Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0090390 | XP_013470234.1 | 97.324 | 598 | 12 | 2 | 1 | 597 | 1 | 595 | 0.0 | 1171 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0090390 | sp|F4I9E1|NFD4_ARATH | 22.456 | 570 | 394 | 13 | 25 | 579 | 43 | 579 | 8.02e-23 | 106 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0090390 | A0A072VR59 | 97.324 | 598 | 12 | 2 | 1 | 597 | 1 | 595 | 0.0 | 1171 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0005270 | Msa0090390 | 0.818403 | 1.996016e-52 | -8.615850e-47 |
Msa0008220 | Msa0090390 | 0.823108 | 1.653770e-53 | -8.615850e-47 |
Msa0009100 | Msa0090390 | 0.806144 | 9.489168e-50 | -8.615850e-47 |
Msa0012710 | Msa0090390 | 0.804276 | 2.334620e-49 | -8.615850e-47 |
Msa0015460 | Msa0090390 | 0.838135 | 3.443011e-57 | -8.615850e-47 |
Msa0017320 | Msa0090390 | 0.829311 | 5.525910e-55 | -8.615850e-47 |
Msa0029850 | Msa0090390 | 0.815177 | 1.056749e-51 | -8.615850e-47 |
Msa0032860 | Msa0090390 | 0.809205 | 2.122551e-50 | -8.615850e-47 |
Msa0045550 | Msa0090390 | 0.829969 | 3.822882e-55 | -8.615850e-47 |
Msa0051450 | Msa0090390 | 0.804520 | 2.076764e-49 | -8.615850e-47 |
Msa0052860 | Msa0090390 | 0.802453 | 5.570556e-49 | -8.615850e-47 |
Msa0055070 | Msa0090390 | 0.824671 | 7.112487e-54 | -8.615850e-47 |
Msa0057370 | Msa0090390 | 0.812100 | 5.024913e-51 | -8.615850e-47 |
Msa0059890 | Msa0090390 | 0.838775 | 2.354068e-57 | -8.615850e-47 |
Msa0076700 | Msa0090390 | 0.809080 | 2.257638e-50 | -8.615850e-47 |
Msa0077180 | Msa0090390 | 0.812458 | 4.197773e-51 | -8.615850e-47 |
Msa0081650 | Msa0090390 | 0.832710 | 8.092878e-56 | -8.615850e-47 |
Msa0084430 | Msa0090390 | 0.815658 | 8.258494e-52 | -8.615850e-47 |
Msa0085720 | Msa0090390 | 0.832954 | 7.038359e-56 | -8.615850e-47 |
Msa0090390 | Msa0092170 | 0.823117 | 1.646227e-53 | -8.615850e-47 |
Msa0090390 | Msa0092410 | 0.806755 | 7.051407e-50 | -8.615850e-47 |
Msa0090390 | Msa0092440 | 0.811428 | 7.035109e-51 | -8.615850e-47 |
Msa0090390 | Msa0096580 | 0.813777 | 2.155783e-51 | -8.615850e-47 |
Msa0090390 | Msa0097590 | 0.804038 | 2.616420e-49 | -8.615850e-47 |
Msa0090390 | Msa0097610 | 0.810736 | 9.936337e-51 | -8.615850e-47 |
Msa0090390 | Msa0101020 | 0.826658 | 2.404510e-54 | -8.615850e-47 |
Msa0090390 | Msa0101830 | 0.808968 | 2.385960e-50 | -8.615850e-47 |
Msa0090390 | Msa0109590 | 0.834849 | 2.362523e-56 | -8.615850e-47 |
Msa0090390 | Msa0124550 | 0.839145 | 1.887219e-57 | -8.615850e-47 |
Msa0090390 | Msa0126230 | 0.808376 | 3.192318e-50 | -8.615850e-47 |
Msa0090390 | Msa0130520 | 0.825121 | 5.570397e-54 | -8.615850e-47 |
Msa0090390 | Msa0137870 | 0.994125 | 9.217345e-205 | -8.615850e-47 |
Msa0090390 | Msa0138210 | 0.805278 | 1.442267e-49 | -8.615850e-47 |
Msa0090390 | Msa0138640 | 0.800617 | 1.325071e-48 | -8.615850e-47 |
Msa0090390 | Msa0140510 | -0.800750 | 1.244901e-48 | -8.615850e-47 |
Msa0090390 | Msa0140520 | -0.800348 | 1.503368e-48 | -8.615850e-47 |
Msa0090390 | Msa0145110 | 0.820884 | 5.416182e-53 | -8.615850e-47 |
Msa0090390 | Msa0155340 | 0.804925 | 1.709740e-49 | -8.615850e-47 |
Msa0090390 | Msa0155880 | 0.831678 | 1.456408e-55 | -8.615850e-47 |
Msa0090390 | Msa0169820 | 0.817963 | 2.510318e-52 | -8.615850e-47 |
Msa0090390 | Msa0174000 | 0.806416 | 8.314012e-50 | -8.615850e-47 |
Msa0090390 | Msa0174390 | 0.815862 | 7.437022e-52 | -8.615850e-47 |
Msa0090390 | Msa0175050 | 0.834598 | 2.731672e-56 | -8.615850e-47 |
Msa0090390 | Msa0178510 | 0.822986 | 1.765673e-53 | -8.615850e-47 |
Msa0090390 | Msa0183010 | -0.808908 | 2.457370e-50 | -8.615850e-47 |
Msa0090390 | Msa0185510 | 0.815586 | 8.568351e-52 | -8.615850e-47 |
Msa0090390 | Msa0187230 | 0.819820 | 9.500205e-53 | -8.615850e-47 |
Msa0090390 | Msa0187250 | 0.807612 | 4.642967e-50 | -8.615850e-47 |
Msa0090390 | Msa0187490 | 0.826244 | 3.016567e-54 | -8.615850e-47 |
Msa0090390 | Msa0187830 | 0.831241 | 1.866421e-55 | -8.615850e-47 |
Msa0090390 | Msa0190950 | 0.805243 | 1.466601e-49 | -8.615850e-47 |
Msa0090390 | Msa0193540 | 0.810856 | 9.360333e-51 | -8.615850e-47 |
Msa0090390 | Msa0196340 | 0.804979 | 1.665820e-49 | -8.615850e-47 |
Msa0090390 | Msa0220080 | 0.807454 | 5.015200e-50 | -8.615850e-47 |
Msa0090390 | Msa0223120 | 0.802323 | 5.925403e-49 | -8.615850e-47 |
Msa0090390 | Msa0224190 | 0.801836 | 7.459724e-49 | -8.615850e-47 |
Msa0090390 | Msa0226180 | 0.816316 | 5.887629e-52 | -8.615850e-47 |
Msa0090390 | Msa0227230 | 0.829654 | 4.561469e-55 | -8.615850e-47 |
Msa0090390 | Msa0231790 | 0.800968 | 1.123606e-48 | -8.615850e-47 |
Msa0090390 | Msa0233370 | 0.808964 | 2.391151e-50 | -8.615850e-47 |
Msa0090390 | Msa0233380 | 0.820951 | 5.228347e-53 | -8.615850e-47 |
Msa0090390 | Msa0235880 | 0.808928 | 2.433839e-50 | -8.615850e-47 |
Msa0090390 | Msa0236070 | 0.850199 | 1.981638e-60 | -8.615850e-47 |
Msa0090390 | Msa0236770 | 0.803133 | 4.031317e-49 | -8.615850e-47 |
Msa0090390 | Msa0238230 | 0.823584 | 1.280106e-53 | -8.615850e-47 |
Msa0090390 | Msa0244140 | 0.807545 | 4.798085e-50 | -8.615850e-47 |
Msa0090390 | Msa0244190 | 0.809176 | 2.153903e-50 | -8.615850e-47 |
Msa0090390 | Msa0251770 | 0.803491 | 3.399338e-49 | -8.615850e-47 |
Msa0090390 | Msa0262370 | 0.820087 | 8.255315e-53 | -8.615850e-47 |
Msa0090390 | Msa0265150 | 0.804931 | 1.704826e-49 | -8.615850e-47 |
Msa0090390 | Msa0265160 | 0.812629 | 3.850836e-51 | -8.615850e-47 |
Msa0090390 | Msa0266240 | 0.844304 | 8.215086e-59 | -8.615850e-47 |
Msa0090390 | Msa0268090 | 0.802438 | 5.609381e-49 | -8.615850e-47 |
Msa0090390 | Msa0269520 | 0.805601 | 1.233549e-49 | -8.615850e-47 |
Msa0090390 | Msa0271360 | 0.828347 | 9.454535e-55 | -8.615850e-47 |
Msa0090390 | Msa0274100 | 0.801627 | 8.236147e-49 | -8.615850e-47 |
Msa0090390 | Msa0274630 | 0.807558 | 4.766274e-50 | -8.615850e-47 |
Msa0090390 | Msa0279210 | -0.818512 | 1.885986e-52 | -8.615850e-47 |
Msa0090390 | Msa0281480 | 0.816474 | 5.427969e-52 | -8.615850e-47 |
Msa0090390 | Msa0287670 | 0.808754 | 2.651113e-50 | -8.615850e-47 |
Msa0090390 | Msa0292170 | 0.817298 | 3.545007e-52 | -8.615850e-47 |
Msa0090390 | Msa0296980 | -0.839114 | 1.923031e-57 | -8.615850e-47 |
Msa0090390 | Msa0300150 | 0.841370 | 4.952005e-58 | -8.615850e-47 |
Msa0090390 | Msa0304100 | 0.800804 | 1.213602e-48 | -8.615850e-47 |
Msa0090390 | Msa0304840 | 0.859044 | 5.428273e-63 | -8.615850e-47 |
Msa0090390 | Msa0308200 | 0.805872 | 1.082091e-49 | -8.615850e-47 |
Msa0090390 | Msa0309880 | 0.821384 | 4.155355e-53 | -8.615850e-47 |
Msa0090390 | Msa0311470 | 0.839024 | 2.028491e-57 | -8.615850e-47 |
Msa0090390 | Msa0311720 | 0.806260 | 8.966139e-50 | -8.615850e-47 |
Msa0090390 | Msa0314060 | 0.805787 | 1.127549e-49 | -8.615850e-47 |
Msa0090390 | Msa0314120 | 0.800325 | 1.519411e-48 | -8.615850e-47 |
Msa0090390 | Msa0322680 | 0.800994 | 1.110057e-48 | -8.615850e-47 |
Msa0090390 | Msa0337060 | 0.805027 | 1.627217e-49 | -8.615850e-47 |
Msa0090390 | Msa0339740 | 0.803364 | 3.611803e-49 | -8.615850e-47 |
Msa0090390 | Msa0340690 | 0.841750 | 3.932852e-58 | -8.615850e-47 |
Msa0090390 | Msa0340710 | 0.818448 | 1.949932e-52 | -8.615850e-47 |
Msa0090390 | Msa0341230 | 0.862277 | 5.679945e-64 | -8.615850e-47 |
Msa0090390 | Msa0347950 | 0.816776 | 4.645898e-52 | -8.615850e-47 |
Msa0090390 | Msa0347990 | 0.825582 | 4.332706e-54 | -8.615850e-47 |
Msa0090390 | Msa0377440 | 0.847155 | 1.382754e-59 | -8.615850e-47 |
Msa0090390 | Msa0378380 | 0.819276 | 1.264774e-52 | -8.615850e-47 |
Msa0090390 | Msa0381000 | 0.804408 | 2.191884e-49 | -8.615850e-47 |
Msa0090390 | Msa0387050 | 0.842868 | 1.987666e-58 | -8.615850e-47 |
Msa0090390 | Msa0387370 | 0.832261 | 1.045816e-55 | -8.615850e-47 |
Msa0090390 | Msa0388030 | -0.829188 | 5.920423e-55 | -8.615850e-47 |
Msa0090390 | Msa0388650 | 0.843130 | 1.693266e-58 | -8.615850e-47 |
Msa0090390 | Msa0389810 | 0.809681 | 1.677858e-50 | -8.615850e-47 |
Msa0090390 | Msa0390960 | 0.822344 | 2.490741e-53 | -8.615850e-47 |
Msa0090390 | Msa0398200 | 0.809332 | 1.993626e-50 | -8.615850e-47 |
Msa0090390 | Msa0410300 | 0.838354 | 3.023534e-57 | -8.615850e-47 |
Msa0090390 | Msa0417650 | 0.824582 | 7.465043e-54 | -8.615850e-47 |
Msa0090390 | Msa0417730 | 0.809463 | 1.869225e-50 | -8.615850e-47 |
Msa0090390 | Msa0422180 | 0.805746 | 1.150103e-49 | -8.615850e-47 |
Msa0090390 | Msa0430870 | 0.817190 | 3.749468e-52 | -8.615850e-47 |
Msa0090390 | Msa0430950 | 0.815129 | 1.082801e-51 | -8.615850e-47 |
Msa0090390 | Msa0433530 | 0.809245 | 2.081716e-50 | -8.615850e-47 |
Msa0090390 | Msa0436190 | 0.834004 | 3.850565e-56 | -8.615850e-47 |
Msa0090390 | Msa0436920 | -0.817573 | 3.074210e-52 | -8.615850e-47 |
Msa0090390 | Msa0437400 | 0.815155 | 1.068733e-51 | -8.615850e-47 |
Msa0090390 | Msa0438040 | 0.807067 | 6.058055e-50 | -8.615850e-47 |
Msa0090390 | Msa0442310 | 0.804461 | 2.136270e-49 | -8.615850e-47 |
Msa0090390 | Msa0445280 | 0.801226 | 9.949376e-49 | -8.615850e-47 |
Msa0090390 | Msa0461590 | 0.835553 | 1.569505e-56 | -8.615850e-47 |
Msa0090390 | Msa0467220 | 0.801733 | 7.834482e-49 | -8.615850e-47 |
Msa0090390 | Msa0468130 | 0.813832 | 2.096710e-51 | -8.615850e-47 |
Msa0090390 | Msa0481280 | 0.807630 | 4.601839e-50 | -8.615850e-47 |
Msa0090390 | Msa0482180 | 0.838567 | 2.663388e-57 | -8.615850e-47 |
Msa0090390 | Msa0485490 | 0.822068 | 2.886288e-53 | -8.615850e-47 |
Msa0090390 | Msa0485680 | 0.814590 | 1.425898e-51 | -8.615850e-47 |
Msa0090390 | Msa0514610 | 0.810087 | 1.372143e-50 | -8.615850e-47 |
Msa0090390 | Msa0517090 | 0.817710 | 2.862974e-52 | -8.615850e-47 |
Msa0090390 | Msa0517650 | 0.822407 | 2.408233e-53 | -8.615850e-47 |
Msa0090390 | Msa0518440 | 0.802670 | 5.024728e-49 | -8.615850e-47 |
Msa0090390 | Msa0518560 | 0.804485 | 2.111471e-49 | -8.615850e-47 |
Msa0090390 | Msa0524600 | 0.808628 | 2.820994e-50 | -8.615850e-47 |
Msa0090390 | Msa0530100 | 0.800662 | 1.297565e-48 | -8.615850e-47 |
Msa0090390 | Msa0530650 | 0.815351 | 9.666901e-52 | -8.615850e-47 |
Msa0090390 | Msa0532930 | 0.801272 | 9.736191e-49 | -8.615850e-47 |
Msa0090390 | Msa0534410 | 0.830079 | 3.593769e-55 | -8.615850e-47 |
Msa0090390 | Msa0537770 | 0.826814 | 2.206085e-54 | -8.615850e-47 |
Msa0090390 | Msa0538160 | 0.801869 | 7.346360e-49 | -8.615850e-47 |
Msa0090390 | Msa0541040 | 0.804103 | 2.536156e-49 | -8.615850e-47 |
Msa0090390 | Msa0545290 | 0.818393 | 2.006353e-52 | -8.615850e-47 |
Msa0090390 | Msa0546570 | 0.805261 | 1.453705e-49 | -8.615850e-47 |
Msa0090390 | Msa0557950 | -0.801100 | 1.055799e-48 | -8.615850e-47 |
Msa0090390 | Msa0573040 | 0.807939 | 3.956580e-50 | -8.615850e-47 |
Msa0090390 | Msa0573580 | 0.808155 | 3.557844e-50 | -8.615850e-47 |
Msa0090390 | Msa0586070 | 0.819555 | 1.092449e-52 | -8.615850e-47 |
Msa0090390 | Msa0587190 | 0.829275 | 5.638593e-55 | -8.615850e-47 |
Msa0090390 | Msa0590650 | 0.822314 | 2.531167e-53 | -8.615850e-47 |
Msa0090390 | Msa0592180 | 0.821964 | 3.051596e-53 | -8.615850e-47 |
Msa0090390 | Msa0594200 | 0.835224 | 1.900474e-56 | -8.615850e-47 |
Msa0090390 | Msa0597000 | 0.823044 | 1.711603e-53 | -8.615850e-47 |
Msa0090390 | Msa0600410 | -0.812833 | 3.475495e-51 | -8.615850e-47 |
Msa0090390 | Msa0600890 | 0.819868 | 9.264678e-53 | -8.615850e-47 |
Msa0090390 | Msa0613460 | 0.820203 | 7.766277e-53 | -8.615850e-47 |
Msa0090390 | Msa0615220 | 0.849316 | 3.496260e-60 | -8.615850e-47 |
Msa0090390 | Msa0618200 | -0.821292 | 4.363120e-53 | -8.615850e-47 |
Msa0090390 | Msa0620330 | 0.808219 | 3.448505e-50 | -8.615850e-47 |
Msa0090390 | Msa0620620 | 0.809696 | 1.665680e-50 | -8.615850e-47 |
Msa0090390 | Msa0624960 | 0.803012 | 4.269960e-49 | -8.615850e-47 |
Msa0090390 | Msa0626850 | 0.811535 | 6.668131e-51 | -8.615850e-47 |
Msa0090390 | Msa0626990 | 0.816480 | 5.412423e-52 | -8.615850e-47 |
Msa0090390 | Msa0627350 | 0.818947 | 1.502271e-52 | -8.615850e-47 |
Msa0090390 | Msa0628290 | 0.815416 | 9.350584e-52 | -8.615850e-47 |
Msa0090390 | Msa0630950 | 0.828673 | 7.887881e-55 | -8.615850e-47 |
Msa0090390 | Msa0641320 | 0.842750 | 2.137329e-58 | -8.615850e-47 |
Msa0090390 | Msa0641340 | 0.818803 | 1.620249e-52 | -8.615850e-47 |
Msa0090390 | Msa0641730 | 0.820676 | 6.047565e-53 | -8.615850e-47 |
Msa0090390 | Msa0643320 | 0.810355 | 1.200968e-50 | -8.615850e-47 |
Msa0090390 | Msa0653320 | -0.807527 | 4.840214e-50 | -8.615850e-47 |
Msa0090390 | Msa0657460 | -0.818262 | 2.148801e-52 | -8.615850e-47 |
Msa0090390 | Msa0667740 | 0.822521 | 2.265449e-53 | -8.615850e-47 |
Msa0090390 | Msa0669190 | 0.826127 | 3.217153e-54 | -8.615850e-47 |
Msa0090390 | Msa0679550 | 0.837519 | 4.955530e-57 | -8.615850e-47 |
Msa0090390 | Msa0679810 | 0.815663 | 8.237985e-52 | -8.615850e-47 |
Msa0090390 | Msa0682090 | 0.822672 | 2.089502e-53 | -8.615850e-47 |
Msa0090390 | Msa0682140 | 0.819999 | 8.645204e-53 | -8.615850e-47 |
Msa0090390 | Msa0683140 | 0.802076 | 6.660074e-49 | -8.615850e-47 |
Msa0090390 | Msa0689420 | 0.833695 | 4.600513e-56 | -8.615850e-47 |
Msa0090390 | Msa0689760 | 0.814329 | 1.628727e-51 | -8.615850e-47 |
Msa0090390 | Msa0689780 | 0.828850 | 7.148115e-55 | -8.615850e-47 |
Msa0090390 | Msa0698440 | 0.805804 | 1.118650e-49 | -8.615850e-47 |
Msa0090390 | Msa0703910 | 0.804268 | 2.343784e-49 | -8.615850e-47 |
Msa0090390 | Msa0709160 | 0.810816 | 9.549538e-51 | -8.615850e-47 |
Msa0090390 | Msa0715410 | 0.859850 | 3.108073e-63 | -8.615850e-47 |
Msa0090390 | Msa0716960 | 0.805113 | 1.561703e-49 | -8.615850e-47 |
Msa0090390 | Msa0717010 | 0.802175 | 6.356039e-49 | -8.615850e-47 |
Msa0090390 | Msa0721280 | 0.806176 | 9.339133e-50 | -8.615850e-47 |
Msa0090390 | Msa0721340 | 0.822590 | 2.183931e-53 | -8.615850e-47 |
Msa0090390 | Msa0724950 | 0.804843 | 1.778199e-49 | -8.615850e-47 |
Msa0090390 | Msa0731180 | 0.824737 | 6.863152e-54 | -8.615850e-47 |
Msa0090390 | Msa0742150 | 0.801574 | 8.444282e-49 | -8.615850e-47 |
Msa0090390 | Msa0747260 | 0.802673 | 5.018692e-49 | -8.615850e-47 |
Msa0090390 | Msa0749440 | 0.810958 | 8.898806e-51 | -8.615850e-47 |
Msa0090390 | Msa0750250 | 0.802213 | 6.242732e-49 | -8.615850e-47 |
Msa0090390 | Msa0751850 | 0.800021 | 1.752171e-48 | -8.615850e-47 |
Msa0090390 | Msa0754920 | 0.801808 | 7.559488e-49 | -8.615850e-47 |
Msa0090390 | Msa0760350 | 0.803866 | 2.840717e-49 | -8.615850e-47 |
Msa0090390 | Msa0771580 | 0.816246 | 6.104704e-52 | -8.615850e-47 |
Msa0090390 | Msa0779090 | 0.822082 | 2.865163e-53 | -8.615850e-47 |
Msa0090390 | Msa0780280 | 0.832953 | 7.041955e-56 | -8.615850e-47 |
Msa0090390 | Msa0789560 | 0.812950 | 3.276295e-51 | -8.615850e-47 |
Msa0090390 | Msa0793140 | -0.809399 | 1.928934e-50 | -8.615850e-47 |
Msa0090390 | Msa0799060 | 0.845242 | 4.587432e-59 | -8.615850e-47 |
Msa0090390 | Msa0801730 | 0.809345 | 1.980716e-50 | -8.615850e-47 |
Msa0090390 | Msa0805430 | 0.809093 | 2.243848e-50 | -8.615850e-47 |
Msa0090390 | Msa0809140 | 0.869009 | 4.268896e-66 | -8.615850e-47 |
Msa0090390 | Msa0817120 | 0.808799 | 2.592960e-50 | -8.615850e-47 |
Msa0090390 | Msa0821800 | 0.836023 | 1.192855e-56 | -8.615850e-47 |
Msa0090390 | Msa0826760 | 0.802223 | 6.210884e-49 | -8.615850e-47 |
Msa0090390 | Msa0837780 | 0.811251 | 7.688585e-51 | -8.615850e-47 |
Msa0090390 | Msa0844390 | 0.806442 | 8.211297e-50 | -8.615850e-47 |
Msa0090390 | Msa0845070 | 0.815790 | 7.716412e-52 | -8.615850e-47 |
Msa0090390 | Msa0849810 | 0.819673 | 1.026518e-52 | -8.615850e-47 |
Msa0090390 | Msa0861830 | 0.831321 | 1.783759e-55 | -8.615850e-47 |
Msa0090390 | Msa0875480 | 0.818802 | 1.621147e-52 | -8.615850e-47 |
Msa0090390 | Msa0877710 | 0.813670 | 2.275349e-51 | -8.615850e-47 |
Msa0090390 | Msa0878100 | 0.815750 | 7.879637e-52 | -8.615850e-47 |
Msa0090390 | Msa0880040 | 0.837131 | 6.227551e-57 | -8.615850e-47 |
Msa0090390 | Msa0890550 | 0.827033 | 1.955935e-54 | -8.615850e-47 |
Msa0090390 | Msa0902830 | 0.804774 | 1.838468e-49 | -8.615850e-47 |
Msa0090390 | Msa0918390 | 0.825099 | 5.638671e-54 | -8.615850e-47 |
Msa0090390 | Msa0945100 | 0.827186 | 1.797621e-54 | -8.615850e-47 |
Msa0090390 | Msa0945120 | 0.992434 | 2.899053e-193 | -8.615850e-47 |
Msa0090390 | Msa0965020 | 0.804915 | 1.717510e-49 | -8.615850e-47 |
Msa0090390 | Msa0980020 | 0.805440 | 1.333881e-49 | -8.615850e-47 |
Msa0090390 | Msa0981310 | 0.821882 | 3.188128e-53 | -8.615850e-47 |
Msa0090390 | Msa0982270 | 0.806921 | 6.504575e-50 | -8.615850e-47 |
Msa0090390 | Msa0990580 | 0.821245 | 4.474141e-53 | -8.615850e-47 |
Msa0090390 | Msa0992600 | 0.812502 | 4.104342e-51 | -8.615850e-47 |
Msa0090390 | Msa0994370 | 0.830652 | 2.603133e-55 | -8.615850e-47 |
Msa0090390 | Msa1010070 | 0.805186 | 1.507401e-49 | -8.615850e-47 |
Msa0090390 | Msa1021510 | 0.829340 | 5.436950e-55 | -8.615850e-47 |
Msa0090390 | Msa1029080 | -0.807786 | 4.264545e-50 | -8.615850e-47 |
Msa0090390 | Msa1032170 | 0.814846 | 1.251421e-51 | -8.615850e-47 |
Msa0090390 | Msa1034280 | 0.807315 | 5.367555e-50 | -8.615850e-47 |
Msa0090390 | Msa1036740 | 0.825912 | 3.619039e-54 | -8.615850e-47 |
Msa0090390 | Msa1036910 | 0.821217 | 4.540305e-53 | -8.615850e-47 |
Msa0090390 | Msa1042660 | 0.804527 | 2.069491e-49 | -8.615850e-47 |
Msa0090390 | Msa1048750 | -0.811070 | 8.412042e-51 | -8.615850e-47 |
Msa0090390 | Msa1050740 | 0.818226 | 2.189327e-52 | -8.615850e-47 |
Msa0090390 | Msa1063420 | 0.826085 | 3.291298e-54 | -8.615850e-47 |
Msa0090390 | Msa1073830 | 0.802172 | 6.364778e-49 | -8.615850e-47 |
Msa0090390 | Msa1077070 | 0.825099 | 5.637622e-54 | -8.615850e-47 |
Msa0090390 | Msa1077340 | 0.822810 | 1.940570e-53 | -8.615850e-47 |
Msa0090390 | Msa1081220 | 0.827456 | 1.549062e-54 | -8.615850e-47 |
Msa0090390 | Msa1081240 | 0.814375 | 1.590539e-51 | -8.615850e-47 |
Msa0090390 | Msa1087510 | -0.806477 | 8.070930e-50 | -8.615850e-47 |
Msa0090390 | Msa1088290 | 0.805552 | 1.263570e-49 | -8.615850e-47 |
Msa0090390 | Msa1098890 | 0.804088 | 2.554636e-49 | -8.615850e-47 |
Msa0090390 | Msa1100520 | -0.800533 | 1.378268e-48 | -8.615850e-47 |
Msa0090390 | Msa1103660 | -0.814420 | 1.554731e-51 | -8.615850e-47 |
Msa0090390 | Msa1105500 | 0.815673 | 8.197334e-52 | -8.615850e-47 |
Msa0090390 | Msa1109820 | 0.808757 | 2.647314e-50 | -8.615850e-47 |
Msa0090390 | Msa1113230 | -0.803152 | 3.995184e-49 | -8.615850e-47 |
Msa0090390 | Msa1113590 | 0.812154 | 4.890969e-51 | -8.615850e-47 |
Msa0090390 | Msa1115280 | 0.840801 | 6.984797e-58 | -8.615850e-47 |
Msa0090390 | Msa1122780 | 0.828591 | 8.259094e-55 | -8.615850e-47 |
Msa0090390 | Msa1126570 | 0.803229 | 3.851512e-49 | -8.615850e-47 |
Msa0090390 | Msa1130530 | 0.810272 | 1.251619e-50 | -8.615850e-47 |
Msa0090390 | Msa1143020 | 0.807131 | 5.871243e-50 | -8.615850e-47 |
Msa0090390 | Msa1144040 | 0.810801 | 9.622512e-51 | -8.615850e-47 |
Msa0090390 | Msa1156170 | -0.806013 | 1.010628e-49 | -8.615850e-47 |
Msa0090390 | Msa1163870 | 0.826663 | 2.397031e-54 | -8.615850e-47 |
Msa0090390 | Msa1164020 | 0.849267 | 3.608748e-60 | -8.615850e-47 |
Msa0090390 | Msa1172130 | -0.817562 | 3.091345e-52 | -8.615850e-47 |
Msa0090390 | Msa1174310 | 0.835973 | 1.228048e-56 | -8.615850e-47 |
Msa0090390 | Msa1176270 | 0.820758 | 5.792328e-53 | -8.615850e-47 |
Msa0090390 | Msa1177780 | 0.841559 | 4.415726e-58 | -8.615850e-47 |
Msa0090390 | Msa1181170 | -0.807966 | 3.903215e-50 | -8.615850e-47 |
Msa0090390 | Msa1188600 | -0.810752 | 9.857862e-51 | -8.615850e-47 |
Msa0090390 | Msa1190970 | 0.808587 | 2.878379e-50 | -8.615850e-47 |
Msa0090390 | Msa1205760 | 0.801548 | 8.547396e-49 | -8.615850e-47 |
Msa0090390 | Msa1206310 | 0.802927 | 4.447247e-49 | -8.615850e-47 |
Msa0090390 | Msa1207350 | 0.805863 | 1.087185e-49 | -8.615850e-47 |
Msa0090390 | Msa1209190 | 0.802444 | 5.594311e-49 | -8.615850e-47 |
Msa0090390 | Msa1215070 | 0.820284 | 7.439260e-53 | -8.615850e-47 |
Msa0090390 | Msa1220870 | 0.816948 | 4.249311e-52 | -8.615850e-47 |
Msa0090390 | Msa1224580 | -0.819230 | 1.295261e-52 | -8.615850e-47 |
Msa0090390 | Msa1229610 | 0.807033 | 6.157430e-50 | -8.615850e-47 |
Msa0090390 | Msa1229850 | 0.842750 | 2.136573e-58 | -8.615850e-47 |
Msa0090390 | Msa1233950 | 0.819011 | 1.453181e-52 | -8.615850e-47 |
Msa0090390 | Msa1235400 | 0.814491 | 1.499859e-51 | -8.615850e-47 |
Msa0090390 | Msa1236070 | -0.815097 | 1.100525e-51 | -8.615850e-47 |
Msa0090390 | Msa1244640 | 0.802592 | 5.214672e-49 | -8.615850e-47 |
Msa0090390 | Msa1250110 | 0.801318 | 9.526877e-49 | -8.615850e-47 |
Msa0090390 | Msa1250730 | 0.812112 | 4.995291e-51 | -8.615850e-47 |
Msa0090390 | Msa1253450 | 0.802159 | 6.403798e-49 | -8.615850e-47 |
Msa0090390 | Msa1258370 | 0.828948 | 6.766653e-55 | -8.615850e-47 |
Msa0090390 | Msa1263290 | -0.838214 | 3.285288e-57 | -8.615850e-47 |
Msa0090390 | Msa1270660 | 0.851549 | 8.253420e-61 | -8.615850e-47 |
Msa0090390 | Msa1270730 | 0.842944 | 1.897951e-58 | -8.615850e-47 |
Msa0090390 | Msa1272320 | 0.810265 | 1.255934e-50 | -8.615850e-47 |
Msa0090390 | Msa1276340 | 0.826245 | 3.014794e-54 | -8.615850e-47 |
Msa0090390 | Msa1280620 | 0.812217 | 4.738278e-51 | -8.615850e-47 |
Msa0090390 | Msa1285890 | 0.820761 | 5.782513e-53 | -8.615850e-47 |
Msa0090390 | Msa1293590 | 0.823080 | 1.679146e-53 | -8.615850e-47 |
Msa0090390 | Msa1296300 | 0.819151 | 1.350167e-52 | -8.615850e-47 |
Msa0090390 | Msa1305350 | 0.805608 | 1.229800e-49 | -8.615850e-47 |
Msa0090390 | Msa1307550 | 0.820539 | 6.502608e-53 | -8.615850e-47 |
Msa0090390 | Msa1307740 | 0.818911 | 1.531146e-52 | -8.615850e-47 |
Msa0090390 | Msa1314770 | 0.827844 | 1.249892e-54 | -8.615850e-47 |
Msa0090390 | Msa1332050 | 0.850696 | 1.437305e-60 | -8.615850e-47 |
Msa0090390 | Msa1333420 | 0.804194 | 2.428697e-49 | -8.615850e-47 |
Msa0090390 | Msa1333730 | 0.800582 | 1.347240e-48 | -8.615850e-47 |
Msa0090390 | Msa1335230 | 0.828757 | 7.528731e-55 | -8.615850e-47 |
Msa0090390 | Msa1335710 | 0.812882 | 3.390417e-51 | -8.615850e-47 |
Msa0090390 | Msa1336040 | 0.810767 | 9.786974e-51 | -8.615850e-47 |
Msa0090390 | Msa1337480 | 0.802094 | 6.602709e-49 | -8.615850e-47 |
Msa0090390 | Msa1338250 | 0.814790 | 1.287341e-51 | -8.615850e-47 |
Msa0090390 | Msa1338400 | 0.802426 | 5.643013e-49 | -8.615850e-47 |
Msa0090390 | Msa1341490 | 0.816723 | 4.774609e-52 | -8.615850e-47 |
Msa0090390 | Msa1348600 | 0.815618 | 8.431059e-52 | -8.615850e-47 |
Msa0090390 | Msa1349450 | 0.812559 | 3.989412e-51 | -8.615850e-47 |
Msa0090390 | Msa1350690 | 0.811306 | 7.478109e-51 | -8.615850e-47 |
Msa0090390 | Msa1352540 | -0.812318 | 4.502255e-51 | -8.615850e-47 |
Msa0090390 | Msa1357890 | 0.809844 | 1.548187e-50 | -8.615850e-47 |
Msa0090390 | Msa1359320 | 0.809387 | 1.940258e-50 | -8.615850e-47 |
Msa0090390 | Msa1359920 | 0.813611 | 2.344665e-51 | -8.615850e-47 |
Msa0090390 | Msa1360240 | 0.839614 | 1.426043e-57 | -8.615850e-47 |
Msa0090390 | Msa1366300 | 0.802385 | 5.753700e-49 | -8.615850e-47 |
Msa0090390 | Msa1371940 | 0.808483 | 3.029279e-50 | -8.615850e-47 |
Msa0090390 | Msa1372150 | 0.817240 | 3.653093e-52 | -8.615850e-47 |
Msa0090390 | Msa1376130 | 0.804785 | 1.828469e-49 | -8.615850e-47 |
Msa0090390 | Msa1376930 | 0.800481 | 1.412505e-48 | -8.615850e-47 |
Msa0090390 | Msa1377570 | 0.806637 | 7.469460e-50 | -8.615850e-47 |
Msa0090390 | Msa1393800 | 0.806521 | 7.899885e-50 | -8.615850e-47 |
Msa0090390 | Msa1398090 | 0.806441 | 8.213292e-50 | -8.615850e-47 |
Msa0090390 | Msa1401460 | 0.804135 | 2.497418e-49 | -8.615850e-47 |
Msa0090390 | Msa1410420 | 0.803906 | 2.786823e-49 | -8.615850e-47 |
Msa0090390 | Msa1412930 | -0.820803 | 5.654392e-53 | -8.615850e-47 |
Msa0090390 | Msa1420250 | 0.810825 | 9.505436e-51 | -8.615850e-47 |
Msa0090390 | Msa1420270 | 0.836881 | 7.216165e-57 | -8.615850e-47 |
Msa0090390 | Msa1422840 | 0.831318 | 1.787159e-55 | -8.615850e-47 |
Msa0090390 | Msa1423820 | 0.807611 | 4.645958e-50 | -8.615850e-47 |
Msa0090390 | Msa1424630 | 0.810046 | 1.400299e-50 | -8.615850e-47 |
Msa0090390 | Msa1426570 | 0.814940 | 1.192372e-51 | -8.615850e-47 |
Msa0090390 | Msa1426910 | 0.809795 | 1.585584e-50 | -8.615850e-47 |
Msa0090390 | Msa1428780 | 0.801710 | 7.920303e-49 | -8.615850e-47 |
Msa0090390 | Msa1433220 | 0.825688 | 4.089483e-54 | -8.615850e-47 |
Msa0090390 | Msa1435400 | 0.808962 | 2.392637e-50 | -8.615850e-47 |
Msa0090390 | Msa1437720 | 0.819102 | 1.385179e-52 | -8.615850e-47 |
Msa0090390 | Msa1443610 | 0.983525 | 5.571700e-158 | -8.615850e-47 |
Msa0090390 | Msa1444260 | 0.822471 | 2.326859e-53 | -8.615850e-47 |
Msa0090390 | Msa1448770 | 0.803712 | 3.058149e-49 | -8.615850e-47 |
Msa0090390 | Msa1449350 | -0.805544 | 1.268192e-49 | -8.615850e-47 |
Msa0090390 | Msa1454530 | 0.805811 | 1.114717e-49 | -8.615850e-47 |
Msa0090390 | Msa1458340 | 0.807918 | 3.997029e-50 | -8.615850e-47 |
Msa0090390 | Msa1459760 | -0.815193 | 1.047932e-51 | -8.615850e-47 |
Msa0090390 | Msa1463600 | 0.824622 | 7.306918e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0090390 | MtrunA17_Chr1g0210291 | 97.324 | 598 | 12 | 2 | 1 | 597 | 1 | 595 | 0.0 | 1171 |
Msa0090390 | MtrunA17_Chr1g0210274 | 75.258 | 582 | 138 | 3 | 11 | 591 | 12 | 588 | 0.0 | 879 |
Msa0090390 | MtrunA17_Chr1g0210284 | 73.630 | 584 | 142 | 3 | 11 | 593 | 12 | 584 | 0.0 | 865 |
Msa0090390 | MtrunA17_Chr7g0264861 | 63.946 | 588 | 197 | 6 | 14 | 591 | 18 | 600 | 0.0 | 732 |
Msa0090390 | MtrunA17_Chr1g0171591 | 59.138 | 580 | 227 | 3 | 12 | 584 | 11 | 587 | 0.0 | 679 |
Msa0090390 | MtrunA17_Chr1g0174101 | 56.228 | 578 | 240 | 3 | 12 | 585 | 11 | 579 | 0.0 | 652 |
Msa0090390 | MtrunA17_Chr2g0330551 | 34.159 | 565 | 321 | 7 | 22 | 566 | 4 | 537 | 1.39e-104 | 326 |
Msa0090390 | MtrunA17_Chr7g0225191 | 35.395 | 582 | 335 | 11 | 11 | 557 | 1 | 576 | 5.72e-102 | 321 |
Msa0090390 | MtrunA17_Chr5g0442481 | 32.849 | 551 | 334 | 5 | 25 | 567 | 11 | 533 | 1.39e-97 | 308 |
Msa0090390 | MtrunA17_Chr3g0132161 | 34.650 | 557 | 324 | 12 | 25 | 558 | 15 | 554 | 2.22e-92 | 295 |
Msa0090390 | MtrunA17_Chr4g0037301 | 33.215 | 563 | 304 | 10 | 25 | 558 | 15 | 534 | 4.54e-87 | 281 |
Msa0090390 | MtrunA17_Chr5g0405621 | 31.455 | 550 | 338 | 8 | 25 | 569 | 13 | 528 | 4.93e-81 | 265 |
Msa0090390 | MtrunA17_Chr4g0064981 | 30.228 | 569 | 340 | 12 | 26 | 558 | 12 | 559 | 1.65e-74 | 248 |
Msa0090390 | MtrunA17_Chr2g0304561 | 30.411 | 559 | 345 | 10 | 26 | 558 | 13 | 553 | 2.33e-74 | 248 |
Msa0090390 | MtrunA17_Chr2g0333371 | 33.624 | 229 | 109 | 5 | 330 | 558 | 104 | 289 | 2.73e-32 | 126 |
Msa0090390 | MtrunA17_Chr7g0251871 | 25.397 | 567 | 388 | 14 | 25 | 569 | 7 | 560 | 1.25e-28 | 120 |
Msa0090390 | MtrunA17_Chr3g0106801 | 26.654 | 544 | 358 | 13 | 22 | 558 | 4 | 513 | 8.82e-27 | 114 |
Msa0090390 | MtrunA17_Chr5g0408921 | 25.739 | 575 | 378 | 15 | 25 | 566 | 7 | 565 | 9.72e-25 | 108 |
Msa0090390 | MtrunA17_Chr8g0369621 | 23.881 | 603 | 406 | 17 | 7 | 572 | 27 | 613 | 2.21e-20 | 95.1 |
Msa0090390 | MtrunA17_Chr3g0106821 | 27.415 | 383 | 250 | 10 | 23 | 398 | 5 | 366 | 2.91e-19 | 90.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0090390 | AT2G39210.1 | 67.986 | 556 | 176 | 2 | 15 | 568 | 11 | 566 | 0.0 | 776 |
Msa0090390 | AT2G28120.1 | 59.792 | 577 | 228 | 2 | 12 | 587 | 4 | 577 | 0.0 | 692 |
Msa0090390 | AT1G74780.1 | 36.380 | 569 | 307 | 9 | 19 | 568 | 1 | 533 | 2.92e-110 | 341 |
Msa0090390 | AT5G14120.1 | 34.589 | 584 | 347 | 8 | 12 | 567 | 3 | 579 | 5.83e-102 | 321 |
Msa0090390 | AT1G18940.1 | 34.358 | 553 | 309 | 7 | 20 | 558 | 4 | 516 | 1.93e-101 | 318 |
Msa0090390 | AT2G34355.1 | 34.698 | 562 | 309 | 10 | 19 | 564 | 1 | 520 | 2.42e-97 | 307 |
Msa0090390 | AT3G01930.2 | 33.107 | 589 | 350 | 9 | 14 | 567 | 5 | 584 | 2.92e-97 | 309 |
Msa0090390 | AT5G50630.1 | 34.489 | 548 | 319 | 9 | 21 | 557 | 12 | 530 | 9.30e-97 | 306 |
Msa0090390 | AT5G50520.1 | 34.489 | 548 | 319 | 9 | 21 | 557 | 12 | 530 | 9.30e-97 | 306 |
Msa0090390 | AT4G34950.1 | 33.979 | 568 | 341 | 8 | 25 | 576 | 16 | 565 | 1.10e-95 | 304 |
Msa0090390 | AT2G34350.1 | 34.107 | 560 | 305 | 7 | 25 | 564 | 7 | 522 | 1.24e-95 | 303 |
Msa0090390 | AT2G34350.2 | 34.107 | 560 | 305 | 7 | 25 | 564 | 7 | 522 | 1.24e-95 | 303 |
Msa0090390 | AT2G16660.1 | 35.009 | 537 | 324 | 6 | 25 | 557 | 14 | 529 | 5.92e-91 | 291 |
Msa0090390 | AT3G01930.1 | 31.875 | 480 | 283 | 9 | 123 | 567 | 1 | 471 | 9.11e-69 | 231 |
Msa0090390 | AT1G80530.1 | 28.909 | 550 | 355 | 10 | 26 | 558 | 14 | 544 | 2.61e-67 | 229 |
Msa0090390 | AT3G01930.3 | 32.723 | 437 | 253 | 7 | 14 | 415 | 5 | 435 | 1.38e-63 | 216 |
Msa0090390 | AT2G34355.2 | 33.090 | 411 | 225 | 8 | 162 | 564 | 2 | 370 | 7.71e-60 | 204 |
Msa0090390 | AT2G16660.2 | 34.536 | 388 | 238 | 5 | 25 | 408 | 14 | 389 | 2.52e-59 | 203 |
Msa0090390 | AT3G01630.2 | 23.732 | 552 | 373 | 13 | 25 | 558 | 41 | 562 | 1.41e-27 | 117 |
Msa0090390 | AT3G01630.1 | 23.732 | 552 | 373 | 13 | 25 | 558 | 23 | 544 | 1.47e-27 | 117 |
Msa0090390 | AT4G19450.1 | 25.314 | 557 | 338 | 16 | 25 | 533 | 7 | 533 | 8.29e-25 | 109 |
Msa0090390 | AT1G31470.1 | 22.456 | 570 | 394 | 13 | 25 | 579 | 43 | 579 | 8.15e-24 | 106 |
Msa0090390 | AT2G30300.1 | 25.853 | 557 | 322 | 18 | 26 | 558 | 8 | 497 | 4.38e-21 | 97.4 |
Msa0090390 | AT4G19450.2 | 25.962 | 416 | 254 | 10 | 25 | 401 | 7 | 407 | 1.06e-20 | 95.5 |
Msa0090390 | AT5G45275.1 | 30.688 | 189 | 128 | 2 | 25 | 212 | 7 | 193 | 1.03e-16 | 84.0 |
Find 101 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCCTCTCTTGCCGTCATTT+TGG | 0.200061 | 1_2:-72379932 | None:intergenic |
TTGTTTCATTAGTGAGTATT+TGG | 0.206900 | 1_2:+72379340 | Msa0090390:CDS |
GGTTCCCTTCTTAATTTCTT+TGG | 0.239197 | 1_2:+72378472 | Msa0090390:CDS |
AAAAGGAGTACAAAGAAAAT+TGG | 0.243039 | 1_2:+72379713 | Msa0090390:CDS |
ATTGATAATTTAGGTCAAAT+TGG | 0.249106 | 1_2:+72379279 | Msa0090390:CDS |
TCTTTGGTTACTTCATGATA+TGG | 0.251877 | 1_2:+72378488 | Msa0090390:CDS |
ACCAAACAACTCCGAAATTA+TGG | 0.265190 | 1_2:-72379568 | None:intergenic |
TTAACAGCAATTGATAATTT+AGG | 0.275096 | 1_2:+72379270 | Msa0090390:CDS |
ATCACTGCAGCTACTTTGTT+TGG | 0.283099 | 1_2:+72379789 | Msa0090390:CDS |
ATAAGCAAAATCAAAGCTTT+TGG | 0.288180 | 1_2:-72378733 | None:intergenic |
AAGAGGCAATTGATTGAAAA+AGG | 0.294262 | 1_2:+72379696 | Msa0090390:CDS |
TTTCTAATCATGTCAGCTTC+AGG | 0.321020 | 1_2:+72378283 | Msa0090390:CDS |
CAACACAACACCACGAGTTT+CGG | 0.323314 | 1_2:-72378635 | None:intergenic |
CCTTATGTTGTTCTTGCAAT+TGG | 0.327850 | 1_2:+72378451 | Msa0090390:CDS |
AACACAACACCACGAGTTTC+GGG | 0.327978 | 1_2:-72378634 | None:intergenic |
AGACACATTTGCCAAACTTT+TGG | 0.333591 | 1_2:-72378538 | None:intergenic |
GTAAAATCTTCACCTTGTTC+AGG | 0.335258 | 1_2:-72379174 | None:intergenic |
ATGTGTCTTTACATTTGTAT+AGG | 0.337463 | 1_2:+72378553 | Msa0090390:CDS |
AAAGGTTATGTTGGTCTTAG+TGG | 0.349558 | 1_2:+72378667 | Msa0090390:CDS |
ATGTTATTGCTATTCTTTGC+TGG | 0.355922 | 1_2:+72379225 | Msa0090390:CDS |
GTTAAGAGTTGTTTGGTCAT+AGG | 0.356138 | 1_2:-72378356 | None:intergenic |
CACTAAAATAAGTGAAATAA+TGG | 0.361527 | 1_2:-72379814 | None:intergenic |
AAATACCAAAACCAAAAGTT+TGG | 0.367844 | 1_2:+72378527 | Msa0090390:CDS |
TATATTTCACTTGGTCTAGC+TGG | 0.381529 | 1_2:+72378859 | Msa0090390:CDS |
GCCATAATTTCGGAGTTGTT+TGG | 0.394992 | 1_2:+72379567 | Msa0090390:CDS |
ATAGCCTTTGATGTGCAAAA+TGG | 0.396133 | 1_2:+72379483 | Msa0090390:CDS |
TTTCTTAATGTTAGGGTCGC+TGG | 0.402287 | 1_2:+72379651 | Msa0090390:CDS |
TATTCAACTTTGATGAACTT+TGG | 0.405251 | 1_2:+72379600 | Msa0090390:CDS |
TCAGGAGCCACCTACATGTT+TGG | 0.407429 | 1_2:+72378301 | Msa0090390:CDS |
GAAACTCGTGGTGTTGTGTT+GGG | 0.407607 | 1_2:+72378637 | Msa0090390:CDS |
ATAACATATCTATGCTGAAA+AGG | 0.416968 | 1_2:-72379209 | None:intergenic |
CTTAGTTTCTTCAAAGACTT+AGG | 0.418305 | 1_2:+72378382 | Msa0090390:CDS |
TTTAAACAGAGTGAGTATAT+TGG | 0.420191 | 1_2:+72378922 | Msa0090390:CDS |
AGTTCGTTGTTCTGTTTAAC+CGG | 0.420863 | 1_2:-72378814 | None:intergenic |
GGTGGGGTAGCTAGTCCAAT+TGG | 0.428284 | 1_2:+72379621 | Msa0090390:CDS |
ACCATCGTCCTGTGATAACT+TGG | 0.430124 | 1_2:-72378243 | None:intergenic |
TAAGGAGGTTAAGAGTTGTT+TGG | 0.437311 | 1_2:-72378363 | None:intergenic |
TTAAGAAAATATAATCCAAT+TGG | 0.438575 | 1_2:-72379636 | None:intergenic |
GGACAGGAAGCAAAAGCTAC+AGG | 0.443209 | 1_2:+72379951 | Msa0090390:CDS |
AAAGGAGTACAAAGAAAATT+GGG | 0.445150 | 1_2:+72379714 | Msa0090390:CDS |
CTAAGTCTTTGAAGAAACTA+AGG | 0.454900 | 1_2:-72378381 | None:intergenic |
GGTCAAATTGGAACCTCACT+TGG | 0.457053 | 1_2:+72379291 | Msa0090390:CDS |
CTGTGATAACTTGGACTATG+AGG | 0.462020 | 1_2:-72378234 | None:intergenic |
CAACTTTGATGAACTTTGGT+GGG | 0.470861 | 1_2:+72379604 | Msa0090390:CDS |
TAACATATCTATGCTGAAAA+GGG | 0.471235 | 1_2:-72379208 | None:intergenic |
TTGTTTGAGATAACCTCAAC+GGG | 0.472230 | 1_2:-72378207 | None:intergenic |
TTTGCTGGTACATGTGGTGT+TGG | 0.472904 | 1_2:+72379240 | Msa0090390:CDS |
AAAAGAAAGGAAATTGCTGC+TGG | 0.480135 | 1_2:-72378766 | None:intergenic |
TCAGAGCAGGTTGAAGTTGA+AGG | 0.480550 | 1_2:+72379885 | Msa0090390:CDS |
CGAAACTCGTGGTGTTGTGT+TGG | 0.492392 | 1_2:+72378636 | Msa0090390:CDS |
GCTGGTACATGTGGTGTTGG+TGG | 0.500330 | 1_2:+72379243 | Msa0090390:CDS |
GACACCAAAATGGCGGTTGA+AGG | 0.501902 | 1_2:+72378178 | None:intergenic |
TATATGACAAAGAAGCTAAG+AGG | 0.509800 | 1_2:+72379679 | Msa0090390:CDS |
AGTTGTTTGGTCATAGGCTA+AGG | 0.514651 | 1_2:-72378350 | None:intergenic |
AACCATTCGATACATGAAAC+CGG | 0.515497 | 1_2:+72378795 | Msa0090390:CDS |
CTATTCTTTGCTGGTACATG+TGG | 0.516615 | 1_2:+72379234 | Msa0090390:CDS |
AACCGGTTTCATGTATCGAA+TGG | 0.520822 | 1_2:-72378797 | None:intergenic |
AGTACAAAGAAAATTGGGTC+AGG | 0.524550 | 1_2:+72379719 | Msa0090390:CDS |
CCAATTGCAAGAACAACATA+AGG | 0.528707 | 1_2:-72378451 | None:intergenic |
AGTAACCAAAGAAATTAAGA+AGG | 0.528849 | 1_2:-72378477 | None:intergenic |
GTTAAACAGAACAACGAACT+TGG | 0.531720 | 1_2:+72378817 | Msa0090390:CDS |
TCAACTTTGATGAACTTTGG+TGG | 0.540207 | 1_2:+72379603 | Msa0090390:CDS |
TACATGTTTGGTCTTTACTC+CGG | 0.541203 | 1_2:+72378313 | Msa0090390:CDS |
TGATTACTGAAGCAAAATAG+AGG | 0.545938 | 1_2:-72379506 | None:intergenic |
AAAGACTTAGGTGGCAACCT+TGG | 0.554717 | 1_2:+72378394 | Msa0090390:CDS |
AAATGACGGCAAGAGAGGAC+AGG | 0.559480 | 1_2:+72379935 | Msa0090390:CDS |
GTGAGTATTTGGAATTACCT+AGG | 0.563575 | 1_2:+72379351 | Msa0090390:CDS |
AAACTCGTGGTGTTGTGTTG+GGG | 0.568454 | 1_2:+72378638 | Msa0090390:CDS |
TATCACAGGACGATGGTTCG+TGG | 0.571165 | 1_2:+72378249 | Msa0090390:CDS |
GTCCAAAATGACGGCAAGAG+AGG | 0.575323 | 1_2:+72379930 | Msa0090390:CDS |
CAAGAGGTACCGATCAGAGC+AGG | 0.579521 | 1_2:+72379872 | Msa0090390:CDS |
AGGAGCTACGGCTGAGATGA+CGG | 0.582623 | 1_2:+72379905 | Msa0090390:CDS |
AGTTTCTTCAAAGACTTAGG+TGG | 0.582691 | 1_2:+72378385 | Msa0090390:CDS |
AACTTTGATGAACTTTGGTG+GGG | 0.586311 | 1_2:+72379605 | Msa0090390:CDS |
AAATCTTCACCTTGTTCAGG+TGG | 0.587569 | 1_2:-72379171 | None:intergenic |
AAGAATTTCCCCGAAACTCG+TGG | 0.589952 | 1_2:+72378625 | Msa0090390:CDS |
CTCATAGTCCAAGTTATCAC+AGG | 0.590987 | 1_2:+72378235 | Msa0090390:CDS |
AAATTGTGATACTAATGCAA+TGG | 0.591899 | 1_2:+72379098 | Msa0090390:CDS |
CAACTTCAACCTGCTCTGAT+CGG | 0.592162 | 1_2:-72379881 | None:intergenic |
ATGACGGTGGTCCAAAATGA+CGG | 0.592384 | 1_2:+72379921 | Msa0090390:CDS |
GGTTGAAGTTGAAGGAGCTA+CGG | 0.593890 | 1_2:+72379893 | Msa0090390:CDS |
AATGTGAACATGAGTGGTCG+TGG | 0.597649 | 1_2:-72379426 | None:intergenic |
CAAAGACAACAGCAAGAGGT+AGG | 0.598117 | 1_2:-72378975 | None:intergenic |
GGTCAGGAATTGAATTGTGT+AGG | 0.604873 | 1_2:+72379735 | Msa0090390:CDS |
TATCAATAAGTGACCGACAC+AGG | 0.607344 | 1_2:-72379463 | None:intergenic |
TCAACAAAGACAACAGCAAG+AGG | 0.609098 | 1_2:-72378979 | None:intergenic |
GACAGGAAGCAAAAGCTACA+GGG | 0.610641 | 1_2:+72379952 | Msa0090390:CDS |
TTTGTTTGAGATAACCTCAA+CGG | 0.614309 | 1_2:-72378208 | None:intergenic |
GTAACCAAAGAAATTAAGAA+GGG | 0.616373 | 1_2:-72378476 | None:intergenic |
TTGAAGGTGTAAGCCCGTTG+AGG | 0.620655 | 1_2:+72378194 | Msa0090390:CDS |
AGTCTTTGAAGAAACTAAGG+AGG | 0.622224 | 1_2:-72378378 | None:intergenic |
ATAATCAATGTGAACATGAG+TGG | 0.627737 | 1_2:-72379432 | None:intergenic |
AAAGAAAGGAAATTGCTGCT+GGG | 0.629241 | 1_2:-72378765 | None:intergenic |
GGAGTAAAGACCAAACATGT+AGG | 0.637378 | 1_2:-72378311 | None:intergenic |
ATAAAGGTGATATATACAAG+AGG | 0.658630 | 1_2:+72379856 | Msa0090390:CDS |
ACACAACACCACGAGTTTCG+GGG | 0.681069 | 1_2:-72378633 | None:intergenic |
GTAAAGACCAAACATGTAGG+TGG | 0.688543 | 1_2:-72378308 | None:intergenic |
ATTGCAAGAACAACATAAGG+CGG | 0.705972 | 1_2:-72378448 | None:intergenic |
TCCAAGTTATCACAGGACGA+TGG | 0.708132 | 1_2:+72378242 | Msa0090390:CDS |
AGCTACGGCTGAGATGACGG+TGG | 0.773314 | 1_2:+72379908 | Msa0090390:CDS |
TTAAGCCAGAGAAAACACCA+AGG | 0.797705 | 1_2:-72378411 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTATATTTTCTTAATGTTA+GGG | + | chr1_2:72379644-72379663 | Msa0090390:CDS | 10.0% |
!!! | ATTATATTTTCTTAATGTTA+GGG | + | chr1_2:72379644-72379663 | Msa0090390:CDS | 10.0% |
!! | TTAAGAAAATATAATCCAAT+TGG | - | chr1_2:72379639-72379658 | None:intergenic | 15.0% |
!!! | GATTATATTTTCTTAATGTT+AGG | + | chr1_2:72379643-72379662 | Msa0090390:CDS | 15.0% |
!!! | AGAACAATTAAGTTTTATAA+AGG | + | chr1_2:72379840-72379859 | Msa0090390:CDS | 15.0% |
!! | TTAAGAAAATATAATCCAAT+TGG | - | chr1_2:72379639-72379658 | None:intergenic | 15.0% |
!!! | GATTATATTTTCTTAATGTT+AGG | + | chr1_2:72379643-72379662 | Msa0090390:CDS | 15.0% |
!!! | AGAACAATTAAGTTTTATAA+AGG | + | chr1_2:72379840-72379859 | Msa0090390:CDS | 15.0% |
!!! | AAGTTTTTGTATATTTCACT+TGG | + | chr1_2:72378850-72378869 | Msa0090390:CDS | 20.0% |
!!! | TTAACAGCAATTGATAATTT+AGG | + | chr1_2:72379270-72379289 | Msa0090390:CDS | 20.0% |
!!! | ATTGATAATTTAGGTCAAAT+TGG | + | chr1_2:72379279-72379298 | Msa0090390:CDS | 20.0% |
!! | CACTAAAATAAGTGAAATAA+TGG | - | chr1_2:72379817-72379836 | None:intergenic | 20.0% |
!!! | CATTATTTCACTTATTTTAG+TGG | + | chr1_2:72379815-72379834 | Msa0090390:CDS | 20.0% |
!!! | AAGTTTTTGTATATTTCACT+TGG | + | chr1_2:72378850-72378869 | Msa0090390:CDS | 20.0% |
!!! | TTAACAGCAATTGATAATTT+AGG | + | chr1_2:72379270-72379289 | Msa0090390:CDS | 20.0% |
!!! | ATTGATAATTTAGGTCAAAT+TGG | + | chr1_2:72379279-72379298 | Msa0090390:CDS | 20.0% |
!! | CACTAAAATAAGTGAAATAA+TGG | - | chr1_2:72379817-72379836 | None:intergenic | 20.0% |
!!! | CATTATTTCACTTATTTTAG+TGG | + | chr1_2:72379815-72379834 | Msa0090390:CDS | 20.0% |
! | GTAACCAAAGAAATTAAGAA+GGG | - | chr1_2:72378479-72378498 | None:intergenic | 25.0% |
! | AGTAACCAAAGAAATTAAGA+AGG | - | chr1_2:72378480-72378499 | None:intergenic | 25.0% |
! | AAATACCAAAACCAAAAGTT+TGG | + | chr1_2:72378527-72378546 | Msa0090390:CDS | 25.0% |
! | ATGTGTCTTTACATTTGTAT+AGG | + | chr1_2:72378553-72378572 | Msa0090390:CDS | 25.0% |
!! | ATAAGCAAAATCAAAGCTTT+TGG | - | chr1_2:72378736-72378755 | None:intergenic | 25.0% |
! | AATGGTTCGAATAAAAAGAA+AGG | - | chr1_2:72378782-72378801 | None:intergenic | 25.0% |
! | TTTAAACAGAGTGAGTATAT+TGG | + | chr1_2:72378922-72378941 | Msa0090390:CDS | 25.0% |
!!! | GTTACTATTTTAACCGAAAA+TGG | - | chr1_2:72379048-72379067 | None:intergenic | 25.0% |
! | AAATTGTGATACTAATGCAA+TGG | + | chr1_2:72379098-72379117 | Msa0090390:CDS | 25.0% |
! | TTGAACAAAAAGAAACTAGA+TGG | + | chr1_2:72379130-72379149 | Msa0090390:CDS | 25.0% |
! | TAACATATCTATGCTGAAAA+GGG | - | chr1_2:72379211-72379230 | None:intergenic | 25.0% |
! | ATAACATATCTATGCTGAAA+AGG | - | chr1_2:72379212-72379231 | None:intergenic | 25.0% |
! | TTGTTTCATTAGTGAGTATT+TGG | + | chr1_2:72379340-72379359 | Msa0090390:CDS | 25.0% |
!!! | ATTATGTTTTTATCCTGTGT+CGG | + | chr1_2:72379450-72379469 | Msa0090390:CDS | 25.0% |
!! | TATTTTGCTTCAGTAATCAT+TGG | + | chr1_2:72379510-72379529 | Msa0090390:CDS | 25.0% |
!!! | GTAATCATTGGATTTTGTTT+TGG | + | chr1_2:72379522-72379541 | Msa0090390:CDS | 25.0% |
!!! | ATTGGTTTTTGCCATAATTT+CGG | + | chr1_2:72379557-72379576 | Msa0090390:CDS | 25.0% |
! | TATTCAACTTTGATGAACTT+TGG | + | chr1_2:72379600-72379619 | Msa0090390:CDS | 25.0% |
!! | AAAAGGAGTACAAAGAAAAT+TGG | + | chr1_2:72379713-72379732 | Msa0090390:CDS | 25.0% |
!! | AAAGGAGTACAAAGAAAATT+GGG | + | chr1_2:72379714-72379733 | Msa0090390:CDS | 25.0% |
! | ATAAAGGTGATATATACAAG+AGG | + | chr1_2:72379856-72379875 | Msa0090390:CDS | 25.0% |
! | GTAACCAAAGAAATTAAGAA+GGG | - | chr1_2:72378479-72378498 | None:intergenic | 25.0% |
! | AGTAACCAAAGAAATTAAGA+AGG | - | chr1_2:72378480-72378499 | None:intergenic | 25.0% |
! | AAATACCAAAACCAAAAGTT+TGG | + | chr1_2:72378527-72378546 | Msa0090390:CDS | 25.0% |
! | ATGTGTCTTTACATTTGTAT+AGG | + | chr1_2:72378553-72378572 | Msa0090390:CDS | 25.0% |
!! | ATAAGCAAAATCAAAGCTTT+TGG | - | chr1_2:72378736-72378755 | None:intergenic | 25.0% |
! | AATGGTTCGAATAAAAAGAA+AGG | - | chr1_2:72378782-72378801 | None:intergenic | 25.0% |
! | TTTAAACAGAGTGAGTATAT+TGG | + | chr1_2:72378922-72378941 | Msa0090390:CDS | 25.0% |
!!! | GTTACTATTTTAACCGAAAA+TGG | - | chr1_2:72379048-72379067 | None:intergenic | 25.0% |
! | AAATTGTGATACTAATGCAA+TGG | + | chr1_2:72379098-72379117 | Msa0090390:CDS | 25.0% |
! | TTGAACAAAAAGAAACTAGA+TGG | + | chr1_2:72379130-72379149 | Msa0090390:CDS | 25.0% |
! | TAACATATCTATGCTGAAAA+GGG | - | chr1_2:72379211-72379230 | None:intergenic | 25.0% |
! | ATAACATATCTATGCTGAAA+AGG | - | chr1_2:72379212-72379231 | None:intergenic | 25.0% |
! | TTGTTTCATTAGTGAGTATT+TGG | + | chr1_2:72379340-72379359 | Msa0090390:CDS | 25.0% |
!!! | ATTATGTTTTTATCCTGTGT+CGG | + | chr1_2:72379450-72379469 | Msa0090390:CDS | 25.0% |
!! | TATTTTGCTTCAGTAATCAT+TGG | + | chr1_2:72379510-72379529 | Msa0090390:CDS | 25.0% |
!!! | GTAATCATTGGATTTTGTTT+TGG | + | chr1_2:72379522-72379541 | Msa0090390:CDS | 25.0% |
!!! | ATTGGTTTTTGCCATAATTT+CGG | + | chr1_2:72379557-72379576 | Msa0090390:CDS | 25.0% |
! | TATTCAACTTTGATGAACTT+TGG | + | chr1_2:72379600-72379619 | Msa0090390:CDS | 25.0% |
!! | AAAAGGAGTACAAAGAAAAT+TGG | + | chr1_2:72379713-72379732 | Msa0090390:CDS | 25.0% |
!! | AAAGGAGTACAAAGAAAATT+GGG | + | chr1_2:72379714-72379733 | Msa0090390:CDS | 25.0% |
! | ATAAAGGTGATATATACAAG+AGG | + | chr1_2:72379856-72379875 | Msa0090390:CDS | 25.0% |
! | TTTGTTTGAGATAACCTCAA+CGG | - | chr1_2:72378211-72378230 | None:intergenic | 30.0% |
!! | TAAGGATGTTTTTATGGTAC+CGG | - | chr1_2:72378335-72378354 | None:intergenic | 30.0% |
!! | ATAGGCTAAGGATGTTTTTA+TGG | - | chr1_2:72378341-72378360 | None:intergenic | 30.0% |
! | CTAAGTCTTTGAAGAAACTA+AGG | - | chr1_2:72378384-72378403 | None:intergenic | 30.0% |
CTTAGTTTCTTCAAAGACTT+AGG | + | chr1_2:72378382-72378401 | Msa0090390:CDS | 30.0% | |
TCTTTGGTTACTTCATGATA+TGG | + | chr1_2:72378488-72378507 | Msa0090390:CDS | 30.0% | |
!!! | ATTTGCCAAACTTTTGGTTT+TGG | - | chr1_2:72378535-72378554 | None:intergenic | 30.0% |
!! | GGGATTTTAAAAGGTTATGT+TGG | + | chr1_2:72378658-72378677 | Msa0090390:CDS | 30.0% |
!! | CTTTGATTTTGCTTATTGCT+TGG | + | chr1_2:72378740-72378759 | Msa0090390:CDS | 30.0% |
AACAAAAAGAAACTAGATGG+TGG | + | chr1_2:72379133-72379152 | Msa0090390:CDS | 30.0% | |
! | ATGTTATTGCTATTCTTTGC+TGG | + | chr1_2:72379225-72379244 | Msa0090390:CDS | 30.0% |
!! | ATGTGCTTATGCTTGTTTTT+GGG | - | chr1_2:72379320-72379339 | None:intergenic | 30.0% |
!! | AATGTGCTTATGCTTGTTTT+TGG | - | chr1_2:72379321-72379340 | None:intergenic | 30.0% |
ATAATCAATGTGAACATGAG+TGG | - | chr1_2:72379435-72379454 | None:intergenic | 30.0% | |
TGATTACTGAAGCAAAATAG+AGG | - | chr1_2:72379509-72379528 | None:intergenic | 30.0% | |
GAAATTATGGCAAAAACCAA+TGG | - | chr1_2:72379558-72379577 | None:intergenic | 30.0% | |
TATATGACAAAGAAGCTAAG+AGG | + | chr1_2:72379679-72379698 | Msa0090390:CDS | 30.0% | |
AAGAGGCAATTGATTGAAAA+AGG | + | chr1_2:72379696-72379715 | Msa0090390:CDS | 30.0% | |
! | TTTGTTTGAGATAACCTCAA+CGG | - | chr1_2:72378211-72378230 | None:intergenic | 30.0% |
!! | TAAGGATGTTTTTATGGTAC+CGG | - | chr1_2:72378335-72378354 | None:intergenic | 30.0% |
!! | ATAGGCTAAGGATGTTTTTA+TGG | - | chr1_2:72378341-72378360 | None:intergenic | 30.0% |
! | CTAAGTCTTTGAAGAAACTA+AGG | - | chr1_2:72378384-72378403 | None:intergenic | 30.0% |
CTTAGTTTCTTCAAAGACTT+AGG | + | chr1_2:72378382-72378401 | Msa0090390:CDS | 30.0% | |
TCTTTGGTTACTTCATGATA+TGG | + | chr1_2:72378488-72378507 | Msa0090390:CDS | 30.0% | |
!!! | ATTTGCCAAACTTTTGGTTT+TGG | - | chr1_2:72378535-72378554 | None:intergenic | 30.0% |
!! | GGGATTTTAAAAGGTTATGT+TGG | + | chr1_2:72378658-72378677 | Msa0090390:CDS | 30.0% |
!! | CTTTGATTTTGCTTATTGCT+TGG | + | chr1_2:72378740-72378759 | Msa0090390:CDS | 30.0% |
AACAAAAAGAAACTAGATGG+TGG | + | chr1_2:72379133-72379152 | Msa0090390:CDS | 30.0% | |
! | ATGTTATTGCTATTCTTTGC+TGG | + | chr1_2:72379225-72379244 | Msa0090390:CDS | 30.0% |
!! | ATGTGCTTATGCTTGTTTTT+GGG | - | chr1_2:72379320-72379339 | None:intergenic | 30.0% |
!! | AATGTGCTTATGCTTGTTTT+TGG | - | chr1_2:72379321-72379340 | None:intergenic | 30.0% |
ATAATCAATGTGAACATGAG+TGG | - | chr1_2:72379435-72379454 | None:intergenic | 30.0% | |
TGATTACTGAAGCAAAATAG+AGG | - | chr1_2:72379509-72379528 | None:intergenic | 30.0% | |
GAAATTATGGCAAAAACCAA+TGG | - | chr1_2:72379558-72379577 | None:intergenic | 30.0% | |
TATATGACAAAGAAGCTAAG+AGG | + | chr1_2:72379679-72379698 | Msa0090390:CDS | 30.0% | |
AAGAGGCAATTGATTGAAAA+AGG | + | chr1_2:72379696-72379715 | Msa0090390:CDS | 30.0% | |
! | TTGTTTGAGATAACCTCAAC+GGG | - | chr1_2:72378210-72378229 | None:intergenic | 35.0% |
TTTCTAATCATGTCAGCTTC+AGG | + | chr1_2:72378283-72378302 | Msa0090390:CDS | 35.0% | |
! | TACATGTTTGGTCTTTACTC+CGG | + | chr1_2:72378313-72378332 | Msa0090390:CDS | 35.0% |
GTTAAGAGTTGTTTGGTCAT+AGG | - | chr1_2:72378359-72378378 | None:intergenic | 35.0% | |
TAAGGAGGTTAAGAGTTGTT+TGG | - | chr1_2:72378366-72378385 | None:intergenic | 35.0% | |
! | AGTCTTTGAAGAAACTAAGG+AGG | - | chr1_2:72378381-72378400 | None:intergenic | 35.0% |
AGTTTCTTCAAAGACTTAGG+TGG | + | chr1_2:72378385-72378404 | Msa0090390:CDS | 35.0% | |
ATTGCAAGAACAACATAAGG+CGG | - | chr1_2:72378451-72378470 | None:intergenic | 35.0% | |
CCAATTGCAAGAACAACATA+AGG | - | chr1_2:72378454-72378473 | None:intergenic | 35.0% | |
CCTTATGTTGTTCTTGCAAT+TGG | + | chr1_2:72378451-72378470 | Msa0090390:CDS | 35.0% | |
GGTTCCCTTCTTAATTTCTT+TGG | + | chr1_2:72378472-72378491 | Msa0090390:CDS | 35.0% | |
! | AGACACATTTGCCAAACTTT+TGG | - | chr1_2:72378541-72378560 | None:intergenic | 35.0% |
!!! | TCTCAGTCTTTTTCAAACAC+TGG | + | chr1_2:72378583-72378602 | Msa0090390:CDS | 35.0% |
! | GTTGTGTTGGGGATTTTAAA+AGG | + | chr1_2:72378649-72378668 | Msa0090390:CDS | 35.0% |
!! | AAAGGTTATGTTGGTCTTAG+TGG | + | chr1_2:72378667-72378686 | Msa0090390:CDS | 35.0% |
AAAGAAAGGAAATTGCTGCT+GGG | - | chr1_2:72378768-72378787 | None:intergenic | 35.0% | |
AAAAGAAAGGAAATTGCTGC+TGG | - | chr1_2:72378769-72378788 | None:intergenic | 35.0% | |
AACCATTCGATACATGAAAC+CGG | + | chr1_2:72378795-72378814 | Msa0090390:CDS | 35.0% | |
AGTTCGTTGTTCTGTTTAAC+CGG | - | chr1_2:72378817-72378836 | None:intergenic | 35.0% | |
GTTAAACAGAACAACGAACT+TGG | + | chr1_2:72378817-72378836 | Msa0090390:CDS | 35.0% | |
TATATTTCACTTGGTCTAGC+TGG | + | chr1_2:72378859-72378878 | Msa0090390:CDS | 35.0% | |
!!! | TGGTCTAGCTGGTTTTTTAA+TGG | + | chr1_2:72378870-72378889 | Msa0090390:CDS | 35.0% |
! | TGCATTTGTCGATCCATTTT+CGG | + | chr1_2:72379032-72379051 | Msa0090390:CDS | 35.0% |
!!! | ATTTTTAGTCCACCTGAACA+AGG | + | chr1_2:72379162-72379181 | Msa0090390:CDS | 35.0% |
GTAAAATCTTCACCTTGTTC+AGG | - | chr1_2:72379177-72379196 | None:intergenic | 35.0% | |
! | GTGAGTATTTGGAATTACCT+AGG | + | chr1_2:72379351-72379370 | Msa0090390:CDS | 35.0% |
!!! | TACCTAGGAAGAGTTTTTTC+TGG | + | chr1_2:72379366-72379385 | Msa0090390:CDS | 35.0% |
AACCAGAAAAAACTCTTCCT+AGG | - | chr1_2:72379371-72379390 | None:intergenic | 35.0% | |
ATAGCCTTTGATGTGCAAAA+TGG | + | chr1_2:72379483-72379502 | Msa0090390:CDS | 35.0% | |
!!! | GATTTTGTTTTGGTGCACAA+TGG | + | chr1_2:72379532-72379551 | Msa0090390:CDS | 35.0% |
ACCAAACAACTCCGAAATTA+TGG | - | chr1_2:72379571-72379590 | None:intergenic | 35.0% | |
TCAACTTTGATGAACTTTGG+TGG | + | chr1_2:72379603-72379622 | Msa0090390:CDS | 35.0% | |
CAACTTTGATGAACTTTGGT+GGG | + | chr1_2:72379604-72379623 | Msa0090390:CDS | 35.0% | |
AACTTTGATGAACTTTGGTG+GGG | + | chr1_2:72379605-72379624 | Msa0090390:CDS | 35.0% | |
AGTACAAAGAAAATTGGGTC+AGG | + | chr1_2:72379719-72379738 | Msa0090390:CDS | 35.0% | |
! | TTGTTTGAGATAACCTCAAC+GGG | - | chr1_2:72378210-72378229 | None:intergenic | 35.0% |
TTTCTAATCATGTCAGCTTC+AGG | + | chr1_2:72378283-72378302 | Msa0090390:CDS | 35.0% | |
! | TACATGTTTGGTCTTTACTC+CGG | + | chr1_2:72378313-72378332 | Msa0090390:CDS | 35.0% |
GTTAAGAGTTGTTTGGTCAT+AGG | - | chr1_2:72378359-72378378 | None:intergenic | 35.0% | |
TAAGGAGGTTAAGAGTTGTT+TGG | - | chr1_2:72378366-72378385 | None:intergenic | 35.0% | |
! | AGTCTTTGAAGAAACTAAGG+AGG | - | chr1_2:72378381-72378400 | None:intergenic | 35.0% |
AGTTTCTTCAAAGACTTAGG+TGG | + | chr1_2:72378385-72378404 | Msa0090390:CDS | 35.0% | |
ATTGCAAGAACAACATAAGG+CGG | - | chr1_2:72378451-72378470 | None:intergenic | 35.0% | |
CCAATTGCAAGAACAACATA+AGG | - | chr1_2:72378454-72378473 | None:intergenic | 35.0% | |
CCTTATGTTGTTCTTGCAAT+TGG | + | chr1_2:72378451-72378470 | Msa0090390:CDS | 35.0% | |
GGTTCCCTTCTTAATTTCTT+TGG | + | chr1_2:72378472-72378491 | Msa0090390:CDS | 35.0% | |
! | AGACACATTTGCCAAACTTT+TGG | - | chr1_2:72378541-72378560 | None:intergenic | 35.0% |
!!! | TCTCAGTCTTTTTCAAACAC+TGG | + | chr1_2:72378583-72378602 | Msa0090390:CDS | 35.0% |
! | GTTGTGTTGGGGATTTTAAA+AGG | + | chr1_2:72378649-72378668 | Msa0090390:CDS | 35.0% |
!! | AAAGGTTATGTTGGTCTTAG+TGG | + | chr1_2:72378667-72378686 | Msa0090390:CDS | 35.0% |
AAAGAAAGGAAATTGCTGCT+GGG | - | chr1_2:72378768-72378787 | None:intergenic | 35.0% | |
AAAAGAAAGGAAATTGCTGC+TGG | - | chr1_2:72378769-72378788 | None:intergenic | 35.0% | |
AACCATTCGATACATGAAAC+CGG | + | chr1_2:72378795-72378814 | Msa0090390:CDS | 35.0% | |
AGTTCGTTGTTCTGTTTAAC+CGG | - | chr1_2:72378817-72378836 | None:intergenic | 35.0% | |
GTTAAACAGAACAACGAACT+TGG | + | chr1_2:72378817-72378836 | Msa0090390:CDS | 35.0% | |
TATATTTCACTTGGTCTAGC+TGG | + | chr1_2:72378859-72378878 | Msa0090390:CDS | 35.0% | |
!!! | TGGTCTAGCTGGTTTTTTAA+TGG | + | chr1_2:72378870-72378889 | Msa0090390:CDS | 35.0% |
! | TGCATTTGTCGATCCATTTT+CGG | + | chr1_2:72379032-72379051 | Msa0090390:CDS | 35.0% |
!!! | ATTTTTAGTCCACCTGAACA+AGG | + | chr1_2:72379162-72379181 | Msa0090390:CDS | 35.0% |
GTAAAATCTTCACCTTGTTC+AGG | - | chr1_2:72379177-72379196 | None:intergenic | 35.0% | |
! | GTGAGTATTTGGAATTACCT+AGG | + | chr1_2:72379351-72379370 | Msa0090390:CDS | 35.0% |
!!! | TACCTAGGAAGAGTTTTTTC+TGG | + | chr1_2:72379366-72379385 | Msa0090390:CDS | 35.0% |
AACCAGAAAAAACTCTTCCT+AGG | - | chr1_2:72379371-72379390 | None:intergenic | 35.0% | |
ATAGCCTTTGATGTGCAAAA+TGG | + | chr1_2:72379483-72379502 | Msa0090390:CDS | 35.0% | |
!!! | GATTTTGTTTTGGTGCACAA+TGG | + | chr1_2:72379532-72379551 | Msa0090390:CDS | 35.0% |
ACCAAACAACTCCGAAATTA+TGG | - | chr1_2:72379571-72379590 | None:intergenic | 35.0% | |
TCAACTTTGATGAACTTTGG+TGG | + | chr1_2:72379603-72379622 | Msa0090390:CDS | 35.0% | |
CAACTTTGATGAACTTTGGT+GGG | + | chr1_2:72379604-72379623 | Msa0090390:CDS | 35.0% | |
AACTTTGATGAACTTTGGTG+GGG | + | chr1_2:72379605-72379624 | Msa0090390:CDS | 35.0% | |
AGTACAAAGAAAATTGGGTC+AGG | + | chr1_2:72379719-72379738 | Msa0090390:CDS | 35.0% | |
CTGTGATAACTTGGACTATG+AGG | - | chr1_2:72378237-72378256 | None:intergenic | 40.0% | |
CTCATAGTCCAAGTTATCAC+AGG | + | chr1_2:72378235-72378254 | Msa0090390:CDS | 40.0% | |
GTAAAGACCAAACATGTAGG+TGG | - | chr1_2:72378311-72378330 | None:intergenic | 40.0% | |
GGAGTAAAGACCAAACATGT+AGG | - | chr1_2:72378314-72378333 | None:intergenic | 40.0% | |
AGTTGTTTGGTCATAGGCTA+AGG | - | chr1_2:72378353-72378372 | None:intergenic | 40.0% | |
TTAAGCCAGAGAAAACACCA+AGG | - | chr1_2:72378414-72378433 | None:intergenic | 40.0% | |
! | AACCGGTTTCATGTATCGAA+TGG | - | chr1_2:72378800-72378819 | None:intergenic | 40.0% |
TCAACAAAGACAACAGCAAG+AGG | - | chr1_2:72378982-72379001 | None:intergenic | 40.0% | |
AAATCTTCACCTTGTTCAGG+TGG | - | chr1_2:72379174-72379193 | None:intergenic | 40.0% | |
CTATTCTTTGCTGGTACATG+TGG | + | chr1_2:72379234-72379253 | Msa0090390:CDS | 40.0% | |
!!! | TGTTTTTGGGTATCCAAGTG+AGG | - | chr1_2:72379307-72379326 | None:intergenic | 40.0% |
TATCAATAAGTGACCGACAC+AGG | - | chr1_2:72379466-72379485 | None:intergenic | 40.0% | |
GCCATAATTTCGGAGTTGTT+TGG | + | chr1_2:72379567-72379586 | Msa0090390:CDS | 40.0% | |
TTTCTTAATGTTAGGGTCGC+TGG | + | chr1_2:72379651-72379670 | Msa0090390:CDS | 40.0% | |
GGTCAGGAATTGAATTGTGT+AGG | + | chr1_2:72379735-72379754 | Msa0090390:CDS | 40.0% | |
! | ATCACTGCAGCTACTTTGTT+TGG | + | chr1_2:72379789-72379808 | Msa0090390:CDS | 40.0% |
CTGTGATAACTTGGACTATG+AGG | - | chr1_2:72378237-72378256 | None:intergenic | 40.0% | |
CTCATAGTCCAAGTTATCAC+AGG | + | chr1_2:72378235-72378254 | Msa0090390:CDS | 40.0% | |
GTAAAGACCAAACATGTAGG+TGG | - | chr1_2:72378311-72378330 | None:intergenic | 40.0% | |
GGAGTAAAGACCAAACATGT+AGG | - | chr1_2:72378314-72378333 | None:intergenic | 40.0% | |
AGTTGTTTGGTCATAGGCTA+AGG | - | chr1_2:72378353-72378372 | None:intergenic | 40.0% | |
TTAAGCCAGAGAAAACACCA+AGG | - | chr1_2:72378414-72378433 | None:intergenic | 40.0% | |
! | AACCGGTTTCATGTATCGAA+TGG | - | chr1_2:72378800-72378819 | None:intergenic | 40.0% |
TCAACAAAGACAACAGCAAG+AGG | - | chr1_2:72378982-72379001 | None:intergenic | 40.0% | |
AAATCTTCACCTTGTTCAGG+TGG | - | chr1_2:72379174-72379193 | None:intergenic | 40.0% | |
CTATTCTTTGCTGGTACATG+TGG | + | chr1_2:72379234-72379253 | Msa0090390:CDS | 40.0% | |
!!! | TGTTTTTGGGTATCCAAGTG+AGG | - | chr1_2:72379307-72379326 | None:intergenic | 40.0% |
TATCAATAAGTGACCGACAC+AGG | - | chr1_2:72379466-72379485 | None:intergenic | 40.0% | |
GCCATAATTTCGGAGTTGTT+TGG | + | chr1_2:72379567-72379586 | Msa0090390:CDS | 40.0% | |
TTTCTTAATGTTAGGGTCGC+TGG | + | chr1_2:72379651-72379670 | Msa0090390:CDS | 40.0% | |
GGTCAGGAATTGAATTGTGT+AGG | + | chr1_2:72379735-72379754 | Msa0090390:CDS | 40.0% | |
! | ATCACTGCAGCTACTTTGTT+TGG | + | chr1_2:72379789-72379808 | Msa0090390:CDS | 40.0% |
TCCAAGTTATCACAGGACGA+TGG | + | chr1_2:72378242-72378261 | Msa0090390:CDS | 45.0% | |
ACCATCGTCCTGTGATAACT+TGG | - | chr1_2:72378246-72378265 | None:intergenic | 45.0% | |
AAAGACTTAGGTGGCAACCT+TGG | + | chr1_2:72378394-72378413 | Msa0090390:CDS | 45.0% | |
AAGAATTTCCCCGAAACTCG+TGG | + | chr1_2:72378625-72378644 | Msa0090390:CDS | 45.0% | |
AACACAACACCACGAGTTTC+GGG | - | chr1_2:72378637-72378656 | None:intergenic | 45.0% | |
CAACACAACACCACGAGTTT+CGG | - | chr1_2:72378638-72378657 | None:intergenic | 45.0% | |
!! | GAAACTCGTGGTGTTGTGTT+GGG | + | chr1_2:72378637-72378656 | Msa0090390:CDS | 45.0% |
!! | AAACTCGTGGTGTTGTGTTG+GGG | + | chr1_2:72378638-72378657 | Msa0090390:CDS | 45.0% |
CAAAGACAACAGCAAGAGGT+AGG | - | chr1_2:72378978-72378997 | None:intergenic | 45.0% | |
TTTGCTGGTACATGTGGTGT+TGG | + | chr1_2:72379240-72379259 | Msa0090390:CDS | 45.0% | |
GGTCAAATTGGAACCTCACT+TGG | + | chr1_2:72379291-72379310 | Msa0090390:CDS | 45.0% | |
AATGTGAACATGAGTGGTCG+TGG | - | chr1_2:72379429-72379448 | None:intergenic | 45.0% | |
!! | GAGGCCATTTTGCACATCAA+AGG | - | chr1_2:72379490-72379509 | None:intergenic | 45.0% |
!! | TTTTGGTGCACAATGGCCAT+TGG | + | chr1_2:72379539-72379558 | Msa0090390:CDS | 45.0% |
CAACTTCAACCTGCTCTGAT+CGG | - | chr1_2:72379884-72379903 | None:intergenic | 45.0% | |
! | TCAGAGCAGGTTGAAGTTGA+AGG | + | chr1_2:72379885-72379904 | Msa0090390:CDS | 45.0% |
GGTTGAAGTTGAAGGAGCTA+CGG | + | chr1_2:72379893-72379912 | Msa0090390:CDS | 45.0% | |
ATGACGGTGGTCCAAAATGA+CGG | + | chr1_2:72379921-72379940 | Msa0090390:CDS | 45.0% | |
GACAGGAAGCAAAAGCTACA+GGG | + | chr1_2:72379952-72379971 | Msa0090390:CDS | 45.0% | |
TCCAAGTTATCACAGGACGA+TGG | + | chr1_2:72378242-72378261 | Msa0090390:CDS | 45.0% | |
ACCATCGTCCTGTGATAACT+TGG | - | chr1_2:72378246-72378265 | None:intergenic | 45.0% | |
AAAGACTTAGGTGGCAACCT+TGG | + | chr1_2:72378394-72378413 | Msa0090390:CDS | 45.0% | |
AAGAATTTCCCCGAAACTCG+TGG | + | chr1_2:72378625-72378644 | Msa0090390:CDS | 45.0% | |
AACACAACACCACGAGTTTC+GGG | - | chr1_2:72378637-72378656 | None:intergenic | 45.0% | |
CAACACAACACCACGAGTTT+CGG | - | chr1_2:72378638-72378657 | None:intergenic | 45.0% | |
!! | GAAACTCGTGGTGTTGTGTT+GGG | + | chr1_2:72378637-72378656 | Msa0090390:CDS | 45.0% |
!! | AAACTCGTGGTGTTGTGTTG+GGG | + | chr1_2:72378638-72378657 | Msa0090390:CDS | 45.0% |
CAAAGACAACAGCAAGAGGT+AGG | - | chr1_2:72378978-72378997 | None:intergenic | 45.0% | |
TTTGCTGGTACATGTGGTGT+TGG | + | chr1_2:72379240-72379259 | Msa0090390:CDS | 45.0% | |
GGTCAAATTGGAACCTCACT+TGG | + | chr1_2:72379291-72379310 | Msa0090390:CDS | 45.0% | |
AATGTGAACATGAGTGGTCG+TGG | - | chr1_2:72379429-72379448 | None:intergenic | 45.0% | |
!! | GAGGCCATTTTGCACATCAA+AGG | - | chr1_2:72379490-72379509 | None:intergenic | 45.0% |
!! | TTTTGGTGCACAATGGCCAT+TGG | + | chr1_2:72379539-72379558 | Msa0090390:CDS | 45.0% |
CAACTTCAACCTGCTCTGAT+CGG | - | chr1_2:72379884-72379903 | None:intergenic | 45.0% | |
! | TCAGAGCAGGTTGAAGTTGA+AGG | + | chr1_2:72379885-72379904 | Msa0090390:CDS | 45.0% |
GGTTGAAGTTGAAGGAGCTA+CGG | + | chr1_2:72379893-72379912 | Msa0090390:CDS | 45.0% | |
ATGACGGTGGTCCAAAATGA+CGG | + | chr1_2:72379921-72379940 | Msa0090390:CDS | 45.0% | |
GACAGGAAGCAAAAGCTACA+GGG | + | chr1_2:72379952-72379971 | Msa0090390:CDS | 45.0% | |
! | TTGAAGGTGTAAGCCCGTTG+AGG | + | chr1_2:72378194-72378213 | Msa0090390:CDS | 50.0% |
TATCACAGGACGATGGTTCG+TGG | + | chr1_2:72378249-72378268 | Msa0090390:CDS | 50.0% | |
TCAGGAGCCACCTACATGTT+TGG | + | chr1_2:72378301-72378320 | Msa0090390:CDS | 50.0% | |
!!! | GGCAACCTTGGTGTTTTCTC+TGG | + | chr1_2:72378406-72378425 | Msa0090390:CDS | 50.0% |
ACACAACACCACGAGTTTCG+GGG | - | chr1_2:72378636-72378655 | None:intergenic | 50.0% | |
!! | CGAAACTCGTGGTGTTGTGT+TGG | + | chr1_2:72378636-72378655 | Msa0090390:CDS | 50.0% |
GTCCAAAATGACGGCAAGAG+AGG | + | chr1_2:72379930-72379949 | Msa0090390:CDS | 50.0% | |
! | GTCCTCTCTTGCCGTCATTT+TGG | - | chr1_2:72379935-72379954 | None:intergenic | 50.0% |
AAATGACGGCAAGAGAGGAC+AGG | + | chr1_2:72379935-72379954 | Msa0090390:CDS | 50.0% | |
GGACAGGAAGCAAAAGCTAC+AGG | + | chr1_2:72379951-72379970 | Msa0090390:CDS | 50.0% | |
! | TTGAAGGTGTAAGCCCGTTG+AGG | + | chr1_2:72378194-72378213 | Msa0090390:CDS | 50.0% |
TATCACAGGACGATGGTTCG+TGG | + | chr1_2:72378249-72378268 | Msa0090390:CDS | 50.0% | |
TCAGGAGCCACCTACATGTT+TGG | + | chr1_2:72378301-72378320 | Msa0090390:CDS | 50.0% | |
!!! | GGCAACCTTGGTGTTTTCTC+TGG | + | chr1_2:72378406-72378425 | Msa0090390:CDS | 50.0% |
ACACAACACCACGAGTTTCG+GGG | - | chr1_2:72378636-72378655 | None:intergenic | 50.0% | |
!! | CGAAACTCGTGGTGTTGTGT+TGG | + | chr1_2:72378636-72378655 | Msa0090390:CDS | 50.0% |
GTCCAAAATGACGGCAAGAG+AGG | + | chr1_2:72379930-72379949 | Msa0090390:CDS | 50.0% | |
! | GTCCTCTCTTGCCGTCATTT+TGG | - | chr1_2:72379935-72379954 | None:intergenic | 50.0% |
AAATGACGGCAAGAGAGGAC+AGG | + | chr1_2:72379935-72379954 | Msa0090390:CDS | 50.0% | |
GGACAGGAAGCAAAAGCTAC+AGG | + | chr1_2:72379951-72379970 | Msa0090390:CDS | 50.0% | |
! | GCTGGTACATGTGGTGTTGG+TGG | + | chr1_2:72379243-72379262 | Msa0090390:CDS | 55.0% |
GGTGGGGTAGCTAGTCCAAT+TGG | + | chr1_2:72379621-72379640 | Msa0090390:CDS | 55.0% | |
!! | CAAGAGGTACCGATCAGAGC+AGG | + | chr1_2:72379872-72379891 | Msa0090390:CDS | 55.0% |
AGGAGCTACGGCTGAGATGA+CGG | + | chr1_2:72379905-72379924 | Msa0090390:CDS | 55.0% | |
! | GCTGGTACATGTGGTGTTGG+TGG | + | chr1_2:72379243-72379262 | Msa0090390:CDS | 55.0% |
GGTGGGGTAGCTAGTCCAAT+TGG | + | chr1_2:72379621-72379640 | Msa0090390:CDS | 55.0% | |
!! | CAAGAGGTACCGATCAGAGC+AGG | + | chr1_2:72379872-72379891 | Msa0090390:CDS | 55.0% |
AGGAGCTACGGCTGAGATGA+CGG | + | chr1_2:72379905-72379924 | Msa0090390:CDS | 55.0% | |
! | AGCTACGGCTGAGATGACGG+TGG | + | chr1_2:72379908-72379927 | Msa0090390:CDS | 60.0% |
! | AGCTACGGCTGAGATGACGG+TGG | + | chr1_2:72379908-72379927 | Msa0090390:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 72378187 | 72379980 | 72378187 | ID=Msa0090390;Name=Msa0090390 |
chr1_2 | mRNA | 72378187 | 72379980 | 72378187 | ID=Msa0090390-mRNA-1;Parent=Msa0090390;Name=Msa0090390-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|597 |
chr1_2 | exon | 72378187 | 72379980 | 72378187 | ID=Msa0090390-mRNA-1:exon:25078;Parent=Msa0090390-mRNA-1 |
chr1_2 | CDS | 72378187 | 72379980 | 72378187 | ID=Msa0090390-mRNA-1:cds;Parent=Msa0090390-mRNA-1 |
Gene Sequence |
Protein sequence |