AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0090390


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0090390 MtrunA17_Chr1g0210291 97.324 598 12 2 1 597 1 595 0.0 1171
Msa0090390 MtrunA17_Chr1g0210274 75.258 582 138 3 11 591 12 588 0.0 879
Msa0090390 MtrunA17_Chr1g0210284 73.630 584 142 3 11 593 12 584 0.0 865
Msa0090390 MtrunA17_Chr7g0264861 63.946 588 197 6 14 591 18 600 0.0 732
Msa0090390 MtrunA17_Chr1g0171591 59.138 580 227 3 12 584 11 587 0.0 679
Msa0090390 MtrunA17_Chr1g0174101 56.228 578 240 3 12 585 11 579 0.0 652
Msa0090390 MtrunA17_Chr2g0330551 34.159 565 321 7 22 566 4 537 1.39e-104 326
Msa0090390 MtrunA17_Chr7g0225191 35.395 582 335 11 11 557 1 576 5.72e-102 321
Msa0090390 MtrunA17_Chr5g0442481 32.849 551 334 5 25 567 11 533 1.39e-97 308
Msa0090390 MtrunA17_Chr3g0132161 34.650 557 324 12 25 558 15 554 2.22e-92 295
Msa0090390 MtrunA17_Chr4g0037301 33.215 563 304 10 25 558 15 534 4.54e-87 281
Msa0090390 MtrunA17_Chr5g0405621 31.455 550 338 8 25 569 13 528 4.93e-81 265
Msa0090390 MtrunA17_Chr4g0064981 30.228 569 340 12 26 558 12 559 1.65e-74 248
Msa0090390 MtrunA17_Chr2g0304561 30.411 559 345 10 26 558 13 553 2.33e-74 248
Msa0090390 MtrunA17_Chr2g0333371 33.624 229 109 5 330 558 104 289 2.73e-32 126
Msa0090390 MtrunA17_Chr7g0251871 25.397 567 388 14 25 569 7 560 1.25e-28 120
Msa0090390 MtrunA17_Chr3g0106801 26.654 544 358 13 22 558 4 513 8.82e-27 114
Msa0090390 MtrunA17_Chr5g0408921 25.739 575 378 15 25 566 7 565 9.72e-25 108
Msa0090390 MtrunA17_Chr8g0369621 23.881 603 406 17 7 572 27 613 2.21e-20 95.1
Msa0090390 MtrunA17_Chr3g0106821 27.415 383 250 10 23 398 5 366 2.91e-19 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0090390 AT2G39210.1 67.986 556 176 2 15 568 11 566 0.0 776
Msa0090390 AT2G28120.1 59.792 577 228 2 12 587 4 577 0.0 692
Msa0090390 AT1G74780.1 36.380 569 307 9 19 568 1 533 2.92e-110 341
Msa0090390 AT5G14120.1 34.589 584 347 8 12 567 3 579 5.83e-102 321
Msa0090390 AT1G18940.1 34.358 553 309 7 20 558 4 516 1.93e-101 318
Msa0090390 AT2G34355.1 34.698 562 309 10 19 564 1 520 2.42e-97 307
Msa0090390 AT3G01930.2 33.107 589 350 9 14 567 5 584 2.92e-97 309
Msa0090390 AT5G50630.1 34.489 548 319 9 21 557 12 530 9.30e-97 306
Msa0090390 AT5G50520.1 34.489 548 319 9 21 557 12 530 9.30e-97 306
Msa0090390 AT4G34950.1 33.979 568 341 8 25 576 16 565 1.10e-95 304
Msa0090390 AT2G34350.1 34.107 560 305 7 25 564 7 522 1.24e-95 303
Msa0090390 AT2G34350.2 34.107 560 305 7 25 564 7 522 1.24e-95 303
Msa0090390 AT2G16660.1 35.009 537 324 6 25 557 14 529 5.92e-91 291
Msa0090390 AT3G01930.1 31.875 480 283 9 123 567 1 471 9.11e-69 231
Msa0090390 AT1G80530.1 28.909 550 355 10 26 558 14 544 2.61e-67 229
Msa0090390 AT3G01930.3 32.723 437 253 7 14 415 5 435 1.38e-63 216
Msa0090390 AT2G34355.2 33.090 411 225 8 162 564 2 370 7.71e-60 204
Msa0090390 AT2G16660.2 34.536 388 238 5 25 408 14 389 2.52e-59 203
Msa0090390 AT3G01630.2 23.732 552 373 13 25 558 41 562 1.41e-27 117
Msa0090390 AT3G01630.1 23.732 552 373 13 25 558 23 544 1.47e-27 117
Msa0090390 AT4G19450.1 25.314 557 338 16 25 533 7 533 8.29e-25 109
Msa0090390 AT1G31470.1 22.456 570 394 13 25 579 43 579 8.15e-24 106
Msa0090390 AT2G30300.1 25.853 557 322 18 26 558 8 497 4.38e-21 97.4
Msa0090390 AT4G19450.2 25.962 416 254 10 25 401 7 407 1.06e-20 95.5
Msa0090390 AT5G45275.1 30.688 189 128 2 25 212 7 193 1.03e-16 84.0

Find 101 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCCTCTCTTGCCGTCATTT+TGG 0.200061 1_2:-72379932 None:intergenic
TTGTTTCATTAGTGAGTATT+TGG 0.206900 1_2:+72379340 Msa0090390:CDS
GGTTCCCTTCTTAATTTCTT+TGG 0.239197 1_2:+72378472 Msa0090390:CDS
AAAAGGAGTACAAAGAAAAT+TGG 0.243039 1_2:+72379713 Msa0090390:CDS
ATTGATAATTTAGGTCAAAT+TGG 0.249106 1_2:+72379279 Msa0090390:CDS
TCTTTGGTTACTTCATGATA+TGG 0.251877 1_2:+72378488 Msa0090390:CDS
ACCAAACAACTCCGAAATTA+TGG 0.265190 1_2:-72379568 None:intergenic
TTAACAGCAATTGATAATTT+AGG 0.275096 1_2:+72379270 Msa0090390:CDS
ATCACTGCAGCTACTTTGTT+TGG 0.283099 1_2:+72379789 Msa0090390:CDS
ATAAGCAAAATCAAAGCTTT+TGG 0.288180 1_2:-72378733 None:intergenic
AAGAGGCAATTGATTGAAAA+AGG 0.294262 1_2:+72379696 Msa0090390:CDS
TTTCTAATCATGTCAGCTTC+AGG 0.321020 1_2:+72378283 Msa0090390:CDS
CAACACAACACCACGAGTTT+CGG 0.323314 1_2:-72378635 None:intergenic
CCTTATGTTGTTCTTGCAAT+TGG 0.327850 1_2:+72378451 Msa0090390:CDS
AACACAACACCACGAGTTTC+GGG 0.327978 1_2:-72378634 None:intergenic
AGACACATTTGCCAAACTTT+TGG 0.333591 1_2:-72378538 None:intergenic
GTAAAATCTTCACCTTGTTC+AGG 0.335258 1_2:-72379174 None:intergenic
ATGTGTCTTTACATTTGTAT+AGG 0.337463 1_2:+72378553 Msa0090390:CDS
AAAGGTTATGTTGGTCTTAG+TGG 0.349558 1_2:+72378667 Msa0090390:CDS
ATGTTATTGCTATTCTTTGC+TGG 0.355922 1_2:+72379225 Msa0090390:CDS
GTTAAGAGTTGTTTGGTCAT+AGG 0.356138 1_2:-72378356 None:intergenic
CACTAAAATAAGTGAAATAA+TGG 0.361527 1_2:-72379814 None:intergenic
AAATACCAAAACCAAAAGTT+TGG 0.367844 1_2:+72378527 Msa0090390:CDS
TATATTTCACTTGGTCTAGC+TGG 0.381529 1_2:+72378859 Msa0090390:CDS
GCCATAATTTCGGAGTTGTT+TGG 0.394992 1_2:+72379567 Msa0090390:CDS
ATAGCCTTTGATGTGCAAAA+TGG 0.396133 1_2:+72379483 Msa0090390:CDS
TTTCTTAATGTTAGGGTCGC+TGG 0.402287 1_2:+72379651 Msa0090390:CDS
TATTCAACTTTGATGAACTT+TGG 0.405251 1_2:+72379600 Msa0090390:CDS
TCAGGAGCCACCTACATGTT+TGG 0.407429 1_2:+72378301 Msa0090390:CDS
GAAACTCGTGGTGTTGTGTT+GGG 0.407607 1_2:+72378637 Msa0090390:CDS
ATAACATATCTATGCTGAAA+AGG 0.416968 1_2:-72379209 None:intergenic
CTTAGTTTCTTCAAAGACTT+AGG 0.418305 1_2:+72378382 Msa0090390:CDS
TTTAAACAGAGTGAGTATAT+TGG 0.420191 1_2:+72378922 Msa0090390:CDS
AGTTCGTTGTTCTGTTTAAC+CGG 0.420863 1_2:-72378814 None:intergenic
GGTGGGGTAGCTAGTCCAAT+TGG 0.428284 1_2:+72379621 Msa0090390:CDS
ACCATCGTCCTGTGATAACT+TGG 0.430124 1_2:-72378243 None:intergenic
TAAGGAGGTTAAGAGTTGTT+TGG 0.437311 1_2:-72378363 None:intergenic
TTAAGAAAATATAATCCAAT+TGG 0.438575 1_2:-72379636 None:intergenic
GGACAGGAAGCAAAAGCTAC+AGG 0.443209 1_2:+72379951 Msa0090390:CDS
AAAGGAGTACAAAGAAAATT+GGG 0.445150 1_2:+72379714 Msa0090390:CDS
CTAAGTCTTTGAAGAAACTA+AGG 0.454900 1_2:-72378381 None:intergenic
GGTCAAATTGGAACCTCACT+TGG 0.457053 1_2:+72379291 Msa0090390:CDS
CTGTGATAACTTGGACTATG+AGG 0.462020 1_2:-72378234 None:intergenic
CAACTTTGATGAACTTTGGT+GGG 0.470861 1_2:+72379604 Msa0090390:CDS
TAACATATCTATGCTGAAAA+GGG 0.471235 1_2:-72379208 None:intergenic
TTGTTTGAGATAACCTCAAC+GGG 0.472230 1_2:-72378207 None:intergenic
TTTGCTGGTACATGTGGTGT+TGG 0.472904 1_2:+72379240 Msa0090390:CDS
AAAAGAAAGGAAATTGCTGC+TGG 0.480135 1_2:-72378766 None:intergenic
TCAGAGCAGGTTGAAGTTGA+AGG 0.480550 1_2:+72379885 Msa0090390:CDS
CGAAACTCGTGGTGTTGTGT+TGG 0.492392 1_2:+72378636 Msa0090390:CDS
GCTGGTACATGTGGTGTTGG+TGG 0.500330 1_2:+72379243 Msa0090390:CDS
GACACCAAAATGGCGGTTGA+AGG 0.501902 1_2:+72378178 None:intergenic
TATATGACAAAGAAGCTAAG+AGG 0.509800 1_2:+72379679 Msa0090390:CDS
AGTTGTTTGGTCATAGGCTA+AGG 0.514651 1_2:-72378350 None:intergenic
AACCATTCGATACATGAAAC+CGG 0.515497 1_2:+72378795 Msa0090390:CDS
CTATTCTTTGCTGGTACATG+TGG 0.516615 1_2:+72379234 Msa0090390:CDS
AACCGGTTTCATGTATCGAA+TGG 0.520822 1_2:-72378797 None:intergenic
AGTACAAAGAAAATTGGGTC+AGG 0.524550 1_2:+72379719 Msa0090390:CDS
CCAATTGCAAGAACAACATA+AGG 0.528707 1_2:-72378451 None:intergenic
AGTAACCAAAGAAATTAAGA+AGG 0.528849 1_2:-72378477 None:intergenic
GTTAAACAGAACAACGAACT+TGG 0.531720 1_2:+72378817 Msa0090390:CDS
TCAACTTTGATGAACTTTGG+TGG 0.540207 1_2:+72379603 Msa0090390:CDS
TACATGTTTGGTCTTTACTC+CGG 0.541203 1_2:+72378313 Msa0090390:CDS
TGATTACTGAAGCAAAATAG+AGG 0.545938 1_2:-72379506 None:intergenic
AAAGACTTAGGTGGCAACCT+TGG 0.554717 1_2:+72378394 Msa0090390:CDS
AAATGACGGCAAGAGAGGAC+AGG 0.559480 1_2:+72379935 Msa0090390:CDS
GTGAGTATTTGGAATTACCT+AGG 0.563575 1_2:+72379351 Msa0090390:CDS
AAACTCGTGGTGTTGTGTTG+GGG 0.568454 1_2:+72378638 Msa0090390:CDS
TATCACAGGACGATGGTTCG+TGG 0.571165 1_2:+72378249 Msa0090390:CDS
GTCCAAAATGACGGCAAGAG+AGG 0.575323 1_2:+72379930 Msa0090390:CDS
CAAGAGGTACCGATCAGAGC+AGG 0.579521 1_2:+72379872 Msa0090390:CDS
AGGAGCTACGGCTGAGATGA+CGG 0.582623 1_2:+72379905 Msa0090390:CDS
AGTTTCTTCAAAGACTTAGG+TGG 0.582691 1_2:+72378385 Msa0090390:CDS
AACTTTGATGAACTTTGGTG+GGG 0.586311 1_2:+72379605 Msa0090390:CDS
AAATCTTCACCTTGTTCAGG+TGG 0.587569 1_2:-72379171 None:intergenic
AAGAATTTCCCCGAAACTCG+TGG 0.589952 1_2:+72378625 Msa0090390:CDS
CTCATAGTCCAAGTTATCAC+AGG 0.590987 1_2:+72378235 Msa0090390:CDS
AAATTGTGATACTAATGCAA+TGG 0.591899 1_2:+72379098 Msa0090390:CDS
CAACTTCAACCTGCTCTGAT+CGG 0.592162 1_2:-72379881 None:intergenic
ATGACGGTGGTCCAAAATGA+CGG 0.592384 1_2:+72379921 Msa0090390:CDS
GGTTGAAGTTGAAGGAGCTA+CGG 0.593890 1_2:+72379893 Msa0090390:CDS
AATGTGAACATGAGTGGTCG+TGG 0.597649 1_2:-72379426 None:intergenic
CAAAGACAACAGCAAGAGGT+AGG 0.598117 1_2:-72378975 None:intergenic
GGTCAGGAATTGAATTGTGT+AGG 0.604873 1_2:+72379735 Msa0090390:CDS
TATCAATAAGTGACCGACAC+AGG 0.607344 1_2:-72379463 None:intergenic
TCAACAAAGACAACAGCAAG+AGG 0.609098 1_2:-72378979 None:intergenic
GACAGGAAGCAAAAGCTACA+GGG 0.610641 1_2:+72379952 Msa0090390:CDS
TTTGTTTGAGATAACCTCAA+CGG 0.614309 1_2:-72378208 None:intergenic
GTAACCAAAGAAATTAAGAA+GGG 0.616373 1_2:-72378476 None:intergenic
TTGAAGGTGTAAGCCCGTTG+AGG 0.620655 1_2:+72378194 Msa0090390:CDS
AGTCTTTGAAGAAACTAAGG+AGG 0.622224 1_2:-72378378 None:intergenic
ATAATCAATGTGAACATGAG+TGG 0.627737 1_2:-72379432 None:intergenic
AAAGAAAGGAAATTGCTGCT+GGG 0.629241 1_2:-72378765 None:intergenic
GGAGTAAAGACCAAACATGT+AGG 0.637378 1_2:-72378311 None:intergenic
ATAAAGGTGATATATACAAG+AGG 0.658630 1_2:+72379856 Msa0090390:CDS
ACACAACACCACGAGTTTCG+GGG 0.681069 1_2:-72378633 None:intergenic
GTAAAGACCAAACATGTAGG+TGG 0.688543 1_2:-72378308 None:intergenic
ATTGCAAGAACAACATAAGG+CGG 0.705972 1_2:-72378448 None:intergenic
TCCAAGTTATCACAGGACGA+TGG 0.708132 1_2:+72378242 Msa0090390:CDS
AGCTACGGCTGAGATGACGG+TGG 0.773314 1_2:+72379908 Msa0090390:CDS
TTAAGCCAGAGAAAACACCA+AGG 0.797705 1_2:-72378411 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATATTTTCTTAATGTTA+GGG + chr1_2:72379644-72379663 Msa0090390:CDS 10.0%
!!! ATTATATTTTCTTAATGTTA+GGG + chr1_2:72379644-72379663 Msa0090390:CDS 10.0%
!! TTAAGAAAATATAATCCAAT+TGG - chr1_2:72379639-72379658 None:intergenic 15.0%
!!! GATTATATTTTCTTAATGTT+AGG + chr1_2:72379643-72379662 Msa0090390:CDS 15.0%
!!! AGAACAATTAAGTTTTATAA+AGG + chr1_2:72379840-72379859 Msa0090390:CDS 15.0%
!! TTAAGAAAATATAATCCAAT+TGG - chr1_2:72379639-72379658 None:intergenic 15.0%
!!! GATTATATTTTCTTAATGTT+AGG + chr1_2:72379643-72379662 Msa0090390:CDS 15.0%
!!! AGAACAATTAAGTTTTATAA+AGG + chr1_2:72379840-72379859 Msa0090390:CDS 15.0%
!!! AAGTTTTTGTATATTTCACT+TGG + chr1_2:72378850-72378869 Msa0090390:CDS 20.0%
!!! TTAACAGCAATTGATAATTT+AGG + chr1_2:72379270-72379289 Msa0090390:CDS 20.0%
!!! ATTGATAATTTAGGTCAAAT+TGG + chr1_2:72379279-72379298 Msa0090390:CDS 20.0%
!! CACTAAAATAAGTGAAATAA+TGG - chr1_2:72379817-72379836 None:intergenic 20.0%
!!! CATTATTTCACTTATTTTAG+TGG + chr1_2:72379815-72379834 Msa0090390:CDS 20.0%
!!! AAGTTTTTGTATATTTCACT+TGG + chr1_2:72378850-72378869 Msa0090390:CDS 20.0%
!!! TTAACAGCAATTGATAATTT+AGG + chr1_2:72379270-72379289 Msa0090390:CDS 20.0%
!!! ATTGATAATTTAGGTCAAAT+TGG + chr1_2:72379279-72379298 Msa0090390:CDS 20.0%
!! CACTAAAATAAGTGAAATAA+TGG - chr1_2:72379817-72379836 None:intergenic 20.0%
!!! CATTATTTCACTTATTTTAG+TGG + chr1_2:72379815-72379834 Msa0090390:CDS 20.0%
! GTAACCAAAGAAATTAAGAA+GGG - chr1_2:72378479-72378498 None:intergenic 25.0%
! AGTAACCAAAGAAATTAAGA+AGG - chr1_2:72378480-72378499 None:intergenic 25.0%
! AAATACCAAAACCAAAAGTT+TGG + chr1_2:72378527-72378546 Msa0090390:CDS 25.0%
! ATGTGTCTTTACATTTGTAT+AGG + chr1_2:72378553-72378572 Msa0090390:CDS 25.0%
!! ATAAGCAAAATCAAAGCTTT+TGG - chr1_2:72378736-72378755 None:intergenic 25.0%
! AATGGTTCGAATAAAAAGAA+AGG - chr1_2:72378782-72378801 None:intergenic 25.0%
! TTTAAACAGAGTGAGTATAT+TGG + chr1_2:72378922-72378941 Msa0090390:CDS 25.0%
!!! GTTACTATTTTAACCGAAAA+TGG - chr1_2:72379048-72379067 None:intergenic 25.0%
! AAATTGTGATACTAATGCAA+TGG + chr1_2:72379098-72379117 Msa0090390:CDS 25.0%
! TTGAACAAAAAGAAACTAGA+TGG + chr1_2:72379130-72379149 Msa0090390:CDS 25.0%
! TAACATATCTATGCTGAAAA+GGG - chr1_2:72379211-72379230 None:intergenic 25.0%
! ATAACATATCTATGCTGAAA+AGG - chr1_2:72379212-72379231 None:intergenic 25.0%
! TTGTTTCATTAGTGAGTATT+TGG + chr1_2:72379340-72379359 Msa0090390:CDS 25.0%
!!! ATTATGTTTTTATCCTGTGT+CGG + chr1_2:72379450-72379469 Msa0090390:CDS 25.0%
!! TATTTTGCTTCAGTAATCAT+TGG + chr1_2:72379510-72379529 Msa0090390:CDS 25.0%
!!! GTAATCATTGGATTTTGTTT+TGG + chr1_2:72379522-72379541 Msa0090390:CDS 25.0%
!!! ATTGGTTTTTGCCATAATTT+CGG + chr1_2:72379557-72379576 Msa0090390:CDS 25.0%
! TATTCAACTTTGATGAACTT+TGG + chr1_2:72379600-72379619 Msa0090390:CDS 25.0%
!! AAAAGGAGTACAAAGAAAAT+TGG + chr1_2:72379713-72379732 Msa0090390:CDS 25.0%
!! AAAGGAGTACAAAGAAAATT+GGG + chr1_2:72379714-72379733 Msa0090390:CDS 25.0%
! ATAAAGGTGATATATACAAG+AGG + chr1_2:72379856-72379875 Msa0090390:CDS 25.0%
! GTAACCAAAGAAATTAAGAA+GGG - chr1_2:72378479-72378498 None:intergenic 25.0%
! AGTAACCAAAGAAATTAAGA+AGG - chr1_2:72378480-72378499 None:intergenic 25.0%
! AAATACCAAAACCAAAAGTT+TGG + chr1_2:72378527-72378546 Msa0090390:CDS 25.0%
! ATGTGTCTTTACATTTGTAT+AGG + chr1_2:72378553-72378572 Msa0090390:CDS 25.0%
!! ATAAGCAAAATCAAAGCTTT+TGG - chr1_2:72378736-72378755 None:intergenic 25.0%
! AATGGTTCGAATAAAAAGAA+AGG - chr1_2:72378782-72378801 None:intergenic 25.0%
! TTTAAACAGAGTGAGTATAT+TGG + chr1_2:72378922-72378941 Msa0090390:CDS 25.0%
!!! GTTACTATTTTAACCGAAAA+TGG - chr1_2:72379048-72379067 None:intergenic 25.0%
! AAATTGTGATACTAATGCAA+TGG + chr1_2:72379098-72379117 Msa0090390:CDS 25.0%
! TTGAACAAAAAGAAACTAGA+TGG + chr1_2:72379130-72379149 Msa0090390:CDS 25.0%
! TAACATATCTATGCTGAAAA+GGG - chr1_2:72379211-72379230 None:intergenic 25.0%
! ATAACATATCTATGCTGAAA+AGG - chr1_2:72379212-72379231 None:intergenic 25.0%
! TTGTTTCATTAGTGAGTATT+TGG + chr1_2:72379340-72379359 Msa0090390:CDS 25.0%
!!! ATTATGTTTTTATCCTGTGT+CGG + chr1_2:72379450-72379469 Msa0090390:CDS 25.0%
!! TATTTTGCTTCAGTAATCAT+TGG + chr1_2:72379510-72379529 Msa0090390:CDS 25.0%
!!! GTAATCATTGGATTTTGTTT+TGG + chr1_2:72379522-72379541 Msa0090390:CDS 25.0%
!!! ATTGGTTTTTGCCATAATTT+CGG + chr1_2:72379557-72379576 Msa0090390:CDS 25.0%
! TATTCAACTTTGATGAACTT+TGG + chr1_2:72379600-72379619 Msa0090390:CDS 25.0%
!! AAAAGGAGTACAAAGAAAAT+TGG + chr1_2:72379713-72379732 Msa0090390:CDS 25.0%
!! AAAGGAGTACAAAGAAAATT+GGG + chr1_2:72379714-72379733 Msa0090390:CDS 25.0%
! ATAAAGGTGATATATACAAG+AGG + chr1_2:72379856-72379875 Msa0090390:CDS 25.0%
! TTTGTTTGAGATAACCTCAA+CGG - chr1_2:72378211-72378230 None:intergenic 30.0%
!! TAAGGATGTTTTTATGGTAC+CGG - chr1_2:72378335-72378354 None:intergenic 30.0%
!! ATAGGCTAAGGATGTTTTTA+TGG - chr1_2:72378341-72378360 None:intergenic 30.0%
! CTAAGTCTTTGAAGAAACTA+AGG - chr1_2:72378384-72378403 None:intergenic 30.0%
CTTAGTTTCTTCAAAGACTT+AGG + chr1_2:72378382-72378401 Msa0090390:CDS 30.0%
TCTTTGGTTACTTCATGATA+TGG + chr1_2:72378488-72378507 Msa0090390:CDS 30.0%
!!! ATTTGCCAAACTTTTGGTTT+TGG - chr1_2:72378535-72378554 None:intergenic 30.0%
!! GGGATTTTAAAAGGTTATGT+TGG + chr1_2:72378658-72378677 Msa0090390:CDS 30.0%
!! CTTTGATTTTGCTTATTGCT+TGG + chr1_2:72378740-72378759 Msa0090390:CDS 30.0%
AACAAAAAGAAACTAGATGG+TGG + chr1_2:72379133-72379152 Msa0090390:CDS 30.0%
! ATGTTATTGCTATTCTTTGC+TGG + chr1_2:72379225-72379244 Msa0090390:CDS 30.0%
!! ATGTGCTTATGCTTGTTTTT+GGG - chr1_2:72379320-72379339 None:intergenic 30.0%
!! AATGTGCTTATGCTTGTTTT+TGG - chr1_2:72379321-72379340 None:intergenic 30.0%
ATAATCAATGTGAACATGAG+TGG - chr1_2:72379435-72379454 None:intergenic 30.0%
TGATTACTGAAGCAAAATAG+AGG - chr1_2:72379509-72379528 None:intergenic 30.0%
GAAATTATGGCAAAAACCAA+TGG - chr1_2:72379558-72379577 None:intergenic 30.0%
TATATGACAAAGAAGCTAAG+AGG + chr1_2:72379679-72379698 Msa0090390:CDS 30.0%
AAGAGGCAATTGATTGAAAA+AGG + chr1_2:72379696-72379715 Msa0090390:CDS 30.0%
! TTTGTTTGAGATAACCTCAA+CGG - chr1_2:72378211-72378230 None:intergenic 30.0%
!! TAAGGATGTTTTTATGGTAC+CGG - chr1_2:72378335-72378354 None:intergenic 30.0%
!! ATAGGCTAAGGATGTTTTTA+TGG - chr1_2:72378341-72378360 None:intergenic 30.0%
! CTAAGTCTTTGAAGAAACTA+AGG - chr1_2:72378384-72378403 None:intergenic 30.0%
CTTAGTTTCTTCAAAGACTT+AGG + chr1_2:72378382-72378401 Msa0090390:CDS 30.0%
TCTTTGGTTACTTCATGATA+TGG + chr1_2:72378488-72378507 Msa0090390:CDS 30.0%
!!! ATTTGCCAAACTTTTGGTTT+TGG - chr1_2:72378535-72378554 None:intergenic 30.0%
!! GGGATTTTAAAAGGTTATGT+TGG + chr1_2:72378658-72378677 Msa0090390:CDS 30.0%
!! CTTTGATTTTGCTTATTGCT+TGG + chr1_2:72378740-72378759 Msa0090390:CDS 30.0%
AACAAAAAGAAACTAGATGG+TGG + chr1_2:72379133-72379152 Msa0090390:CDS 30.0%
! ATGTTATTGCTATTCTTTGC+TGG + chr1_2:72379225-72379244 Msa0090390:CDS 30.0%
!! ATGTGCTTATGCTTGTTTTT+GGG - chr1_2:72379320-72379339 None:intergenic 30.0%
!! AATGTGCTTATGCTTGTTTT+TGG - chr1_2:72379321-72379340 None:intergenic 30.0%
ATAATCAATGTGAACATGAG+TGG - chr1_2:72379435-72379454 None:intergenic 30.0%
TGATTACTGAAGCAAAATAG+AGG - chr1_2:72379509-72379528 None:intergenic 30.0%
GAAATTATGGCAAAAACCAA+TGG - chr1_2:72379558-72379577 None:intergenic 30.0%
TATATGACAAAGAAGCTAAG+AGG + chr1_2:72379679-72379698 Msa0090390:CDS 30.0%
AAGAGGCAATTGATTGAAAA+AGG + chr1_2:72379696-72379715 Msa0090390:CDS 30.0%
! TTGTTTGAGATAACCTCAAC+GGG - chr1_2:72378210-72378229 None:intergenic 35.0%
TTTCTAATCATGTCAGCTTC+AGG + chr1_2:72378283-72378302 Msa0090390:CDS 35.0%
! TACATGTTTGGTCTTTACTC+CGG + chr1_2:72378313-72378332 Msa0090390:CDS 35.0%
GTTAAGAGTTGTTTGGTCAT+AGG - chr1_2:72378359-72378378 None:intergenic 35.0%
TAAGGAGGTTAAGAGTTGTT+TGG - chr1_2:72378366-72378385 None:intergenic 35.0%
! AGTCTTTGAAGAAACTAAGG+AGG - chr1_2:72378381-72378400 None:intergenic 35.0%
AGTTTCTTCAAAGACTTAGG+TGG + chr1_2:72378385-72378404 Msa0090390:CDS 35.0%
ATTGCAAGAACAACATAAGG+CGG - chr1_2:72378451-72378470 None:intergenic 35.0%
CCAATTGCAAGAACAACATA+AGG - chr1_2:72378454-72378473 None:intergenic 35.0%
CCTTATGTTGTTCTTGCAAT+TGG + chr1_2:72378451-72378470 Msa0090390:CDS 35.0%
GGTTCCCTTCTTAATTTCTT+TGG + chr1_2:72378472-72378491 Msa0090390:CDS 35.0%
! AGACACATTTGCCAAACTTT+TGG - chr1_2:72378541-72378560 None:intergenic 35.0%
!!! TCTCAGTCTTTTTCAAACAC+TGG + chr1_2:72378583-72378602 Msa0090390:CDS 35.0%
! GTTGTGTTGGGGATTTTAAA+AGG + chr1_2:72378649-72378668 Msa0090390:CDS 35.0%
!! AAAGGTTATGTTGGTCTTAG+TGG + chr1_2:72378667-72378686 Msa0090390:CDS 35.0%
AAAGAAAGGAAATTGCTGCT+GGG - chr1_2:72378768-72378787 None:intergenic 35.0%
AAAAGAAAGGAAATTGCTGC+TGG - chr1_2:72378769-72378788 None:intergenic 35.0%
AACCATTCGATACATGAAAC+CGG + chr1_2:72378795-72378814 Msa0090390:CDS 35.0%
AGTTCGTTGTTCTGTTTAAC+CGG - chr1_2:72378817-72378836 None:intergenic 35.0%
GTTAAACAGAACAACGAACT+TGG + chr1_2:72378817-72378836 Msa0090390:CDS 35.0%
TATATTTCACTTGGTCTAGC+TGG + chr1_2:72378859-72378878 Msa0090390:CDS 35.0%
!!! TGGTCTAGCTGGTTTTTTAA+TGG + chr1_2:72378870-72378889 Msa0090390:CDS 35.0%
! TGCATTTGTCGATCCATTTT+CGG + chr1_2:72379032-72379051 Msa0090390:CDS 35.0%
!!! ATTTTTAGTCCACCTGAACA+AGG + chr1_2:72379162-72379181 Msa0090390:CDS 35.0%
GTAAAATCTTCACCTTGTTC+AGG - chr1_2:72379177-72379196 None:intergenic 35.0%
! GTGAGTATTTGGAATTACCT+AGG + chr1_2:72379351-72379370 Msa0090390:CDS 35.0%
!!! TACCTAGGAAGAGTTTTTTC+TGG + chr1_2:72379366-72379385 Msa0090390:CDS 35.0%
AACCAGAAAAAACTCTTCCT+AGG - chr1_2:72379371-72379390 None:intergenic 35.0%
ATAGCCTTTGATGTGCAAAA+TGG + chr1_2:72379483-72379502 Msa0090390:CDS 35.0%
!!! GATTTTGTTTTGGTGCACAA+TGG + chr1_2:72379532-72379551 Msa0090390:CDS 35.0%
ACCAAACAACTCCGAAATTA+TGG - chr1_2:72379571-72379590 None:intergenic 35.0%
TCAACTTTGATGAACTTTGG+TGG + chr1_2:72379603-72379622 Msa0090390:CDS 35.0%
CAACTTTGATGAACTTTGGT+GGG + chr1_2:72379604-72379623 Msa0090390:CDS 35.0%
AACTTTGATGAACTTTGGTG+GGG + chr1_2:72379605-72379624 Msa0090390:CDS 35.0%
AGTACAAAGAAAATTGGGTC+AGG + chr1_2:72379719-72379738 Msa0090390:CDS 35.0%
! TTGTTTGAGATAACCTCAAC+GGG - chr1_2:72378210-72378229 None:intergenic 35.0%
TTTCTAATCATGTCAGCTTC+AGG + chr1_2:72378283-72378302 Msa0090390:CDS 35.0%
! TACATGTTTGGTCTTTACTC+CGG + chr1_2:72378313-72378332 Msa0090390:CDS 35.0%
GTTAAGAGTTGTTTGGTCAT+AGG - chr1_2:72378359-72378378 None:intergenic 35.0%
TAAGGAGGTTAAGAGTTGTT+TGG - chr1_2:72378366-72378385 None:intergenic 35.0%
! AGTCTTTGAAGAAACTAAGG+AGG - chr1_2:72378381-72378400 None:intergenic 35.0%
AGTTTCTTCAAAGACTTAGG+TGG + chr1_2:72378385-72378404 Msa0090390:CDS 35.0%
ATTGCAAGAACAACATAAGG+CGG - chr1_2:72378451-72378470 None:intergenic 35.0%
CCAATTGCAAGAACAACATA+AGG - chr1_2:72378454-72378473 None:intergenic 35.0%
CCTTATGTTGTTCTTGCAAT+TGG + chr1_2:72378451-72378470 Msa0090390:CDS 35.0%
GGTTCCCTTCTTAATTTCTT+TGG + chr1_2:72378472-72378491 Msa0090390:CDS 35.0%
! AGACACATTTGCCAAACTTT+TGG - chr1_2:72378541-72378560 None:intergenic 35.0%
!!! TCTCAGTCTTTTTCAAACAC+TGG + chr1_2:72378583-72378602 Msa0090390:CDS 35.0%
! GTTGTGTTGGGGATTTTAAA+AGG + chr1_2:72378649-72378668 Msa0090390:CDS 35.0%
!! AAAGGTTATGTTGGTCTTAG+TGG + chr1_2:72378667-72378686 Msa0090390:CDS 35.0%
AAAGAAAGGAAATTGCTGCT+GGG - chr1_2:72378768-72378787 None:intergenic 35.0%
AAAAGAAAGGAAATTGCTGC+TGG - chr1_2:72378769-72378788 None:intergenic 35.0%
AACCATTCGATACATGAAAC+CGG + chr1_2:72378795-72378814 Msa0090390:CDS 35.0%
AGTTCGTTGTTCTGTTTAAC+CGG - chr1_2:72378817-72378836 None:intergenic 35.0%
GTTAAACAGAACAACGAACT+TGG + chr1_2:72378817-72378836 Msa0090390:CDS 35.0%
TATATTTCACTTGGTCTAGC+TGG + chr1_2:72378859-72378878 Msa0090390:CDS 35.0%
!!! TGGTCTAGCTGGTTTTTTAA+TGG + chr1_2:72378870-72378889 Msa0090390:CDS 35.0%
! TGCATTTGTCGATCCATTTT+CGG + chr1_2:72379032-72379051 Msa0090390:CDS 35.0%
!!! ATTTTTAGTCCACCTGAACA+AGG + chr1_2:72379162-72379181 Msa0090390:CDS 35.0%
GTAAAATCTTCACCTTGTTC+AGG - chr1_2:72379177-72379196 None:intergenic 35.0%
! GTGAGTATTTGGAATTACCT+AGG + chr1_2:72379351-72379370 Msa0090390:CDS 35.0%
!!! TACCTAGGAAGAGTTTTTTC+TGG + chr1_2:72379366-72379385 Msa0090390:CDS 35.0%
AACCAGAAAAAACTCTTCCT+AGG - chr1_2:72379371-72379390 None:intergenic 35.0%
ATAGCCTTTGATGTGCAAAA+TGG + chr1_2:72379483-72379502 Msa0090390:CDS 35.0%
!!! GATTTTGTTTTGGTGCACAA+TGG + chr1_2:72379532-72379551 Msa0090390:CDS 35.0%
ACCAAACAACTCCGAAATTA+TGG - chr1_2:72379571-72379590 None:intergenic 35.0%
TCAACTTTGATGAACTTTGG+TGG + chr1_2:72379603-72379622 Msa0090390:CDS 35.0%
CAACTTTGATGAACTTTGGT+GGG + chr1_2:72379604-72379623 Msa0090390:CDS 35.0%
AACTTTGATGAACTTTGGTG+GGG + chr1_2:72379605-72379624 Msa0090390:CDS 35.0%
AGTACAAAGAAAATTGGGTC+AGG + chr1_2:72379719-72379738 Msa0090390:CDS 35.0%
CTGTGATAACTTGGACTATG+AGG - chr1_2:72378237-72378256 None:intergenic 40.0%
CTCATAGTCCAAGTTATCAC+AGG + chr1_2:72378235-72378254 Msa0090390:CDS 40.0%
GTAAAGACCAAACATGTAGG+TGG - chr1_2:72378311-72378330 None:intergenic 40.0%
GGAGTAAAGACCAAACATGT+AGG - chr1_2:72378314-72378333 None:intergenic 40.0%
AGTTGTTTGGTCATAGGCTA+AGG - chr1_2:72378353-72378372 None:intergenic 40.0%
TTAAGCCAGAGAAAACACCA+AGG - chr1_2:72378414-72378433 None:intergenic 40.0%
! AACCGGTTTCATGTATCGAA+TGG - chr1_2:72378800-72378819 None:intergenic 40.0%
TCAACAAAGACAACAGCAAG+AGG - chr1_2:72378982-72379001 None:intergenic 40.0%
AAATCTTCACCTTGTTCAGG+TGG - chr1_2:72379174-72379193 None:intergenic 40.0%
CTATTCTTTGCTGGTACATG+TGG + chr1_2:72379234-72379253 Msa0090390:CDS 40.0%
!!! TGTTTTTGGGTATCCAAGTG+AGG - chr1_2:72379307-72379326 None:intergenic 40.0%
TATCAATAAGTGACCGACAC+AGG - chr1_2:72379466-72379485 None:intergenic 40.0%
GCCATAATTTCGGAGTTGTT+TGG + chr1_2:72379567-72379586 Msa0090390:CDS 40.0%
TTTCTTAATGTTAGGGTCGC+TGG + chr1_2:72379651-72379670 Msa0090390:CDS 40.0%
GGTCAGGAATTGAATTGTGT+AGG + chr1_2:72379735-72379754 Msa0090390:CDS 40.0%
! ATCACTGCAGCTACTTTGTT+TGG + chr1_2:72379789-72379808 Msa0090390:CDS 40.0%
CTGTGATAACTTGGACTATG+AGG - chr1_2:72378237-72378256 None:intergenic 40.0%
CTCATAGTCCAAGTTATCAC+AGG + chr1_2:72378235-72378254 Msa0090390:CDS 40.0%
GTAAAGACCAAACATGTAGG+TGG - chr1_2:72378311-72378330 None:intergenic 40.0%
GGAGTAAAGACCAAACATGT+AGG - chr1_2:72378314-72378333 None:intergenic 40.0%
AGTTGTTTGGTCATAGGCTA+AGG - chr1_2:72378353-72378372 None:intergenic 40.0%
TTAAGCCAGAGAAAACACCA+AGG - chr1_2:72378414-72378433 None:intergenic 40.0%
! AACCGGTTTCATGTATCGAA+TGG - chr1_2:72378800-72378819 None:intergenic 40.0%
TCAACAAAGACAACAGCAAG+AGG - chr1_2:72378982-72379001 None:intergenic 40.0%
AAATCTTCACCTTGTTCAGG+TGG - chr1_2:72379174-72379193 None:intergenic 40.0%
CTATTCTTTGCTGGTACATG+TGG + chr1_2:72379234-72379253 Msa0090390:CDS 40.0%
!!! TGTTTTTGGGTATCCAAGTG+AGG - chr1_2:72379307-72379326 None:intergenic 40.0%
TATCAATAAGTGACCGACAC+AGG - chr1_2:72379466-72379485 None:intergenic 40.0%
GCCATAATTTCGGAGTTGTT+TGG + chr1_2:72379567-72379586 Msa0090390:CDS 40.0%
TTTCTTAATGTTAGGGTCGC+TGG + chr1_2:72379651-72379670 Msa0090390:CDS 40.0%
GGTCAGGAATTGAATTGTGT+AGG + chr1_2:72379735-72379754 Msa0090390:CDS 40.0%
! ATCACTGCAGCTACTTTGTT+TGG + chr1_2:72379789-72379808 Msa0090390:CDS 40.0%
TCCAAGTTATCACAGGACGA+TGG + chr1_2:72378242-72378261 Msa0090390:CDS 45.0%
ACCATCGTCCTGTGATAACT+TGG - chr1_2:72378246-72378265 None:intergenic 45.0%
AAAGACTTAGGTGGCAACCT+TGG + chr1_2:72378394-72378413 Msa0090390:CDS 45.0%
AAGAATTTCCCCGAAACTCG+TGG + chr1_2:72378625-72378644 Msa0090390:CDS 45.0%
AACACAACACCACGAGTTTC+GGG - chr1_2:72378637-72378656 None:intergenic 45.0%
CAACACAACACCACGAGTTT+CGG - chr1_2:72378638-72378657 None:intergenic 45.0%
!! GAAACTCGTGGTGTTGTGTT+GGG + chr1_2:72378637-72378656 Msa0090390:CDS 45.0%
!! AAACTCGTGGTGTTGTGTTG+GGG + chr1_2:72378638-72378657 Msa0090390:CDS 45.0%
CAAAGACAACAGCAAGAGGT+AGG - chr1_2:72378978-72378997 None:intergenic 45.0%
TTTGCTGGTACATGTGGTGT+TGG + chr1_2:72379240-72379259 Msa0090390:CDS 45.0%
GGTCAAATTGGAACCTCACT+TGG + chr1_2:72379291-72379310 Msa0090390:CDS 45.0%
AATGTGAACATGAGTGGTCG+TGG - chr1_2:72379429-72379448 None:intergenic 45.0%
!! GAGGCCATTTTGCACATCAA+AGG - chr1_2:72379490-72379509 None:intergenic 45.0%
!! TTTTGGTGCACAATGGCCAT+TGG + chr1_2:72379539-72379558 Msa0090390:CDS 45.0%
CAACTTCAACCTGCTCTGAT+CGG - chr1_2:72379884-72379903 None:intergenic 45.0%
! TCAGAGCAGGTTGAAGTTGA+AGG + chr1_2:72379885-72379904 Msa0090390:CDS 45.0%
GGTTGAAGTTGAAGGAGCTA+CGG + chr1_2:72379893-72379912 Msa0090390:CDS 45.0%
ATGACGGTGGTCCAAAATGA+CGG + chr1_2:72379921-72379940 Msa0090390:CDS 45.0%
GACAGGAAGCAAAAGCTACA+GGG + chr1_2:72379952-72379971 Msa0090390:CDS 45.0%
TCCAAGTTATCACAGGACGA+TGG + chr1_2:72378242-72378261 Msa0090390:CDS 45.0%
ACCATCGTCCTGTGATAACT+TGG - chr1_2:72378246-72378265 None:intergenic 45.0%
AAAGACTTAGGTGGCAACCT+TGG + chr1_2:72378394-72378413 Msa0090390:CDS 45.0%
AAGAATTTCCCCGAAACTCG+TGG + chr1_2:72378625-72378644 Msa0090390:CDS 45.0%
AACACAACACCACGAGTTTC+GGG - chr1_2:72378637-72378656 None:intergenic 45.0%
CAACACAACACCACGAGTTT+CGG - chr1_2:72378638-72378657 None:intergenic 45.0%
!! GAAACTCGTGGTGTTGTGTT+GGG + chr1_2:72378637-72378656 Msa0090390:CDS 45.0%
!! AAACTCGTGGTGTTGTGTTG+GGG + chr1_2:72378638-72378657 Msa0090390:CDS 45.0%
CAAAGACAACAGCAAGAGGT+AGG - chr1_2:72378978-72378997 None:intergenic 45.0%
TTTGCTGGTACATGTGGTGT+TGG + chr1_2:72379240-72379259 Msa0090390:CDS 45.0%
GGTCAAATTGGAACCTCACT+TGG + chr1_2:72379291-72379310 Msa0090390:CDS 45.0%
AATGTGAACATGAGTGGTCG+TGG - chr1_2:72379429-72379448 None:intergenic 45.0%
!! GAGGCCATTTTGCACATCAA+AGG - chr1_2:72379490-72379509 None:intergenic 45.0%
!! TTTTGGTGCACAATGGCCAT+TGG + chr1_2:72379539-72379558 Msa0090390:CDS 45.0%
CAACTTCAACCTGCTCTGAT+CGG - chr1_2:72379884-72379903 None:intergenic 45.0%
! TCAGAGCAGGTTGAAGTTGA+AGG + chr1_2:72379885-72379904 Msa0090390:CDS 45.0%
GGTTGAAGTTGAAGGAGCTA+CGG + chr1_2:72379893-72379912 Msa0090390:CDS 45.0%
ATGACGGTGGTCCAAAATGA+CGG + chr1_2:72379921-72379940 Msa0090390:CDS 45.0%
GACAGGAAGCAAAAGCTACA+GGG + chr1_2:72379952-72379971 Msa0090390:CDS 45.0%
! TTGAAGGTGTAAGCCCGTTG+AGG + chr1_2:72378194-72378213 Msa0090390:CDS 50.0%
TATCACAGGACGATGGTTCG+TGG + chr1_2:72378249-72378268 Msa0090390:CDS 50.0%
TCAGGAGCCACCTACATGTT+TGG + chr1_2:72378301-72378320 Msa0090390:CDS 50.0%
!!! GGCAACCTTGGTGTTTTCTC+TGG + chr1_2:72378406-72378425 Msa0090390:CDS 50.0%
ACACAACACCACGAGTTTCG+GGG - chr1_2:72378636-72378655 None:intergenic 50.0%
!! CGAAACTCGTGGTGTTGTGT+TGG + chr1_2:72378636-72378655 Msa0090390:CDS 50.0%
GTCCAAAATGACGGCAAGAG+AGG + chr1_2:72379930-72379949 Msa0090390:CDS 50.0%
! GTCCTCTCTTGCCGTCATTT+TGG - chr1_2:72379935-72379954 None:intergenic 50.0%
AAATGACGGCAAGAGAGGAC+AGG + chr1_2:72379935-72379954 Msa0090390:CDS 50.0%
GGACAGGAAGCAAAAGCTAC+AGG + chr1_2:72379951-72379970 Msa0090390:CDS 50.0%
! TTGAAGGTGTAAGCCCGTTG+AGG + chr1_2:72378194-72378213 Msa0090390:CDS 50.0%
TATCACAGGACGATGGTTCG+TGG + chr1_2:72378249-72378268 Msa0090390:CDS 50.0%
TCAGGAGCCACCTACATGTT+TGG + chr1_2:72378301-72378320 Msa0090390:CDS 50.0%
!!! GGCAACCTTGGTGTTTTCTC+TGG + chr1_2:72378406-72378425 Msa0090390:CDS 50.0%
ACACAACACCACGAGTTTCG+GGG - chr1_2:72378636-72378655 None:intergenic 50.0%
!! CGAAACTCGTGGTGTTGTGT+TGG + chr1_2:72378636-72378655 Msa0090390:CDS 50.0%
GTCCAAAATGACGGCAAGAG+AGG + chr1_2:72379930-72379949 Msa0090390:CDS 50.0%
! GTCCTCTCTTGCCGTCATTT+TGG - chr1_2:72379935-72379954 None:intergenic 50.0%
AAATGACGGCAAGAGAGGAC+AGG + chr1_2:72379935-72379954 Msa0090390:CDS 50.0%
GGACAGGAAGCAAAAGCTAC+AGG + chr1_2:72379951-72379970 Msa0090390:CDS 50.0%
! GCTGGTACATGTGGTGTTGG+TGG + chr1_2:72379243-72379262 Msa0090390:CDS 55.0%
GGTGGGGTAGCTAGTCCAAT+TGG + chr1_2:72379621-72379640 Msa0090390:CDS 55.0%
!! CAAGAGGTACCGATCAGAGC+AGG + chr1_2:72379872-72379891 Msa0090390:CDS 55.0%
AGGAGCTACGGCTGAGATGA+CGG + chr1_2:72379905-72379924 Msa0090390:CDS 55.0%
! GCTGGTACATGTGGTGTTGG+TGG + chr1_2:72379243-72379262 Msa0090390:CDS 55.0%
GGTGGGGTAGCTAGTCCAAT+TGG + chr1_2:72379621-72379640 Msa0090390:CDS 55.0%
!! CAAGAGGTACCGATCAGAGC+AGG + chr1_2:72379872-72379891 Msa0090390:CDS 55.0%
AGGAGCTACGGCTGAGATGA+CGG + chr1_2:72379905-72379924 Msa0090390:CDS 55.0%
! AGCTACGGCTGAGATGACGG+TGG + chr1_2:72379908-72379927 Msa0090390:CDS 60.0%
! AGCTACGGCTGAGATGACGG+TGG + chr1_2:72379908-72379927 Msa0090390:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 72378187 72379980 72378187 ID=Msa0090390;Name=Msa0090390
chr1_2 mRNA 72378187 72379980 72378187 ID=Msa0090390-mRNA-1;Parent=Msa0090390;Name=Msa0090390-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|597
chr1_2 exon 72378187 72379980 72378187 ID=Msa0090390-mRNA-1:exon:25078;Parent=Msa0090390-mRNA-1
chr1_2 CDS 72378187 72379980 72378187 ID=Msa0090390-mRNA-1:cds;Parent=Msa0090390-mRNA-1
Gene Sequence

>Msa0090390

ATGGCGGTTGAAGGTGTAAGCCCGTTGAGGTTATCTCAAACAAAAAACCTCATAGTCCAAGTTATCACAGGACGATGGTTCGTGGTATTTGCTTCTTTTCTAATCATGTCAGCTTCAGGAGCCACCTACATGTTTGGTCTTTACTCCGGTACCATAAAAACATCCTTAGCCTATGACCAAACAACTCTTAACCTCCTTAGTTTCTTCAAAGACTTAGGTGGCAACCTTGGTGTTTTCTCTGGCTTAATCAATGAAATCACACCGCCTTATGTTGTTCTTGCAATTGGTTCCCTTCTTAATTTCTTTGGTTACTTCATGATATGGTTAGCAGTGACTAAAAAAATACCAAAACCAAAAGTTTGGCAAATGTGTCTTTACATTTGTATAGGTGCTAATTCTCAGTCTTTTTCAAACACTGGTTCACTTGTTACTTGTGTTAAGAATTTCCCCGAAACTCGTGGTGTTGTGTTGGGGATTTTAAAAGGTTATGTTGGTCTTAGTGGTGCTATTATCACACAACTTTATTCTGCTATTTATTTTGATGATCCAAAAGCTTTGATTTTGCTTATTGCTTGGCTCCCAGCAGCAATTTCCTTTCTTTTTATTCGAACCATTCGATACATGAAACCGGTTAAACAGAACAACGAACTTGGTGTTTTTTACAAGTTTTTGTATATTTCACTTGGTCTAGCTGGTTTTTTAATGGTTATGATCATATTACAGAAAAAAGTGTCTTTTAAACAGAGTGAGTATATTGGAAGTGCTTCAGTTGTTCTAATTTTGCTGTTCCTACCTCTTGCTGTTGTCTTTGTTGAACAGAAAAAGAGTCAAATGAGTCAAAAGCTTGCATTTGTCGATCCATTTTCGGTTAAAATAGTAACTGATCAAGAAGTGAAAAAGTCTGCAGCAAAAAATTGTGATACTAATGCAATGGTTTGCGTTGTTGAACAAAAAGAAACTAGATGGTGGCAAAATATTTTTAGTCCACCTGAACAAGGTGAAGATTTTACAATACTTCAAGCCCTTTTCAGCATAGATATGTTATTGCTATTCTTTGCTGGTACATGTGGTGTTGGTGGAACTTTAACAGCAATTGATAATTTAGGTCAAATTGGAACCTCACTTGGATACCCAAAAACAAGCATAAGCACATTTGTTTCATTAGTGAGTATTTGGAATTACCTAGGAAGAGTTTTTTCTGGTTTTGTTTCTGAACATGTTTTAACAAAGTACAAATTTCCACGACCACTCATGTTCACATTGATTATGTTTTTATCCTGTGTCGGTCACTTATTGATAGCCTTTGATGTGCAAAATGGCCTCTATTTTGCTTCAGTAATCATTGGATTTTGTTTTGGTGCACAATGGCCATTGGTTTTTGCCATAATTTCGGAGTTGTTTGGTTTGAAATATTATTCAACTTTGATGAACTTTGGTGGGGTAGCTAGTCCAATTGGATTATATTTTCTTAATGTTAGGGTCGCTGGTCATTTATATGACAAAGAAGCTAAGAGGCAATTGATTGAAAAAGGAGTACAAAGAAAATTGGGTCAGGAATTGAATTGTGTAGGAGCAAGTTGTTTCAGATTGTCTTTCATTATTATCACTGCAGCTACTTTGTTTGGTGCCATTATTTCACTTATTTTAGTGGCTAGAACAATTAAGTTTTATAAAGGTGATATATACAAGAGGTACCGATCAGAGCAGGTTGAAGTTGAAGGAGCTACGGCTGAGATGACGGTGGTCCAAAATGACGGCAAGAGAGGACAGGAAGCAAAAGCTACAGGGATGTGA

Protein sequence

>Msa0090390

MAVEGVSPLRLSQTKNLIVQVITGRWFVVFASFLIMSASGATYMFGLYSGTIKTSLAYDQTTLNLLSFFKDLGGNLGVFSGLINEITPPYVVLAIGSLLNFFGYFMIWLAVTKKIPKPKVWQMCLYICIGANSQSFSNTGSLVTCVKNFPETRGVVLGILKGYVGLSGAIITQLYSAIYFDDPKALILLIAWLPAAISFLFIRTIRYMKPVKQNNELGVFYKFLYISLGLAGFLMVMIILQKKVSFKQSEYIGSASVVLILLFLPLAVVFVEQKKSQMSQKLAFVDPFSVKIVTDQEVKKSAAKNCDTNAMVCVVEQKETRWWQNIFSPPEQGEDFTILQALFSIDMLLLFFAGTCGVGGTLTAIDNLGQIGTSLGYPKTSISTFVSLVSIWNYLGRVFSGFVSEHVLTKYKFPRPLMFTLIMFLSCVGHLLIAFDVQNGLYFASVIIGFCFGAQWPLVFAIISELFGLKYYSTLMNFGGVASPIGLYFLNVRVAGHLYDKEAKRQLIEKGVQRKLGQELNCVGASCFRLSFIIITAATLFGAIISLILVARTIKFYKGDIYKRYRSEQVEVEGATAEMTVVQNDGKRGQEAKATGM*