Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205760 | XP_024637044.1 | 96.471 | 340 | 11 | 1 | 38 | 376 | 17 | 356 | 0.0 | 657 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205760 | sp|O49726|PUP21_ARATH | 51.695 | 354 | 160 | 2 | 27 | 376 | 12 | 358 | 8.48e-118 | 350 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017320 | Msa1205760 | 0.801548 | 8.548231e-49 | -8.615850e-47 |
| Msa0084430 | Msa1205760 | 0.819665 | 1.030975e-52 | -8.615850e-47 |
| Msa0090390 | Msa1205760 | 0.801548 | 8.547396e-49 | -8.615850e-47 |
| Msa0630950 | Msa1205760 | 0.830478 | 2.872088e-55 | -8.615850e-47 |
| Msa0709160 | Msa1205760 | 0.802846 | 4.620938e-49 | -8.615850e-47 |
| Msa0233370 | Msa1205760 | 0.815332 | 9.762079e-52 | -8.615850e-47 |
| Msa0376910 | Msa1205760 | 0.801482 | 8.816891e-49 | -8.615850e-47 |
| Msa0387050 | Msa1205760 | 0.809090 | 2.247270e-50 | -8.615850e-47 |
| Msa0471900 | Msa1205760 | 0.806368 | 8.510034e-50 | -8.615850e-47 |
| Msa0990580 | Msa1205760 | 0.816900 | 4.357048e-52 | -8.615850e-47 |
| Msa0994370 | Msa1205760 | 0.801389 | 9.214615e-49 | -8.615850e-47 |
| Msa1042660 | Msa1205760 | 0.806257 | 8.980703e-50 | -8.615850e-47 |
| Msa1077070 | Msa1205760 | 0.803763 | 2.984315e-49 | -8.615850e-47 |
| Msa0262370 | Msa1205760 | 0.803461 | 3.448106e-49 | -8.615850e-47 |
| Msa0304840 | Msa1205760 | 0.822751 | 2.002993e-53 | -8.615850e-47 |
| Msa0309880 | Msa1205760 | 0.807034 | 6.155914e-50 | -8.615850e-47 |
| Msa0311720 | Msa1205760 | 0.813912 | 2.012850e-51 | -8.615850e-47 |
| Msa0337060 | Msa1205760 | 0.807862 | 4.107971e-50 | -8.615850e-47 |
| Msa0341230 | Msa1205760 | 0.824047 | 9.970757e-54 | -8.615850e-47 |
| Msa1122780 | Msa1205760 | 0.801502 | 8.735233e-49 | -8.615850e-47 |
| Msa1163870 | Msa1205760 | 0.800779 | 1.227776e-48 | -8.615850e-47 |
| Msa1205760 | Msa1205800 | 0.848887 | 4.601574e-60 | -8.615850e-47 |
| Msa1205760 | Msa1270660 | 0.822066 | 2.890380e-53 | -8.615850e-47 |
| Msa1205760 | Msa1270730 | 0.850572 | 1.557539e-60 | -8.615850e-47 |
| Msa1205760 | Msa1295930 | 0.806366 | 8.519616e-50 | -8.615850e-47 |
| Msa1205760 | Msa1443610 | 0.804654 | 1.947511e-49 | -8.615850e-47 |
| Msa0534410 | Msa1205760 | 0.824558 | 7.563340e-54 | -8.615850e-47 |
| Msa0590650 | Msa1205760 | 0.835372 | 1.743815e-56 | -8.615850e-47 |
| Msa0872440 | Msa1205760 | 0.816573 | 5.157571e-52 | -8.615850e-47 |
| Msa0945120 | Msa1205760 | 0.809302 | 2.023379e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205760 | MtrunA17_Chr4g0055041 | 96.471 | 340 | 11 | 1 | 38 | 376 | 17 | 356 | 0.0 | 657 |
| Msa1205760 | MtrunA17_Chr2g0283381 | 65.373 | 335 | 112 | 2 | 41 | 375 | 27 | 357 | 1.67e-153 | 437 |
| Msa1205760 | MtrunA17_Chr7g0249781 | 56.845 | 336 | 135 | 4 | 41 | 375 | 15 | 341 | 6.08e-127 | 369 |
| Msa1205760 | MtrunA17_Chr3g0102091 | 52.469 | 324 | 150 | 2 | 54 | 376 | 45 | 365 | 3.72e-114 | 338 |
| Msa1205760 | MtrunA17_Chr3g0132551 | 31.897 | 348 | 222 | 5 | 39 | 376 | 2 | 344 | 6.32e-54 | 182 |
| Msa1205760 | MtrunA17_Chr5g0426921 | 34.740 | 308 | 193 | 3 | 74 | 376 | 38 | 342 | 3.18e-53 | 180 |
| Msa1205760 | MtrunA17_Chr6g0483671 | 51.678 | 149 | 72 | 0 | 228 | 376 | 3 | 151 | 3.94e-50 | 166 |
| Msa1205760 | MtrunA17_Chr8g0346091 | 30.746 | 335 | 211 | 3 | 48 | 377 | 45 | 363 | 1.18e-47 | 166 |
| Msa1205760 | MtrunA17_Chr2g0296491 | 29.500 | 400 | 245 | 7 | 1 | 379 | 1 | 384 | 1.65e-44 | 158 |
| Msa1205760 | MtrunA17_Chr3g0132561 | 26.934 | 349 | 204 | 6 | 38 | 376 | 2 | 309 | 1.99e-40 | 145 |
| Msa1205760 | MtrunA17_Chr2g0296481 | 34.539 | 304 | 178 | 7 | 77 | 374 | 72 | 360 | 1.31e-37 | 139 |
| Msa1205760 | MtrunA17_Chr2g0313931 | 42.286 | 175 | 92 | 4 | 28 | 202 | 5 | 170 | 6.06e-32 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205760 | AT4G18220.1 | 51.695 | 354 | 160 | 2 | 27 | 376 | 12 | 358 | 8.63e-119 | 350 |
| Msa1205760 | AT4G18210.1 | 53.107 | 354 | 153 | 4 | 28 | 376 | 13 | 358 | 1.89e-118 | 349 |
| Msa1205760 | AT1G44750.6 | 53.049 | 328 | 146 | 1 | 48 | 375 | 24 | 343 | 3.93e-113 | 335 |
| Msa1205760 | AT1G44750.2 | 53.049 | 328 | 146 | 1 | 48 | 375 | 24 | 343 | 3.93e-113 | 335 |
| Msa1205760 | AT1G44750.1 | 53.049 | 328 | 146 | 1 | 48 | 375 | 36 | 355 | 4.28e-113 | 335 |
| Msa1205760 | AT4G18195.1 | 49.568 | 347 | 163 | 3 | 36 | 376 | 21 | 361 | 2.77e-98 | 298 |
| Msa1205760 | AT4G18190.1 | 49.275 | 345 | 161 | 3 | 41 | 376 | 16 | 355 | 3.08e-98 | 297 |
| Msa1205760 | AT4G18205.1 | 47.353 | 340 | 172 | 2 | 38 | 376 | 22 | 355 | 2.53e-97 | 295 |
| Msa1205760 | AT4G08700.1 | 46.628 | 341 | 169 | 3 | 36 | 375 | 16 | 344 | 3.88e-97 | 294 |
| Msa1205760 | AT1G44750.7 | 59.091 | 242 | 99 | 0 | 134 | 375 | 38 | 279 | 9.14e-96 | 288 |
| Msa1205760 | AT1G44750.5 | 59.091 | 242 | 99 | 0 | 134 | 375 | 38 | 279 | 9.14e-96 | 288 |
| Msa1205760 | AT1G44750.4 | 59.091 | 242 | 99 | 0 | 134 | 375 | 38 | 279 | 9.14e-96 | 288 |
| Msa1205760 | AT1G44750.8 | 59.091 | 242 | 99 | 0 | 134 | 375 | 38 | 279 | 9.14e-96 | 288 |
| Msa1205760 | AT1G44750.3 | 59.091 | 242 | 99 | 0 | 134 | 375 | 38 | 279 | 9.14e-96 | 288 |
| Msa1205760 | AT4G18197.1 | 47.006 | 334 | 167 | 3 | 44 | 376 | 34 | 358 | 1.61e-95 | 290 |
| Msa1205760 | AT5G41160.1 | 45.480 | 354 | 174 | 5 | 24 | 375 | 11 | 347 | 1.05e-91 | 280 |
| Msa1205760 | AT2G33750.2 | 37.224 | 317 | 190 | 2 | 63 | 376 | 13 | 323 | 7.48e-66 | 213 |
| Msa1205760 | AT1G28220.1 | 34.700 | 317 | 198 | 4 | 63 | 376 | 11 | 321 | 8.46e-66 | 213 |
| Msa1205760 | AT2G33750.1 | 35.976 | 328 | 190 | 3 | 63 | 376 | 13 | 334 | 1.58e-62 | 204 |
| Msa1205760 | AT1G28230.1 | 38.486 | 317 | 183 | 5 | 68 | 376 | 16 | 328 | 2.63e-60 | 199 |
| Msa1205760 | AT1G57990.1 | 31.117 | 376 | 219 | 8 | 19 | 374 | 13 | 368 | 1.19e-45 | 161 |
| Msa1205760 | AT1G57980.1 | 32.708 | 373 | 205 | 8 | 25 | 374 | 23 | 372 | 1.22e-44 | 159 |
| Msa1205760 | AT1G57943.1 | 30.749 | 387 | 217 | 11 | 27 | 374 | 2 | 376 | 4.79e-43 | 154 |
| Msa1205760 | AT1G57943.2 | 31.135 | 379 | 215 | 11 | 30 | 374 | 9 | 375 | 5.43e-43 | 154 |
| Msa1205760 | AT1G09860.1 | 32.464 | 345 | 195 | 10 | 28 | 350 | 5 | 333 | 1.61e-37 | 139 |
| Msa1205760 | AT1G30840.2 | 31.921 | 354 | 216 | 7 | 27 | 374 | 2 | 336 | 4.53e-36 | 135 |
| Msa1205760 | AT1G30840.1 | 31.921 | 354 | 216 | 7 | 27 | 374 | 2 | 336 | 4.53e-36 | 135 |
| Msa1205760 | AT2G24220.1 | 28.933 | 356 | 232 | 3 | 18 | 369 | 2 | 340 | 6.05e-34 | 129 |
| Msa1205760 | AT2G24220.2 | 28.933 | 356 | 232 | 3 | 18 | 369 | 20 | 358 | 8.21e-34 | 129 |
| Msa1205760 | AT1G47603.1 | 27.577 | 388 | 239 | 10 | 12 | 374 | 3 | 373 | 6.46e-31 | 122 |
| Msa1205760 | AT1G19770.1 | 29.697 | 330 | 206 | 6 | 68 | 375 | 59 | 384 | 1.23e-30 | 121 |
| Msa1205760 | AT1G75470.1 | 31.390 | 223 | 140 | 4 | 164 | 374 | 151 | 372 | 1.45e-22 | 98.6 |
Find 78 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGCGCGTTCTGCCGTTTC+TGG | 0.140435 | 8_1:-62228455 | Msa1205760:CDS |
| GAAACAATGATTGAAAATTT+TGG | 0.160525 | 8_1:+62227439 | None:intergenic |
| TAGCCTTAATGTTAGCAATA+TGG | 0.213802 | 8_1:-62226745 | Msa1205760:CDS |
| CGCGAGCTGCGACCTTGATC+TGG | 0.217913 | 8_1:+62228240 | None:intergenic |
| GCTACCTGTGCTTGTGTTGC+TGG | 0.238139 | 8_1:-62227016 | Msa1205760:CDS |
| GATATTTATGTTGGTAGATT+TGG | 0.246168 | 8_1:+62227489 | None:intergenic |
| CCAAGTACTCGCTTATCTTT+AGG | 0.253149 | 8_1:+62227172 | None:intergenic |
| ACAAAGGTGGTAATAGTAAA+TGG | 0.269720 | 8_1:-62227582 | Msa1205760:CDS |
| TCAATCTACAGTCAATCTTT+TGG | 0.277474 | 8_1:-62227620 | Msa1205760:CDS |
| CATATATAATGACTTTGTTT+TGG | 0.282504 | 8_1:-62226925 | Msa1205760:CDS |
| TCATTGTTCTCAAATGTAAT+AGG | 0.283074 | 8_1:-62226842 | Msa1205760:CDS |
| GTATCTTCCATTGGTATGTT+AGG | 0.292638 | 8_1:-62226884 | Msa1205760:CDS |
| AGCCTTAATGTTAGCAATAT+GGG | 0.317391 | 8_1:-62226744 | Msa1205760:CDS |
| ATATGAATGCTGTGAACTTT+TGG | 0.321106 | 8_1:+62227272 | None:intergenic |
| TCCCCATATTGCTAACATTA+AGG | 0.322350 | 8_1:+62226742 | None:intergenic |
| TGTTGATTGTTGATAAATAT+AGG | 0.338678 | 8_1:+62226712 | None:intergenic |
| TCTCTACATAGTATTTCTTT+TGG | 0.340663 | 8_1:-62227647 | Msa1205760:CDS |
| GGAGATGAAGGAATATGAAC+TGG | 0.366582 | 8_1:-62226957 | Msa1205760:CDS |
| GCAACATTTGTTCAATCAGC+TGG | 0.388372 | 8_1:-62227556 | Msa1205760:CDS |
| CCTAAAGATAAGCGAGTACT+TGG | 0.390852 | 8_1:-62227172 | Msa1205760:CDS |
| CTCGCGTGGGTGGGGAAAGC+AGG | 0.399154 | 8_1:-62228223 | Msa1205760:intron |
| AGAATGGAAAAGTTTGAATA+AGG | 0.399319 | 8_1:-62226978 | Msa1205760:CDS |
| AATAAAGTGGAAGTAGTATA+GGG | 0.402136 | 8_1:+62227530 | None:intergenic |
| AAATAAAGTGGAAGTAGTAT+AGG | 0.409995 | 8_1:+62227529 | None:intergenic |
| ATCAATATTGATATTTATGT+TGG | 0.410871 | 8_1:+62227480 | None:intergenic |
| GCACAGGTAGCGACGAAAGA+AGG | 0.414481 | 8_1:+62227028 | None:intergenic |
| GTCCTCAGAATCGTTATTGA+TGG | 0.418883 | 8_1:+62227207 | None:intergenic |
| GGTCGCAGCTCGCGTGGGTG+GGG | 0.419751 | 8_1:-62228231 | Msa1205760:CDS |
| GTAAGAAAATACTGCATTGA+AGG | 0.434994 | 8_1:+62227306 | None:intergenic |
| CTTGGATTCGTCTTCACCCT+TGG | 0.444186 | 8_1:-62227154 | Msa1205760:CDS |
| CTACCTGTGCTTGTGTTGCT+GGG | 0.449265 | 8_1:-62227015 | Msa1205760:CDS |
| AAGGTCGCAGCTCGCGTGGG+TGG | 0.456217 | 8_1:-62228233 | Msa1205760:CDS |
| AAAGATTAAGAGATTTCAAA+TGG | 0.470365 | 8_1:-62227684 | Msa1205760:CDS |
| TCTCTTAATCTTTGATGTTG+AGG | 0.470898 | 8_1:+62227694 | None:intergenic |
| TCTTCCATGACAAAATCAAC+GGG | 0.471038 | 8_1:-62226778 | Msa1205760:CDS |
| TTCAGCTGAGAATGGAAGAA+AGG | 0.471255 | 8_1:-62228482 | None:intergenic |
| GAAGAAAATAACAGCAAGGA+TGG | 0.477070 | 8_1:+62226796 | None:intergenic |
| GGTTGTTTGCAAGTGGAGAA+TGG | 0.482806 | 8_1:-62226994 | Msa1205760:CDS |
| CAACCCAGCAACACAAGCAC+AGG | 0.491864 | 8_1:+62227012 | None:intergenic |
| GATCAAGGTCGCAGCTCGCG+TGG | 0.492472 | 8_1:-62228237 | Msa1205760:CDS |
| AGGTCGCAGCTCGCGTGGGT+GGG | 0.497320 | 8_1:-62228232 | Msa1205760:CDS |
| CTCGATCCTGACCAAACAAA+TGG | 0.499191 | 8_1:-62228273 | Msa1205760:CDS |
| CATGTCCAAGATAACAGAAA+AGG | 0.503363 | 8_1:+62227060 | None:intergenic |
| TGTTGCACATAGTAAAGAAT+AGG | 0.504800 | 8_1:+62227336 | None:intergenic |
| ATCGTTATTGATGGCAAGTA+GGG | 0.507986 | 8_1:+62227216 | None:intergenic |
| AAGTTTGAATAAGGAGATGA+AGG | 0.509849 | 8_1:-62226969 | Msa1205760:CDS |
| TCAGCTGAGAATGGAAGAAA+GGG | 0.516284 | 8_1:-62228481 | None:intergenic |
| GCGAGCTGCGACCTTGATCT+GGG | 0.519786 | 8_1:+62228241 | None:intergenic |
| TGAAAGATATAGAAGTCCAT+TGG | 0.520330 | 8_1:+62227366 | None:intergenic |
| ACAGCAAGGATGGGACCTAC+AGG | 0.527733 | 8_1:+62226806 | None:intergenic |
| TTCTTCCATGACAAAATCAA+CGG | 0.528604 | 8_1:-62226779 | Msa1205760:CDS |
| CACAGGTAGCGACGAAAGAA+GGG | 0.536717 | 8_1:+62227029 | None:intergenic |
| GACAATTTGATGTATTCCAA+TGG | 0.539300 | 8_1:-62227382 | Msa1205760:CDS |
| AATCGTTATTGATGGCAAGT+AGG | 0.540072 | 8_1:+62227215 | None:intergenic |
| AACTAATCCTAACATACCAA+TGG | 0.561168 | 8_1:+62226877 | None:intergenic |
| ACATGGCAAGTATCTTCCAT+TGG | 0.573996 | 8_1:-62226893 | Msa1205760:CDS |
| TGTCAAAAGAAAGCTGCACA+AGG | 0.574825 | 8_1:+62227101 | None:intergenic |
| ATGTTGGTAGATTTGGCATG+TGG | 0.579676 | 8_1:+62227496 | None:intergenic |
| GATTAAGAGATTTCAAATGG+TGG | 0.581181 | 8_1:-62227681 | Msa1205760:CDS |
| AGGTGGTAATAGTAAATGGA+TGG | 0.581435 | 8_1:-62227578 | Msa1205760:CDS |
| GGTGTGAAGATAAAATAAAG+TGG | 0.582110 | 8_1:+62227517 | None:intergenic |
| GTTGCTGGGTTGTTTGCAAG+TGG | 0.582152 | 8_1:-62227001 | Msa1205760:CDS |
| TGCCATCAATAACGATTCTG+AGG | 0.582388 | 8_1:-62227209 | Msa1205760:CDS |
| GAAGGAATATGAACTGGGAA+AGG | 0.585101 | 8_1:-62226951 | Msa1205760:CDS |
| GCCTTAATGTTAGCAATATG+GGG | 0.590818 | 8_1:-62226743 | Msa1205760:CDS |
| TGCACATAGTAAAGAATAGG+TGG | 0.594060 | 8_1:+62227339 | None:intergenic |
| GGAAGACTATATTATGACAA+AGG | 0.601712 | 8_1:-62227598 | Msa1205760:CDS |
| GAGATGAAGGAATATGAACT+GGG | 0.604093 | 8_1:-62226956 | Msa1205760:CDS |
| AAATGTAACAGATGCACCAA+GGG | 0.607913 | 8_1:+62227138 | None:intergenic |
| ATCAAGGTCGCAGCTCGCGT+GGG | 0.608956 | 8_1:-62228236 | Msa1205760:CDS |
| AAGAAAATAACAGCAAGGAT+GGG | 0.616093 | 8_1:+62226797 | None:intergenic |
| CATGGAAGAAAATAACAGCA+AGG | 0.631020 | 8_1:+62226792 | None:intergenic |
| CTCAAATGTAATAGGTACAG+TGG | 0.634079 | 8_1:-62226834 | Msa1205760:CDS |
| GGTACAGTGGTACTTCCTGT+AGG | 0.644346 | 8_1:-62226821 | Msa1205760:CDS |
| AGACTATATTATGACAAAGG+TGG | 0.646613 | 8_1:-62227595 | Msa1205760:CDS |
| AAAATGTAACAGATGCACCA+AGG | 0.653920 | 8_1:+62227137 | None:intergenic |
| GTCAAAAGAAAGCTGCACAA+GGG | 0.669271 | 8_1:+62227102 | None:intergenic |
| CTTCCATGACAAAATCAACG+GGG | 0.691412 | 8_1:-62226777 | Msa1205760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTGATTTTTAAGTTATTT+TGG | + | chr8_1:62227096-62227115 | None:intergenic | 10.0% |
| !!! | AATTGATTTTTAAGTTATTT+TGG | + | chr8_1:62227096-62227115 | None:intergenic | 10.0% |
| !!! | GTCATTTAATTAAGTTATTT+TGG | + | chr8_1:62227032-62227051 | None:intergenic | 15.0% |
| !! | ATCAATATTGATATTTATGT+TGG | + | chr8_1:62227694-62227713 | None:intergenic | 15.0% |
| !!! | GTCATTTAATTAAGTTATTT+TGG | + | chr8_1:62227032-62227051 | None:intergenic | 15.0% |
| !! | ATCAATATTGATATTTATGT+TGG | + | chr8_1:62227694-62227713 | None:intergenic | 15.0% |
| !! | AGAAATTCATAACAAGAAAT+GGG | + | chr8_1:62227437-62227456 | None:intergenic | 20.0% |
| !! | AAAGATTAAGAGATTTCAAA+TGG | - | chr8_1:62227487-62227506 | Msa1205760:CDS | 20.0% |
| !!! | AAATTTTGGTTTGGTTTTTT+TGG | + | chr8_1:62227721-62227740 | None:intergenic | 20.0% |
| !!! | AATGATTGAAAATTTTGGTT+TGG | + | chr8_1:62227730-62227749 | None:intergenic | 20.0% |
| !!! | GAAACAATGATTGAAAATTT+TGG | + | chr8_1:62227735-62227754 | None:intergenic | 20.0% |
| !!! | GTTTCTCTTTACATATTTTT+TGG | - | chr8_1:62227750-62227769 | Msa1205760:intron | 20.0% |
| !!! | CATATATAATGACTTTGTTT+TGG | - | chr8_1:62228246-62228265 | Msa1205760:CDS | 20.0% |
| !!! | TGTTGATTGTTGATAAATAT+AGG | + | chr8_1:62228462-62228481 | None:intergenic | 20.0% |
| !! | AGAAATTCATAACAAGAAAT+GGG | + | chr8_1:62227437-62227456 | None:intergenic | 20.0% |
| !! | AAAGATTAAGAGATTTCAAA+TGG | - | chr8_1:62227487-62227506 | Msa1205760:CDS | 20.0% |
| !!! | AAATTTTGGTTTGGTTTTTT+TGG | + | chr8_1:62227721-62227740 | None:intergenic | 20.0% |
| !!! | AATGATTGAAAATTTTGGTT+TGG | + | chr8_1:62227730-62227749 | None:intergenic | 20.0% |
| !!! | GAAACAATGATTGAAAATTT+TGG | + | chr8_1:62227735-62227754 | None:intergenic | 20.0% |
| !!! | GTTTCTCTTTACATATTTTT+TGG | - | chr8_1:62227750-62227769 | Msa1205760:intron | 20.0% |
| !!! | CATATATAATGACTTTGTTT+TGG | - | chr8_1:62228246-62228265 | Msa1205760:CDS | 20.0% |
| !!! | TGTTGATTGTTGATAAATAT+AGG | + | chr8_1:62228462-62228481 | None:intergenic | 20.0% |
| ! | GTAAGAGAAAGAATGAAAAT+CGG | - | chr8_1:62226761-62226780 | Msa1205760:CDS | 25.0% |
| ! | TAAGAGAAAGAATGAAAATC+GGG | - | chr8_1:62226762-62226781 | Msa1205760:CDS | 25.0% |
| ! | GGTTCCATATATAATAGTTA+TGG | + | chr8_1:62226788-62226807 | None:intergenic | 25.0% |
| ! | TAACTATTATATATGGAACC+AGG | - | chr8_1:62226788-62226807 | Msa1205760:CDS | 25.0% |
| ! | TTTAGACTAAATTACATCAG+AGG | + | chr8_1:62227143-62227162 | None:intergenic | 25.0% |
| !!! | AAGAACTACATTTGATTTTG+CGG | - | chr8_1:62227274-62227293 | Msa1205760:CDS | 25.0% |
| ! | GAGAAATTCATAACAAGAAA+TGG | + | chr8_1:62227438-62227457 | None:intergenic | 25.0% |
| !! | TCTCTACATAGTATTTCTTT+TGG | - | chr8_1:62227524-62227543 | Msa1205760:CDS | 25.0% |
| !! | TACATAGTATTTCTTTTGGT+AGG | - | chr8_1:62227528-62227547 | Msa1205760:CDS | 25.0% |
| ! | AATAAAGTGGAAGTAGTATA+GGG | + | chr8_1:62227644-62227663 | None:intergenic | 25.0% |
| ! | AAATAAAGTGGAAGTAGTAT+AGG | + | chr8_1:62227645-62227664 | None:intergenic | 25.0% |
| !! | GATATTTATGTTGGTAGATT+TGG | + | chr8_1:62227685-62227704 | None:intergenic | 25.0% |
| ! | AGAATGGAAAAGTTTGAATA+AGG | - | chr8_1:62228193-62228212 | Msa1205760:intron | 25.0% |
| ! | TCATTGTTCTCAAATGTAAT+AGG | - | chr8_1:62228329-62228348 | Msa1205760:intron | 25.0% |
| ! | GTAAGAGAAAGAATGAAAAT+CGG | - | chr8_1:62226761-62226780 | Msa1205760:CDS | 25.0% |
| ! | TAAGAGAAAGAATGAAAATC+GGG | - | chr8_1:62226762-62226781 | Msa1205760:CDS | 25.0% |
| ! | GGTTCCATATATAATAGTTA+TGG | + | chr8_1:62226788-62226807 | None:intergenic | 25.0% |
| ! | TAACTATTATATATGGAACC+AGG | - | chr8_1:62226788-62226807 | Msa1205760:CDS | 25.0% |
| ! | TTTAGACTAAATTACATCAG+AGG | + | chr8_1:62227143-62227162 | None:intergenic | 25.0% |
| !!! | AAGAACTACATTTGATTTTG+CGG | - | chr8_1:62227274-62227293 | Msa1205760:CDS | 25.0% |
| ! | GAGAAATTCATAACAAGAAA+TGG | + | chr8_1:62227438-62227457 | None:intergenic | 25.0% |
| !! | TCTCTACATAGTATTTCTTT+TGG | - | chr8_1:62227524-62227543 | Msa1205760:CDS | 25.0% |
| !! | TACATAGTATTTCTTTTGGT+AGG | - | chr8_1:62227528-62227547 | Msa1205760:CDS | 25.0% |
| ! | AATAAAGTGGAAGTAGTATA+GGG | + | chr8_1:62227644-62227663 | None:intergenic | 25.0% |
| ! | AAATAAAGTGGAAGTAGTAT+AGG | + | chr8_1:62227645-62227664 | None:intergenic | 25.0% |
| !! | GATATTTATGTTGGTAGATT+TGG | + | chr8_1:62227685-62227704 | None:intergenic | 25.0% |
| ! | AGAATGGAAAAGTTTGAATA+AGG | - | chr8_1:62228193-62228212 | Msa1205760:intron | 25.0% |
| ! | TCATTGTTCTCAAATGTAAT+AGG | - | chr8_1:62228329-62228348 | Msa1205760:intron | 25.0% |
| ACATAAGCAAAAAACGAGTT+GGG | + | chr8_1:62226864-62226883 | None:intergenic | 30.0% | |
| AACATAAGCAAAAAACGAGT+TGG | + | chr8_1:62226865-62226884 | None:intergenic | 30.0% | |
| GTTACAAACCTCACATTTAA+AGG | - | chr8_1:62227058-62227077 | Msa1205760:CDS | 30.0% | |
| ACATAAGTCCTTTAAATGTG+AGG | + | chr8_1:62227069-62227088 | None:intergenic | 30.0% | |
| ! | TCAGAGGTCATTTAAGTTTA+AGG | + | chr8_1:62227127-62227146 | None:intergenic | 30.0% |
| ATTCTATTTGTCTGCATTTG+TGG | + | chr8_1:62227173-62227192 | None:intergenic | 30.0% | |
| ! | TCTTGTTATGAATTTCTCAG+AGG | - | chr8_1:62227440-62227459 | Msa1205760:CDS | 30.0% |
| TCTCTTAATCTTTGATGTTG+AGG | + | chr8_1:62227480-62227499 | None:intergenic | 30.0% | |
| GATTAAGAGATTTCAAATGG+TGG | - | chr8_1:62227490-62227509 | Msa1205760:CDS | 30.0% | |
| ! | TCAATCTACAGTCAATCTTT+TGG | - | chr8_1:62227551-62227570 | Msa1205760:CDS | 30.0% |
| ! | CAATCTACAGTCAATCTTTT+GGG | - | chr8_1:62227552-62227571 | Msa1205760:CDS | 30.0% |
| GGAAGACTATATTATGACAA+AGG | - | chr8_1:62227573-62227592 | Msa1205760:CDS | 30.0% | |
| AGACTATATTATGACAAAGG+TGG | - | chr8_1:62227576-62227595 | Msa1205760:CDS | 30.0% | |
| ACAAAGGTGGTAATAGTAAA+TGG | - | chr8_1:62227589-62227608 | Msa1205760:CDS | 30.0% | |
| GGTGTGAAGATAAAATAAAG+TGG | + | chr8_1:62227657-62227676 | None:intergenic | 30.0% | |
| !!! | TTTTGGTTTGGTTTTTTTGG+AGG | + | chr8_1:62227718-62227737 | None:intergenic | 30.0% |
| !!! | TTTTTTGGCTTACTTTTAGC+AGG | - | chr8_1:62227765-62227784 | Msa1205760:intron | 30.0% |
| !!! | TTTTTGGCTTACTTTTAGCA+GGG | - | chr8_1:62227766-62227785 | Msa1205760:intron | 30.0% |
| GACAATTTGATGTATTCCAA+TGG | - | chr8_1:62227789-62227808 | Msa1205760:intron | 30.0% | |
| TGAAAGATATAGAAGTCCAT+TGG | + | chr8_1:62227808-62227827 | None:intergenic | 30.0% | |
| TGTTGCACATAGTAAAGAAT+AGG | + | chr8_1:62227838-62227857 | None:intergenic | 30.0% | |
| GTAAGAAAATACTGCATTGA+AGG | + | chr8_1:62227868-62227887 | None:intergenic | 30.0% | |
| ! | TATGAATGCTGTGAACTTTT+GGG | + | chr8_1:62227901-62227920 | None:intergenic | 30.0% |
| ! | ATATGAATGCTGTGAACTTT+TGG | + | chr8_1:62227902-62227921 | None:intergenic | 30.0% |
| ! | TGAAACCTTTTCTGTTATCT+TGG | - | chr8_1:62228106-62228125 | Msa1205760:intron | 30.0% |
| AAGTTTGAATAAGGAGATGA+AGG | - | chr8_1:62228202-62228221 | Msa1205760:intron | 30.0% | |
| AACTAATCCTAACATACCAA+TGG | + | chr8_1:62228297-62228316 | None:intergenic | 30.0% | |
| AAGAAAATAACAGCAAGGAT+GGG | + | chr8_1:62228377-62228396 | None:intergenic | 30.0% | |
| TTCTTCCATGACAAAATCAA+CGG | - | chr8_1:62228392-62228411 | Msa1205760:intron | 30.0% | |
| ! | TAGCCTTAATGTTAGCAATA+TGG | - | chr8_1:62228426-62228445 | Msa1205760:intron | 30.0% |
| AGCCTTAATGTTAGCAATAT+GGG | - | chr8_1:62228427-62228446 | Msa1205760:intron | 30.0% | |
| ACATAAGCAAAAAACGAGTT+GGG | + | chr8_1:62226864-62226883 | None:intergenic | 30.0% | |
| AACATAAGCAAAAAACGAGT+TGG | + | chr8_1:62226865-62226884 | None:intergenic | 30.0% | |
| GTTACAAACCTCACATTTAA+AGG | - | chr8_1:62227058-62227077 | Msa1205760:CDS | 30.0% | |
| ACATAAGTCCTTTAAATGTG+AGG | + | chr8_1:62227069-62227088 | None:intergenic | 30.0% | |
| ! | TCAGAGGTCATTTAAGTTTA+AGG | + | chr8_1:62227127-62227146 | None:intergenic | 30.0% |
| ATTCTATTTGTCTGCATTTG+TGG | + | chr8_1:62227173-62227192 | None:intergenic | 30.0% | |
| ! | TCTTGTTATGAATTTCTCAG+AGG | - | chr8_1:62227440-62227459 | Msa1205760:CDS | 30.0% |
| TCTCTTAATCTTTGATGTTG+AGG | + | chr8_1:62227480-62227499 | None:intergenic | 30.0% | |
| GATTAAGAGATTTCAAATGG+TGG | - | chr8_1:62227490-62227509 | Msa1205760:CDS | 30.0% | |
| ! | TCAATCTACAGTCAATCTTT+TGG | - | chr8_1:62227551-62227570 | Msa1205760:CDS | 30.0% |
| ! | CAATCTACAGTCAATCTTTT+GGG | - | chr8_1:62227552-62227571 | Msa1205760:CDS | 30.0% |
| GGAAGACTATATTATGACAA+AGG | - | chr8_1:62227573-62227592 | Msa1205760:CDS | 30.0% | |
| AGACTATATTATGACAAAGG+TGG | - | chr8_1:62227576-62227595 | Msa1205760:CDS | 30.0% | |
| ACAAAGGTGGTAATAGTAAA+TGG | - | chr8_1:62227589-62227608 | Msa1205760:CDS | 30.0% | |
| GGTGTGAAGATAAAATAAAG+TGG | + | chr8_1:62227657-62227676 | None:intergenic | 30.0% | |
| !!! | TTTTGGTTTGGTTTTTTTGG+AGG | + | chr8_1:62227718-62227737 | None:intergenic | 30.0% |
| !!! | TTTTTTGGCTTACTTTTAGC+AGG | - | chr8_1:62227765-62227784 | Msa1205760:intron | 30.0% |
| !!! | TTTTTGGCTTACTTTTAGCA+GGG | - | chr8_1:62227766-62227785 | Msa1205760:intron | 30.0% |
| GACAATTTGATGTATTCCAA+TGG | - | chr8_1:62227789-62227808 | Msa1205760:intron | 30.0% | |
| TGAAAGATATAGAAGTCCAT+TGG | + | chr8_1:62227808-62227827 | None:intergenic | 30.0% | |
| TGTTGCACATAGTAAAGAAT+AGG | + | chr8_1:62227838-62227857 | None:intergenic | 30.0% | |
| GTAAGAAAATACTGCATTGA+AGG | + | chr8_1:62227868-62227887 | None:intergenic | 30.0% | |
| ! | TATGAATGCTGTGAACTTTT+GGG | + | chr8_1:62227901-62227920 | None:intergenic | 30.0% |
| ! | ATATGAATGCTGTGAACTTT+TGG | + | chr8_1:62227902-62227921 | None:intergenic | 30.0% |
| ! | TGAAACCTTTTCTGTTATCT+TGG | - | chr8_1:62228106-62228125 | Msa1205760:intron | 30.0% |
| AAGTTTGAATAAGGAGATGA+AGG | - | chr8_1:62228202-62228221 | Msa1205760:intron | 30.0% | |
| AACTAATCCTAACATACCAA+TGG | + | chr8_1:62228297-62228316 | None:intergenic | 30.0% | |
| AAGAAAATAACAGCAAGGAT+GGG | + | chr8_1:62228377-62228396 | None:intergenic | 30.0% | |
| TTCTTCCATGACAAAATCAA+CGG | - | chr8_1:62228392-62228411 | Msa1205760:intron | 30.0% | |
| ! | TAGCCTTAATGTTAGCAATA+TGG | - | chr8_1:62228426-62228445 | Msa1205760:intron | 30.0% |
| AGCCTTAATGTTAGCAATAT+GGG | - | chr8_1:62228427-62228446 | Msa1205760:intron | 30.0% | |
| CGGGCCATAACTATTATATA+TGG | - | chr8_1:62226781-62226800 | Msa1205760:CDS | 35.0% | |
| GTCACGTTGAAATTAAAACC+TGG | + | chr8_1:62226809-62226828 | None:intergenic | 35.0% | |
| !!! | GTTTTAATTTCAACGTGACC+CGG | - | chr8_1:62226810-62226829 | Msa1205760:CDS | 35.0% |
| ! | GGGCTGATAAAAATTGGTTT+GGG | + | chr8_1:62226844-62226863 | None:intergenic | 35.0% |
| TGGGCTGATAAAAATTGGTT+TGG | + | chr8_1:62226845-62226864 | None:intergenic | 35.0% | |
| ! | TTTGCTTATGTTTCTGCTAC+AGG | - | chr8_1:62226873-62226892 | Msa1205760:CDS | 35.0% |
| !! | TTTTTGCCATTTGTTTGGTC+AGG | + | chr8_1:62226907-62226926 | None:intergenic | 35.0% |
| ATGTGAGGTTTGTAACAGAT+TGG | + | chr8_1:62227054-62227073 | None:intergenic | 35.0% | |
| GAACGAGTGAAAGATTATCA+CGG | + | chr8_1:62227252-62227271 | None:intergenic | 35.0% | |
| ! | GTTTCTTTACTCTTTTGAGC+CGG | - | chr8_1:62227364-62227383 | Msa1205760:CDS | 35.0% |
| !! | GATTTGTTAGAACACCAATC+CGG | + | chr8_1:62227386-62227405 | None:intergenic | 35.0% |
| AGGTGGTAATAGTAAATGGA+TGG | - | chr8_1:62227593-62227612 | Msa1205760:CDS | 35.0% | |
| !!! | TTTTGGCTTACTTTTAGCAG+GGG | - | chr8_1:62227767-62227786 | Msa1205760:intron | 35.0% |
| TGCACATAGTAAAGAATAGG+TGG | + | chr8_1:62227835-62227854 | None:intergenic | 35.0% | |
| ! | ATCGTTATTGATGGCAAGTA+GGG | + | chr8_1:62227958-62227977 | None:intergenic | 35.0% |
| ! | AATCGTTATTGATGGCAAGT+AGG | + | chr8_1:62227959-62227978 | None:intergenic | 35.0% |
| AAATGTAACAGATGCACCAA+GGG | + | chr8_1:62228036-62228055 | None:intergenic | 35.0% | |
| AAAATGTAACAGATGCACCA+AGG | + | chr8_1:62228037-62228056 | None:intergenic | 35.0% | |
| CATGTCCAAGATAACAGAAA+AGG | + | chr8_1:62228114-62228133 | None:intergenic | 35.0% | |
| GAGATGAAGGAATATGAACT+GGG | - | chr8_1:62228215-62228234 | Msa1205760:intron | 35.0% | |
| GTATCTTCCATTGGTATGTT+AGG | - | chr8_1:62228287-62228306 | Msa1205760:intron | 35.0% | |
| CTCAAATGTAATAGGTACAG+TGG | - | chr8_1:62228337-62228356 | Msa1205760:intron | 35.0% | |
| GAAGAAAATAACAGCAAGGA+TGG | + | chr8_1:62228378-62228397 | None:intergenic | 35.0% | |
| CATGGAAGAAAATAACAGCA+AGG | + | chr8_1:62228382-62228401 | None:intergenic | 35.0% | |
| TCTTCCATGACAAAATCAAC+GGG | - | chr8_1:62228393-62228412 | Msa1205760:intron | 35.0% | |
| GCCTTAATGTTAGCAATATG+GGG | - | chr8_1:62228428-62228447 | Msa1205760:intron | 35.0% | |
| TCCCCATATTGCTAACATTA+AGG | + | chr8_1:62228432-62228451 | None:intergenic | 35.0% | |
| CGGGCCATAACTATTATATA+TGG | - | chr8_1:62226781-62226800 | Msa1205760:CDS | 35.0% | |
| GTCACGTTGAAATTAAAACC+TGG | + | chr8_1:62226809-62226828 | None:intergenic | 35.0% | |
| !!! | GTTTTAATTTCAACGTGACC+CGG | - | chr8_1:62226810-62226829 | Msa1205760:CDS | 35.0% |
| ! | GGGCTGATAAAAATTGGTTT+GGG | + | chr8_1:62226844-62226863 | None:intergenic | 35.0% |
| TGGGCTGATAAAAATTGGTT+TGG | + | chr8_1:62226845-62226864 | None:intergenic | 35.0% | |
| ! | TTTGCTTATGTTTCTGCTAC+AGG | - | chr8_1:62226873-62226892 | Msa1205760:CDS | 35.0% |
| !! | TTTTTGCCATTTGTTTGGTC+AGG | + | chr8_1:62226907-62226926 | None:intergenic | 35.0% |
| ATGTGAGGTTTGTAACAGAT+TGG | + | chr8_1:62227054-62227073 | None:intergenic | 35.0% | |
| GAACGAGTGAAAGATTATCA+CGG | + | chr8_1:62227252-62227271 | None:intergenic | 35.0% | |
| ! | GTTTCTTTACTCTTTTGAGC+CGG | - | chr8_1:62227364-62227383 | Msa1205760:CDS | 35.0% |
| !! | GATTTGTTAGAACACCAATC+CGG | + | chr8_1:62227386-62227405 | None:intergenic | 35.0% |
| AGGTGGTAATAGTAAATGGA+TGG | - | chr8_1:62227593-62227612 | Msa1205760:CDS | 35.0% | |
| !!! | TTTTGGCTTACTTTTAGCAG+GGG | - | chr8_1:62227767-62227786 | Msa1205760:intron | 35.0% |
| TGCACATAGTAAAGAATAGG+TGG | + | chr8_1:62227835-62227854 | None:intergenic | 35.0% | |
| ! | ATCGTTATTGATGGCAAGTA+GGG | + | chr8_1:62227958-62227977 | None:intergenic | 35.0% |
| ! | AATCGTTATTGATGGCAAGT+AGG | + | chr8_1:62227959-62227978 | None:intergenic | 35.0% |
| AAATGTAACAGATGCACCAA+GGG | + | chr8_1:62228036-62228055 | None:intergenic | 35.0% | |
| AAAATGTAACAGATGCACCA+AGG | + | chr8_1:62228037-62228056 | None:intergenic | 35.0% | |
| CATGTCCAAGATAACAGAAA+AGG | + | chr8_1:62228114-62228133 | None:intergenic | 35.0% | |
| GAGATGAAGGAATATGAACT+GGG | - | chr8_1:62228215-62228234 | Msa1205760:intron | 35.0% | |
| GTATCTTCCATTGGTATGTT+AGG | - | chr8_1:62228287-62228306 | Msa1205760:intron | 35.0% | |
| CTCAAATGTAATAGGTACAG+TGG | - | chr8_1:62228337-62228356 | Msa1205760:intron | 35.0% | |
| GAAGAAAATAACAGCAAGGA+TGG | + | chr8_1:62228378-62228397 | None:intergenic | 35.0% | |
| CATGGAAGAAAATAACAGCA+AGG | + | chr8_1:62228382-62228401 | None:intergenic | 35.0% | |
| TCTTCCATGACAAAATCAAC+GGG | - | chr8_1:62228393-62228412 | Msa1205760:intron | 35.0% | |
| GCCTTAATGTTAGCAATATG+GGG | - | chr8_1:62228428-62228447 | Msa1205760:intron | 35.0% | |
| TCCCCATATTGCTAACATTA+AGG | + | chr8_1:62228432-62228451 | None:intergenic | 35.0% | |
| GAAAAACCCTAACCCAGAAA+CGG | + | chr8_1:62226732-62226751 | None:intergenic | 40.0% | |
| ! | GGTTAGGGTTTTTCGTGAAA+GGG | - | chr8_1:62226738-62226757 | Msa1205760:CDS | 40.0% |
| ! | GTTAGGGTTTTTCGTGAAAG+GGG | - | chr8_1:62226739-62226758 | Msa1205760:CDS | 40.0% |
| ! | CGAGTTGGGCTGATAAAAAT+TGG | + | chr8_1:62226850-62226869 | None:intergenic | 40.0% |
| !!! | GGTCGTTTTTGCCATTTGTT+TGG | + | chr8_1:62226912-62226931 | None:intergenic | 40.0% |
| CACACATAAGCAAAATAGCC+AGG | + | chr8_1:62227008-62227027 | None:intergenic | 40.0% | |
| ! | TTTACTCTTTTGAGCCGGAT+TGG | - | chr8_1:62227369-62227388 | Msa1205760:CDS | 40.0% |
| GCAACATTTGTTCAATCAGC+TGG | - | chr8_1:62227615-62227634 | Msa1205760:CDS | 40.0% | |
| ! | ATGTTGGTAGATTTGGCATG+TGG | + | chr8_1:62227678-62227697 | None:intergenic | 40.0% |
| !! | CTGTGAACTTTTGGGAGTTA+AGG | + | chr8_1:62227893-62227912 | None:intergenic | 40.0% |
| TGCCATCAATAACGATTCTG+AGG | - | chr8_1:62227962-62227981 | Msa1205760:intron | 40.0% | |
| GTCCTCAGAATCGTTATTGA+TGG | + | chr8_1:62227967-62227986 | None:intergenic | 40.0% | |
| CCAAGTACTCGCTTATCTTT+AGG | + | chr8_1:62228002-62228021 | None:intergenic | 40.0% | |
| CCTAAAGATAAGCGAGTACT+TGG | - | chr8_1:62227999-62228018 | Msa1205760:intron | 40.0% | |
| GTCAAAAGAAAGCTGCACAA+GGG | + | chr8_1:62228072-62228091 | None:intergenic | 40.0% | |
| TGTCAAAAGAAAGCTGCACA+AGG | + | chr8_1:62228073-62228092 | None:intergenic | 40.0% | |
| GGAGATGAAGGAATATGAAC+TGG | - | chr8_1:62228214-62228233 | Msa1205760:intron | 40.0% | |
| GAAGGAATATGAACTGGGAA+AGG | - | chr8_1:62228220-62228239 | Msa1205760:intron | 40.0% | |
| !! | TGTTTTGGATTGCTGTGACA+TGG | - | chr8_1:62228261-62228280 | Msa1205760:CDS | 40.0% |
| ACATGGCAAGTATCTTCCAT+TGG | - | chr8_1:62228278-62228297 | Msa1205760:CDS | 40.0% | |
| CTTCCATGACAAAATCAACG+GGG | - | chr8_1:62228394-62228413 | Msa1205760:intron | 40.0% | |
| GAAAAACCCTAACCCAGAAA+CGG | + | chr8_1:62226732-62226751 | None:intergenic | 40.0% | |
| ! | GGTTAGGGTTTTTCGTGAAA+GGG | - | chr8_1:62226738-62226757 | Msa1205760:CDS | 40.0% |
| ! | GTTAGGGTTTTTCGTGAAAG+GGG | - | chr8_1:62226739-62226758 | Msa1205760:CDS | 40.0% |
| ! | CGAGTTGGGCTGATAAAAAT+TGG | + | chr8_1:62226850-62226869 | None:intergenic | 40.0% |
| !!! | GGTCGTTTTTGCCATTTGTT+TGG | + | chr8_1:62226912-62226931 | None:intergenic | 40.0% |
| CACACATAAGCAAAATAGCC+AGG | + | chr8_1:62227008-62227027 | None:intergenic | 40.0% | |
| ! | TTTACTCTTTTGAGCCGGAT+TGG | - | chr8_1:62227369-62227388 | Msa1205760:CDS | 40.0% |
| GCAACATTTGTTCAATCAGC+TGG | - | chr8_1:62227615-62227634 | Msa1205760:CDS | 40.0% | |
| ! | ATGTTGGTAGATTTGGCATG+TGG | + | chr8_1:62227678-62227697 | None:intergenic | 40.0% |
| !! | CTGTGAACTTTTGGGAGTTA+AGG | + | chr8_1:62227893-62227912 | None:intergenic | 40.0% |
| TGCCATCAATAACGATTCTG+AGG | - | chr8_1:62227962-62227981 | Msa1205760:intron | 40.0% | |
| GTCCTCAGAATCGTTATTGA+TGG | + | chr8_1:62227967-62227986 | None:intergenic | 40.0% | |
| CCAAGTACTCGCTTATCTTT+AGG | + | chr8_1:62228002-62228021 | None:intergenic | 40.0% | |
| CCTAAAGATAAGCGAGTACT+TGG | - | chr8_1:62227999-62228018 | Msa1205760:intron | 40.0% | |
| GTCAAAAGAAAGCTGCACAA+GGG | + | chr8_1:62228072-62228091 | None:intergenic | 40.0% | |
| TGTCAAAAGAAAGCTGCACA+AGG | + | chr8_1:62228073-62228092 | None:intergenic | 40.0% | |
| GGAGATGAAGGAATATGAAC+TGG | - | chr8_1:62228214-62228233 | Msa1205760:intron | 40.0% | |
| GAAGGAATATGAACTGGGAA+AGG | - | chr8_1:62228220-62228239 | Msa1205760:intron | 40.0% | |
| !! | TGTTTTGGATTGCTGTGACA+TGG | - | chr8_1:62228261-62228280 | Msa1205760:CDS | 40.0% |
| ACATGGCAAGTATCTTCCAT+TGG | - | chr8_1:62228278-62228297 | Msa1205760:CDS | 40.0% | |
| CTTCCATGACAAAATCAACG+GGG | - | chr8_1:62228394-62228413 | Msa1205760:intron | 40.0% | |
| ! | GGGTTAGGGTTTTTCGTGAA+AGG | - | chr8_1:62226737-62226756 | Msa1205760:CDS | 45.0% |
| CTCGATCCTGACCAAACAAA+TGG | - | chr8_1:62226898-62226917 | Msa1205760:CDS | 45.0% | |
| ! | TGATTTTGCGGTCAAAGACG+TGG | - | chr8_1:62227286-62227305 | Msa1205760:CDS | 45.0% |
| GGTTGTTTGCAAGTGGAGAA+TGG | - | chr8_1:62228177-62228196 | Msa1205760:intron | 45.0% | |
| !!! | TCACCCCGTTGATTTTGTCA+TGG | + | chr8_1:62228400-62228419 | None:intergenic | 45.0% |
| ! | GGGTTAGGGTTTTTCGTGAA+AGG | - | chr8_1:62226737-62226756 | Msa1205760:CDS | 45.0% |
| CTCGATCCTGACCAAACAAA+TGG | - | chr8_1:62226898-62226917 | Msa1205760:CDS | 45.0% | |
| ! | TGATTTTGCGGTCAAAGACG+TGG | - | chr8_1:62227286-62227305 | Msa1205760:CDS | 45.0% |
| GGTTGTTTGCAAGTGGAGAA+TGG | - | chr8_1:62228177-62228196 | Msa1205760:intron | 45.0% | |
| !!! | TCACCCCGTTGATTTTGTCA+TGG | + | chr8_1:62228400-62228419 | None:intergenic | 45.0% |
| ! | GTTCTGCCGTTTCTGGGTTA+GGG | - | chr8_1:62226723-62226742 | Msa1205760:CDS | 50.0% |
| !! | ATTGGTTTGGGCTTGCGAAC+CGG | + | chr8_1:62226832-62226851 | None:intergenic | 50.0% |
| GGCAAAAACGACCCAGATCA+AGG | - | chr8_1:62226919-62226938 | Msa1205760:CDS | 50.0% | |
| CTTGGATTCGTCTTCACCCT+TGG | - | chr8_1:62228017-62228036 | Msa1205760:intron | 50.0% | |
| CACAGGTAGCGACGAAAGAA+GGG | + | chr8_1:62228145-62228164 | None:intergenic | 50.0% | |
| ! | CTACCTGTGCTTGTGTTGCT+GGG | - | chr8_1:62228156-62228175 | Msa1205760:intron | 50.0% |
| GTTGCTGGGTTGTTTGCAAG+TGG | - | chr8_1:62228170-62228189 | Msa1205760:intron | 50.0% | |
| GGTACAGTGGTACTTCCTGT+AGG | - | chr8_1:62228350-62228369 | Msa1205760:intron | 50.0% | |
| ! | GTTCTGCCGTTTCTGGGTTA+GGG | - | chr8_1:62226723-62226742 | Msa1205760:CDS | 50.0% |
| !! | ATTGGTTTGGGCTTGCGAAC+CGG | + | chr8_1:62226832-62226851 | None:intergenic | 50.0% |
| GGCAAAAACGACCCAGATCA+AGG | - | chr8_1:62226919-62226938 | Msa1205760:CDS | 50.0% | |
| CTTGGATTCGTCTTCACCCT+TGG | - | chr8_1:62228017-62228036 | Msa1205760:intron | 50.0% | |
| CACAGGTAGCGACGAAAGAA+GGG | + | chr8_1:62228145-62228164 | None:intergenic | 50.0% | |
| ! | CTACCTGTGCTTGTGTTGCT+GGG | - | chr8_1:62228156-62228175 | Msa1205760:intron | 50.0% |
| GTTGCTGGGTTGTTTGCAAG+TGG | - | chr8_1:62228170-62228189 | Msa1205760:intron | 50.0% | |
| GGTACAGTGGTACTTCCTGT+AGG | - | chr8_1:62228350-62228369 | Msa1205760:intron | 50.0% | |
| ! | CGTTCTGCCGTTTCTGGGTT+AGG | - | chr8_1:62226722-62226741 | Msa1205760:CDS | 55.0% |
| !! | TTGGTTTGGGCTTGCGAACC+GGG | + | chr8_1:62226831-62226850 | None:intergenic | 55.0% |
| ATCGTGCGATCCTACGAGCT+GGG | - | chr8_1:62226975-62226994 | Msa1205760:CDS | 55.0% | |
| AGGATTGAGTCCCAGCTCGT+AGG | + | chr8_1:62226988-62227007 | None:intergenic | 55.0% | |
| TACGAGCTGGGACTCAATCC+TGG | - | chr8_1:62226987-62227006 | Msa1205760:CDS | 55.0% | |
| GCACAGGTAGCGACGAAAGA+AGG | + | chr8_1:62228146-62228165 | None:intergenic | 55.0% | |
| GCTACCTGTGCTTGTGTTGC+TGG | - | chr8_1:62228155-62228174 | Msa1205760:intron | 55.0% | |
| CAACCCAGCAACACAAGCAC+AGG | + | chr8_1:62228162-62228181 | None:intergenic | 55.0% | |
| ACAGCAAGGATGGGACCTAC+AGG | + | chr8_1:62228368-62228387 | None:intergenic | 55.0% | |
| ! | CGTTCTGCCGTTTCTGGGTT+AGG | - | chr8_1:62226722-62226741 | Msa1205760:CDS | 55.0% |
| !! | TTGGTTTGGGCTTGCGAACC+GGG | + | chr8_1:62226831-62226850 | None:intergenic | 55.0% |
| ATCGTGCGATCCTACGAGCT+GGG | - | chr8_1:62226975-62226994 | Msa1205760:CDS | 55.0% | |
| AGGATTGAGTCCCAGCTCGT+AGG | + | chr8_1:62226988-62227007 | None:intergenic | 55.0% | |
| TACGAGCTGGGACTCAATCC+TGG | - | chr8_1:62226987-62227006 | Msa1205760:CDS | 55.0% | |
| GCACAGGTAGCGACGAAAGA+AGG | + | chr8_1:62228146-62228165 | None:intergenic | 55.0% | |
| GCTACCTGTGCTTGTGTTGC+TGG | - | chr8_1:62228155-62228174 | Msa1205760:intron | 55.0% | |
| CAACCCAGCAACACAAGCAC+AGG | + | chr8_1:62228162-62228181 | None:intergenic | 55.0% | |
| ACAGCAAGGATGGGACCTAC+AGG | + | chr8_1:62228368-62228387 | None:intergenic | 55.0% | |
| ! | AGAGCGCGTTCTGCCGTTTC+TGG | - | chr8_1:62226716-62226735 | Msa1205760:CDS | 60.0% |
| ! | GAGCGCGTTCTGCCGTTTCT+GGG | - | chr8_1:62226717-62226736 | Msa1205760:CDS | 60.0% |
| GCGAGCTGCGACCTTGATCT+GGG | + | chr8_1:62226933-62226952 | None:intergenic | 60.0% | |
| ATCAAGGTCGCAGCTCGCGT+GGG | - | chr8_1:62226935-62226954 | Msa1205760:CDS | 60.0% | |
| GATCGTGCGATCCTACGAGC+TGG | - | chr8_1:62226974-62226993 | Msa1205760:CDS | 60.0% | |
| ! | AGAGCGCGTTCTGCCGTTTC+TGG | - | chr8_1:62226716-62226735 | Msa1205760:CDS | 60.0% |
| ! | GAGCGCGTTCTGCCGTTTCT+GGG | - | chr8_1:62226717-62226736 | Msa1205760:CDS | 60.0% |
| GCGAGCTGCGACCTTGATCT+GGG | + | chr8_1:62226933-62226952 | None:intergenic | 60.0% | |
| ATCAAGGTCGCAGCTCGCGT+GGG | - | chr8_1:62226935-62226954 | Msa1205760:CDS | 60.0% | |
| GATCGTGCGATCCTACGAGC+TGG | - | chr8_1:62226974-62226993 | Msa1205760:CDS | 60.0% | |
| CGCGAGCTGCGACCTTGATC+TGG | + | chr8_1:62226934-62226953 | None:intergenic | 65.0% | |
| GATCAAGGTCGCAGCTCGCG+TGG | - | chr8_1:62226934-62226953 | Msa1205760:CDS | 65.0% | |
| CGCGAGCTGCGACCTTGATC+TGG | + | chr8_1:62226934-62226953 | None:intergenic | 65.0% | |
| GATCAAGGTCGCAGCTCGCG+TGG | - | chr8_1:62226934-62226953 | Msa1205760:CDS | 65.0% | |
| AAGGTCGCAGCTCGCGTGGG+TGG | - | chr8_1:62226938-62226957 | Msa1205760:CDS | 70.0% | |
| AGGTCGCAGCTCGCGTGGGT+GGG | - | chr8_1:62226939-62226958 | Msa1205760:CDS | 70.0% | |
| CTCGCGTGGGTGGGGAAAGC+AGG | - | chr8_1:62226948-62226967 | Msa1205760:CDS | 70.0% | |
| AAGGTCGCAGCTCGCGTGGG+TGG | - | chr8_1:62226938-62226957 | Msa1205760:CDS | 70.0% | |
| AGGTCGCAGCTCGCGTGGGT+GGG | - | chr8_1:62226939-62226958 | Msa1205760:CDS | 70.0% | |
| CTCGCGTGGGTGGGGAAAGC+AGG | - | chr8_1:62226948-62226967 | Msa1205760:CDS | 70.0% | |
| GGTCGCAGCTCGCGTGGGTG+GGG | - | chr8_1:62226940-62226959 | Msa1205760:CDS | 75.0% | |
| GGTCGCAGCTCGCGTGGGTG+GGG | - | chr8_1:62226940-62226959 | Msa1205760:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 62226700 | 62228493 | 62226700 | ID=Msa1205760;Name=Msa1205760 |
| chr8_1 | mRNA | 62226700 | 62228493 | 62226700 | ID=Msa1205760-mRNA-1;Parent=Msa1205760;Name=Msa1205760-mRNA-1;_AED=0.18;_eAED=0.19;_QI=0|0|0|0.33|1|1|3|0|381 |
| chr8_1 | exon | 62228455 | 62228493 | 62228455 | ID=Msa1205760-mRNA-1:exon:20222;Parent=Msa1205760-mRNA-1 |
| chr8_1 | exon | 62228224 | 62228298 | 62228224 | ID=Msa1205760-mRNA-1:exon:20221;Parent=Msa1205760-mRNA-1 |
| chr8_1 | exon | 62226700 | 62227731 | 62226700 | ID=Msa1205760-mRNA-1:exon:20220;Parent=Msa1205760-mRNA-1 |
| chr8_1 | CDS | 62228455 | 62228493 | 62228455 | ID=Msa1205760-mRNA-1:cds;Parent=Msa1205760-mRNA-1 |
| chr8_1 | CDS | 62228224 | 62228298 | 62228224 | ID=Msa1205760-mRNA-1:cds;Parent=Msa1205760-mRNA-1 |
| chr8_1 | CDS | 62226700 | 62227731 | 62226700 | ID=Msa1205760-mRNA-1:cds;Parent=Msa1205760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
