1.585086e-48 | -8.615850e-47 |
| Msa0677110 | Msa1190090 | -0.827455 | 1.549579e-54 | -8.615850e-47 |
| Msa0716600 | Msa1190090 | 0.807785 | 4.264926e-50 | -8.615850e-47 |
| Msa0744280 | Msa1190090 | -0.812711 | 3.694674e-51 | -8.615850e-47 |
| Msa0754840 | Msa1190090 | -0.807190 | 5.705569e-50 | -8.615850e-47 |
| Msa0758150 | Msa1190090 | 0.802268 | 6.081694e-49 | -8.615850e-47 |
| Msa0763350 | Msa1190090 | -0.821389 | 4.143683e-53 | -8.615850e-47 |
| Msa0793060 | Msa1190090 | -0.835095 | 2.048437e-56 | -8.615850e-47 |
| Msa0817100 | Msa1190090 | 0.808472 | 3.045110e-50 | -8.615850e-47 |
| Msa0833910 | Msa1190090 | -0.801450 | 8.954042e-49 | -8.615850e-47 |
| Msa0834160 | Msa1190090 | -0.804702 | 1.903333e-49 | -8.615850e-47 |
| Msa0840890 | Msa1190090 | -0.804970 | 1.672763e-49 | -8.615850e-47 |
| Msa0160580 | Msa1190090 | 0.802597 | 5.202274e-49 | -8.615850e-47 |
| Msa0171740 | Msa1190090 | 0.818419 | 1.979161e-52 | -8.615850e-47 |
| Msa0186510 | Msa1190090 | -0.817058 | 4.015806e-52 | -8.615850e-47 |
| Msa0188560 | Msa1190090 | 0.801177 | 1.018228e-48 | -8.615850e-47 |
| Msa0227290 | Msa1190090 | -0.800832 | 1.197932e-48 | -8.615850e-47 |
| Msa0378000 | Msa1190090 | -0.812374 | 4.378958e-51 | -8.615850e-47 |
| Msa0379500 | Msa1190090 | -0.812978 | 3.228785e-51 | -8.615850e-47 |
| Msa0404180 | Msa1190090 | -0.831849 | 1.321935e-55 | -8.615850e-47 |
| Msa0409490 | Msa1190090 | 0.821320 | 4.298061e-53 | -8.615850e-47 |
| Msa0414480 | Msa1190090 | 0.807228 | 5.600779e-50 | -8.615850e-47 |
| Msa0426890 | Msa1190090 | -0.807602 | 4.665728e-50 | -8.615850e-47 |
| Msa0449360 | Msa1190090 | 0.827988 | 1.154320e-54 | -8.615850e-47 |
| Msa0456480 | Msa1190090 | -0.828681 | 7.854221e-55 | -8.615850e-47 |
| Msa0473320 | Msa1190090 | -0.805425 | 1.343129e-49 | -8.615850e-47 |
| Msa0475360 | Msa1190090 | -0.831144 | 1.971163e-55 | -8.615850e-47 |
| Msa0996980 | Msa1190090 | 0.819658 | 1.034598e-52 | -8.615850e-47 |
| Msa0996990 | Msa1190090 | 0.804269 | 2.342592e-49 | -8.615850e-47 |
| Msa1010470 | Msa1190090 | -0.802133 | 6.483474e-49 | -8.615850e-47 |
| Msa1036020 | Msa1190090 | 0.838917 | 2.162981e-57 | -8.615850e-47 |
| Msa1057340 | Msa1190090 | -0.809316 | 2.010011e-50 | -8.615850e-47 |
| Msa1061670 | Msa1190090 | 0.818835 | 1.593073e-52 | -8.615850e-47 |
| Msa1064940 | Msa1190090 | 0.807413 | 5.115970e-50 | -8.615850e-47 |
| Msa1069440 | Msa1190090 | -0.842278 | 2.850687e-58 | -8.615850e-47 |
| Msa1072430 | Msa1190090 | -0.812391 | 4.340297e-51 | -8.615850e-47 |
| Msa1076280 | Msa1190090 | 0.814850 | 1.248735e-51 | -8.615850e-47 |
| Msa1103450 | Msa1190090 | 0.816615 | 5.046825e-52 | -8.615850e-47 |
| Msa1106960 | Msa1190090 | 0.807357 | 5.258697e-50 | -8.615850e-47 |
| Msa0244310 | Msa1190090 | 0.804512 | 2.084837e-49 | -8.615850e-47 |
| Msa0245660 | Msa1190090 | 0.837128 | 6.241433e-57 | -8.615850e-47 |
| Msa0267710 | Msa1190090 | 0.808791 | 2.604124e-50 | -8.615850e-47 |
| Msa0301460 | Msa1190090 | -0.819500 | 1.123985e-52 | -8.615850e-47 |
| Msa0322460 | Msa1190090 | 0.827794 | 1.285231e-54 | -8.615850e-47 |
| Msa0329060 | Msa1190090 | -0.814567 | 1.442516e-51 | -8.615850e-47 |
| Msa0335340 | Msa1190090 | 0.800668 | 1.293533e-48 | -8.615850e-47 |
| Msa0338900 | Msa1190090 | -0.800977 | 1.118559e-48 | -8.615850e-47 |
| Msa0356200 | Msa1190090 | 0.873236 | 1.718865e-67 | -8.615850e-47 |
| Msa0356240 | Msa1190090 | 0.843750 | 1.156134e-58 | -8.615850e-47 |
| Msa0356250 | Msa1190090 | 0.847980 | 8.203465e-60 | -8.615850e-47 |
| Msa0356270 | Msa1190090 | 0.811563 | 6.576194e-51 | -8.615850e-47 |
| Msa0356320 | Msa1190090 | 0.815593 | 8.537089e-52 | -8.615850e-47 |
| Msa0356380 | Msa1190090 | 0.864848 | 9.047079e-65 | -8.615850e-47 |
| Msa0356410 | Msa1190090 | 0.866701 | 2.352503e-65 | -8.615850e-47 |
| Msa0364010 | Msa1190090 | -0.816723 | 4.773625e-52 | -8.615850e-47 |
| Msa1107320 | Msa1190090 | 0.805691 | 1.181503e-49 | -8.615850e-47 |
| Msa1121580 | Msa1190090 | -0.800343 | 1.506539e-48 | -8.615850e-47 |
| Msa1122550 | Msa1190090 | 0.826066 | 3.325349e-54 | -8.615850e-47 |
| Msa1124440 | Msa1190090 | -0.802193 | 6.301042e-49 | -8.615850e-47 |
| Msa1128850 | Msa1190090 | -0.806191 | 9.271785e-50 | -8.615850e-47 |
| Msa1138600 | Msa1190090 | -0.837239 | 5.846159e-57 | -8.615850e-47 |
| Msa1150860 | Msa1190090 | 0.807587 | 4.700327e-50 | -8.615850e-47 |
| Msa1163340 | Msa1190090 | 0.815041 | 1.132564e-51 | -8.615850e-47 |
| Msa1173410 | Msa1190090 | -0.806921 | 6.502546e-50 | -8.615850e-47 |
| Msa1182960 | Msa1190090 | -0.801779 | 7.665831e-49 | -8.615850e-47 |
| Msa1187810 | Msa1190090 | -0.818188 | 2.233153e-52 | -8.615850e-47 |
| Msa1190090 | Msa1190140 | 0.817380 | 3.398254e-52 | -8.615850e-47 |
| Msa1190090 | Msa1190300 | -0.801137 | 1.037747e-48 | -8.615850e-47 |
| Msa1190090 | Msa1211160 | 0.813337 | 2.693896e-51 | -8.615850e-47 |
| Msa1190090 | Msa1211320 | 0.825195 | 5.351776e-54 | -8.615850e-47 |
| Msa1190090 | Msa1216370 | 0.803168 | 3.964857e-49 | -8.615850e-47 |
| Msa1190090 | Msa1233620 | 0.814367 | 1.597203e-51 | -8.615850e-47 |
| Msa1190090 | Msa1246420 | -0.809615 | 1.733330e-50 | -8.615850e-47 |
| Msa1190090 | Msa1258020 | 0.932067 | 1.482871e-94 | -8.615850e-47 |
| Msa1190090 | Msa1258100 | -0.811219 | 7.811689e-51 | -8.615850e-47 |
| Msa1190090 | Msa1275840 | 0.831292 | 1.813123e-55 | -8.615850e-47 |
| Msa1190090 | Msa1283120 | -0.819196 | 1.318806e-52 | -8.615850e-47 |
| Msa1190090 | Msa1286660 | -0.815729 | 7.963118e-52 | -8.615850e-47 |
| Msa1190090 | Msa1292700 | -0.800638 | 1.311848e-48 | -8.615850e-47 |
| Msa1190090 | Msa1299310 | 0.804525 | 2.071396e-49 | -8.615850e-47 |
| Msa1190090 | Msa1309910 | -0.809852 | 1.542014e-50 | -8.615850e-47 |
| Msa1190090 | Msa1314020 | 0.831726 | 1.417426e-55 | -8.615850e-47 |
| Msa1190090 | Msa1329770 | 0.800461 | 1.425484e-48 | -8.615850e-47 |
| Msa1190090 | Msa1335500 | 0.809547 | 1.792517e-50 | -8.615850e-47 |
| Msa1190090 | Msa1339490 | 0.804913 | 1.719303e-49 | -8.615850e-47 |
| Msa1190090 | Msa1357840 | 0.800611 | 1.329060e-48 | -8.615850e-47 |
| Msa1190090 | Msa1377190 | 0.814049 | 1.877636e-51 | -8.615850e-47 |
| Msa1190090 | Msa1378950 | 0.808570 | 2.901921e-50 | -8.615850e-47 |
| Msa1190090 | Msa1401650 | 0.919362 | 4.949879e-87 | -8.615850e-47 |
| Msa1190090 | Msa1409600 | 0.805961 | 1.036692e-49 | -8.615850e-47 |
| Msa1190090 | Msa1451690 | -0.806678 | 7.318979e-50 | -8.615850e-47 |
| Msa1190090 | Msa1452200 | -0.811395 | 7.152852e-51 | -8.615850e-47 |
| Msa1190090 | Msa1456600 | 0.800323 | 1.520793e-48 | -8.615850e-47 |
| Msa0491800 | Msa1190090 | 0.805197 | 1.499420e-49 | -8.615850e-47 |
| Msa0513660 | Msa1190090 | -0.801216 | 9.996773e-49 | -8.615850e-47 |
| Msa0547810 | Msa1190090 | -0.809420 | 1.908925e-50 | -8.615850e-47 |
| Msa0549330 | Msa1190090 | -0.807759 | 4.319949e-50 | -8.615850e-47 |
| Msa0549970 | Msa1190090 | 0.827948 | 1.179968e-54 | -8.615850e-47 |
| Msa0550770 | Msa1190090 | -0.806964 | 6.368347e-50 | -8.615850e-47 |
| Msa0550800 | Msa1190090 | -0.813775 | 2.157350e-51 | -8.615850e-47 |
| Msa0554660 | Msa1190090 | 0.808179 | 3.516821e-50 | -8.615850e-47 |
| Msa0589740 | Msa1190090 | 0.808935 | 2.425731e-50 | -8.615850e-47 |
| Msa0848780 | Msa1190090 | -0.809343 | 1.983060e-50 | -8.615850e-47 |
| Msa0896920 | Msa1190090 | 0.858730 | 6.740435e-63 | -8.615850e-47 |
| Msa0902340 | Msa1190090 | 0.802261 | 6.100509e-49 | -8.615850e-47 |
| Msa0932930 | Msa1190090 | 0.805250 | 1.461564e-49 | -8.615850e-47 |
| Msa0962320 | Msa1190090 | 0.834148 | 3.542989e-56 | -8.615850e-47 |
| Msa0970790 | Msa1190090 | 0.807079 | 6.023302e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190090 | MtrunA17_Chr4g0056761 | 97.059 | 204 | 6 | 0 | 30 | 233 | 129 | 332 | 1.25e-142 | 402 |
| Msa1190090 | MtrunA17_Chr7g0245841 | 62.264 | 212 | 59 | 4 | 40 | 231 | 122 | 332 | 9.26e-67 | 209 |
| Msa1190090 | MtrunA17_Chr8g0351761 | 52.381 | 231 | 81 | 2 | 29 | 231 | 126 | 355 | 6.97e-62 | 197 |
| Msa1190090 | MtrunA17_Chr1g0188211 | 67.105 | 152 | 47 | 3 | 33 | 183 | 122 | 271 | 1.21e-53 | 176 |
| Msa1190090 | MtrunA17_Chr1g0179461 | 54.037 | 161 | 71 | 3 | 26 | 185 | 126 | 284 | 4.99e-51 | 169 |
| Msa1190090 | MtrunA17_Chr5g0398621 | 60.000 | 150 | 54 | 3 | 40 | 185 | 92 | 239 | 9.84e-50 | 162 |
| Msa1190090 | MtrunA17_Chr6g0476061 | 61.765 | 136 | 48 | 2 | 42 | 177 | 127 | 258 | 4.53e-47 | 158 |
| Msa1190090 | MtrunA17_Chr5g0397551 | 52.000 | 150 | 67 | 3 | 30 | 179 | 119 | 263 | 1.68e-42 | 146 |
| Msa1190090 | MtrunA17_Chr8g0349091 | 53.793 | 145 | 66 | 1 | 30 | 174 | 140 | 283 | 2.11e-40 | 141 |
| Msa1190090 | MtrunA17_Chr8g0386741 | 51.724 | 145 | 68 | 2 | 30 | 174 | 151 | 293 | 3.22e-40 | 141 |
| Msa1190090 | MtrunA17_Chr7g0247431 | 48.077 | 156 | 79 | 2 | 30 | 184 | 142 | 296 | 2.01e-38 | 136 |
| Msa1190090 | MtrunA17_Chr4g0054661 | 60.331 | 121 | 46 | 2 | 42 | 162 | 139 | 257 | 7.39e-38 | 134 |
| Msa1190090 | MtrunA17_Chr4g0027331 | 54.622 | 119 | 50 | 3 | 40 | 155 | 14 | 131 | 2.91e-34 | 119 |
| Msa1190090 | MtrunA17_Chr4g0027371 | 48.299 | 147 | 70 | 4 | 29 | 170 | 3 | 148 | 1.11e-33 | 121 |
| Msa1190090 | MtrunA17_Chr4g0027351 | 54.310 | 116 | 49 | 2 | 44 | 158 | 18 | 130 | 1.46e-32 | 115 |
| Msa1190090 | MtrunA17_Chr1g0190011 | 52.542 | 118 | 51 | 2 | 45 | 161 | 109 | 222 | 6.99e-32 | 119 |
| Msa1190090 | MtrunA17_Chr7g0274821 | 51.163 | 129 | 59 | 1 | 40 | 168 | 138 | 262 | 1.86e-30 | 115 |
| Msa1190090 | MtrunA17_Chr4g0027301 | 43.939 | 132 | 72 | 2 | 29 | 158 | 10 | 141 | 3.90e-27 | 101 |
| Msa1190090 | MtrunA17_Chr5g0417581 | 40.426 | 141 | 67 | 3 | 36 | 161 | 10 | 148 | 1.78e-24 | 96.3 |
| Msa1190090 | MtrunA17_Chr6g0476241 | 48.092 | 131 | 62 | 3 | 40 | 170 | 172 | 296 | 1.79e-24 | 98.6 |
| Msa1190090 | MtrunA17_Chr5g0398591 | 43.548 | 124 | 60 | 2 | 97 | 219 | 11 | 125 | 2.87e-23 | 90.9 |
| Msa1190090 | MtrunA17_Chr1g0165101 | 42.647 | 136 | 58 | 4 | 42 | 161 | 147 | 278 | 1.81e-20 | 88.6 |
| Msa1190090 | MtrunA17_Chr3g0112131 | 43.548 | 124 | 65 | 2 | 48 | 171 | 109 | 227 | 2.93e-20 | 87.4 |
| Msa1190090 | MtrunA17_Chr3g0133051 | 38.400 | 125 | 75 | 2 | 45 | 168 | 101 | 224 | 8.21e-20 | 85.9 |
| Msa1190090 | MtrunA17_Chr5g0427311 | 39.200 | 125 | 71 | 3 | 46 | 168 | 81 | 202 | 7.92e-19 | 82.0 |
| Msa1190090 | MtrunA17_Chr1g0168121 | 41.129 | 124 | 68 | 2 | 48 | 171 | 72 | 190 | 6.25e-17 | 77.8 |
| Msa1190090 | MtrunA17_Chr4g0054651 | 43.860 | 114 | 60 | 1 | 48 | 161 | 106 | 215 | 1.13e-16 | 77.4 |
| Msa1190090 | MtrunA17_Chr5g0443311 | 37.162 | 148 | 72 | 2 | 48 | 178 | 81 | 224 | 1.63e-16 | 76.3 |
| Msa1190090 | MtrunA17_Chr7g0250031 | 45.614 | 114 | 58 | 1 | 48 | 161 | 87 | 196 | 2.49e-16 | 75.9 |
| Msa1190090 | MtrunA17_Chr5g0398531 | 42.105 | 114 | 62 | 1 | 48 | 161 | 130 | 239 | 1.24e-14 | 72.0 |
| Msa1190090 | MtrunA17_Chr3g0086021 | 40.741 | 108 | 57 | 3 | 57 | 161 | 118 | 221 | 1.52e-14 | 71.2 |
| Msa1190090 | MtrunA17_Chr8g0351651 | 43.860 | 114 | 60 | 1 | 48 | 161 | 116 | 225 | 2.87e-14 | 70.5 |
| Msa1190090 | MtrunA17_Chr1g0190051 | 40.351 | 114 | 64 | 1 | 48 | 161 | 104 | 213 | 1.38e-13 | 68.6 |
| Msa1190090 | MtrunA17_Chr5g0398601 | 57.143 | 70 | 30 | 0 | 123 | 192 | 5 | 74 | 2.00e-13 | 68.9 |
| Msa1190090 | MtrunA17_Chr5g0435681 | 39.024 | 123 | 70 | 2 | 49 | 171 | 120 | 237 | 1.71e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190090 | AT4G12080.1 | 71.000 | 200 | 50 | 6 | 35 | 230 | 160 | 355 | 6.84e-89 | 266 |
| Msa1190090 | AT4G22770.2 | 55.411 | 231 | 87 | 4 | 1 | 230 | 118 | 333 | 9.88e-66 | 207 |
| Msa1190090 | AT4G22770.1 | 55.411 | 231 | 87 | 4 | 1 | 230 | 118 | 333 | 9.88e-66 | 207 |
| Msa1190090 | AT4G25320.1 | 72.868 | 129 | 34 | 1 | 41 | 169 | 162 | 289 | 2.82e-60 | 195 |
| Msa1190090 | AT5G51590.1 | 75.000 | 124 | 30 | 1 | 41 | 164 | 174 | 296 | 5.67e-57 | 187 |
| Msa1190090 | AT5G62260.1 | 66.667 | 138 | 41 | 2 | 39 | 172 | 154 | 290 | 4.52e-56 | 184 |
| Msa1190090 | AT5G62260.3 | 66.667 | 138 | 41 | 2 | 39 | 172 | 154 | 290 | 4.52e-56 | 184 |
| Msa1190090 | AT4G00200.2 | 76.866 | 134 | 29 | 2 | 43 | 175 | 121 | 253 | 1.22e-55 | 180 |
| Msa1190090 | AT4G00200.1 | 76.866 | 134 | 29 | 2 | 43 | 175 | 121 | 253 | 1.22e-55 | 180 |
| Msa1190090 | AT5G62260.2 | 66.935 | 124 | 40 | 1 | 39 | 162 | 154 | 276 | 3.92e-52 | 171 |
| Msa1190090 | AT2G33620.1 | 56.364 | 165 | 64 | 3 | 40 | 204 | 158 | 314 | 9.21e-50 | 166 |
| Msa1190090 | AT2G33620.4 | 56.364 | 165 | 64 | 3 | 40 | 204 | 158 | 314 | 9.21e-50 | 166 |
| Msa1190090 | AT2G33620.2 | 56.364 | 165 | 64 | 3 | 40 | 204 | 158 | 314 | 9.21e-50 | 166 |
| Msa1190090 | AT2G33620.3 | 56.364 | 165 | 64 | 3 | 40 | 204 | 158 | 314 | 9.21e-50 | 166 |
| Msa1190090 | AT2G45850.1 | 57.895 | 133 | 55 | 1 | 30 | 162 | 147 | 278 | 8.84e-46 | 155 |
| Msa1190090 | AT2G45850.2 | 57.895 | 133 | 55 | 1 | 30 | 162 | 147 | 278 | 8.84e-46 | 155 |
| Msa1190090 | AT1G63470.1 | 56.296 | 135 | 57 | 2 | 30 | 164 | 162 | 294 | 1.00e-43 | 151 |
| Msa1190090 | AT1G63480.5 | 52.740 | 146 | 67 | 2 | 30 | 175 | 139 | 282 | 1.17e-42 | 148 |
| Msa1190090 | AT1G63480.7 | 52.740 | 146 | 67 | 2 | 30 | 175 | 139 | 282 | 1.17e-42 | 148 |
| Msa1190090 | AT1G63480.4 | 52.740 | 146 | 67 | 2 | 30 | 175 | 139 | 282 | 1.17e-42 | 148 |
| Msa1190090 | AT1G63480.3 | 52.740 | 146 | 67 | 2 | 30 | 175 | 139 | 282 | 1.17e-42 | 148 |
| Msa1190090 | AT1G63480.6 | 52.740 | 146 | 67 | 2 | 30 | 175 | 139 | 282 | 1.17e-42 | 148 |
| Msa1190090 | AT1G63480.2 | 52.740 | 146 | 67 | 2 | 30 | 175 | 145 | 288 | 1.23e-42 | 148 |
| Msa1190090 | AT1G63480.1 | 52.740 | 146 | 67 | 2 | 30 | 175 | 145 | 288 | 1.23e-42 | 148 |
| Msa1190090 | AT2G45850.3 | 57.480 | 127 | 53 | 1 | 30 | 156 | 147 | 272 | 1.88e-42 | 145 |
| Msa1190090 | AT3G61310.1 | 56.391 | 133 | 57 | 1 | 30 | 162 | 149 | 280 | 1.12e-39 | 140 |
| Msa1190090 | AT4G17950.1 | 49.660 | 147 | 71 | 2 | 42 | 186 | 218 | 363 | 2.72e-39 | 140 |
| Msa1190090 | AT3G04590.1 | 50.000 | 122 | 57 | 1 | 41 | 162 | 167 | 284 | 8.46e-36 | 129 |
| Msa1190090 | AT3G04590.2 | 50.000 | 122 | 57 | 1 | 41 | 162 | 167 | 284 | 1.07e-34 | 128 |
| Msa1190090 | AT5G46640.1 | 55.725 | 131 | 54 | 2 | 42 | 172 | 177 | 303 | 1.50e-32 | 122 |
| Msa1190090 | AT2G36560.1 | 42.975 | 121 | 68 | 1 | 42 | 161 | 102 | 222 | 9.97e-26 | 105 |
| Msa1190090 | AT3G60870.1 | 41.026 | 117 | 63 | 2 | 45 | 161 | 86 | 196 | 8.32e-19 | 83.2 |
| Msa1190090 | AT5G49700.1 | 36.765 | 136 | 82 | 3 | 45 | 176 | 83 | 218 | 2.51e-18 | 82.0 |
| Msa1190090 | AT1G14490.1 | 38.235 | 136 | 76 | 3 | 46 | 173 | 31 | 166 | 8.71e-17 | 76.3 |
| Msa1190090 | AT1G14490.2 | 38.235 | 136 | 76 | 3 | 46 | 173 | 50 | 185 | 1.13e-16 | 76.6 |
| Msa1190090 | AT2G42940.1 | 44.248 | 113 | 59 | 1 | 50 | 162 | 85 | 193 | 1.23e-16 | 77.0 |
| Msa1190090 | AT4G17800.1 | 42.982 | 114 | 61 | 1 | 48 | 161 | 112 | 221 | 2.64e-15 | 73.9 |
| Msa1190090 | AT5G28590.1 | 41.322 | 121 | 46 | 3 | 41 | 161 | 26 | 121 | 4.95e-15 | 72.0 |
| Msa1190090 | AT4G14465.1 | 39.231 | 130 | 74 | 2 | 48 | 177 | 97 | 221 | 7.02e-15 | 72.4 |
| Msa1190090 | AT2G35270.1 | 42.105 | 114 | 62 | 1 | 48 | 161 | 108 | 217 | 8.40e-15 | 72.4 |
| Msa1190090 | AT3G55560.1 | 41.228 | 114 | 64 | 1 | 48 | 161 | 118 | 228 | 1.16e-14 | 72.0 |
| Msa1190090 | AT3G04570.1 | 39.344 | 122 | 62 | 2 | 48 | 161 | 110 | 227 | 1.04e-13 | 69.7 |
| Msa1190090 | AT1G76500.1 | 36.585 | 123 | 65 | 2 | 48 | 161 | 102 | 220 | 3.38e-13 | 67.8 |
| Msa1190090 | AT4G22810.1 | 40.171 | 117 | 63 | 2 | 48 | 161 | 135 | 247 | 1.35e-11 | 63.5 |
| Msa1190090 | AT2G45430.1 | 41.525 | 118 | 61 | 3 | 48 | 161 | 119 | 232 | 1.95e-11 | 63.2 |
Find 62 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGTCAGCCCGATTCTTC+TGG | 0.153062 | 8_1:+32973506 | Msa1190090:CDS |
| ACATCATGCTTCTGATTTCT+TGG | 0.217240 | 8_1:-32974347 | None:intergenic |
| TTTGAAATTCTGTCTTTATC+TGG | 0.274522 | 8_1:+32973733 | Msa1190090:CDS |
| AGATGATAATGCTCCTCTTT+TGG | 0.311022 | 8_1:+32972021 | Msa1190090:CDS |
| TTCGTCAGCCCGATTCTTCT+GGG | 0.316075 | 8_1:+32973507 | Msa1190090:CDS |
| GATATTAATGTGTCTCTTCC+TGG | 0.316878 | 8_1:+32974509 | Msa1190090:CDS |
| CTTCCTTCCGTGGAGATAAT+TGG | 0.333200 | 8_1:+32974444 | Msa1190090:CDS |
| TGGAGGAGTAGCTGGTTTGT+TGG | 0.341681 | 8_1:+32973849 | Msa1190090:CDS |
| GTTCCTCCTCCACTTTCATT+TGG | 0.347793 | 8_1:-32973766 | None:intergenic |
| AGGCGGCATGAGTGTGTCTT+TGG | 0.382271 | 8_1:+32973801 | Msa1190090:CDS |
| AGAAAATGAAATAACCTTCA+TGG | 0.401967 | 8_1:-32973423 | None:intergenic |
| GAATGGGTCCCTTGCTCTGT+TGG | 0.411486 | 8_1:+32973097 | Msa1190090:CDS |
| TTATCCTTTGCATCCGATGC+TGG | 0.421865 | 8_1:-32974476 | None:intergenic |
| GGAGGAACACGAAGCAGATC+AGG | 0.444348 | 8_1:+32973781 | Msa1190090:CDS |
| GTATGCATTCTTTCAGCAAA+TGG | 0.463040 | 8_1:+32973464 | Msa1190090:CDS |
| AGTCCTGATGGACGTGTTGT+TGG | 0.482154 | 8_1:+32973826 | Msa1190090:CDS |
| TTCTTGGCTTCTGCTCATGT+TGG | 0.484881 | 8_1:-32974331 | None:intergenic |
| GTTGTTGGTGGAGGAGTAGC+TGG | 0.488351 | 8_1:+32973841 | Msa1190090:CDS |
| CCACCAACAACACGTCCATC+AGG | 0.492937 | 8_1:-32973829 | None:intergenic |
| GTAGGGATGGGAACAACAGC+AGG | 0.496848 | 8_1:-32974389 | None:intergenic |
| TAGTAAGAACTTACTGACAT+AGG | 0.503684 | 8_1:-32972044 | None:intergenic |
| CACATCATCACTGTTAATGC+TGG | 0.504861 | 8_1:+32973136 | Msa1190090:CDS |
| GATAGAATAAATACCTGCAC+TGG | 0.507918 | 8_1:-32973883 | None:intergenic |
| GAAGTTACTGATGATAGAAT+AGG | 0.508118 | 8_1:-32974425 | None:intergenic |
| TACTGGATCAAGAGTAGGGA+TGG | 0.511973 | 8_1:-32974402 | None:intergenic |
| TCCTTATGAAATTAGCCTCC+AGG | 0.516288 | 8_1:-32974527 | None:intergenic |
| ATGTTAGGATGTTACCATGA+AGG | 0.517184 | 8_1:+32973409 | Msa1190090:intron |
| CTTACTTAGAATTATAGTGT+TGG | 0.517478 | 8_1:-32971975 | None:intergenic |
| ACTGATGATAGAATAGGTAC+TGG | 0.519373 | 8_1:-32974419 | None:intergenic |
| CCTGATGGACGTGTTGTTGG+TGG | 0.524712 | 8_1:+32973829 | Msa1190090:CDS |
| AGGAGTAGCTGGTTTGTTGG+TGG | 0.526402 | 8_1:+32973852 | Msa1190090:CDS |
| TCGTCAGCCCGATTCTTCTG+GGG | 0.541650 | 8_1:+32973508 | Msa1190090:CDS |
| CAGCATTAACAGTGATGATG+TGG | 0.544475 | 8_1:-32973135 | None:intergenic |
| ATAGGTACTGGATCAAGAGT+AGG | 0.547053 | 8_1:-32974407 | None:intergenic |
| GGTGGCTGCAAGTCCAGTGC+AGG | 0.550883 | 8_1:+32973870 | Msa1190090:CDS |
| ATGCCAAATGAAAGTGGAGG+AGG | 0.551611 | 8_1:+32973763 | Msa1190090:CDS |
| GTGTCTTTGGCAAGTCCTGA+TGG | 0.556787 | 8_1:+32973814 | Msa1190090:CDS |
| TCGTTCATGCCAAATGAAAG+TGG | 0.559940 | 8_1:+32973757 | Msa1190090:CDS |
| AAATTTGAACCAACAGAGCA+AGG | 0.567744 | 8_1:-32973106 | None:intergenic |
| TAGGTACTGGATCAAGAGTA+GGG | 0.580504 | 8_1:-32974406 | None:intergenic |
| GACACATTAATATCAGCAGC+GGG | 0.589557 | 8_1:-32974500 | None:intergenic |
| TTACTGACATAGGCCAAAAG+AGG | 0.594428 | 8_1:-32972034 | None:intergenic |
| CATCACTGTTAATGCTGGAG+AGG | 0.596487 | 8_1:+32973141 | Msa1190090:CDS |
| AATTTGAACCAACAGAGCAA+GGG | 0.597677 | 8_1:-32973105 | None:intergenic |
| TTGGTCTGCTGTGCCAGCAT+CGG | 0.597910 | 8_1:+32974463 | Msa1190090:CDS |
| GATGGACGTGTTGTTGGTGG+AGG | 0.601930 | 8_1:+32973832 | Msa1190090:CDS |
| TGTGCCAGCATCGGATGCAA+AGG | 0.609579 | 8_1:+32974472 | Msa1190090:CDS |
| TCATCAGTAACTTCCTTCCG+TGG | 0.610671 | 8_1:+32974434 | Msa1190090:CDS |
| GAAAGAATGCATACCGCTCG+AGG | 0.613852 | 8_1:-32973455 | None:intergenic |
| TGTATCTACCAGGTAGTGGT+TGG | 0.624215 | 8_1:+32974290 | Msa1190090:intron |
| AGACCAATTATCTCCACGGA+AGG | 0.635192 | 8_1:-32974447 | None:intergenic |
| TTCTCAGCAAGGACCTCGAG+CGG | 0.641808 | 8_1:+32973442 | Msa1190090:CDS |
| AGCATTAACAGTGATGATGT+GGG | 0.643782 | 8_1:-32973134 | None:intergenic |
| ACTGGATCAAGAGTAGGGAT+GGG | 0.644029 | 8_1:-32974401 | None:intergenic |
| CAGCAGACCAATTATCTCCA+CGG | 0.646524 | 8_1:-32974451 | None:intergenic |
| AGACACATTAATATCAGCAG+CGG | 0.659162 | 8_1:-32974501 | None:intergenic |
| AACAACAGCAGGAGATGACA+CGG | 0.660123 | 8_1:-32974378 | None:intergenic |
| GGAACACGAAGCAGATCAGG+CGG | 0.674892 | 8_1:+32973784 | Msa1190090:CDS |
| AAGAAATCAGAAGCATGATG+TGG | 0.682976 | 8_1:+32974349 | Msa1190090:CDS |
| ATTAATGTGTCTCTTCCTGG+AGG | 0.686956 | 8_1:+32974512 | Msa1190090:CDS |
| TTCATGCCAAATGAAAGTGG+AGG | 0.721594 | 8_1:+32973760 | Msa1190090:CDS |
| GCATTAACAGTGATGATGTG+GGG | 0.743775 | 8_1:-32973133 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTATTTTATATTTTACTAA+TGG | + | chr8_1:32972279-32972298 | Msa1190090:intron | 10.0% |
| !! | AATTAAAAGTTAAACAAAAA+GGG | - | chr8_1:32972568-32972587 | None:intergenic | 10.0% |
| !! | AAATATTCAAATTCTTAATT+TGG | + | chr8_1:32972981-32973000 | Msa1190090:intron | 10.0% |
| !!! | TTTTTTGTAGAATAAAATTA+GGG | + | chr8_1:32973240-32973259 | Msa1190090:intron | 10.0% |
| !! | GAATTAAAAGTTAAACAAAA+AGG | - | chr8_1:32972569-32972588 | None:intergenic | 15.0% |
| !!! | TTTGTAATTCTCTAAAAATT+TGG | + | chr8_1:32972675-32972694 | Msa1190090:intron | 15.0% |
| !!! | TGTTAACATTTACATTTTTT+AGG | + | chr8_1:32973073-32973092 | Msa1190090:intron | 15.0% |
| !!! | GTTTTTTGTAGAATAAAATT+AGG | + | chr8_1:32973239-32973258 | Msa1190090:intron | 15.0% |
| !! | ACTATTTCAATATCTTAGTT+TGG | + | chr8_1:32972195-32972214 | Msa1190090:intron | 20.0% |
| !! | AAAACAATGTATGGAAAAAA+AGG | - | chr8_1:32972492-32972511 | None:intergenic | 20.0% |
| !! | AATTAACTCAAAACAATGTA+TGG | - | chr8_1:32972501-32972520 | None:intergenic | 20.0% |
| !! | AATTAACTCAAAACAATGTA+TGG | - | chr8_1:32972501-32972520 | None:intergenic | 20.0% |
| !! | ATATGTAAAAGCAGAAATTT+GGG | - | chr8_1:32972632-32972651 | None:intergenic | 20.0% |
| !!! | GCATTTAGTTTCATATTAAA+TGG | + | chr8_1:32972768-32972787 | Msa1190090:intron | 20.0% |
| !! | ATTGAAAATGATAAAAGTCT+CGG | - | chr8_1:32973038-32973057 | None:intergenic | 20.0% |
| !!! | ATTTACATTTTTTAGGTGAA+TGG | + | chr8_1:32973080-32973099 | Msa1190090:intron | 20.0% |
| !!! | TTTACATTTTTTAGGTGAAT+GGG | + | chr8_1:32973081-32973100 | Msa1190090:intron | 20.0% |
| !!! | TTGAATGAACCTTTTTAATT+TGG | + | chr8_1:32973970-32973989 | Msa1190090:intron | 20.0% |
| ! | CTTACTTAGAATTATAGTGT+TGG | - | chr8_1:32971978-32971997 | None:intergenic | 25.0% |
| !! | ACTCATTTGTTGAGAATTTA+TGG | + | chr8_1:32972077-32972096 | Msa1190090:intron | 25.0% |
| ! | CGTCATTCATTGAAAATTAT+AGG | - | chr8_1:32972383-32972402 | None:intergenic | 25.0% |
| !!! | AAGCTTCTAAATTTGCTAAT+TGG | + | chr8_1:32972593-32972612 | Msa1190090:intron | 25.0% |
| ! | CATATGTAAAAGCAGAAATT+TGG | - | chr8_1:32972633-32972652 | None:intergenic | 25.0% |
| !!! | ACAAAGCTAAAGTTTTAAGT+TGG | - | chr8_1:32972660-32972679 | None:intergenic | 25.0% |
| ! | TCTATGCTGTCTTATATATT+AGG | + | chr8_1:32972851-32972870 | Msa1190090:intron | 25.0% |
| ! | TCTTAGAATCTTATTCTCTT+AGG | + | chr8_1:32972920-32972939 | Msa1190090:intron | 25.0% |
| !!! | TTATAAGGCGTCTATAATTT+TGG | - | chr8_1:32973007-32973026 | None:intergenic | 25.0% |
| ! | ATAAACAGAATAAAAGTGAG+AGG | + | chr8_1:32973270-32973289 | Msa1190090:intron | 25.0% |
| ! | TAAACAGAATAAAAGTGAGA+GGG | + | chr8_1:32973271-32973290 | Msa1190090:intron | 25.0% |
| ! | AGAAAATGAAATAACCTTCA+TGG | - | chr8_1:32973426-32973445 | None:intergenic | 25.0% |
| ! | TATAGAAGAGAACTTTCATT+TGG | + | chr8_1:32973586-32973605 | Msa1190090:intron | 25.0% |
| !! | TTTGAAATTCTGTCTTTATC+TGG | + | chr8_1:32973733-32973752 | Msa1190090:CDS | 25.0% |
| ! | TAAGAGTTATCTTTCTCAAA+TGG | - | chr8_1:32974077-32974096 | None:intergenic | 25.0% |
| TAGTAAGAACTTACTGACAT+AGG | - | chr8_1:32972047-32972066 | None:intergenic | 30.0% | |
| ! | TCAGTACACAGTTTTTAACA+TGG | - | chr8_1:32972233-32972252 | None:intergenic | 30.0% |
| ! | AAAAACTGTGTACTGAGTTT+TGG | + | chr8_1:32972237-32972256 | Msa1190090:intron | 30.0% |
| TATCTTATATCAGGTAGTCA+AGG | - | chr8_1:32972798-32972817 | None:intergenic | 30.0% | |
| GAGGGTAAATATCTTATATC+AGG | - | chr8_1:32972807-32972826 | None:intergenic | 30.0% | |
| ! | TGATATAAAGCATCTTGAGA+TGG | + | chr8_1:32972881-32972900 | Msa1190090:intron | 30.0% |
| TATGCTGTAATCCTGTTATT+TGG | + | chr8_1:32973188-32973207 | Msa1190090:intron | 30.0% | |
| ! | ATGCTGTAATCCTGTTATTT+GGG | + | chr8_1:32973189-32973208 | Msa1190090:intron | 30.0% |
| ! | TTTTCAATTCCCCAAATAAC+AGG | - | chr8_1:32973202-32973221 | None:intergenic | 30.0% |
| !!! | ACTTCTTTTTCAGTGATAAC+TGG | + | chr8_1:32973341-32973360 | Msa1190090:intron | 30.0% |
| TTTGTGTGTATGGTTATGTT+AGG | + | chr8_1:32973394-32973413 | Msa1190090:intron | 30.0% | |
| !! | GTTATTTCATTTTCTCAGCA+AGG | + | chr8_1:32973431-32973450 | Msa1190090:CDS | 30.0% |
| GAAAGTTCTCTTCTATAAGA+TGG | - | chr8_1:32973583-32973602 | None:intergenic | 30.0% | |
| GTAGATCATTAAATGCATTG+TGG | - | chr8_1:32973614-32973633 | None:intergenic | 30.0% | |
| AGGTATTTATTCTATCCGTA+AGG | + | chr8_1:32973890-32973909 | Msa1190090:intron | 30.0% | |
| GGTATTTATTCTATCCGTAA+GGG | + | chr8_1:32973891-32973910 | Msa1190090:intron | 30.0% | |
| ATTTGCAAAATTCTCCCTTA+CGG | - | chr8_1:32973908-32973927 | None:intergenic | 30.0% | |
| TGAATCACGCCAAATTAAAA+AGG | - | chr8_1:32973982-32974001 | None:intergenic | 30.0% | |
| ! | GAATGTTTGTTTGCTAGAAA+TGG | - | chr8_1:32974175-32974194 | None:intergenic | 30.0% |
| TCTAGCAAACAAACATTCAA+TGG | + | chr8_1:32974177-32974196 | Msa1190090:intron | 30.0% | |
| TTATAGCAACATGAATAAGC+TGG | + | chr8_1:32974208-32974227 | Msa1190090:intron | 30.0% | |
| ! | GGTAGATACATGTTTGAAAT+TGG | - | chr8_1:32974280-32974299 | None:intergenic | 30.0% |
| ATTTCAAACATGTATCTACC+AGG | + | chr8_1:32974280-32974299 | Msa1190090:intron | 30.0% | |
| GAAGTTACTGATGATAGAAT+AGG | - | chr8_1:32974428-32974447 | None:intergenic | 30.0% | |
| !! | AGATGATAATGCTCCTCTTT+TGG | + | chr8_1:32972021-32972040 | Msa1190090:CDS | 35.0% |
| GATACAATACACATCCGATA+CGG | - | chr8_1:32972411-32972430 | None:intergenic | 35.0% | |
| GTTTCTTGTCTGTGATTCAT+AGG | + | chr8_1:32972439-32972458 | Msa1190090:intron | 35.0% | |
| AATTTGAACCAACAGAGCAA+GGG | - | chr8_1:32973108-32973127 | None:intergenic | 35.0% | |
| AAATTTGAACCAACAGAGCA+AGG | - | chr8_1:32973109-32973128 | None:intergenic | 35.0% | |
| ! | AGCATTAACAGTGATGATGT+GGG | - | chr8_1:32973137-32973156 | None:intergenic | 35.0% |
| ! | TGCTGTAATCCTGTTATTTG+GGG | + | chr8_1:32973190-32973209 | Msa1190090:intron | 35.0% |
| ! | TGTCAGCAATTTTGTGTGTA+TGG | + | chr8_1:32973384-32973403 | Msa1190090:intron | 35.0% |
| ATGTTAGGATGTTACCATGA+AGG | + | chr8_1:32973409-32973428 | Msa1190090:intron | 35.0% | |
| GTATGCATTCTTTCAGCAAA+TGG | + | chr8_1:32973464-32973483 | Msa1190090:CDS | 35.0% | |
| !! | TGCCTTTTTGAGCATATAGT+GGG | + | chr8_1:32973658-32973677 | Msa1190090:intron | 35.0% |
| ATCCCACTATATGCTCAAAA+AGG | - | chr8_1:32973663-32973682 | None:intergenic | 35.0% | |
| !! | TTTTGAGCATATAGTGGGAT+TGG | + | chr8_1:32973663-32973682 | Msa1190090:intron | 35.0% |
| GATAGAATAAATACCTGCAC+TGG | - | chr8_1:32973886-32973905 | None:intergenic | 35.0% | |
| ! | TTAATTTGGCGTGATTCAAG+TGG | + | chr8_1:32973984-32974003 | Msa1190090:intron | 35.0% |
| GAAATGGAGTTGTCATTGTA+AGG | - | chr8_1:32974159-32974178 | None:intergenic | 35.0% | |
| ACATCATGCTTCTGATTTCT+TGG | - | chr8_1:32974350-32974369 | None:intergenic | 35.0% | |
| ! | AAGAAATCAGAAGCATGATG+TGG | + | chr8_1:32974349-32974368 | Msa1190090:CDS | 35.0% |
| ACTGATGATAGAATAGGTAC+TGG | - | chr8_1:32974422-32974441 | None:intergenic | 35.0% | |
| AGACACATTAATATCAGCAG+CGG | - | chr8_1:32974504-32974523 | None:intergenic | 35.0% | |
| GATATTAATGTGTCTCTTCC+TGG | + | chr8_1:32974509-32974528 | Msa1190090:CDS | 35.0% | |
| TTACTGACATAGGCCAAAAG+AGG | - | chr8_1:32972037-32972056 | None:intergenic | 40.0% | |
| GTCTCGGCGTTTCAATTATA+AGG | - | chr8_1:32973022-32973041 | None:intergenic | 40.0% | |
| ! | GCATTAACAGTGATGATGTG+GGG | - | chr8_1:32973136-32973155 | None:intergenic | 40.0% |
| ! | CAGCATTAACAGTGATGATG+TGG | - | chr8_1:32973138-32973157 | None:intergenic | 40.0% |
| CACATCATCACTGTTAATGC+TGG | + | chr8_1:32973136-32973155 | Msa1190090:CDS | 40.0% | |
| AGTGATCACACAGATATGAC+AGG | - | chr8_1:32973320-32973339 | None:intergenic | 40.0% | |
| !! | GTGCCTTTTTGAGCATATAG+TGG | + | chr8_1:32973657-32973676 | Msa1190090:intron | 40.0% |
| !! | ACTTATCTCGGTGTTTCTAC+AGG | + | chr8_1:32973705-32973724 | Msa1190090:intron | 40.0% |
| !! | CTTATCTCGGTGTTTCTACA+GGG | + | chr8_1:32973706-32973725 | Msa1190090:intron | 40.0% |
| TCGTTCATGCCAAATGAAAG+TGG | + | chr8_1:32973757-32973776 | Msa1190090:CDS | 40.0% | |
| TTCATGCCAAATGAAAGTGG+AGG | + | chr8_1:32973760-32973779 | Msa1190090:CDS | 40.0% | |
| GTTTGAGTCTCTTAAGCATG+TGG | + | chr8_1:32974013-32974032 | Msa1190090:intron | 40.0% | |
| AACATGTATCTACCAGGTAG+TGG | + | chr8_1:32974286-32974305 | Msa1190090:intron | 40.0% | |
| TAAAACTACCAACCACTACC+TGG | - | chr8_1:32974301-32974320 | None:intergenic | 40.0% | |
| !!! | GGTAGTGGTTGGTAGTTTTA+TGG | + | chr8_1:32974301-32974320 | Msa1190090:intron | 40.0% |
| !! | TAGGTACTGGATCAAGAGTA+GGG | - | chr8_1:32974409-32974428 | None:intergenic | 40.0% |
| !! | ATAGGTACTGGATCAAGAGT+AGG | - | chr8_1:32974410-32974429 | None:intergenic | 40.0% |
| GACACATTAATATCAGCAGC+GGG | - | chr8_1:32974503-32974522 | None:intergenic | 40.0% | |
| ATTAATGTGTCTCTTCCTGG+AGG | + | chr8_1:32974512-32974531 | Msa1190090:CDS | 40.0% | |
| CTGAGTTGCATGCAATCTAC+CGG | + | chr8_1:32972144-32972163 | Msa1190090:intron | 45.0% | |
| TGAATGACGAATCGCCGTAT+CGG | + | chr8_1:32972394-32972413 | Msa1190090:intron | 45.0% | |
| CATCACTGTTAATGCTGGAG+AGG | + | chr8_1:32973141-32973160 | Msa1190090:CDS | 45.0% | |
| GCACGCACAGTTACTTATCT+CGG | + | chr8_1:32973693-32973712 | Msa1190090:intron | 45.0% | |
| ATGCCAAATGAAAGTGGAGG+AGG | + | chr8_1:32973763-32973782 | Msa1190090:CDS | 45.0% | |
| GTTCCTCCTCCACTTTCATT+TGG | - | chr8_1:32973769-32973788 | None:intergenic | 45.0% | |
| TTTGGCGTGATTCAAGTGGT+CGG | + | chr8_1:32973988-32974007 | Msa1190090:intron | 45.0% | |
| GTCTCTTAAGCATGTGGTCA+TGG | + | chr8_1:32974019-32974038 | Msa1190090:intron | 45.0% | |
| ! | TGTATCTACCAGGTAGTGGT+TGG | + | chr8_1:32974290-32974309 | Msa1190090:intron | 45.0% |
| !!! | GTGGTTGGTAGTTTTATGGC+AGG | + | chr8_1:32974305-32974324 | Msa1190090:CDS | 45.0% |
| TTCTTGGCTTCTGCTCATGT+TGG | - | chr8_1:32974334-32974353 | None:intergenic | 45.0% | |
| AACAACAGCAGGAGATGACA+CGG | - | chr8_1:32974381-32974400 | None:intergenic | 45.0% | |
| ACTGGATCAAGAGTAGGGAT+GGG | - | chr8_1:32974404-32974423 | None:intergenic | 45.0% | |
| TACTGGATCAAGAGTAGGGA+TGG | - | chr8_1:32974405-32974424 | None:intergenic | 45.0% | |
| TCATCAGTAACTTCCTTCCG+TGG | + | chr8_1:32974434-32974453 | Msa1190090:CDS | 45.0% | |
| CTTCCTTCCGTGGAGATAAT+TGG | + | chr8_1:32974444-32974463 | Msa1190090:CDS | 45.0% | |
| AGACCAATTATCTCCACGGA+AGG | - | chr8_1:32974450-32974469 | None:intergenic | 45.0% | |
| CAGCAGACCAATTATCTCCA+CGG | - | chr8_1:32974454-32974473 | None:intergenic | 45.0% | |
| TTATCCTTTGCATCCGATGC+TGG | - | chr8_1:32974479-32974498 | None:intergenic | 45.0% | |
| TGCATGCAATCTACCGGTGT+TGG | + | chr8_1:32972150-32972169 | Msa1190090:intron | 50.0% | |
| !! | CAATCTACCGGTGTTGGTGA+AGG | + | chr8_1:32972156-32972175 | Msa1190090:intron | 50.0% |
| ATCTCCTCCTTCACCAACAC+CGG | - | chr8_1:32972166-32972185 | None:intergenic | 50.0% | |
| AGTGCAGCAGCAATCTGAGA+GGG | - | chr8_1:32972825-32972844 | None:intergenic | 50.0% | |
| GAAAGAATGCATACCGCTCG+AGG | - | chr8_1:32973458-32973477 | None:intergenic | 50.0% | |
| TTCGTCAGCCCGATTCTTCT+GGG | + | chr8_1:32973507-32973526 | Msa1190090:CDS | 50.0% | |
| AATGTGCCCCCAGAAGAATC+GGG | - | chr8_1:32973518-32973537 | None:intergenic | 50.0% | |
| CAATGTGCCCCCAGAAGAAT+CGG | - | chr8_1:32973519-32973538 | None:intergenic | 50.0% | |
| ! | TGGGGGCACATTGACATATG+AGG | + | chr8_1:32973526-32973545 | Msa1190090:CDS | 50.0% |
| GTGTCTTTGGCAAGTCCTGA+TGG | + | chr8_1:32973814-32973833 | Msa1190090:CDS | 50.0% | |
| ! | AGTCCTGATGGACGTGTTGT+TGG | + | chr8_1:32973826-32973845 | Msa1190090:CDS | 50.0% |
| !! | TGGAGGAGTAGCTGGTTTGT+TGG | + | chr8_1:32973849-32973868 | Msa1190090:CDS | 50.0% |
| !! | AGGAGTAGCTGGTTTGTTGG+TGG | + | chr8_1:32973852-32973871 | Msa1190090:CDS | 50.0% |
| !! | TCTACCGGTGTTGGTGAAGG+AGG | + | chr8_1:32972159-32972178 | Msa1190090:intron | 55.0% |
| CAGTGCAGCAGCAATCTGAG+AGG | - | chr8_1:32972826-32972845 | None:intergenic | 55.0% | |
| GAATGGGTCCCTTGCTCTGT+TGG | + | chr8_1:32973097-32973116 | Msa1190090:CDS | 55.0% | |
| TTCTCAGCAAGGACCTCGAG+CGG | + | chr8_1:32973442-32973461 | Msa1190090:CDS | 55.0% | |
| CTTCGTCAGCCCGATTCTTC+TGG | + | chr8_1:32973506-32973525 | Msa1190090:CDS | 55.0% | |
| TCGTCAGCCCGATTCTTCTG+GGG | + | chr8_1:32973508-32973527 | Msa1190090:CDS | 55.0% | |
| GGAGGAACACGAAGCAGATC+AGG | + | chr8_1:32973781-32973800 | Msa1190090:CDS | 55.0% | |
| GGAACACGAAGCAGATCAGG+CGG | + | chr8_1:32973784-32973803 | Msa1190090:CDS | 55.0% | |
| AGGCGGCATGAGTGTGTCTT+TGG | + | chr8_1:32973801-32973820 | Msa1190090:CDS | 55.0% | |
| CCACCAACAACACGTCCATC+AGG | - | chr8_1:32973832-32973851 | None:intergenic | 55.0% | |
| ! | CCTGATGGACGTGTTGTTGG+TGG | + | chr8_1:32973829-32973848 | Msa1190090:CDS | 55.0% |
| ! | GATGGACGTGTTGTTGGTGG+AGG | + | chr8_1:32973832-32973851 | Msa1190090:CDS | 55.0% |
| ! | GTTGTTGGTGGAGGAGTAGC+TGG | + | chr8_1:32973841-32973860 | Msa1190090:CDS | 55.0% |
| GTAGGGATGGGAACAACAGC+AGG | - | chr8_1:32974392-32974411 | None:intergenic | 55.0% | |
| TTGGTCTGCTGTGCCAGCAT+CGG | + | chr8_1:32974463-32974482 | Msa1190090:CDS | 55.0% | |
| ! | TGTGCCAGCATCGGATGCAA+AGG | + | chr8_1:32974472-32974491 | Msa1190090:CDS | 55.0% |
| CGTCAGCCCGATTCTTCTGG+GGG | + | chr8_1:32973509-32973528 | Msa1190090:CDS | 60.0% | |
| GGCGTGATTCAAGTGGTCGG+TGG | + | chr8_1:32973991-32974010 | Msa1190090:intron | 60.0% | |
| GGTGGCTGCAAGTCCAGTGC+AGG | + | chr8_1:32973870-32973889 | Msa1190090:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 32971953 | 32974538 | 32971953 | ID=Msa1190090;Name=Msa1190090 |
| chr8_1 | mRNA | 32971953 | 32974538 | 32971953 | ID=Msa1190090-mRNA-1;Parent=Msa1190090;Name=Msa1190090-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0|0.8|1|1|5|0|233 |
| chr8_1 | exon | 32971953 | 32972052 | 32971953 | ID=Msa1190090-mRNA-1:exon:11075;Parent=Msa1190090-mRNA-1 |
| chr8_1 | exon | 32973095 | 32973162 | 32973095 | ID=Msa1190090-mRNA-1:exon:11076;Parent=Msa1190090-mRNA-1 |
| chr8_1 | exon | 32973416 | 32973547 | 32973416 | ID=Msa1190090-mRNA-1:exon:11077;Parent=Msa1190090-mRNA-1 |
| chr8_1 | exon | 32973727 | 32973891 | 32973727 | ID=Msa1190090-mRNA-1:exon:11078;Parent=Msa1190090-mRNA-1 |
| chr8_1 | exon | 32974302 | 32974538 | 32974302 | ID=Msa1190090-mRNA-1:exon:11079;Parent=Msa1190090-mRNA-1 |
| chr8_1 | CDS | 32971953 | 32972052 | 32971953 | ID=Msa1190090-mRNA-1:cds;Parent=Msa1190090-mRNA-1 |
| chr8_1 | CDS | 32973095 | 32973162 | 32973095 | ID=Msa1190090-mRNA-1:cds;Parent=Msa1190090-mRNA-1 |
| chr8_1 | CDS | 32973416 | 32973547 | 32973416 | ID=Msa1190090-mRNA-1:cds;Parent=Msa1190090-mRNA-1 |
| chr8_1 | CDS | 32973727 | 32973891 | 32973727 | ID=Msa1190090-mRNA-1:cds;Parent=Msa1190090-mRNA-1 |
| chr8_1 | CDS | 32974302 | 32974538 | 32974302 | ID=Msa1190090-mRNA-1:cds;Parent=Msa1190090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
