AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1079610


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1079610 MtrunA17_Chr7g0264861 96.774 620 18 1 1 620 1 618 0.0 1216
Msa1079610 MtrunA17_Chr1g0210291 63.333 600 194 7 18 609 14 595 0.0 757
Msa1079610 MtrunA17_Chr1g0210274 63.729 590 203 4 19 608 16 594 0.0 751
Msa1079610 MtrunA17_Chr1g0210284 63.761 585 195 5 19 603 16 583 0.0 742
Msa1079610 MtrunA17_Chr1g0171591 57.095 599 239 5 13 603 8 596 0.0 682
Msa1079610 MtrunA17_Chr1g0174101 53.613 595 253 6 9 597 4 581 0.0 647
Msa1079610 MtrunA17_Chr7g0225191 35.355 577 331 8 25 570 11 576 3.21e-105 330
Msa1079610 MtrunA17_Chr2g0330551 32.696 575 327 8 26 580 4 538 2.14e-104 326
Msa1079610 MtrunA17_Chr5g0442481 34.783 552 311 12 29 570 11 523 1.84e-101 318
Msa1079610 MtrunA17_Chr3g0132161 34.884 559 329 9 29 571 15 554 7.33e-97 307
Msa1079610 MtrunA17_Chr4g0037301 34.432 546 329 9 29 571 15 534 7.70e-93 296
Msa1079610 MtrunA17_Chr5g0405621 31.560 564 344 9 29 590 13 536 1.75e-83 271
Msa1079610 MtrunA17_Chr2g0304561 30.935 556 355 8 30 571 13 553 4.16e-74 248
Msa1079610 MtrunA17_Chr4g0064981 29.234 561 365 11 30 571 12 559 4.20e-74 248
Msa1079610 MtrunA17_Chr7g0251871 26.516 577 386 15 29 585 7 565 3.60e-38 149
Msa1079610 MtrunA17_Chr3g0106801 26.055 545 367 9 26 570 4 512 1.19e-36 144
Msa1079610 MtrunA17_Chr2g0333371 32.035 231 114 5 341 571 102 289 1.06e-32 128
Msa1079610 MtrunA17_Chr5g0408921 25.829 573 389 18 29 579 7 565 5.31e-28 119
Msa1079610 MtrunA17_Chr8g0369621 23.570 577 397 17 29 579 48 606 7.39e-24 106
Msa1079610 MtrunA17_Chr3g0106821 24.675 385 267 7 27 411 5 366 6.49e-21 95.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1079610 AT2G39210.1 63.069 593 202 5 19 606 11 591 0.0 745
Msa1079610 AT2G28120.1 57.886 577 228 4 18 594 6 567 0.0 672
Msa1079610 AT1G74780.1 36.411 574 307 7 24 581 2 533 2.58e-112 347
Msa1079610 AT1G18940.1 35.552 571 298 9 24 577 4 521 1.20e-108 337
Msa1079610 AT5G14120.1 36.111 576 336 8 26 579 13 578 2.57e-106 333
Msa1079610 AT2G34355.1 35.778 559 304 8 29 577 7 520 9.22e-106 330
Msa1079610 AT5G50630.1 36.051 552 314 12 25 570 12 530 1.79e-104 327
Msa1079610 AT5G50520.1 36.051 552 314 12 25 570 12 530 1.79e-104 327
Msa1079610 AT2G34350.1 36.559 558 289 8 29 570 7 515 7.51e-103 322
Msa1079610 AT2G34350.2 36.559 558 289 8 29 570 7 515 7.51e-103 322
Msa1079610 AT3G01930.2 33.447 589 359 6 16 579 3 583 1.42e-101 321
Msa1079610 AT2G16660.1 34.664 551 318 9 29 571 14 530 4.07e-91 292
Msa1079610 AT4G34950.1 32.379 559 337 8 29 570 16 550 1.93e-90 291
Msa1079610 AT1G80530.1 30.287 558 348 9 30 572 14 545 7.67e-75 250
Msa1079610 AT3G01930.1 32.427 478 290 6 127 579 1 470 1.87e-72 241
Msa1079610 AT2G34355.2 35.990 414 218 8 166 577 2 370 3.99e-67 224
Msa1079610 AT3G01930.3 31.963 438 268 4 16 428 3 435 2.51e-65 221
Msa1079610 AT2G16660.2 33.666 401 233 8 29 421 14 389 4.01e-53 187
Msa1079610 AT4G19450.1 26.298 578 379 18 29 579 7 564 6.51e-32 130
Msa1079610 AT5G45275.1 26.117 582 359 17 29 571 7 556 3.20e-31 129
Msa1079610 AT2G30300.1 25.960 547 341 12 30 570 8 496 6.48e-29 121
Msa1079610 AT3G01630.1 24.329 559 370 15 29 571 23 544 1.01e-27 118
Msa1079610 AT3G01630.2 24.329 559 370 15 29 571 41 562 1.20e-27 118
Msa1079610 AT1G31470.1 23.784 555 377 18 29 571 43 563 1.26e-26 115
Msa1079610 AT4G19450.2 27.427 412 262 13 29 414 7 407 2.61e-23 103

Find 107 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTCAACTTTGTACAATTT+TGG 0.125037 7_2:+78843532 Msa1079610:CDS
ATTAACAGCGATCGATAATT+TGG 0.128535 7_2:+78843201 Msa1079610:CDS
ATTACAGCATCAACTTTAAT+TGG 0.174590 7_2:+78843721 Msa1079610:CDS
AAAACACTACCACGACTATT+AGG 0.179253 7_2:-78842539 None:intergenic
TACTTTGCGTCAGTGATTAT+TGG 0.204893 7_2:+78843442 Msa1079610:CDS
TTGAGAAAGTTAACATGTTT+TGG 0.227175 7_2:-78842826 None:intergenic
TATATTTCACTTGGTCTTGC+TGG 0.234161 7_2:+78842779 Msa1079610:CDS
ATTTATCATAGTTTATATTA+TGG 0.240602 7_2:+78842611 Msa1079610:CDS
GGACAAATTGGTCATTCATT+AGG 0.259260 7_2:+78843223 Msa1079610:CDS
ATCGATAATTTGGGACAAAT+TGG 0.294649 7_2:+78843211 Msa1079610:CDS
GTGTAGTCTTCACCTCTATT+AGG 0.296409 7_2:-78843106 None:intergenic
GACAAATTGGTCATTCATTA+GGG 0.303260 7_2:+78843224 Msa1079610:CDS
AGACACATTTGCCAAACTTT+AGG 0.304682 7_2:-78842443 None:intergenic
GAGGTTACTCGTAGTCTTCC+AGG 0.313637 7_2:+78843916 Msa1079610:CDS
AGAAGCTTTGAAACAATTAG+AGG 0.327996 7_2:+78843621 Msa1079610:CDS
GTTTAGAGTTGTTTGGTCAT+AGG 0.368898 7_2:-78842261 None:intergenic
GGGATATATATGAAAAGTAT+AGG 0.370258 7_2:+78843794 Msa1079610:CDS
AAATTCATACACCTAAAGTT+TGG 0.373588 7_2:+78842432 Msa1079610:CDS
AAAGGTTATGTTGGTTTAAG+TGG 0.379908 7_2:+78842572 Msa1079610:CDS
AAACACTACCACGACTATTA+GGG 0.381760 7_2:-78842538 None:intergenic
CCTTGGGTTGTTCTCTTAAC+CGG 0.386871 7_2:+78842356 Msa1079610:CDS
AATTTCAAAATTCTAATAGT+TGG 0.391290 7_2:-78842707 None:intergenic
GACATGTTCTGAAGTGGAAC+TGG 0.407670 7_2:-78842989 None:intergenic
ATATTGAAGTATCCTTCAAT+AGG 0.410247 7_2:-78842940 None:intergenic
TAAGGAGGTTTAGAGTTGTT+TGG 0.421800 7_2:-78842268 None:intergenic
TTGTGTCGCTGGTGAGCATA+TGG 0.429955 7_2:+78843272 Msa1079610:CDS
TGTGATTTCATTGATTAAAC+CGG 0.431273 7_2:-78842330 None:intergenic
GTCATGCTTCTCTCTTGTGT+TGG 0.442120 7_2:+78843382 Msa1079610:CDS
ACAAGAAAAGCAGTTCTTGT+TGG 0.442506 7_2:+78843065 Msa1079610:CDS
TTCTCAAGGATTGAGTGTAT+TGG 0.445278 7_2:+78842842 Msa1079610:CDS
GACCACGACAACACCACATT+AGG 0.448744 7_2:+78843886 Msa1079610:CDS
TTTGAAACAATTAGAGGCTA+AGG 0.449122 7_2:+78843627 Msa1079610:CDS
CAATGAAATCACACCACCTT+GGG 0.449615 7_2:+78842340 Msa1079610:CDS
TTGTTCCTTTCCAACTATTG+AGG 0.457456 7_2:-78842112 None:intergenic
GAACAACATACAACAACAAA+AGG 0.460232 7_2:+78842730 Msa1079610:CDS
ATATTCAATGTGAGAGTGGC+TGG 0.460635 7_2:+78843583 Msa1079610:CDS
GGATATATATGAAAAGTATA+GGG 0.460797 7_2:+78843795 Msa1079610:CDS
TTAACAGCGATCGATAATTT+GGG 0.465416 7_2:+78843202 Msa1079610:CDS
CAAATTCAACAACCTATTGA+AGG 0.472074 7_2:+78842928 Msa1079610:CDS
TATCTAGGACGGGTTGCATC+GGG 0.477814 7_2:+78843298 Msa1079610:CDS
TCTACTTCTTCCACTTGTTG+TGG 0.484078 7_2:+78842889 Msa1079610:CDS
GGGAAGGACTTGACTTGTGT+TGG 0.484414 7_2:+78843667 Msa1079610:CDS
TAAGGGACTTAGAAGACAAA+AGG 0.484940 7_2:+78843645 Msa1079610:CDS
GCCAACGTCGGTGTTATCTC+CGG 0.485511 7_2:+78842311 Msa1079610:CDS
GCAGGTGCAACATACATGTT+TGG 0.486048 7_2:+78842206 Msa1079610:CDS
AAAAGAAAAGAAACAGCAGC+AGG 0.487359 7_2:-78842680 None:intergenic
CTATCTAGGACGGGTTGCAT+CGG 0.488175 7_2:+78843297 Msa1079610:CDS
GTGAGCATATGGAACTATCT+AGG 0.489747 7_2:+78843283 Msa1079610:CDS
CCAATGGTGTCCTCAATAGT+TGG 0.495651 7_2:+78842102 Msa1079610:CDS
CCAACTATTGAGGACACCAT+TGG 0.496349 7_2:-78842102 None:intergenic
TGGAGTAGAGTGTTATAGAA+TGG 0.496401 7_2:+78843687 Msa1079610:CDS
GATATGATTGCAAACATCAA+TGG 0.506011 7_2:-78843487 None:intergenic
TCACTAATCATGTCCGTAGC+AGG 0.510061 7_2:+78842188 Msa1079610:CDS
TGTTTGGTCATAGGATAAAG+AGG 0.510244 7_2:-78842252 None:intergenic
CATGTATGTTGCACCTGCTA+CGG 0.511700 7_2:-78842201 None:intergenic
CGAGGTCTTTGAAGAAACTA+AGG 0.516799 7_2:-78842286 None:intergenic
GTATTTGGTTAACAAAATCT+CGG 0.518125 7_2:-78843329 None:intergenic
TAGTCTTCACCTCTATTAGG+AGG 0.519398 7_2:-78843103 None:intergenic
AAAACATGTTAACTTTCTCA+AGG 0.522886 7_2:+78842828 Msa1079610:CDS
CTTAGTTTCTTCAAAGACCT+CGG 0.526978 7_2:+78842287 Msa1079610:CDS
ATGACAAAAGTGAGCAGATA+CGG 0.527866 7_2:-78843364 None:intergenic
TGGAGCTGTGGCAAGTCCTG+TGG 0.539827 7_2:+78843552 Msa1079610:CDS
AGAAAAGCAGTTCTTGTTGG+AGG 0.540370 7_2:+78843068 Msa1079610:CDS
AATCTTCTTTATATTTCACT+TGG 0.545702 7_2:+78842770 Msa1079610:CDS
AAGGGACTTAGAAGACAAAA+GGG 0.546304 7_2:+78843646 Msa1079610:CDS
ATGTGTCTTTATATTTGCAT+TGG 0.546883 7_2:+78842458 Msa1079610:CDS
CAACACCAAAAGTTGTTGCT+AGG 0.549019 7_2:-78843171 None:intergenic
ATATTCAAACCTCCTAATAG+AGG 0.550040 7_2:+78843094 Msa1079610:CDS
GGTGTCCTCAATAGTTGGAA+AGG 0.552334 7_2:+78842107 Msa1079610:CDS
TCAATGAAATCACACCACCT+TGG 0.555077 7_2:+78842339 Msa1079610:CDS
CGCCTAATGTGGTGTTGTCG+TGG 0.556806 7_2:-78843888 None:intergenic
TTGAAACAATTAGAGGCTAA+GGG 0.557329 7_2:+78843628 Msa1079610:CDS
TCTCTAAATACCACAACAAG+TGG 0.558404 7_2:-78842899 None:intergenic
ACTCGTAGTCTTCCAGGGTA+AGG 0.561027 7_2:+78843922 Msa1079610:CDS
GTCATCACACGAACAAGAAG+CGG 0.569693 7_2:+78843009 Msa1079610:CDS
ACCAACGACCTGTGAGAAGT+TGG 0.577172 7_2:-78842148 None:intergenic
AAGAATTTCCCTAATAGTCG+TGG 0.586229 7_2:+78842530 Msa1079610:CDS
AGGATTGAGTGTATTGGTGA+TGG 0.586917 7_2:+78842848 Msa1079610:CDS
GGAGCTGTGGCAAGTCCTGT+GGG 0.587082 7_2:+78843553 Msa1079610:CDS
TTCACATACCAACTTCTCAC+AGG 0.591142 7_2:+78842140 Msa1079610:CDS
ACCAACTTCTCACAGGTCGT+TGG 0.591906 7_2:+78842147 Msa1079610:CDS
CATATGGAACTATCTAGGAC+GGG 0.596098 7_2:+78843288 Msa1079610:CDS
CACCACATTAGGCGTTGCCG+AGG 0.596232 7_2:+78843897 Msa1079610:CDS
TTACATATTCAATGTGAGAG+TGG 0.596665 7_2:+78843579 Msa1079610:CDS
TGTGATGACATGTTCTGAAG+TGG 0.599412 7_2:-78842995 None:intergenic
ACCATTGGTGGTGTGCTCTG+TGG 0.600584 7_2:-78842087 None:intergenic
GCATATGGAACTATCTAGGA+CGG 0.605084 7_2:+78843287 Msa1079610:CDS
AACCTCGGCAACGCCTAATG+TGG 0.613118 7_2:-78843899 None:intergenic
ACTATTGAGGACACCATTGG+TGG 0.614443 7_2:-78842099 None:intergenic
AAAGTGAGCAGATACGGACG+AGG 0.617413 7_2:-78843358 None:intergenic
TATATATGAAAAGTATAGGG+AGG 0.617418 7_2:+78843798 Msa1079610:CDS
TTGAATATGTAAGATCCCAC+AGG 0.630754 7_2:-78843568 None:intergenic
GGTCTTTGAAGAAACTAAGG+AGG 0.631093 7_2:-78842283 None:intergenic
ACATGTTCTGAAGTGGAACT+GGG 0.631817 7_2:-78842988 None:intergenic
ACACTGACATGTCCTTACCC+TGG 0.636405 7_2:-78843934 None:intergenic
GCCACAGAGCACACCACCAA+TGG 0.637209 7_2:+78842086 Msa1079610:CDS
AGGTTACTCGTAGTCTTCCA+GGG 0.641519 7_2:+78843917 Msa1079610:CDS
AAAGACCTCGGCGCCAACGT+CGG 0.647885 7_2:+78842299 Msa1079610:CDS
TGTGAGAAGTTGGTATGTGA+AGG 0.651582 7_2:-78842138 None:intergenic
TAACACCGACGTTGGCGCCG+AGG 0.651794 7_2:-78842304 None:intergenic
TGGAAGACTACGAGTAACCT+CGG 0.660983 7_2:-78843914 None:intergenic
ACCGGAGATAACACCGACGT+TGG 0.667717 7_2:-78842312 None:intergenic
CCGGTTAAGAGAACAACCCA+AGG 0.693962 7_2:-78842356 None:intergenic
ACTTAGAAGACAAAAGGGGA+AGG 0.694205 7_2:+78843651 Msa1079610:CDS
AGGGACTTAGAAGACAAAAG+GGG 0.733376 7_2:+78843647 Msa1079610:CDS
GTTAAGAGAACAACCCAAGG+TGG 0.750485 7_2:-78842353 None:intergenic
AAGTGAGCAGATACGGACGA+GGG 0.776273 7_2:-78843357 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATCATAGTTTATATTA+TGG + chr7_2:78842611-78842630 Msa1079610:CDS 10.0%
!! ATTTATCATAGTTTATATTA+TGG + chr7_2:78842611-78842630 Msa1079610:CDS 10.0%
!!! TGTATGAATTTTTTTAGTTA+CGG - chr7_2:78842423-78842442 None:intergenic 15.0%
!! AATTTCAAAATTCTAATAGT+TGG - chr7_2:78842710-78842729 None:intergenic 15.0%
!!! ATGTTTTGTTTCTTTTATTT+TGG + chr7_2:78843744-78843763 Msa1079610:CDS 15.0%
!!! TGTATGAATTTTTTTAGTTA+CGG - chr7_2:78842423-78842442 None:intergenic 15.0%
!! AATTTCAAAATTCTAATAGT+TGG - chr7_2:78842710-78842729 None:intergenic 15.0%
!!! ATGTTTTGTTTCTTTTATTT+TGG + chr7_2:78843744-78843763 Msa1079610:CDS 15.0%
!! AATCTTCTTTATATTTCACT+TGG + chr7_2:78842770-78842789 Msa1079610:CDS 20.0%
!!! AAGTTGTAGTACTTTTATTT+GGG - chr7_2:78843252-78843271 None:intergenic 20.0%
!!! AAAGTTGTAGTACTTTTATT+TGG - chr7_2:78843253-78843272 None:intergenic 20.0%
!! GTATTTCAATCCAAAAATTT+CGG - chr7_2:78843512-78843531 None:intergenic 20.0%
!!! TATTCAACTTTGTACAATTT+TGG + chr7_2:78843532-78843551 Msa1079610:CDS 20.0%
!!! GGATATATATGAAAAGTATA+GGG + chr7_2:78843795-78843814 Msa1079610:CDS 20.0%
!! AATCTTCTTTATATTTCACT+TGG + chr7_2:78842770-78842789 Msa1079610:CDS 20.0%
!!! AAGTTGTAGTACTTTTATTT+GGG - chr7_2:78843252-78843271 None:intergenic 20.0%
!!! AAAGTTGTAGTACTTTTATT+TGG - chr7_2:78843253-78843272 None:intergenic 20.0%
!! GTATTTCAATCCAAAAATTT+CGG - chr7_2:78843512-78843531 None:intergenic 20.0%
!!! TATTCAACTTTGTACAATTT+TGG + chr7_2:78843532-78843551 Msa1079610:CDS 20.0%
!!! GGATATATATGAAAAGTATA+GGG + chr7_2:78843795-78843814 Msa1079610:CDS 20.0%
!! AGGATAAAGAGGTTTTTATT+TGG - chr7_2:78842244-78842263 None:intergenic 25.0%
!! TGTGATTTCATTGATTAAAC+CGG - chr7_2:78842333-78842352 None:intergenic 25.0%
! AAATTCATACACCTAAAGTT+TGG + chr7_2:78842432-78842451 Msa1079610:CDS 25.0%
! ATGTGTCTTTATATTTGCAT+TGG + chr7_2:78842458-78842477 Msa1079610:CDS 25.0%
!!! AGTGTTTTAGGTCTTTTAAA+AGG + chr7_2:78842554-78842573 Msa1079610:CDS 25.0%
!!! CTCTTATTTTACTTATTGCT+TGG + chr7_2:78842654-78842673 Msa1079610:CDS 25.0%
!! TTGAGAAAGTTAACATGTTT+TGG - chr7_2:78842829-78842848 None:intergenic 25.0%
! AAAACATGTTAACTTTCTCA+AGG + chr7_2:78842828-78842847 Msa1079610:CDS 25.0%
!! ATATTGAAGTATCCTTCAAT+AGG - chr7_2:78842943-78842962 None:intergenic 25.0%
! GTATTTGGTTAACAAAATCT+CGG - chr7_2:78843332-78843351 None:intergenic 25.0%
!!! GTGATTATTGGTTTTTGTTT+TGG + chr7_2:78843454-78843473 Msa1079610:CDS 25.0%
! ATTACAGCATCAACTTTAAT+TGG + chr7_2:78843721-78843740 Msa1079610:CDS 25.0%
!!! TTTCTTTTATTTTGGTGCTT+AGG + chr7_2:78843752-78843771 Msa1079610:CDS 25.0%
!! GGGATATATATGAAAAGTAT+AGG + chr7_2:78843794-78843813 Msa1079610:CDS 25.0%
!! TATATATGAAAAGTATAGGG+AGG + chr7_2:78843798-78843817 Msa1079610:CDS 25.0%
! CAAATGAAGATTGTGAAAAA+TGG + chr7_2:78843841-78843860 Msa1079610:CDS 25.0%
!! AGGATAAAGAGGTTTTTATT+TGG - chr7_2:78842244-78842263 None:intergenic 25.0%
!! TGTGATTTCATTGATTAAAC+CGG - chr7_2:78842333-78842352 None:intergenic 25.0%
! AAATTCATACACCTAAAGTT+TGG + chr7_2:78842432-78842451 Msa1079610:CDS 25.0%
! ATGTGTCTTTATATTTGCAT+TGG + chr7_2:78842458-78842477 Msa1079610:CDS 25.0%
!!! AGTGTTTTAGGTCTTTTAAA+AGG + chr7_2:78842554-78842573 Msa1079610:CDS 25.0%
!!! CTCTTATTTTACTTATTGCT+TGG + chr7_2:78842654-78842673 Msa1079610:CDS 25.0%
!! TTGAGAAAGTTAACATGTTT+TGG - chr7_2:78842829-78842848 None:intergenic 25.0%
! AAAACATGTTAACTTTCTCA+AGG + chr7_2:78842828-78842847 Msa1079610:CDS 25.0%
!! ATATTGAAGTATCCTTCAAT+AGG - chr7_2:78842943-78842962 None:intergenic 25.0%
! GTATTTGGTTAACAAAATCT+CGG - chr7_2:78843332-78843351 None:intergenic 25.0%
!!! GTGATTATTGGTTTTTGTTT+TGG + chr7_2:78843454-78843473 Msa1079610:CDS 25.0%
! ATTACAGCATCAACTTTAAT+TGG + chr7_2:78843721-78843740 Msa1079610:CDS 25.0%
!!! TTTCTTTTATTTTGGTGCTT+AGG + chr7_2:78843752-78843771 Msa1079610:CDS 25.0%
!! GGGATATATATGAAAAGTAT+AGG + chr7_2:78843794-78843813 Msa1079610:CDS 25.0%
!! TATATATGAAAAGTATAGGG+AGG + chr7_2:78843798-78843817 Msa1079610:CDS 25.0%
! CAAATGAAGATTGTGAAAAA+TGG + chr7_2:78843841-78843860 Msa1079610:CDS 25.0%
GAAAAAATTCATGATGGTAC+CGG - chr7_2:78842378-78842397 None:intergenic 30.0%
!!! GGTACCATCATGAATTTTTT+CGG + chr7_2:78842377-78842396 Msa1079610:CDS 30.0%
GTAACCGAAAAAATTCATGA+TGG - chr7_2:78842384-78842403 None:intergenic 30.0%
! TTTTCGGTTACTTCATGATA+TGG + chr7_2:78842393-78842412 Msa1079610:CDS 30.0%
! TCTCAAACTTTTACTAACAC+AGG + chr7_2:78842488-78842507 Msa1079610:CDS 30.0%
!! GGTCTTTTAAAAGGTTATGT+TGG + chr7_2:78842563-78842582 Msa1079610:CDS 30.0%
!! AAAGGTTATGTTGGTTTAAG+TGG + chr7_2:78842572-78842591 Msa1079610:CDS 30.0%
GAACAACATACAACAACAAA+AGG + chr7_2:78842730-78842749 Msa1079610:CDS 30.0%
CAAATTCAACAACCTATTGA+AGG + chr7_2:78842928-78842947 Msa1079610:CDS 30.0%
ATATTCAAACCTCCTAATAG+AGG + chr7_2:78843094-78843113 Msa1079610:CDS 30.0%
ATTAACAGCGATCGATAATT+TGG + chr7_2:78843201-78843220 Msa1079610:CDS 30.0%
TTAACAGCGATCGATAATTT+GGG + chr7_2:78843202-78843221 Msa1079610:CDS 30.0%
! ATCGATAATTTGGGACAAAT+TGG + chr7_2:78843211-78843230 Msa1079610:CDS 30.0%
GACAAATTGGTCATTCATTA+GGG + chr7_2:78843224-78843243 Msa1079610:CDS 30.0%
GATATGATTGCAAACATCAA+TGG - chr7_2:78843490-78843509 None:intergenic 30.0%
! GCAATCATATCCGAAATTTT+TGG + chr7_2:78843499-78843518 Msa1079610:CDS 30.0%
TTACATATTCAATGTGAGAG+TGG + chr7_2:78843579-78843598 Msa1079610:CDS 30.0%
!! AGAAGCTTTGAAACAATTAG+AGG + chr7_2:78843621-78843640 Msa1079610:CDS 30.0%
! TTTGAAACAATTAGAGGCTA+AGG + chr7_2:78843627-78843646 Msa1079610:CDS 30.0%
TTGAAACAATTAGAGGCTAA+GGG + chr7_2:78843628-78843647 Msa1079610:CDS 30.0%
! AGGACCAGAAAATTTTACAA+AGG + chr7_2:78843772-78843791 Msa1079610:CDS 30.0%
! GGACCAGAAAATTTTACAAA+GGG + chr7_2:78843773-78843792 Msa1079610:CDS 30.0%
! GACCAGAAAATTTTACAAAG+GGG + chr7_2:78843774-78843793 Msa1079610:CDS 30.0%
! ATCCCCTTTGTAAAATTTTC+TGG - chr7_2:78843779-78843798 None:intergenic 30.0%
AAGATTGTGAAAAATGGTGA+TGG + chr7_2:78843847-78843866 Msa1079610:CDS 30.0%
GAAAAAATTCATGATGGTAC+CGG - chr7_2:78842378-78842397 None:intergenic 30.0%
!!! GGTACCATCATGAATTTTTT+CGG + chr7_2:78842377-78842396 Msa1079610:CDS 30.0%
GTAACCGAAAAAATTCATGA+TGG - chr7_2:78842384-78842403 None:intergenic 30.0%
! TTTTCGGTTACTTCATGATA+TGG + chr7_2:78842393-78842412 Msa1079610:CDS 30.0%
! TCTCAAACTTTTACTAACAC+AGG + chr7_2:78842488-78842507 Msa1079610:CDS 30.0%
!! GGTCTTTTAAAAGGTTATGT+TGG + chr7_2:78842563-78842582 Msa1079610:CDS 30.0%
!! AAAGGTTATGTTGGTTTAAG+TGG + chr7_2:78842572-78842591 Msa1079610:CDS 30.0%
GAACAACATACAACAACAAA+AGG + chr7_2:78842730-78842749 Msa1079610:CDS 30.0%
CAAATTCAACAACCTATTGA+AGG + chr7_2:78842928-78842947 Msa1079610:CDS 30.0%
ATATTCAAACCTCCTAATAG+AGG + chr7_2:78843094-78843113 Msa1079610:CDS 30.0%
ATTAACAGCGATCGATAATT+TGG + chr7_2:78843201-78843220 Msa1079610:CDS 30.0%
TTAACAGCGATCGATAATTT+GGG + chr7_2:78843202-78843221 Msa1079610:CDS 30.0%
! ATCGATAATTTGGGACAAAT+TGG + chr7_2:78843211-78843230 Msa1079610:CDS 30.0%
GACAAATTGGTCATTCATTA+GGG + chr7_2:78843224-78843243 Msa1079610:CDS 30.0%
GATATGATTGCAAACATCAA+TGG - chr7_2:78843490-78843509 None:intergenic 30.0%
! GCAATCATATCCGAAATTTT+TGG + chr7_2:78843499-78843518 Msa1079610:CDS 30.0%
TTACATATTCAATGTGAGAG+TGG + chr7_2:78843579-78843598 Msa1079610:CDS 30.0%
!! AGAAGCTTTGAAACAATTAG+AGG + chr7_2:78843621-78843640 Msa1079610:CDS 30.0%
! TTTGAAACAATTAGAGGCTA+AGG + chr7_2:78843627-78843646 Msa1079610:CDS 30.0%
TTGAAACAATTAGAGGCTAA+GGG + chr7_2:78843628-78843647 Msa1079610:CDS 30.0%
! AGGACCAGAAAATTTTACAA+AGG + chr7_2:78843772-78843791 Msa1079610:CDS 30.0%
! GGACCAGAAAATTTTACAAA+GGG + chr7_2:78843773-78843792 Msa1079610:CDS 30.0%
! GACCAGAAAATTTTACAAAG+GGG + chr7_2:78843774-78843793 Msa1079610:CDS 30.0%
! ATCCCCTTTGTAAAATTTTC+TGG - chr7_2:78843779-78843798 None:intergenic 30.0%
AAGATTGTGAAAAATGGTGA+TGG + chr7_2:78843847-78843866 Msa1079610:CDS 30.0%
TTGTTCCTTTCCAACTATTG+AGG - chr7_2:78842115-78842134 None:intergenic 35.0%
TGTTTGGTCATAGGATAAAG+AGG - chr7_2:78842255-78842274 None:intergenic 35.0%
! GTTTAGAGTTGTTTGGTCAT+AGG - chr7_2:78842264-78842283 None:intergenic 35.0%
! TAAGGAGGTTTAGAGTTGTT+TGG - chr7_2:78842271-78842290 None:intergenic 35.0%
CTTAGTTTCTTCAAAGACCT+CGG + chr7_2:78842287-78842306 Msa1079610:CDS 35.0%
AGACACATTTGCCAAACTTT+AGG - chr7_2:78842446-78842465 None:intergenic 35.0%
! TTTTACTAACACAGGTGCTT+TGG + chr7_2:78842496-78842515 Msa1079610:CDS 35.0%
AAGAATTTCCCTAATAGTCG+TGG + chr7_2:78842530-78842549 Msa1079610:CDS 35.0%
AAACACTACCACGACTATTA+GGG - chr7_2:78842541-78842560 None:intergenic 35.0%
AAAACACTACCACGACTATT+AGG - chr7_2:78842542-78842561 None:intergenic 35.0%
!! AATAGTCGTGGTAGTGTTTT+AGG + chr7_2:78842542-78842561 Msa1079610:CDS 35.0%
AAAAGAAAAGAAACAGCAGC+AGG - chr7_2:78842683-78842702 None:intergenic 35.0%
!! TATATTTCACTTGGTCTTGC+TGG + chr7_2:78842779-78842798 Msa1079610:CDS 35.0%
TTCTCAAGGATTGAGTGTAT+TGG + chr7_2:78842842-78842861 Msa1079610:CDS 35.0%
TCTCTAAATACCACAACAAG+TGG - chr7_2:78842902-78842921 None:intergenic 35.0%
ACAAGAAAAGCAGTTCTTGT+TGG + chr7_2:78843065-78843084 Msa1079610:CDS 35.0%
! CTTTTCCTAGCAACAACTTT+TGG + chr7_2:78843166-78843185 Msa1079610:CDS 35.0%
GGACAAATTGGTCATTCATT+AGG + chr7_2:78843223-78843242 Msa1079610:CDS 35.0%
ATGACAAAAGTGAGCAGATA+CGG - chr7_2:78843367-78843386 None:intergenic 35.0%
TACTTTGCGTCAGTGATTAT+TGG + chr7_2:78843442-78843461 Msa1079610:CDS 35.0%
!!! GTTTTTGTTTTGGAGCTCAA+TGG + chr7_2:78843464-78843483 Msa1079610:CDS 35.0%
!!! TTTGTACAATTTTGGAGCTG+TGG + chr7_2:78843540-78843559 Msa1079610:CDS 35.0%
TTGAATATGTAAGATCCCAC+AGG - chr7_2:78843571-78843590 None:intergenic 35.0%
TAAGGGACTTAGAAGACAAA+AGG + chr7_2:78843645-78843664 Msa1079610:CDS 35.0%
AAGGGACTTAGAAGACAAAA+GGG + chr7_2:78843646-78843665 Msa1079610:CDS 35.0%
! TGGAGTAGAGTGTTATAGAA+TGG + chr7_2:78843687-78843706 Msa1079610:CDS 35.0%
TTGTTCCTTTCCAACTATTG+AGG - chr7_2:78842115-78842134 None:intergenic 35.0%
TGTTTGGTCATAGGATAAAG+AGG - chr7_2:78842255-78842274 None:intergenic 35.0%
! GTTTAGAGTTGTTTGGTCAT+AGG - chr7_2:78842264-78842283 None:intergenic 35.0%
! TAAGGAGGTTTAGAGTTGTT+TGG - chr7_2:78842271-78842290 None:intergenic 35.0%
CTTAGTTTCTTCAAAGACCT+CGG + chr7_2:78842287-78842306 Msa1079610:CDS 35.0%
AGACACATTTGCCAAACTTT+AGG - chr7_2:78842446-78842465 None:intergenic 35.0%
! TTTTACTAACACAGGTGCTT+TGG + chr7_2:78842496-78842515 Msa1079610:CDS 35.0%
AAGAATTTCCCTAATAGTCG+TGG + chr7_2:78842530-78842549 Msa1079610:CDS 35.0%
AAACACTACCACGACTATTA+GGG - chr7_2:78842541-78842560 None:intergenic 35.0%
AAAACACTACCACGACTATT+AGG - chr7_2:78842542-78842561 None:intergenic 35.0%
!! AATAGTCGTGGTAGTGTTTT+AGG + chr7_2:78842542-78842561 Msa1079610:CDS 35.0%
AAAAGAAAAGAAACAGCAGC+AGG - chr7_2:78842683-78842702 None:intergenic 35.0%
!! TATATTTCACTTGGTCTTGC+TGG + chr7_2:78842779-78842798 Msa1079610:CDS 35.0%
TTCTCAAGGATTGAGTGTAT+TGG + chr7_2:78842842-78842861 Msa1079610:CDS 35.0%
TCTCTAAATACCACAACAAG+TGG - chr7_2:78842902-78842921 None:intergenic 35.0%
ACAAGAAAAGCAGTTCTTGT+TGG + chr7_2:78843065-78843084 Msa1079610:CDS 35.0%
! CTTTTCCTAGCAACAACTTT+TGG + chr7_2:78843166-78843185 Msa1079610:CDS 35.0%
GGACAAATTGGTCATTCATT+AGG + chr7_2:78843223-78843242 Msa1079610:CDS 35.0%
ATGACAAAAGTGAGCAGATA+CGG - chr7_2:78843367-78843386 None:intergenic 35.0%
TACTTTGCGTCAGTGATTAT+TGG + chr7_2:78843442-78843461 Msa1079610:CDS 35.0%
!!! GTTTTTGTTTTGGAGCTCAA+TGG + chr7_2:78843464-78843483 Msa1079610:CDS 35.0%
!!! TTTGTACAATTTTGGAGCTG+TGG + chr7_2:78843540-78843559 Msa1079610:CDS 35.0%
TTGAATATGTAAGATCCCAC+AGG - chr7_2:78843571-78843590 None:intergenic 35.0%
TAAGGGACTTAGAAGACAAA+AGG + chr7_2:78843645-78843664 Msa1079610:CDS 35.0%
AAGGGACTTAGAAGACAAAA+GGG + chr7_2:78843646-78843665 Msa1079610:CDS 35.0%
! TGGAGTAGAGTGTTATAGAA+TGG + chr7_2:78843687-78843706 Msa1079610:CDS 35.0%
!! TGTGAGAAGTTGGTATGTGA+AGG - chr7_2:78842141-78842160 None:intergenic 40.0%
TTCACATACCAACTTCTCAC+AGG + chr7_2:78842140-78842159 Msa1079610:CDS 40.0%
! GGTCTTTGAAGAAACTAAGG+AGG - chr7_2:78842286-78842305 None:intergenic 40.0%
! CGAGGTCTTTGAAGAAACTA+AGG - chr7_2:78842289-78842308 None:intergenic 40.0%
TCAATGAAATCACACCACCT+TGG + chr7_2:78842339-78842358 Msa1079610:CDS 40.0%
CAATGAAATCACACCACCTT+GGG + chr7_2:78842340-78842359 Msa1079610:CDS 40.0%
! AGGATTGAGTGTATTGGTGA+TGG + chr7_2:78842848-78842867 Msa1079610:CDS 40.0%
! TCTACTTCTTCCACTTGTTG+TGG + chr7_2:78842889-78842908 Msa1079610:CDS 40.0%
!! ACATGTTCTGAAGTGGAACT+GGG - chr7_2:78842991-78843010 None:intergenic 40.0%
!! TGTGATGACATGTTCTGAAG+TGG - chr7_2:78842998-78843017 None:intergenic 40.0%
AGAAAAGCAGTTCTTGTTGG+AGG + chr7_2:78843068-78843087 Msa1079610:CDS 40.0%
TAGTCTTCACCTCTATTAGG+AGG - chr7_2:78843106-78843125 None:intergenic 40.0%
GTGTAGTCTTCACCTCTATT+AGG - chr7_2:78843109-78843128 None:intergenic 40.0%
CAACACCAAAAGTTGTTGCT+AGG - chr7_2:78843174-78843193 None:intergenic 40.0%
!! CTAGCAACAACTTTTGGTGT+TGG + chr7_2:78843172-78843191 Msa1079610:CDS 40.0%
! TACTACAACTTTTGTGTCGC+TGG + chr7_2:78843261-78843280 Msa1079610:CDS 40.0%
GTGAGCATATGGAACTATCT+AGG + chr7_2:78843283-78843302 Msa1079610:CDS 40.0%
GCATATGGAACTATCTAGGA+CGG + chr7_2:78843287-78843306 Msa1079610:CDS 40.0%
! CATATGGAACTATCTAGGAC+GGG + chr7_2:78843288-78843307 Msa1079610:CDS 40.0%
ATATTCAATGTGAGAGTGGC+TGG + chr7_2:78843583-78843602 Msa1079610:CDS 40.0%
AGGGACTTAGAAGACAAAAG+GGG + chr7_2:78843647-78843666 Msa1079610:CDS 40.0%
ACTTAGAAGACAAAAGGGGA+AGG + chr7_2:78843651-78843670 Msa1079610:CDS 40.0%
!! TGTGAGAAGTTGGTATGTGA+AGG - chr7_2:78842141-78842160 None:intergenic 40.0%
TTCACATACCAACTTCTCAC+AGG + chr7_2:78842140-78842159 Msa1079610:CDS 40.0%
! GGTCTTTGAAGAAACTAAGG+AGG - chr7_2:78842286-78842305 None:intergenic 40.0%
! CGAGGTCTTTGAAGAAACTA+AGG - chr7_2:78842289-78842308 None:intergenic 40.0%
TCAATGAAATCACACCACCT+TGG + chr7_2:78842339-78842358 Msa1079610:CDS 40.0%
CAATGAAATCACACCACCTT+GGG + chr7_2:78842340-78842359 Msa1079610:CDS 40.0%
! AGGATTGAGTGTATTGGTGA+TGG + chr7_2:78842848-78842867 Msa1079610:CDS 40.0%
! TCTACTTCTTCCACTTGTTG+TGG + chr7_2:78842889-78842908 Msa1079610:CDS 40.0%
!! ACATGTTCTGAAGTGGAACT+GGG - chr7_2:78842991-78843010 None:intergenic 40.0%
!! TGTGATGACATGTTCTGAAG+TGG - chr7_2:78842998-78843017 None:intergenic 40.0%
AGAAAAGCAGTTCTTGTTGG+AGG + chr7_2:78843068-78843087 Msa1079610:CDS 40.0%
TAGTCTTCACCTCTATTAGG+AGG - chr7_2:78843106-78843125 None:intergenic 40.0%
GTGTAGTCTTCACCTCTATT+AGG - chr7_2:78843109-78843128 None:intergenic 40.0%
CAACACCAAAAGTTGTTGCT+AGG - chr7_2:78843174-78843193 None:intergenic 40.0%
!! CTAGCAACAACTTTTGGTGT+TGG + chr7_2:78843172-78843191 Msa1079610:CDS 40.0%
! TACTACAACTTTTGTGTCGC+TGG + chr7_2:78843261-78843280 Msa1079610:CDS 40.0%
GTGAGCATATGGAACTATCT+AGG + chr7_2:78843283-78843302 Msa1079610:CDS 40.0%
GCATATGGAACTATCTAGGA+CGG + chr7_2:78843287-78843306 Msa1079610:CDS 40.0%
! CATATGGAACTATCTAGGAC+GGG + chr7_2:78843288-78843307 Msa1079610:CDS 40.0%
ATATTCAATGTGAGAGTGGC+TGG + chr7_2:78843583-78843602 Msa1079610:CDS 40.0%
AGGGACTTAGAAGACAAAAG+GGG + chr7_2:78843647-78843666 Msa1079610:CDS 40.0%
ACTTAGAAGACAAAAGGGGA+AGG + chr7_2:78843651-78843670 Msa1079610:CDS 40.0%
ACTATTGAGGACACCATTGG+TGG - chr7_2:78842102-78842121 None:intergenic 45.0%
CCAACTATTGAGGACACCAT+TGG - chr7_2:78842105-78842124 None:intergenic 45.0%
CCAATGGTGTCCTCAATAGT+TGG + chr7_2:78842102-78842121 Msa1079610:CDS 45.0%
GGTGTCCTCAATAGTTGGAA+AGG + chr7_2:78842107-78842126 Msa1079610:CDS 45.0%
TCACTAATCATGTCCGTAGC+AGG + chr7_2:78842188-78842207 Msa1079610:CDS 45.0%
CATGTATGTTGCACCTGCTA+CGG - chr7_2:78842204-78842223 None:intergenic 45.0%
GCAGGTGCAACATACATGTT+TGG + chr7_2:78842206-78842225 Msa1079610:CDS 45.0%
GTTAAGAGAACAACCCAAGG+TGG - chr7_2:78842356-78842375 None:intergenic 45.0%
! CCTTGGGTTGTTCTCTTAAC+CGG + chr7_2:78842356-78842375 Msa1079610:CDS 45.0%
!!! TGGTCTTGCTGGTTTTCTCA+TGG + chr7_2:78842790-78842809 Msa1079610:CDS 45.0%
!! GACATGTTCTGAAGTGGAAC+TGG - chr7_2:78842992-78843011 None:intergenic 45.0%
GTCATCACACGAACAAGAAG+CGG + chr7_2:78843009-78843028 Msa1079610:CDS 45.0%
!!! GCAACAACTTTTGGTGTTGG+TGG + chr7_2:78843175-78843194 Msa1079610:CDS 45.0%
! CGGACGAGGGATTTTGTATT+TGG - chr7_2:78843347-78843366 None:intergenic 45.0%
GTCATGCTTCTCTCTTGTGT+TGG + chr7_2:78843382-78843401 Msa1079610:CDS 45.0%
TGGAAGACTACGAGTAACCT+CGG - chr7_2:78843917-78843936 None:intergenic 45.0%
AGGTTACTCGTAGTCTTCCA+GGG + chr7_2:78843917-78843936 Msa1079610:CDS 45.0%
ACTATTGAGGACACCATTGG+TGG - chr7_2:78842102-78842121 None:intergenic 45.0%
CCAACTATTGAGGACACCAT+TGG - chr7_2:78842105-78842124 None:intergenic 45.0%
CCAATGGTGTCCTCAATAGT+TGG + chr7_2:78842102-78842121 Msa1079610:CDS 45.0%
GGTGTCCTCAATAGTTGGAA+AGG + chr7_2:78842107-78842126 Msa1079610:CDS 45.0%
TCACTAATCATGTCCGTAGC+AGG + chr7_2:78842188-78842207 Msa1079610:CDS 45.0%
CATGTATGTTGCACCTGCTA+CGG - chr7_2:78842204-78842223 None:intergenic 45.0%
GCAGGTGCAACATACATGTT+TGG + chr7_2:78842206-78842225 Msa1079610:CDS 45.0%
GTTAAGAGAACAACCCAAGG+TGG - chr7_2:78842356-78842375 None:intergenic 45.0%
! CCTTGGGTTGTTCTCTTAAC+CGG + chr7_2:78842356-78842375 Msa1079610:CDS 45.0%
!!! TGGTCTTGCTGGTTTTCTCA+TGG + chr7_2:78842790-78842809 Msa1079610:CDS 45.0%
!! GACATGTTCTGAAGTGGAAC+TGG - chr7_2:78842992-78843011 None:intergenic 45.0%
GTCATCACACGAACAAGAAG+CGG + chr7_2:78843009-78843028 Msa1079610:CDS 45.0%
!!! GCAACAACTTTTGGTGTTGG+TGG + chr7_2:78843175-78843194 Msa1079610:CDS 45.0%
! CGGACGAGGGATTTTGTATT+TGG - chr7_2:78843347-78843366 None:intergenic 45.0%
GTCATGCTTCTCTCTTGTGT+TGG + chr7_2:78843382-78843401 Msa1079610:CDS 45.0%
TGGAAGACTACGAGTAACCT+CGG - chr7_2:78843917-78843936 None:intergenic 45.0%
AGGTTACTCGTAGTCTTCCA+GGG + chr7_2:78843917-78843936 Msa1079610:CDS 45.0%
ACCAACTTCTCACAGGTCGT+TGG + chr7_2:78842147-78842166 Msa1079610:CDS 50.0%
ACCAACGACCTGTGAGAAGT+TGG - chr7_2:78842151-78842170 None:intergenic 50.0%
CCGGTTAAGAGAACAACCCA+AGG - chr7_2:78842359-78842378 None:intergenic 50.0%
! TTGTGTCGCTGGTGAGCATA+TGG + chr7_2:78843272-78843291 Msa1079610:CDS 50.0%
!! CTATCTAGGACGGGTTGCAT+CGG + chr7_2:78843297-78843316 Msa1079610:CDS 50.0%
!! TATCTAGGACGGGTTGCATC+GGG + chr7_2:78843298-78843317 Msa1079610:CDS 50.0%
AAGTGAGCAGATACGGACGA+GGG - chr7_2:78843360-78843379 None:intergenic 50.0%
AAAGTGAGCAGATACGGACG+AGG - chr7_2:78843361-78843380 None:intergenic 50.0%
GGTCACATTCTAATCGCGCT+AGG + chr7_2:78843403-78843422 Msa1079610:CDS 50.0%
!! GGGAAGGACTTGACTTGTGT+TGG + chr7_2:78843667-78843686 Msa1079610:CDS 50.0%
GACCACGACAACACCACATT+AGG + chr7_2:78843886-78843905 Msa1079610:CDS 50.0%
GAGGTTACTCGTAGTCTTCC+AGG + chr7_2:78843916-78843935 Msa1079610:CDS 50.0%
ACCAACTTCTCACAGGTCGT+TGG + chr7_2:78842147-78842166 Msa1079610:CDS 50.0%
ACCAACGACCTGTGAGAAGT+TGG - chr7_2:78842151-78842170 None:intergenic 50.0%
CCGGTTAAGAGAACAACCCA+AGG - chr7_2:78842359-78842378 None:intergenic 50.0%
! TTGTGTCGCTGGTGAGCATA+TGG + chr7_2:78843272-78843291 Msa1079610:CDS 50.0%
!! CTATCTAGGACGGGTTGCAT+CGG + chr7_2:78843297-78843316 Msa1079610:CDS 50.0%
!! TATCTAGGACGGGTTGCATC+GGG + chr7_2:78843298-78843317 Msa1079610:CDS 50.0%
AAGTGAGCAGATACGGACGA+GGG - chr7_2:78843360-78843379 None:intergenic 50.0%
AAAGTGAGCAGATACGGACG+AGG - chr7_2:78843361-78843380 None:intergenic 50.0%
GGTCACATTCTAATCGCGCT+AGG + chr7_2:78843403-78843422 Msa1079610:CDS 50.0%
!! GGGAAGGACTTGACTTGTGT+TGG + chr7_2:78843667-78843686 Msa1079610:CDS 50.0%
GACCACGACAACACCACATT+AGG + chr7_2:78843886-78843905 Msa1079610:CDS 50.0%
GAGGTTACTCGTAGTCTTCC+AGG + chr7_2:78843916-78843935 Msa1079610:CDS 50.0%
!! ACCATTGGTGGTGTGCTCTG+TGG - chr7_2:78842090-78842109 None:intergenic 55.0%
!! GCCAACGTCGGTGTTATCTC+CGG + chr7_2:78842311-78842330 Msa1079610:CDS 55.0%
ACCGGAGATAACACCGACGT+TGG - chr7_2:78842315-78842334 None:intergenic 55.0%
!! CGCCTAATGTGGTGTTGTCG+TGG - chr7_2:78843891-78843910 None:intergenic 55.0%
AACCTCGGCAACGCCTAATG+TGG - chr7_2:78843902-78843921 None:intergenic 55.0%
!! ACCATTGGTGGTGTGCTCTG+TGG - chr7_2:78842090-78842109 None:intergenic 55.0%
!! GCCAACGTCGGTGTTATCTC+CGG + chr7_2:78842311-78842330 Msa1079610:CDS 55.0%
ACCGGAGATAACACCGACGT+TGG - chr7_2:78842315-78842334 None:intergenic 55.0%
!! CGCCTAATGTGGTGTTGTCG+TGG - chr7_2:78843891-78843910 None:intergenic 55.0%
AACCTCGGCAACGCCTAATG+TGG - chr7_2:78843902-78843921 None:intergenic 55.0%
GCCACAGAGCACACCACCAA+TGG + chr7_2:78842086-78842105 Msa1079610:CDS 60.0%
AAAGACCTCGGCGCCAACGT+CGG + chr7_2:78842299-78842318 Msa1079610:CDS 60.0%
TGGAGCTGTGGCAAGTCCTG+TGG + chr7_2:78843552-78843571 Msa1079610:CDS 60.0%
GGAGCTGTGGCAAGTCCTGT+GGG + chr7_2:78843553-78843572 Msa1079610:CDS 60.0%
! CACCACATTAGGCGTTGCCG+AGG + chr7_2:78843897-78843916 Msa1079610:CDS 60.0%
GCCACAGAGCACACCACCAA+TGG + chr7_2:78842086-78842105 Msa1079610:CDS 60.0%
AAAGACCTCGGCGCCAACGT+CGG + chr7_2:78842299-78842318 Msa1079610:CDS 60.0%
TGGAGCTGTGGCAAGTCCTG+TGG + chr7_2:78843552-78843571 Msa1079610:CDS 60.0%
GGAGCTGTGGCAAGTCCTGT+GGG + chr7_2:78843553-78843572 Msa1079610:CDS 60.0%
! CACCACATTAGGCGTTGCCG+AGG + chr7_2:78843897-78843916 Msa1079610:CDS 60.0%
TAACACCGACGTTGGCGCCG+AGG - chr7_2:78842307-78842326 None:intergenic 65.0%
TAACACCGACGTTGGCGCCG+AGG - chr7_2:78842307-78842326 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 78842080 78843942 78842080 ID=Msa1079610;Name=Msa1079610
chr7_2 mRNA 78842080 78843942 78842080 ID=Msa1079610-mRNA-1;Parent=Msa1079610;Name=Msa1079610-mRNA-1;_AED=0.06;_eAED=0.07;_QI=0|-1|0|1|-1|1|1|0|620
chr7_2 exon 78842080 78843942 78842080 ID=Msa1079610-mRNA-1:exon:19656;Parent=Msa1079610-mRNA-1
chr7_2 CDS 78842080 78843942 78842080 ID=Msa1079610-mRNA-1:cds;Parent=Msa1079610-mRNA-1
Gene Sequence

>Msa1079610

ATGGTAGCCACAGAGCACACCACCAATGGTGTCCTCAATAGTTGGAAAGGAACAAAAACCTTCACATACCAACTTCTCACAGGTCGTTGGTTCATGTTATTTGCATCTTCACTAATCATGTCCGTAGCAGGTGCAACATACATGTTTGGTCTATACTCAAACCAAATAAAAACCTCTTTATCCTATGACCAAACAACTCTAAACCTCCTTAGTTTCTTCAAAGACCTCGGCGCCAACGTCGGTGTTATCTCCGGTTTAATCAATGAAATCACACCACCTTGGGTTGTTCTCTTAACCGGTACCATCATGAATTTTTTCGGTTACTTCATGATATGGCTTTCCGTAACTAAAAAAATTCATACACCTAAAGTTTGGCAAATGTGTCTTTATATTTGCATTGGTGCAAATTCTCAAACTTTTACTAACACAGGTGCTTTGGTTACTTGTGTTAAGAATTTCCCTAATAGTCGTGGTAGTGTTTTAGGTCTTTTAAAAGGTTATGTTGGTTTAAGTGGTGCTATTATTACACAAATTTATCATAGTTTATATTATGGTGATAGTAATAATACTCAATCTCTTATTTTACTTATTGCTTGGCTTCCTGCTGCTGTTTCTTTTCTTTTTCTTCCAACTATTAGAATTTTGAAATTGAACAACATACAACAACAAAAGGAATACAAAGTTTTCTATAATCTTCTTTATATTTCACTTGGTCTTGCTGGTTTTCTCATGGTTTTGATCATAGTCCAAAACATGTTAACTTTCTCAAGGATTGAGTGTATTGGTGATGGACTTTTTGTTATTTTGTTTCTACTTCTTCCACTTGTTGTGGTATTTAGAGAAGAAATCAAATTCAACAACCTATTGAAGGATACTTCAATATCTCAATTGAAAGTAGTCACTGATGTCCCAGTTCCACTTCAGAACATGTCATCACACGAACAAGAAGCGGAAGTGTCATCATCGTCAACAACTACAAATTCAGACAAGAAAAGCAGTTCTTGTTGGAGGACAATATTCAAACCTCCTAATAGAGGTGAAGACTACACAATTTTACAAGCTTTGTTTAGTATTGACATGTTAATTCTTTTCCTAGCAACAACTTTTGGTGTTGGTGGAACATTAACAGCGATCGATAATTTGGGACAAATTGGTCATTCATTAGGGTACCCAAATAAAAGTACTACAACTTTTGTGTCGCTGGTGAGCATATGGAACTATCTAGGACGGGTTGCATCGGGTTATATCTCCGAGATTTTGTTAACCAAATACAAAATCCCTCGTCCGTATCTGCTCACTTTTGTCATGCTTCTCTCTTGTGTTGGTCACATTCTAATCGCGCTAGGTATTTCAAACTCTCTTTACTTTGCGTCAGTGATTATTGGTTTTTGTTTTGGAGCTCAATGGCCATTGATGTTTGCAATCATATCCGAAATTTTTGGATTGAAATACTATTCAACTTTGTACAATTTTGGAGCTGTGGCAAGTCCTGTGGGATCTTACATATTCAATGTGAGAGTGGCTGGTTATTTATATGATAAAGAAGCTTTGAAACAATTAGAGGCTAAGGGACTTAGAAGACAAAAGGGGAAGGACTTGACTTGTGTTGGAGTAGAGTGTTATAGAATGGCTTTTATTATAATTACAGCATCAACTTTAATTGGATGTTTTGTTTCTTTTATTTTGGTGCTTAGGACCAGAAAATTTTACAAAGGGGATATATATGAAAAGTATAGGGAGGAATTTGAAGCAGCAGAGACTCAAATGAAGATTGTGAAAAATGGTGATGGTTTGTCTGAAAGTGAAGACCACGACAACACCACATTAGGCGTTGCCGAGGTTACTCGTAGTCTTCCAGGGTAA

Protein sequence

>Msa1079610

MVATEHTTNGVLNSWKGTKTFTYQLLTGRWFMLFASSLIMSVAGATYMFGLYSNQIKTSLSYDQTTLNLLSFFKDLGANVGVISGLINEITPPWVVLLTGTIMNFFGYFMIWLSVTKKIHTPKVWQMCLYICIGANSQTFTNTGALVTCVKNFPNSRGSVLGLLKGYVGLSGAIITQIYHSLYYGDSNNTQSLILLIAWLPAAVSFLFLPTIRILKLNNIQQQKEYKVFYNLLYISLGLAGFLMVLIIVQNMLTFSRIECIGDGLFVILFLLLPLVVVFREEIKFNNLLKDTSISQLKVVTDVPVPLQNMSSHEQEAEVSSSSTTTNSDKKSSSCWRTIFKPPNRGEDYTILQALFSIDMLILFLATTFGVGGTLTAIDNLGQIGHSLGYPNKSTTTFVSLVSIWNYLGRVASGYISEILLTKYKIPRPYLLTFVMLLSCVGHILIALGISNSLYFASVIIGFCFGAQWPLMFAIISEIFGLKYYSTLYNFGAVASPVGSYIFNVRVAGYLYDKEALKQLEAKGLRRQKGKDLTCVGVECYRMAFIIITASTLIGCFVSFILVLRTRKFYKGDIYEKYREEFEAAETQMKIVKNGDGLSESEDHDNTTLGVAEVTRSLPG*