Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356380 | XP_013459315.1 | 74.026 | 154 | 40 | 0 | 1 | 154 | 1 | 154 | 3.29e-79 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356380 | sp|Q39837|ALB1_SOYBN | 55.263 | 114 | 47 | 2 | 9 | 122 | 1 | 110 | 1.20e-35 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356380 | I3T793 | 74.026 | 154 | 40 | 0 | 1 | 154 | 1 | 154 | 1.57e-79 | 241 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa0356380 | -0.811701 | 6.136303e-51 | -8.615850e-47 |
| Msa0012800 | Msa0356380 | 0.805636 | 1.212990e-49 | -8.615850e-47 |
| Msa0021710 | Msa0356380 | -0.802651 | 5.069424e-49 | -8.615850e-47 |
| Msa0031650 | Msa0356380 | 0.876598 | 1.229016e-68 | -8.615850e-47 |
| Msa0036230 | Msa0356380 | 0.864491 | 1.170072e-64 | -8.615850e-47 |
| Msa0036580 | Msa0356380 | 0.849580 | 2.951408e-60 | -8.615850e-47 |
| Msa0039200 | Msa0356380 | -0.813966 | 1.958908e-51 | -8.615850e-47 |
| Msa0046700 | Msa0356380 | -0.804024 | 2.634993e-49 | -8.615850e-47 |
| Msa0050360 | Msa0356380 | -0.806726 | 7.151656e-50 | -8.615850e-47 |
| Msa0050400 | Msa0356380 | -0.808649 | 2.791863e-50 | -8.615850e-47 |
| Msa0057740 | Msa0356380 | -0.819520 | 1.112277e-52 | -8.615850e-47 |
| Msa0061600 | Msa0356380 | 0.823569 | 1.290426e-53 | -8.615850e-47 |
| Msa0065190 | Msa0356380 | -0.805127 | 1.550842e-49 | -8.615850e-47 |
| Msa0080010 | Msa0356380 | 0.801708 | 7.926371e-49 | -8.615850e-47 |
| Msa0080620 | Msa0356380 | -0.812502 | 4.104867e-51 | -8.615850e-47 |
| Msa0084160 | Msa0356380 | 0.826507 | 2.611666e-54 | -8.615850e-47 |
| Msa0085710 | Msa0356380 | 0.804020 | 2.638933e-49 | -8.615850e-47 |
| Msa0086820 | Msa0356380 | -0.810906 | 9.131596e-51 | -8.615850e-47 |
| Msa0093530 | Msa0356380 | 0.861649 | 8.842650e-64 | -8.615850e-47 |
| Msa0096860 | Msa0356380 | 0.800040 | 1.736683e-48 | -8.615850e-47 |
| Msa0103060 | Msa0356380 | -0.814677 | 1.363742e-51 | -8.615850e-47 |
| Msa0106130 | Msa0356380 | 0.808738 | 2.671659e-50 | -8.615850e-47 |
| Msa0126960 | Msa0356380 | 0.862999 | 3.402281e-64 | -8.615850e-47 |
| Msa0133670 | Msa0356380 | -0.810155 | 1.326531e-50 | -8.615850e-47 |
| Msa0133880 | Msa0356380 | -0.806779 | 6.969431e-50 | -8.615850e-47 |
| Msa0139270 | Msa0356380 | 0.860569 | 1.884906e-63 | -8.615850e-47 |
| Msa0160580 | Msa0356380 | 0.842989 | 1.846216e-58 | -8.615850e-47 |
| Msa0171740 | Msa0356380 | 0.879863 | 8.803593e-70 | -8.615850e-47 |
| Msa0176620 | Msa0356380 | 0.847776 | 9.335105e-60 | -8.615850e-47 |
| Msa0184120 | Msa0356380 | -0.812786 | 3.558822e-51 | -8.615850e-47 |
| Msa0195190 | Msa0356380 | 0.802267 | 6.084193e-49 | -8.615850e-47 |
| Msa0197750 | Msa0356380 | 0.828630 | 8.078649e-55 | -8.615850e-47 |
| Msa0216010 | Msa0356380 | -0.801192 | 1.010871e-48 | -8.615850e-47 |
| Msa0218060 | Msa0356380 | 0.823393 | 1.418781e-53 | -8.615850e-47 |
| Msa0222070 | Msa0356380 | -0.824344 | 8.495159e-54 | -8.615850e-47 |
| Msa0222120 | Msa0356380 | -0.825344 | 4.933648e-54 | -8.615850e-47 |
| Msa0225910 | Msa0356380 | 0.811689 | 6.173178e-51 | -8.615850e-47 |
| Msa0227290 | Msa0356380 | -0.841892 | 3.607781e-58 | -8.615850e-47 |
| Msa0234120 | Msa0356380 | 0.825773 | 3.903841e-54 | -8.615850e-47 |
| Msa0236610 | Msa0356380 | 0.815346 | 9.688388e-52 | -8.615850e-47 |
| Msa0243970 | Msa0356380 | 0.833353 | 5.598547e-56 | -8.615850e-47 |
| Msa0243990 | Msa0356380 | 0.815694 | 8.106606e-52 | -8.615850e-47 |
| Msa0245660 | Msa0356380 | 0.828429 | 9.034473e-55 | -8.615850e-47 |
| Msa0263620 | Msa0356380 | -0.827010 | 1.981112e-54 | -8.615850e-47 |
| Msa0266640 | Msa0356380 | 0.858336 | 8.832505e-63 | -8.615850e-47 |
| Msa0266650 | Msa0356380 | 0.856816 | 2.490565e-62 | -8.615850e-47 |
| Msa0267710 | Msa0356380 | 0.804049 | 2.603304e-49 | -8.615850e-47 |
| Msa0270460 | Msa0356380 | -0.805282 | 1.439345e-49 | -8.615850e-47 |
| Msa0274260 | Msa0356380 | 0.806720 | 7.170853e-50 | -8.615850e-47 |
| Msa0277280 | Msa0356380 | 0.815728 | 7.967864e-52 | -8.615850e-47 |
| Msa0295520 | Msa0356380 | -0.825764 | 3.923136e-54 | -8.615850e-47 |
| Msa0297650 | Msa0356380 | 0.805742 | 1.152286e-49 | -8.615850e-47 |
| Msa0301460 | Msa0356380 | -0.843846 | 1.090225e-58 | -8.615850e-47 |
| Msa0315300 | Msa0356380 | 0.806109 | 9.650344e-50 | -8.615850e-47 |
| Msa0318370 | Msa0356380 | 0.833170 | 6.219198e-56 | -8.615850e-47 |
| Msa0322460 | Msa0356380 | 0.827460 | 1.545945e-54 | -8.615850e-47 |
| Msa0336640 | Msa0356380 | 0.825816 | 3.814509e-54 | -8.615850e-47 |
| Msa0338900 | Msa0356380 | -0.818531 | 1.867522e-52 | -8.615850e-47 |
| Msa0356180 | Msa0356380 | 0.811085 | 8.349507e-51 | -8.615850e-47 |
| Msa0356200 | Msa0356380 | 0.992562 | 4.806567e-194 | -8.615850e-47 |
| Msa0356240 | Msa0356380 | 0.876090 | 1.840520e-68 | -8.615850e-47 |
| Msa0356250 | Msa0356380 | 0.950138 | 3.053913e-108 | -8.615850e-47 |
| Msa0356270 | Msa0356380 | 0.855242 | 7.193134e-62 | -8.615850e-47 |
| Msa0356320 | Msa0356380 | 0.899813 | 1.366149e-77 | -8.615850e-47 |
| Msa0356360 | Msa0356380 | 0.800877 | 1.172895e-48 | -8.615850e-47 |
| Msa0356380 | Msa0356410 | 0.992402 | 4.479469e-193 | -8.615850e-47 |
| Msa0356380 | Msa0375430 | -0.805300 | 1.427067e-49 | -8.615850e-47 |
| Msa0356380 | Msa0377460 | -0.814958 | 1.181634e-51 | -8.615850e-47 |
| Msa0356380 | Msa0389830 | -0.814842 | 1.253536e-51 | -8.615850e-47 |
| Msa0356380 | Msa0393900 | 0.829371 | 5.343808e-55 | -8.615850e-47 |
| Msa0356380 | Msa0396790 | 0.805701 | 1.175745e-49 | -8.615850e-47 |
| Msa0356380 | Msa0403670 | -0.809090 | 2.246956e-50 | -8.615850e-47 |
| Msa0356380 | Msa0404180 | -0.823320 | 1.476086e-53 | -8.615850e-47 |
| Msa0356380 | Msa0405040 | -0.811140 | 8.123831e-51 | -8.615850e-47 |
| Msa0356380 | Msa0409250 | 0.821612 | 3.680812e-53 | -8.615850e-47 |
| Msa0356380 | Msa0409490 | 0.806706 | 7.219820e-50 | -8.615850e-47 |
| Msa0356380 | Msa0414480 | 0.801365 | 9.320863e-49 | -8.615850e-47 |
| Msa0356380 | Msa0418150 | 0.803684 | 3.099477e-49 | -8.615850e-47 |
| Msa0356380 | Msa0424240 | 0.830859 | 2.315848e-55 | -8.615850e-47 |
| Msa0356380 | Msa0426860 | -0.839182 | 1.846312e-57 | -8.615850e-47 |
| Msa0356380 | Msa0426890 | -0.840123 | 1.050704e-57 | -8.615850e-47 |
| Msa0356380 | Msa0444400 | 0.831723 | 1.419997e-55 | -8.615850e-47 |
| Msa0356380 | Msa0445530 | 0.811641 | 6.324809e-51 | -8.615850e-47 |
| Msa0356380 | Msa0449290 | 0.828514 | 8.618888e-55 | -8.615850e-47 |
| Msa0356380 | Msa0449360 | 0.912188 | 2.591158e-83 | -8.615850e-47 |
| Msa0356380 | Msa0449380 | 0.879427 | 1.256809e-69 | -8.615850e-47 |
| Msa0356380 | Msa0449940 | 0.818079 | 2.363750e-52 | -8.615850e-47 |
| Msa0356380 | Msa0453970 | 0.811631 | 6.356166e-51 | -8.615850e-47 |
| Msa0356380 | Msa0456480 | -0.835822 | 1.341767e-56 | -8.615850e-47 |
| Msa0356380 | Msa0464300 | 0.819247 | 1.284043e-52 | -8.615850e-47 |
| Msa0356380 | Msa0464310 | 0.802741 | 4.857555e-49 | -8.615850e-47 |
| Msa0356380 | Msa0467800 | -0.801997 | 6.913010e-49 | -8.615850e-47 |
| Msa0356380 | Msa0467880 | -0.803243 | 3.825758e-49 | -8.615850e-47 |
| Msa0356380 | Msa0471090 | -0.806305 | 8.773145e-50 | -8.615850e-47 |
| Msa0356380 | Msa0473320 | -0.818180 | 2.242554e-52 | -8.615850e-47 |
| Msa0356380 | Msa0478400 | 0.826310 | 2.910432e-54 | -8.615850e-47 |
| Msa0356380 | Msa0487100 | 0.821159 | 4.683141e-53 | -8.615850e-47 |
| Msa0356380 | Msa0491950 | 0.810481 | 1.128286e-50 | -8.615850e-47 |
| Msa0356380 | Msa0493710 | 0.821474 | 3.961697e-53 | -8.615850e-47 |
| Msa0356380 | Msa0517400 | -0.815528 | 8.828036e-52 | -8.615850e-47 |
| Msa0356380 | Msa0531040 | 0.814713 | 1.338974e-51 | -8.615850e-47 |
| Msa0356380 | Msa0533510 | 0.861906 | 7.382411e-64 | -8.615850e-47 |
| Msa0356380 | Msa0533520 | 0.861007 | 1.387619e-63 | -8.615850e-47 |
| Msa0356380 | Msa0538440 | 0.818061 | 2.385741e-52 | -8.615850e-47 |
| Msa0356380 | Msa0538530 | 0.807259 | 5.516056e-50 | -8.615850e-47 |
| Msa0356380 | Msa0548760 | 0.851429 | 8.927403e-61 | -8.615850e-47 |
| Msa0356380 | Msa0549330 | -0.807250 | 5.540855e-50 | -8.615850e-47 |
| Msa0356380 | Msa0549970 | 0.810386 | 1.183041e-50 | -8.615850e-47 |
| Msa0356380 | Msa0558890 | -0.803722 | 3.044191e-49 | -8.615850e-47 |
| Msa0356380 | Msa0589720 | 0.868411 | 6.661527e-66 | -8.615850e-47 |
| Msa0356380 | Msa0589730 | 0.858178 | 9.847947e-63 | -8.615850e-47 |
| Msa0356380 | Msa0589740 | 0.835324 | 1.793448e-56 | -8.615850e-47 |
| Msa0356380 | Msa0589750 | 0.845638 | 3.583505e-59 | -8.615850e-47 |
| Msa0356380 | Msa0594330 | 0.828627 | 8.092001e-55 | -8.615850e-47 |
| Msa0356380 | Msa0603800 | 0.813360 | 2.662183e-51 | -8.615850e-47 |
| Msa0356380 | Msa0605480 | 0.818082 | 2.359275e-52 | -8.615850e-47 |
| Msa0356380 | Msa0606680 | -0.809454 | 1.877589e-50 | -8.615850e-47 |
| Msa0356380 | Msa0623750 | 0.831698 | 1.440000e-55 | -8.615850e-47 |
| Msa0356380 | Msa0630130 | 0.818337 | 2.066692e-52 | -8.615850e-47 |
| Msa0356380 | Msa0634290 | 0.819503 | 1.122177e-52 | -8.615850e-47 |
| Msa0356380 | Msa0635990 | -0.800981 | 1.116914e-48 | -8.615850e-47 |
| Msa0356380 | Msa0638040 | -0.844927 | 5.582840e-59 | -8.615850e-47 |
| Msa0356380 | Msa0640290 | 0.820686 | 6.016762e-53 | -8.615850e-47 |
| Msa0356380 | Msa0640880 | -0.808575 | 2.895238e-50 | -8.615850e-47 |
| Msa0356380 | Msa0645120 | 0.849590 | 2.933303e-60 | -8.615850e-47 |
| Msa0356380 | Msa0646440 | 0.810515 | 1.109554e-50 | -8.615850e-47 |
| Msa0356380 | Msa0653710 | -0.821097 | 4.839726e-53 | -8.615850e-47 |
| Msa0356380 | Msa0668210 | 0.845198 | 4.716186e-59 | -8.615850e-47 |
| Msa0356380 | Msa0668220 | 0.817336 | 3.476456e-52 | -8.615850e-47 |
| Msa0356380 | Msa0677110 | -0.847143 | 1.393036e-59 | -8.615850e-47 |
| Msa0356380 | Msa0684590 | 0.801211 | 1.001897e-48 | -8.615850e-47 |
| Msa0356380 | Msa0684600 | 0.841520 | 4.521771e-58 | -8.615850e-47 |
| Msa0356380 | Msa0698880 | -0.808362 | 3.215254e-50 | -8.615850e-47 |
| Msa0356380 | Msa0698900 | -0.802370 | 5.794757e-49 | -8.615850e-47 |
| Msa0356380 | Msa0705050 | -0.800032 | 1.742798e-48 | -8.615850e-47 |
| Msa0356380 | Msa0715260 | 0.840175 | 1.018471e-57 | -8.615850e-47 |
| Msa0356380 | Msa0716600 | 0.828076 | 1.099109e-54 | -8.615850e-47 |
| Msa0356380 | Msa0718770 | 0.801920 | 7.170212e-49 | -8.615850e-47 |
| Msa0356380 | Msa0729590 | -0.811747 | 5.998767e-51 | -8.615850e-47 |
| Msa0356380 | Msa0730890 | 0.816507 | 5.335696e-52 | -8.615850e-47 |
| Msa0356380 | Msa0757240 | 0.838339 | 3.050448e-57 | -8.615850e-47 |
| Msa0356380 | Msa0758150 | 0.848104 | 7.578293e-60 | -8.615850e-47 |
| Msa0356380 | Msa0766880 | -0.808702 | 2.720173e-50 | -8.615850e-47 |
| Msa0356380 | Msa0776340 | 0.810209 | 1.291405e-50 | -8.615850e-47 |
| Msa0356380 | Msa0782030 | -0.808213 | 3.458499e-50 | -8.615850e-47 |
| Msa0356380 | Msa0793060 | -0.867307 | 1.507523e-65 | -8.615850e-47 |
| Msa0356380 | Msa0797810 | -0.824383 | 8.315705e-54 | -8.615850e-47 |
| Msa0356380 | Msa0798230 | 0.838854 | 2.244744e-57 | -8.615850e-47 |
| Msa0356380 | Msa0817100 | 0.848226 | 7.016789e-60 | -8.615850e-47 |
| Msa0356380 | Msa0822370 | -0.800523 | 1.385141e-48 | -8.615850e-47 |
| Msa0356380 | Msa0824860 | 0.805361 | 1.385216e-49 | -8.615850e-47 |
| Msa0356380 | Msa0833910 | -0.807721 | 4.402550e-50 | -8.615850e-47 |
| Msa0356380 | Msa0834160 | -0.811750 | 5.989728e-51 | -8.615850e-47 |
| Msa0356380 | Msa0836740 | 0.839774 | 1.296066e-57 | -8.615850e-47 |
| Msa0356380 | Msa0854380 | 0.817776 | 2.767162e-52 | -8.615850e-47 |
| Msa0356380 | Msa0868870 | 0.804601 | 1.997932e-49 | -8.615850e-47 |
| Msa0356380 | Msa0886370 | 0.822381 | 2.441591e-53 | -8.615850e-47 |
| Msa0356380 | Msa0896920 | 0.863719 | 2.037259e-64 | -8.615850e-47 |
| Msa0356380 | Msa0896950 | 0.823182 | 1.589157e-53 | -8.615850e-47 |
| Msa0356380 | Msa0932900 | 0.802870 | 4.570112e-49 | -8.615850e-47 |
| Msa0356380 | Msa0932930 | 0.830137 | 3.477798e-55 | -8.615850e-47 |
| Msa0356380 | Msa0933610 | 0.803276 | 3.765410e-49 | -8.615850e-47 |
| Msa0356380 | Msa0949850 | -0.802240 | 6.163596e-49 | -8.615850e-47 |
| Msa0356380 | Msa0951060 | 0.839584 | 1.452301e-57 | -8.615850e-47 |
| Msa0356380 | Msa0962290 | 0.805918 | 1.058453e-49 | -8.615850e-47 |
| Msa0356380 | Msa0967450 | -0.819851 | 9.345873e-53 | -8.615850e-47 |
| Msa0356380 | Msa0970790 | 0.826162 | 3.156493e-54 | -8.615850e-47 |
| Msa0356380 | Msa0985250 | 0.814884 | 1.227481e-51 | -8.615850e-47 |
| Msa0356380 | Msa0986620 | -0.803318 | 3.690816e-49 | -8.615850e-47 |
| Msa0356380 | Msa0987550 | 0.807927 | 3.979499e-50 | -8.615850e-47 |
| Msa0356380 | Msa0992570 | -0.801199 | 1.007556e-48 | -8.615850e-47 |
| Msa0356380 | Msa0996940 | 0.800262 | 1.565075e-48 | -8.615850e-47 |
| Msa0356380 | Msa0996980 | 0.828070 | 1.102867e-54 | -8.615850e-47 |
| Msa0356380 | Msa1006940 | 0.842338 | 2.749281e-58 | -8.615850e-47 |
| Msa0356380 | Msa1024480 | 0.825459 | 4.633598e-54 | -8.615850e-47 |
| Msa0356380 | Msa1024580 | -0.809163 | 2.167378e-50 | -8.615850e-47 |
| Msa0356380 | Msa1030430 | -0.819762 | 9.797678e-53 | -8.615850e-47 |
| Msa0356380 | Msa1036020 | 0.824453 | 8.008047e-54 | -8.615850e-47 |
| Msa0356380 | Msa1046220 | 0.832492 | 9.165764e-56 | -8.615850e-47 |
| Msa0356380 | Msa1061670 | 0.818255 | 2.156578e-52 | -8.615850e-47 |
| Msa0356380 | Msa1061760 | 0.822268 | 2.593950e-53 | -8.615850e-47 |
| Msa0356380 | Msa1064940 | 0.825251 | 5.189899e-54 | -8.615850e-47 |
| Msa0356380 | Msa1069440 | -0.847974 | 8.231056e-60 | -8.615850e-47 |
| Msa0356380 | Msa1076280 | 0.805638 | 1.211736e-49 | -8.615850e-47 |
| Msa0356380 | Msa1079610 | -0.811965 | 5.375710e-51 | -8.615850e-47 |
| Msa0356380 | Msa1083100 | 0.834622 | 2.695155e-56 | -8.615850e-47 |
| Msa0356380 | Msa1099640 | 0.802790 | 4.747105e-49 | -8.615850e-47 |
| Msa0356380 | Msa1100560 | 0.813534 | 2.438480e-51 | -8.615850e-47 |
| Msa0356380 | Msa1103450 | 0.807522 | 4.850951e-50 | -8.615850e-47 |
| Msa0356380 | Msa1106960 | 0.806465 | 8.118370e-50 | -8.615850e-47 |
| Msa0356380 | Msa1107320 | 0.817254 | 3.627734e-52 | -8.615850e-47 |
| Msa0356380 | Msa1110040 | 0.809695 | 1.666306e-50 | -8.615850e-47 |
| Msa0356380 | Msa1124440 | -0.840694 | 7.450893e-58 | -8.615850e-47 |
| Msa0356380 | Msa1130070 | -0.806870 | 6.667716e-50 | -8.615850e-47 |
| Msa0356380 | Msa1136060 | 0.807676 | 4.499620e-50 | -8.615850e-47 |
| Msa0356380 | Msa1138600 | -0.865773 | 4.630669e-65 | -8.615850e-47 |
| Msa0356380 | Msa1150860 | 0.812528 | 4.052470e-51 | -8.615850e-47 |
| Msa0356380 | Msa1150880 | 0.805435 | 1.336583e-49 | -8.615850e-47 |
| Msa0356380 | Msa1161160 | -0.814095 | 1.834667e-51 | -8.615850e-47 |
| Msa0356380 | Msa1165860 | 0.800768 | 1.234499e-48 | -8.615850e-47 |
| Msa0356380 | Msa1168130 | -0.810391 | 1.179814e-50 | -8.615850e-47 |
| Msa0356380 | Msa1173290 | 0.833546 | 5.013214e-56 | -8.615850e-47 |
| Msa0356380 | Msa1173410 | -0.835551 | 1.570701e-56 | -8.615850e-47 |
| Msa0356380 | Msa1175590 | -0.816677 | 4.887694e-52 | -8.615850e-47 |
| Msa0356380 | Msa1179190 | 0.819074 | 1.405303e-52 | -8.615850e-47 |
| Msa0356380 | Msa1190090 | 0.864848 | 9.047079e-65 | -8.615850e-47 |
| Msa0356380 | Msa1190140 | 0.802156 | 6.411889e-49 | -8.615850e-47 |
| Msa0356380 | Msa1198420 | -0.808975 | 2.378088e-50 | -8.615850e-47 |
| Msa0356380 | Msa1211160 | 0.818172 | 2.251700e-52 | -8.615850e-47 |
| Msa0356380 | Msa1219780 | 0.824114 | 9.618506e-54 | -8.615850e-47 |
| Msa0356380 | Msa1221170 | 0.843020 | 1.810901e-58 | -8.615850e-47 |
| Msa0356380 | Msa1233620 | 0.847003 | 1.522351e-59 | -8.615850e-47 |
| Msa0356380 | Msa1235760 | -0.800769 | 1.234027e-48 | -8.615850e-47 |
| Msa0356380 | Msa1235770 | -0.824032 | 1.005658e-53 | -8.615850e-47 |
| Msa0356380 | Msa1246420 | -0.853664 | 2.058276e-61 | -8.615850e-47 |
| Msa0356380 | Msa1258020 | 0.860859 | 1.539984e-63 | -8.615850e-47 |
| Msa0356380 | Msa1265500 | 0.837793 | 4.214299e-57 | -8.615850e-47 |
| Msa0356380 | Msa1266710 | 0.802900 | 4.503758e-49 | -8.615850e-47 |
| Msa0356380 | Msa1275840 | 0.868903 | 4.617470e-66 | -8.615850e-47 |
| Msa0356380 | Msa1298740 | -0.805279 | 1.441363e-49 | -8.615850e-47 |
| Msa0356380 | Msa1299310 | 0.825549 | 4.411038e-54 | -8.615850e-47 |
| Msa0356380 | Msa1303470 | -0.800264 | 1.563495e-48 | -8.615850e-47 |
| Msa0356380 | Msa1309910 | -0.816950 | 4.246058e-52 | -8.615850e-47 |
| Msa0356380 | Msa1314020 | 0.859146 | 5.059089e-63 | -8.615850e-47 |
| Msa0356380 | Msa1323150 | 0.805649 | 1.205457e-49 | -8.615850e-47 |
| Msa0356380 | Msa1329770 | 0.812946 | 3.282896e-51 | -8.615850e-47 |
| Msa0356380 | Msa1339490 | 0.841206 | 5.470404e-58 | -8.615850e-47 |
| Msa0356380 | Msa1350490 | 0.824646 | 7.212561e-54 | -8.615850e-47 |
| Msa0356380 | Msa1355330 | 0.807309 | 5.383454e-50 | -8.615850e-47 |
| Msa0356380 | Msa1362520 | 0.811696 | 6.151968e-51 | -8.615850e-47 |
| Msa0356380 | Msa1370930 | 0.807006 | 6.239122e-50 | -8.615850e-47 |
| Msa0356380 | Msa1378950 | 0.861022 | 1.373081e-63 | -8.615850e-47 |
| Msa0356380 | Msa1379370 | -0.811818 | 5.786611e-51 | -8.615850e-47 |
| Msa0356380 | Msa1382180 | 0.805723 | 1.163031e-49 | -8.615850e-47 |
| Msa0356380 | Msa1393440 | 0.800650 | 1.304912e-48 | -8.615850e-47 |
| Msa0356380 | Msa1395690 | 0.846703 | 1.838128e-59 | -8.615850e-47 |
| Msa0356380 | Msa1401650 | 0.855113 | 7.845711e-62 | -8.615850e-47 |
| Msa0356380 | Msa1406230 | -0.842548 | 2.417089e-58 | -8.615850e-47 |
| Msa0356380 | Msa1407210 | 0.806689 | 7.280392e-50 | -8.615850e-47 |
| Msa0356380 | Msa1409600 | 0.806823 | 6.823011e-50 | -8.615850e-47 |
| Msa0356380 | Msa1411550 | 0.826518 | 2.596772e-54 | -8.615850e-47 |
| Msa0356380 | Msa1441300 | 0.830661 | 2.590315e-55 | -8.615850e-47 |
| Msa0356380 | Msa1445780 | 0.814190 | 1.747789e-51 | -8.615850e-47 |
| Msa0356380 | Msa1448150 | 0.824959 | 6.082316e-54 | -8.615850e-47 |
| Msa0356380 | Msa1452200 | -0.802822 | 4.674707e-49 | -8.615850e-47 |
| Msa0356380 | Msa1452920 | 0.801149 | 1.032003e-48 | -8.615850e-47 |
| Msa0356380 | Msa1453650 | 0.807890 | 4.051634e-50 | -8.615850e-47 |
| Msa0356380 | Msa1456600 | 0.802287 | 6.027177e-49 | -8.615850e-47 |
| Msa0356380 | Msa1458920 | -0.817931 | 2.552758e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356380 | MtrunA17_Chr3g0090571 | 74.026 | 154 | 40 | 0 | 1 | 154 | 1 | 154 | 3.02e-83 | 241 |
| Msa0356380 | MtrunA17_Chr7g0231991 | 54.815 | 135 | 54 | 3 | 23 | 154 | 2 | 132 | 2.75e-46 | 147 |
| Msa0356380 | MtrunA17_Chr7g0232011 | 51.613 | 155 | 64 | 6 | 1 | 154 | 1 | 145 | 1.68e-45 | 145 |
| Msa0356380 | MtrunA17_Chr6g0456951 | 50.000 | 150 | 56 | 6 | 1 | 148 | 1 | 133 | 3.19e-38 | 127 |
| Msa0356380 | MtrunA17_Chr3g0111281 | 45.161 | 155 | 63 | 5 | 1 | 150 | 1 | 138 | 2.46e-36 | 122 |
| Msa0356380 | MtrunA17_Chr3g0111261 | 47.712 | 153 | 58 | 5 | 1 | 150 | 1 | 134 | 7.07e-34 | 115 |
| Msa0356380 | MtrunA17_Chr7g0236791 | 47.143 | 140 | 64 | 6 | 1 | 136 | 1 | 134 | 1.05e-33 | 115 |
| Msa0356380 | MtrunA17_Chr8g0344771 | 50.450 | 111 | 52 | 3 | 36 | 145 | 11 | 119 | 1.91e-33 | 114 |
| Msa0356380 | MtrunA17_Chr3g0111111 | 40.645 | 155 | 70 | 4 | 1 | 150 | 1 | 138 | 7.96e-33 | 113 |
| Msa0356380 | MtrunA17_Chr8g0344791 | 54.902 | 102 | 43 | 3 | 36 | 136 | 11 | 110 | 3.42e-32 | 111 |
| Msa0356380 | MtrunA17_Chr7g0236801 | 46.429 | 140 | 66 | 6 | 1 | 136 | 1 | 135 | 2.11e-31 | 109 |
| Msa0356380 | MtrunA17_Chr3g0111351 | 42.754 | 138 | 66 | 4 | 1 | 134 | 9 | 137 | 8.36e-31 | 108 |
| Msa0356380 | MtrunA17_Chr3g0111131 | 45.038 | 131 | 67 | 2 | 1 | 131 | 1 | 126 | 9.94e-31 | 107 |
| Msa0356380 | MtrunA17_Chr6g0464071 | 43.038 | 158 | 56 | 6 | 1 | 150 | 1 | 132 | 4.27e-30 | 106 |
| Msa0356380 | MtrunA17_Chr3g0111241 | 46.721 | 122 | 55 | 4 | 1 | 119 | 1 | 115 | 1.45e-29 | 104 |
| Msa0356380 | MtrunA17_Chr3g0104571 | 42.949 | 156 | 65 | 7 | 1 | 152 | 1 | 136 | 1.72e-29 | 104 |
| Msa0356380 | MtrunA17_Chr3g0111071 | 43.885 | 139 | 66 | 6 | 1 | 136 | 1 | 130 | 2.59e-29 | 104 |
| Msa0356380 | MtrunA17_Chr6g0468621 | 43.506 | 154 | 66 | 8 | 1 | 153 | 1 | 134 | 1.10e-28 | 102 |
| Msa0356380 | MtrunA17_Chr8g0344801 | 54.444 | 90 | 38 | 3 | 49 | 136 | 7 | 95 | 4.74e-28 | 100 |
| Msa0356380 | MtrunA17_Chr6g0468601 | 41.290 | 155 | 71 | 7 | 1 | 153 | 1 | 137 | 9.14e-28 | 100 |
| Msa0356380 | MtrunA17_Chr3g0111081 | 44.203 | 138 | 67 | 6 | 1 | 136 | 1 | 130 | 1.80e-27 | 99.8 |
| Msa0356380 | MtrunA17_Chr6g0456991 | 60.256 | 78 | 29 | 2 | 51 | 127 | 29 | 105 | 1.59e-26 | 96.3 |
| Msa0356380 | MtrunA17_Chr8g0357331 | 53.086 | 81 | 38 | 0 | 74 | 154 | 21 | 101 | 2.87e-26 | 95.5 |
| Msa0356380 | MtrunA17_Chr3g0111191 | 39.837 | 123 | 63 | 3 | 1 | 118 | 1 | 117 | 4.59e-24 | 90.5 |
| Msa0356380 | MtrunA17_Chr4g0012121 | 38.750 | 160 | 77 | 6 | 1 | 154 | 1 | 145 | 2.21e-22 | 87.0 |
| Msa0356380 | MtrunA17_Chr3g0092701 | 64.516 | 62 | 22 | 0 | 1 | 62 | 1 | 62 | 2.22e-22 | 84.7 |
| Msa0356380 | MtrunA17_Chr3g0111221 | 46.667 | 90 | 43 | 2 | 47 | 134 | 21 | 107 | 6.99e-22 | 84.7 |
| Msa0356380 | MtrunA17_Chr1g0153591 | 39.370 | 127 | 54 | 3 | 1 | 124 | 1 | 107 | 8.63e-22 | 84.3 |
| Msa0356380 | MtrunA17_Chr7g0225821 | 37.302 | 126 | 71 | 5 | 1 | 124 | 1 | 120 | 8.14e-21 | 82.4 |
| Msa0356380 | MtrunA17_Chr3g0092851 | 63.793 | 58 | 20 | 1 | 1 | 57 | 1 | 58 | 3.26e-20 | 79.0 |
| Msa0356380 | MtrunA17_Chr3g0092881 | 58.571 | 70 | 28 | 1 | 1 | 69 | 1 | 70 | 4.86e-20 | 78.6 |
| Msa0356380 | MtrunA17_Chr3g0092841 | 60.000 | 70 | 27 | 1 | 1 | 69 | 1 | 70 | 8.82e-20 | 78.2 |
| Msa0356380 | MtrunA17_Chr3g0092801 | 60.000 | 70 | 27 | 1 | 1 | 69 | 1 | 70 | 8.82e-20 | 78.2 |
| Msa0356380 | MtrunA17_Chr3g0111311 | 52.326 | 86 | 35 | 4 | 35 | 119 | 10 | 90 | 9.72e-20 | 78.6 |
| Msa0356380 | MtrunA17_Chr8g0359071 | 35.616 | 146 | 70 | 6 | 3 | 144 | 4 | 129 | 3.62e-19 | 78.2 |
| Msa0356380 | MtrunA17_Chr3g0092704 | 63.793 | 58 | 21 | 0 | 1 | 58 | 1 | 58 | 3.72e-18 | 74.3 |
| Msa0356380 | MtrunA17_Chr3g0090581 | 63.265 | 49 | 18 | 0 | 21 | 69 | 22 | 70 | 3.36e-16 | 68.9 |
| Msa0356380 | MtrunA17_Chr3g0092901 | 62.963 | 54 | 19 | 1 | 1 | 54 | 1 | 53 | 4.76e-15 | 65.9 |
| Msa0356380 | MtrunA17_Chr3g0111711 | 38.843 | 121 | 58 | 6 | 1 | 117 | 1 | 109 | 3.09e-14 | 64.7 |
| Msa0356380 | MtrunA17_Chr3g0111201 | 47.619 | 63 | 22 | 1 | 88 | 150 | 3 | 54 | 1.27e-13 | 61.6 |
| Msa0356380 | MtrunA17_Chr3g0092771 | 87.879 | 33 | 4 | 0 | 1 | 33 | 1 | 33 | 3.09e-13 | 60.8 |
| Msa0356380 | MtrunA17_Chr3g0092941 | 78.378 | 37 | 7 | 1 | 1 | 36 | 1 | 37 | 1.08e-11 | 56.6 |
| Msa0356380 | MtrunA17_Chr3g0092731 | 46.032 | 63 | 25 | 1 | 1 | 63 | 1 | 54 | 4.02e-11 | 55.5 |
| Msa0356380 | MtrunA17_Chr6g0483481 | 59.524 | 42 | 17 | 0 | 91 | 132 | 73 | 114 | 9.29e-11 | 56.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 41 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCTCCCTTGGTGGTTATT+TGG | 0.237560 | 3_1:+35230531 | Msa0356380:CDS |
| CCTAATGCTGATATTGAATA+TGG | 0.285356 | 3_1:+35230678 | Msa0356380:CDS |
| TTTGTTTCCAATTGATCAAT+TGG | 0.321512 | 3_1:+35230913 | Msa0356380:three_prime_UTR |
| TTGTGATTACCGCAATAATT+CGG | 0.329100 | 3_1:-35230498 | None:intergenic |
| AAGAAATCCAATTGATCAAT+TGG | 0.360164 | 3_1:-35230920 | None:intergenic |
| TTATGTTAAGCTTGCTACTT+TGG | 0.363249 | 3_1:+35230166 | Msa0356380:CDS |
| TGTGATTACCGCAATAATTC+GGG | 0.372686 | 3_1:-35230497 | None:intergenic |
| CTGCTTCAACGTTCTTCGTC+TGG | 0.376847 | 3_1:-35230434 | None:intergenic |
| AGCTTAACATAAGTCATTGT+TGG | 0.383649 | 3_1:-35230155 | None:intergenic |
| AGACTACTTGAAGATGGCTT+TGG | 0.386657 | 3_1:+35230803 | Msa0356380:CDS |
| CTCCCTTGGTGGTTATTTGG+AGG | 0.393690 | 3_1:+35230534 | Msa0356380:CDS |
| GCAGAACGTTACTTCAAGAT+TGG | 0.399752 | 3_1:+35230726 | Msa0356380:CDS |
| ATTGATCAATTGGATTTCTT+CGG | 0.409409 | 3_1:+35230923 | Msa0356380:three_prime_UTR |
| CGAGACATATCATTCTTAAG+TGG | 0.433054 | 3_1:-35230832 | None:intergenic |
| CCATATTCAATATCAGCATT+AGG | 0.437256 | 3_1:-35230678 | None:intergenic |
| CCGCAATAATTCGGGTCAAA+TGG | 0.448213 | 3_1:-35230489 | None:intergenic |
| CGGGTCAAATGGTGAACAAA+AGG | 0.469881 | 3_1:-35230478 | None:intergenic |
| AAGATTGTCGCTGTCTCCCT+TGG | 0.475042 | 3_1:+35230520 | Msa0356380:CDS |
| TCTTCGGTATGTATTGTGCA+TGG | 0.484118 | 3_1:+35230939 | Msa0356380:three_prime_UTR |
| GGTAATTGCATAAATCCAAC+TGG | 0.487242 | 3_1:+35230555 | Msa0356380:CDS |
| ATTGTCGCTGTCTCCCTTGG+TGG | 0.496818 | 3_1:+35230523 | Msa0356380:CDS |
| GAGTGCATCAAGAAGGGAAG+TGG | 0.522512 | 3_1:+35230636 | Msa0356380:CDS |
| CTTCGGTATGTATTGTGCAT+GGG | 0.523431 | 3_1:+35230940 | Msa0356380:three_prime_UTR |
| ATAGTATGTTCAGAACCAGT+TGG | 0.528893 | 3_1:-35230570 | None:intergenic |
| GCAGCGAGCTGTCCGTATGC+AGG | 0.535912 | 3_1:+35230453 | Msa0356380:CDS |
| AATTGATCAATTGGAAACAA+AGG | 0.536616 | 3_1:-35230911 | None:intergenic |
| TCATGCCGAGTGCATCAAGA+AGG | 0.559241 | 3_1:+35230629 | Msa0356380:CDS |
| CGTTCTGCTTCATTTACAGA+GGG | 0.566815 | 3_1:-35230711 | None:intergenic |
| CCATTTGACCCGAATTATTG+CGG | 0.576067 | 3_1:+35230489 | Msa0356380:CDS |
| GAACAAAAGGAACCTGCATA+CGG | 0.576509 | 3_1:-35230465 | None:intergenic |
| ACAAATATACATACAAAATG+TGG | 0.595595 | 3_1:-35230204 | None:intergenic |
| ACTTCCCTTCTTGATGCACT+CGG | 0.605609 | 3_1:-35230634 | None:intergenic |
| TACCTCCAAATAACCACCAA+GGG | 0.606319 | 3_1:-35230536 | None:intergenic |
| CATGCCGAGTGCATCAAGAA+GGG | 0.625240 | 3_1:+35230630 | Msa0356380:CDS |
| ACGTTCTGCTTCATTTACAG+AGG | 0.626101 | 3_1:-35230712 | None:intergenic |
| ATGCTGATATTGAATATGGA+TGG | 0.639133 | 3_1:+35230682 | Msa0356380:CDS |
| AGTGCATCAAGAAGGGAAGT+GGG | 0.648471 | 3_1:+35230637 | Msa0356380:CDS |
| CATGCACATGATAACATGCA+TGG | 0.677543 | 3_1:-35230990 | None:intergenic |
| TTACCTCCAAATAACCACCA+AGG | 0.709136 | 3_1:-35230537 | None:intergenic |
| ACATACTATGAAGATGATCG+AGG | 0.709642 | 3_1:+35230584 | Msa0356380:CDS |
| TAGATGCATGACAACATGCA+TGG | 0.743352 | 3_1:-35230870 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATATAACATATATATTT+AGG | - | chr3_1:35230362-35230381 | None:intergenic | 10.0% |
| !! | TGAATATAACATATATATTT+AGG | - | chr3_1:35230362-35230381 | None:intergenic | 10.0% |
| !! | TCGATATATATTTATATGTT+AGG | + | chr3_1:35230251-35230270 | Msa0356380:intron | 15.0% |
| !! | TCGATATATATTTATATGTT+AGG | + | chr3_1:35230251-35230270 | Msa0356380:intron | 15.0% |
| !! | ACAAATATACATACAAAATG+TGG | - | chr3_1:35230207-35230226 | None:intergenic | 20.0% |
| !! | CATATATATTTAGGAAAGTT+TGG | - | chr3_1:35230353-35230372 | None:intergenic | 20.0% |
| !!! | TGAAGAATTTTTTTACTACA+GGG | - | chr3_1:35230758-35230777 | None:intergenic | 20.0% |
| !!! | TTGAAGAATTTTTTTACTAC+AGG | - | chr3_1:35230759-35230778 | None:intergenic | 20.0% |
| !! | ACAAATATACATACAAAATG+TGG | - | chr3_1:35230207-35230226 | None:intergenic | 20.0% |
| !! | CATATATATTTAGGAAAGTT+TGG | - | chr3_1:35230353-35230372 | None:intergenic | 20.0% |
| !!! | TGAAGAATTTTTTTACTACA+GGG | - | chr3_1:35230758-35230777 | None:intergenic | 20.0% |
| !!! | TTGAAGAATTTTTTTACTAC+AGG | - | chr3_1:35230759-35230778 | None:intergenic | 20.0% |
| ! | TTATATTCACACATGTGTAT+TGG | + | chr3_1:35230373-35230392 | Msa0356380:intron | 25.0% |
| ! | AATTGATCAATTGGAAACAA+AGG | - | chr3_1:35230914-35230933 | None:intergenic | 25.0% |
| ! | TTTGTTTCCAATTGATCAAT+TGG | + | chr3_1:35230913-35230932 | Msa0356380:three_prime_UTR | 25.0% |
| ! | AAGAAATCCAATTGATCAAT+TGG | - | chr3_1:35230923-35230942 | None:intergenic | 25.0% |
| ! | ATTGATCAATTGGATTTCTT+CGG | + | chr3_1:35230923-35230942 | Msa0356380:three_prime_UTR | 25.0% |
| ! | TTATATTCACACATGTGTAT+TGG | + | chr3_1:35230373-35230392 | Msa0356380:intron | 25.0% |
| ! | AATTGATCAATTGGAAACAA+AGG | - | chr3_1:35230914-35230933 | None:intergenic | 25.0% |
| ! | TTTGTTTCCAATTGATCAAT+TGG | + | chr3_1:35230913-35230932 | Msa0356380:three_prime_UTR | 25.0% |
| ! | AAGAAATCCAATTGATCAAT+TGG | - | chr3_1:35230923-35230942 | None:intergenic | 25.0% |
| ! | ATTGATCAATTGGATTTCTT+CGG | + | chr3_1:35230923-35230942 | Msa0356380:three_prime_UTR | 25.0% |
| AGCTTAACATAAGTCATTGT+TGG | - | chr3_1:35230158-35230177 | None:intergenic | 30.0% | |
| !! | TTATGTTAAGCTTGCTACTT+TGG | + | chr3_1:35230166-35230185 | Msa0356380:CDS | 30.0% |
| TTGTGATTACCGCAATAATT+CGG | - | chr3_1:35230501-35230520 | None:intergenic | 30.0% | |
| CCATATTCAATATCAGCATT+AGG | - | chr3_1:35230681-35230700 | None:intergenic | 30.0% | |
| CCTAATGCTGATATTGAATA+TGG | + | chr3_1:35230678-35230697 | Msa0356380:CDS | 30.0% | |
| ATGCTGATATTGAATATGGA+TGG | + | chr3_1:35230682-35230701 | Msa0356380:CDS | 30.0% | |
| !!! | GAATTTTTTTACTACAGGGT+TGG | - | chr3_1:35230754-35230773 | None:intergenic | 30.0% |
| !! | GTCTTTTTCATTAGAGTTTG+AGG | - | chr3_1:35230787-35230806 | None:intergenic | 30.0% |
| TGAAAAAGACTACTTGAAGA+TGG | + | chr3_1:35230797-35230816 | Msa0356380:CDS | 30.0% | |
| AGCTTAACATAAGTCATTGT+TGG | - | chr3_1:35230158-35230177 | None:intergenic | 30.0% | |
| !! | TTATGTTAAGCTTGCTACTT+TGG | + | chr3_1:35230166-35230185 | Msa0356380:CDS | 30.0% |
| TTGTGATTACCGCAATAATT+CGG | - | chr3_1:35230501-35230520 | None:intergenic | 30.0% | |
| CCATATTCAATATCAGCATT+AGG | - | chr3_1:35230681-35230700 | None:intergenic | 30.0% | |
| CCTAATGCTGATATTGAATA+TGG | + | chr3_1:35230678-35230697 | Msa0356380:CDS | 30.0% | |
| ATGCTGATATTGAATATGGA+TGG | + | chr3_1:35230682-35230701 | Msa0356380:CDS | 30.0% | |
| !!! | GAATTTTTTTACTACAGGGT+TGG | - | chr3_1:35230754-35230773 | None:intergenic | 30.0% |
| !! | GTCTTTTTCATTAGAGTTTG+AGG | - | chr3_1:35230787-35230806 | None:intergenic | 30.0% |
| TGAAAAAGACTACTTGAAGA+TGG | + | chr3_1:35230797-35230816 | Msa0356380:CDS | 30.0% | |
| ATGGCAAAGGCAGTTAAAAT+TGG | - | chr3_1:35230401-35230420 | None:intergenic | 35.0% | |
| TGTGATTACCGCAATAATTC+GGG | - | chr3_1:35230500-35230519 | None:intergenic | 35.0% | |
| GGTAATTGCATAAATCCAAC+TGG | + | chr3_1:35230555-35230574 | Msa0356380:CDS | 35.0% | |
| ATAGTATGTTCAGAACCAGT+TGG | - | chr3_1:35230573-35230592 | None:intergenic | 35.0% | |
| ACATACTATGAAGATGATCG+AGG | + | chr3_1:35230584-35230603 | Msa0356380:CDS | 35.0% | |
| ! | GCATGAGTTTTGCATAAGTT+AGG | - | chr3_1:35230615-35230634 | None:intergenic | 35.0% |
| CGAGACATATCATTCTTAAG+TGG | - | chr3_1:35230835-35230854 | None:intergenic | 35.0% | |
| ATGGCAAAGGCAGTTAAAAT+TGG | - | chr3_1:35230401-35230420 | None:intergenic | 35.0% | |
| TGTGATTACCGCAATAATTC+GGG | - | chr3_1:35230500-35230519 | None:intergenic | 35.0% | |
| GGTAATTGCATAAATCCAAC+TGG | + | chr3_1:35230555-35230574 | Msa0356380:CDS | 35.0% | |
| ATAGTATGTTCAGAACCAGT+TGG | - | chr3_1:35230573-35230592 | None:intergenic | 35.0% | |
| ACATACTATGAAGATGATCG+AGG | + | chr3_1:35230584-35230603 | Msa0356380:CDS | 35.0% | |
| ! | GCATGAGTTTTGCATAAGTT+AGG | - | chr3_1:35230615-35230634 | None:intergenic | 35.0% |
| CGAGACATATCATTCTTAAG+TGG | - | chr3_1:35230835-35230854 | None:intergenic | 35.0% | |
| ACGATTACTGCAAATGGCAA+AGG | - | chr3_1:35230414-35230433 | None:intergenic | 40.0% | |
| GAACAAAAGGAACCTGCATA+CGG | - | chr3_1:35230468-35230487 | None:intergenic | 40.0% | |
| CCATTTGACCCGAATTATTG+CGG | + | chr3_1:35230489-35230508 | Msa0356380:CDS | 40.0% | |
| TACCTCCAAATAACCACCAA+GGG | - | chr3_1:35230539-35230558 | None:intergenic | 40.0% | |
| TTACCTCCAAATAACCACCA+AGG | - | chr3_1:35230540-35230559 | None:intergenic | 40.0% | |
| CGTTCTGCTTCATTTACAGA+GGG | - | chr3_1:35230714-35230733 | None:intergenic | 40.0% | |
| ACGTTCTGCTTCATTTACAG+AGG | - | chr3_1:35230715-35230734 | None:intergenic | 40.0% | |
| GCAGAACGTTACTTCAAGAT+TGG | + | chr3_1:35230726-35230745 | Msa0356380:CDS | 40.0% | |
| AGACTACTTGAAGATGGCTT+TGG | + | chr3_1:35230803-35230822 | Msa0356380:CDS | 40.0% | |
| TAGATGCATGACAACATGCA+TGG | - | chr3_1:35230873-35230892 | None:intergenic | 40.0% | |
| TCTTCGGTATGTATTGTGCA+TGG | + | chr3_1:35230939-35230958 | Msa0356380:three_prime_UTR | 40.0% | |
| CTTCGGTATGTATTGTGCAT+GGG | + | chr3_1:35230940-35230959 | Msa0356380:three_prime_UTR | 40.0% | |
| ACGATTACTGCAAATGGCAA+AGG | - | chr3_1:35230414-35230433 | None:intergenic | 40.0% | |
| GAACAAAAGGAACCTGCATA+CGG | - | chr3_1:35230468-35230487 | None:intergenic | 40.0% | |
| CCATTTGACCCGAATTATTG+CGG | + | chr3_1:35230489-35230508 | Msa0356380:CDS | 40.0% | |
| TACCTCCAAATAACCACCAA+GGG | - | chr3_1:35230539-35230558 | None:intergenic | 40.0% | |
| TTACCTCCAAATAACCACCA+AGG | - | chr3_1:35230540-35230559 | None:intergenic | 40.0% | |
| CGTTCTGCTTCATTTACAGA+GGG | - | chr3_1:35230714-35230733 | None:intergenic | 40.0% | |
| ACGTTCTGCTTCATTTACAG+AGG | - | chr3_1:35230715-35230734 | None:intergenic | 40.0% | |
| GCAGAACGTTACTTCAAGAT+TGG | + | chr3_1:35230726-35230745 | Msa0356380:CDS | 40.0% | |
| AGACTACTTGAAGATGGCTT+TGG | + | chr3_1:35230803-35230822 | Msa0356380:CDS | 40.0% | |
| TAGATGCATGACAACATGCA+TGG | - | chr3_1:35230873-35230892 | None:intergenic | 40.0% | |
| TCTTCGGTATGTATTGTGCA+TGG | + | chr3_1:35230939-35230958 | Msa0356380:three_prime_UTR | 40.0% | |
| CTTCGGTATGTATTGTGCAT+GGG | + | chr3_1:35230940-35230959 | Msa0356380:three_prime_UTR | 40.0% | |
| GTCTGGACGATTACTGCAAA+TGG | - | chr3_1:35230420-35230439 | None:intergenic | 45.0% | |
| CGGGTCAAATGGTGAACAAA+AGG | - | chr3_1:35230481-35230500 | None:intergenic | 45.0% | |
| CCGCAATAATTCGGGTCAAA+TGG | - | chr3_1:35230492-35230511 | None:intergenic | 45.0% | |
| ! | TGTCTCCCTTGGTGGTTATT+TGG | + | chr3_1:35230531-35230550 | Msa0356380:CDS | 45.0% |
| ACTTCCCTTCTTGATGCACT+CGG | - | chr3_1:35230637-35230656 | None:intergenic | 45.0% | |
| AGTGCATCAAGAAGGGAAGT+GGG | + | chr3_1:35230637-35230656 | Msa0356380:CDS | 45.0% | |
| GTCTGGACGATTACTGCAAA+TGG | - | chr3_1:35230420-35230439 | None:intergenic | 45.0% | |
| CGGGTCAAATGGTGAACAAA+AGG | - | chr3_1:35230481-35230500 | None:intergenic | 45.0% | |
| CCGCAATAATTCGGGTCAAA+TGG | - | chr3_1:35230492-35230511 | None:intergenic | 45.0% | |
| ! | TGTCTCCCTTGGTGGTTATT+TGG | + | chr3_1:35230531-35230550 | Msa0356380:CDS | 45.0% |
| ACTTCCCTTCTTGATGCACT+CGG | - | chr3_1:35230637-35230656 | None:intergenic | 45.0% | |
| AGTGCATCAAGAAGGGAAGT+GGG | + | chr3_1:35230637-35230656 | Msa0356380:CDS | 45.0% | |
| CTGCTTCAACGTTCTTCGTC+TGG | - | chr3_1:35230437-35230456 | None:intergenic | 50.0% | |
| AAGATTGTCGCTGTCTCCCT+TGG | + | chr3_1:35230520-35230539 | Msa0356380:CDS | 50.0% | |
| ! | CTCCCTTGGTGGTTATTTGG+AGG | + | chr3_1:35230534-35230553 | Msa0356380:CDS | 50.0% |
| TCATGCCGAGTGCATCAAGA+AGG | + | chr3_1:35230629-35230648 | Msa0356380:CDS | 50.0% | |
| CATGCCGAGTGCATCAAGAA+GGG | + | chr3_1:35230630-35230649 | Msa0356380:CDS | 50.0% | |
| GAGTGCATCAAGAAGGGAAG+TGG | + | chr3_1:35230636-35230655 | Msa0356380:CDS | 50.0% | |
| CTGCTTCAACGTTCTTCGTC+TGG | - | chr3_1:35230437-35230456 | None:intergenic | 50.0% | |
| AAGATTGTCGCTGTCTCCCT+TGG | + | chr3_1:35230520-35230539 | Msa0356380:CDS | 50.0% | |
| ! | CTCCCTTGGTGGTTATTTGG+AGG | + | chr3_1:35230534-35230553 | Msa0356380:CDS | 50.0% |
| TCATGCCGAGTGCATCAAGA+AGG | + | chr3_1:35230629-35230648 | Msa0356380:CDS | 50.0% | |
| CATGCCGAGTGCATCAAGAA+GGG | + | chr3_1:35230630-35230649 | Msa0356380:CDS | 50.0% | |
| GAGTGCATCAAGAAGGGAAG+TGG | + | chr3_1:35230636-35230655 | Msa0356380:CDS | 50.0% | |
| ATTGTCGCTGTCTCCCTTGG+TGG | + | chr3_1:35230523-35230542 | Msa0356380:CDS | 55.0% | |
| ATTGTCGCTGTCTCCCTTGG+TGG | + | chr3_1:35230523-35230542 | Msa0356380:CDS | 55.0% | |
| GCAGCGAGCTGTCCGTATGC+AGG | + | chr3_1:35230453-35230472 | Msa0356380:CDS | 65.0% | |
| GCAGCGAGCTGTCCGTATGC+AGG | + | chr3_1:35230453-35230472 | Msa0356380:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 35230103 | 35231004 | 35230103 | ID=Msa0356380;Name=Msa0356380 |
| chr3_1 | mRNA | 35230103 | 35231004 | 35230103 | ID=Msa0356380-mRNA-1;Parent=Msa0356380;Name=Msa0356380-mRNA-1;_AED=0.04;_eAED=0.04;_QI=58|1|1|1|1|1|2|165|154 |
| chr3_1 | exon | 35230103 | 35230212 | 35230103 | ID=Msa0356380-mRNA-1:exon:6529;Parent=Msa0356380-mRNA-1 |
| chr3_1 | exon | 35230427 | 35231004 | 35230427 | ID=Msa0356380-mRNA-1:exon:6530;Parent=Msa0356380-mRNA-1 |
| chr3_1 | five_prime_UTR | 35230103 | 35230160 | 35230103 | ID=Msa0356380-mRNA-1:five_prime_utr;Parent=Msa0356380-mRNA-1 |
| chr3_1 | CDS | 35230161 | 35230212 | 35230161 | ID=Msa0356380-mRNA-1:cds;Parent=Msa0356380-mRNA-1 |
| chr3_1 | CDS | 35230427 | 35230839 | 35230427 | ID=Msa0356380-mRNA-1:cds;Parent=Msa0356380-mRNA-1 |
| chr3_1 | three_prime_UTR | 35230840 | 35231004 | 35230840 | ID=Msa0356380-mRNA-1:three_prime_utr;Parent=Msa0356380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
