Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0596800 | XP_024638163.1 | 89.785 | 372 | 10 | 1 | 1 | 344 | 1 | 372 | 0.0 | 681 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0596800 | sp|Q9LDC0|FKB42_ARATH | 62.466 | 373 | 102 | 5 | 1 | 343 | 1 | 365 | 1.79e-161 | 458 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003890 | Msa0596800 | 0.812393 | 4.337464e-51 | -8.615850e-47 |
Msa0004860 | Msa0596800 | 0.805548 | 1.265974e-49 | -8.615850e-47 |
Msa0004920 | Msa0596800 | 0.803414 | 3.525920e-49 | -8.615850e-47 |
Msa0006070 | Msa0596800 | 0.818507 | 1.890601e-52 | -8.615850e-47 |
Msa0007440 | Msa0596800 | 0.801612 | 8.295617e-49 | -8.615850e-47 |
Msa0011170 | Msa0596800 | 0.815289 | 9.975680e-52 | -8.615850e-47 |
Msa0016060 | Msa0596800 | 0.808171 | 3.530324e-50 | -8.615850e-47 |
Msa0020930 | Msa0596800 | 0.829652 | 4.566033e-55 | -8.615850e-47 |
Msa0021510 | Msa0596800 | 0.803738 | 3.020408e-49 | -8.615850e-47 |
Msa0028660 | Msa0596800 | 0.829901 | 3.970755e-55 | -8.615850e-47 |
Msa0032090 | Msa0596800 | 0.815009 | 1.151371e-51 | -8.615850e-47 |
Msa0032580 | Msa0596800 | 0.809609 | 1.738936e-50 | -8.615850e-47 |
Msa0037540 | Msa0596800 | -0.813366 | 2.654393e-51 | -8.615850e-47 |
Msa0037570 | Msa0596800 | -0.816691 | 4.853226e-52 | -8.615850e-47 |
Msa0037590 | Msa0596800 | -0.807287 | 5.442048e-50 | -8.615850e-47 |
Msa0044260 | Msa0596800 | 0.808808 | 2.581616e-50 | -8.615850e-47 |
Msa0044330 | Msa0596800 | 0.829665 | 4.533931e-55 | -8.615850e-47 |
Msa0044540 | Msa0596800 | -0.806343 | 8.612458e-50 | -8.615850e-47 |
Msa0045790 | Msa0596800 | 0.804089 | 2.553690e-49 | -8.615850e-47 |
Msa0046160 | Msa0596800 | 0.807607 | 4.654829e-50 | -8.615850e-47 |
Msa0054260 | Msa0596800 | 0.806413 | 8.327692e-50 | -8.615850e-47 |
Msa0054310 | Msa0596800 | 0.816506 | 5.340356e-52 | -8.615850e-47 |
Msa0054780 | Msa0596800 | 0.838608 | 2.599120e-57 | -8.615850e-47 |
Msa0068680 | Msa0596800 | 0.801598 | 8.350063e-49 | -8.615850e-47 |
Msa0076320 | Msa0596800 | 0.830209 | 3.341435e-55 | -8.615850e-47 |
Msa0079070 | Msa0596800 | 0.822850 | 1.899904e-53 | -8.615850e-47 |
Msa0079080 | Msa0596800 | 0.804822 | 1.796245e-49 | -8.615850e-47 |
Msa0081930 | Msa0596800 | 0.814105 | 1.825243e-51 | -8.615850e-47 |
Msa0091570 | Msa0596800 | 0.825049 | 5.793853e-54 | -8.615850e-47 |
Msa0096030 | Msa0596800 | 0.818049 | 2.400942e-52 | -8.615850e-47 |
Msa0100090 | Msa0596800 | 0.830978 | 2.166147e-55 | -8.615850e-47 |
Msa0101700 | Msa0596800 | 0.801839 | 7.450631e-49 | -8.615850e-47 |
Msa0114060 | Msa0596800 | 0.821389 | 4.144401e-53 | -8.615850e-47 |
Msa0115270 | Msa0596800 | 0.839142 | 1.891287e-57 | -8.615850e-47 |
Msa0115390 | Msa0596800 | 0.811791 | 5.868245e-51 | -8.615850e-47 |
Msa0129190 | Msa0596800 | -0.819456 | 1.150722e-52 | -8.615850e-47 |
Msa0135380 | Msa0596800 | 0.816374 | 5.715950e-52 | -8.615850e-47 |
Msa0136070 | Msa0596800 | 0.837030 | 6.611969e-57 | -8.615850e-47 |
Msa0136100 | Msa0596800 | 0.829958 | 3.847141e-55 | -8.615850e-47 |
Msa0140500 | Msa0596800 | -0.804842 | 1.778917e-49 | -8.615850e-47 |
Msa0145440 | Msa0596800 | 0.800124 | 1.669725e-48 | -8.615850e-47 |
Msa0159930 | Msa0596800 | 0.818144 | 2.284657e-52 | -8.615850e-47 |
Msa0160550 | Msa0596800 | 0.800638 | 1.312136e-48 | -8.615850e-47 |
Msa0165210 | Msa0596800 | 0.808482 | 3.030924e-50 | -8.615850e-47 |
Msa0165220 | Msa0596800 | 0.817691 | 2.891693e-52 | -8.615850e-47 |
Msa0172970 | Msa0596800 | 0.803934 | 2.750531e-49 | -8.615850e-47 |
Msa0173990 | Msa0596800 | 0.811005 | 8.691516e-51 | -8.615850e-47 |
Msa0178800 | Msa0596800 | 0.815974 | 7.020048e-52 | -8.615850e-47 |
Msa0189320 | Msa0596800 | 0.811220 | 7.806777e-51 | -8.615850e-47 |
Msa0192510 | Msa0596800 | 0.804014 | 2.646842e-49 | -8.615850e-47 |
Msa0197660 | Msa0596800 | 0.851759 | 7.200155e-61 | -8.615850e-47 |
Msa0202750 | Msa0596800 | 0.816063 | 6.705971e-52 | -8.615850e-47 |
Msa0211150 | Msa0596800 | 0.840714 | 7.361634e-58 | -8.615850e-47 |
Msa0212310 | Msa0596800 | 0.811171 | 7.999609e-51 | -8.615850e-47 |
Msa0212990 | Msa0596800 | 0.810165 | 1.320332e-50 | -8.615850e-47 |
Msa0224320 | Msa0596800 | 0.821845 | 3.251079e-53 | -8.615850e-47 |
Msa0234430 | Msa0596800 | 0.815381 | 9.517235e-52 | -8.615850e-47 |
Msa0367870 | Msa0596800 | 0.805551 | 1.263843e-49 | -8.615850e-47 |
Msa0372340 | Msa0596800 | 0.816048 | 6.759457e-52 | -8.615850e-47 |
Msa0383800 | Msa0596800 | 0.838358 | 3.016250e-57 | -8.615850e-47 |
Msa0386920 | Msa0596800 | 0.809427 | 1.902920e-50 | -8.615850e-47 |
Msa0388280 | Msa0596800 | 0.804628 | 1.971792e-49 | -8.615850e-47 |
Msa0393080 | Msa0596800 | 0.812559 | 3.989364e-51 | -8.615850e-47 |
Msa0399340 | Msa0596800 | 0.805780 | 1.131525e-49 | -8.615850e-47 |
Msa0428080 | Msa0596800 | 0.839058 | 1.988514e-57 | -8.615850e-47 |
Msa0432770 | Msa0596800 | 0.820454 | 6.800898e-53 | -8.615850e-47 |
Msa0434180 | Msa0596800 | 0.824946 | 6.125497e-54 | -8.615850e-47 |
Msa0440400 | Msa0596800 | 0.801289 | 9.658502e-49 | -8.615850e-47 |
Msa0440750 | Msa0596800 | 0.826567 | 2.527816e-54 | -8.615850e-47 |
Msa0477080 | Msa0596800 | 0.809982 | 1.445526e-50 | -8.615850e-47 |
Msa0479170 | Msa0596800 | 0.820875 | 5.443357e-53 | -8.615850e-47 |
Msa0480000 | Msa0596800 | 0.809584 | 1.760637e-50 | -8.615850e-47 |
Msa0239800 | Msa0596800 | 0.850090 | 2.126439e-60 | -8.615850e-47 |
Msa0260680 | Msa0596800 | 0.849917 | 2.376352e-60 | -8.615850e-47 |
Msa0265380 | Msa0596800 | 0.824383 | 8.317483e-54 | -8.615850e-47 |
Msa0272720 | Msa0596800 | 0.819529 | 1.107411e-52 | -8.615850e-47 |
Msa0277820 | Msa0596800 | 0.820743 | 5.836774e-53 | -8.615850e-47 |
Msa0279220 | Msa0596800 | 0.803709 | 3.063359e-49 | -8.615850e-47 |
Msa0279240 | Msa0596800 | 0.801417 | 9.095141e-49 | -8.615850e-47 |
Msa0280090 | Msa0596800 | 0.843195 | 1.626656e-58 | -8.615850e-47 |
Msa0292120 | Msa0596800 | 0.804803 | 1.812642e-49 | -8.615850e-47 |
Msa0303360 | Msa0596800 | 0.818313 | 2.091908e-52 | -8.615850e-47 |
Msa0308580 | Msa0596800 | 0.806400 | 8.378962e-50 | -8.615850e-47 |
Msa0309770 | Msa0596800 | 0.851171 | 1.055689e-60 | -8.615850e-47 |
Msa0316910 | Msa0596800 | 0.800321 | 1.522818e-48 | -8.615850e-47 |
Msa0317510 | Msa0596800 | 0.845149 | 4.863415e-59 | -8.615850e-47 |
Msa0318980 | Msa0596800 | 0.815813 | 7.625161e-52 | -8.615850e-47 |
Msa0320100 | Msa0596800 | 0.801463 | 8.898439e-49 | -8.615850e-47 |
Msa0321080 | Msa0596800 | 0.805773 | 1.135462e-49 | -8.615850e-47 |
Msa0333600 | Msa0596800 | 0.801878 | 7.314725e-49 | -8.615850e-47 |
Msa0340450 | Msa0596800 | 0.813294 | 2.753220e-51 | -8.615850e-47 |
Msa0345970 | Msa0596800 | 0.819650 | 1.039238e-52 | -8.615850e-47 |
Msa0363790 | Msa0596800 | 0.820844 | 5.534899e-53 | -8.615850e-47 |
Msa0484780 | Msa0596800 | 0.817549 | 3.113325e-52 | -8.615850e-47 |
Msa0488560 | Msa0596800 | 0.804000 | 2.664595e-49 | -8.615850e-47 |
Msa0502880 | Msa0596800 | 0.802245 | 6.147655e-49 | -8.615850e-47 |
Msa0507680 | Msa0596800 | 0.808162 | 3.546364e-50 | -8.615850e-47 |
Msa0509710 | Msa0596800 | 0.805082 | 1.585157e-49 | -8.615850e-47 |
Msa0510350 | Msa0596800 | 0.831536 | 1.578771e-55 | -8.615850e-47 |
Msa0512750 | Msa0596800 | 0.822299 | 2.551870e-53 | -8.615850e-47 |
Msa0515010 | Msa0596800 | 0.808151 | 3.566135e-50 | -8.615850e-47 |
Msa0532540 | Msa0596800 | 0.815440 | 9.233007e-52 | -8.615850e-47 |
Msa0541360 | Msa0596800 | 0.803183 | 3.936043e-49 | -8.615850e-47 |
Msa0545120 | Msa0596800 | 0.808836 | 2.546656e-50 | -8.615850e-47 |
Msa0547760 | Msa0596800 | 0.801367 | 9.309401e-49 | -8.615850e-47 |
Msa0558690 | Msa0596800 | 0.823922 | 1.067251e-53 | -8.615850e-47 |
Msa0559190 | Msa0596800 | 0.806948 | 6.419356e-50 | -8.615850e-47 |
Msa0560870 | Msa0596800 | 0.823131 | 1.634003e-53 | -8.615850e-47 |
Msa0562440 | Msa0596800 | 0.806372 | 8.493187e-50 | -8.615850e-47 |
Msa0565960 | Msa0596800 | 0.812549 | 4.009685e-51 | -8.615850e-47 |
Msa0578040 | Msa0596800 | 0.849109 | 3.993924e-60 | -8.615850e-47 |
Msa0584860 | Msa0596800 | 0.847376 | 1.202281e-59 | -8.615850e-47 |
Msa0589390 | Msa0596800 | 0.815292 | 9.963072e-52 | -8.615850e-47 |
Msa0593650 | Msa0596800 | 0.821202 | 4.575755e-53 | -8.615850e-47 |
Msa0596800 | Msa0602310 | 0.802540 | 5.345438e-49 | -8.615850e-47 |
Msa0596800 | Msa0602390 | 0.828124 | 1.069976e-54 | -8.615850e-47 |
Msa0596800 | Msa0604510 | 0.805530 | 1.276980e-49 | -8.615850e-47 |
Msa0596800 | Msa0610430 | 0.822733 | 2.022857e-53 | -8.615850e-47 |
Msa0596800 | Msa0616160 | 0.849314 | 3.502364e-60 | -8.615850e-47 |
Msa0596800 | Msa0620620 | 0.803686 | 3.096763e-49 | -8.615850e-47 |
Msa0596800 | Msa0621490 | 0.836745 | 7.813663e-57 | -8.615850e-47 |
Msa0596800 | Msa0623080 | 0.815830 | 7.562321e-52 | -8.615850e-47 |
Msa0596800 | Msa0629650 | 0.828483 | 8.766145e-55 | -8.615850e-47 |
Msa0596800 | Msa0636070 | 0.800071 | 1.711890e-48 | -8.615850e-47 |
Msa0596800 | Msa0636660 | 0.841579 | 4.361640e-58 | -8.615850e-47 |
Msa0596800 | Msa0641670 | 0.843369 | 1.461538e-58 | -8.615850e-47 |
Msa0596800 | Msa0643560 | 0.813921 | 2.003286e-51 | -8.615850e-47 |
Msa0596800 | Msa0649350 | 0.805370 | 1.379305e-49 | -8.615850e-47 |
Msa0596800 | Msa0654010 | 0.803709 | 3.063502e-49 | -8.615850e-47 |
Msa0596800 | Msa0661190 | -0.846410 | 2.209821e-59 | -8.615850e-47 |
Msa0596800 | Msa0661650 | 0.811552 | 6.612735e-51 | -8.615850e-47 |
Msa0596800 | Msa0663240 | 0.803662 | 3.132376e-49 | -8.615850e-47 |
Msa0596800 | Msa0673460 | 0.821548 | 3.808072e-53 | -8.615850e-47 |
Msa0596800 | Msa0688390 | 0.849263 | 3.617324e-60 | -8.615850e-47 |
Msa0596800 | Msa0688480 | 0.811228 | 7.777367e-51 | -8.615850e-47 |
Msa0596800 | Msa0688960 | 0.815671 | 8.203801e-52 | -8.615850e-47 |
Msa0596800 | Msa0689010 | 0.825409 | 4.762070e-54 | -8.615850e-47 |
Msa0596800 | Msa0689800 | 0.806454 | 8.161325e-50 | -8.615850e-47 |
Msa0596800 | Msa0692830 | 0.806017 | 1.008737e-49 | -8.615850e-47 |
Msa0596800 | Msa0692950 | 0.808930 | 2.431689e-50 | -8.615850e-47 |
Msa0596800 | Msa0693380 | 0.830814 | 2.375512e-55 | -8.615850e-47 |
Msa0596800 | Msa0696450 | 0.864075 | 1.577970e-64 | -8.615850e-47 |
Msa0596800 | Msa0698400 | 0.825669 | 4.132511e-54 | -8.615850e-47 |
Msa0596800 | Msa0709400 | 0.801094 | 1.058885e-48 | -8.615850e-47 |
Msa0596800 | Msa0715410 | 0.804093 | 2.549180e-49 | -8.615850e-47 |
Msa0596800 | Msa0716840 | 0.813175 | 2.922967e-51 | -8.615850e-47 |
Msa0596800 | Msa0717310 | 0.803574 | 3.267108e-49 | -8.615850e-47 |
Msa0596800 | Msa0740510 | 0.813986 | 1.938280e-51 | -8.615850e-47 |
Msa0596800 | Msa0743720 | 0.807875 | 4.082360e-50 | -8.615850e-47 |
Msa0596800 | Msa0767300 | 0.803312 | 3.702159e-49 | -8.615850e-47 |
Msa0596800 | Msa0769920 | 0.814726 | 1.330570e-51 | -8.615850e-47 |
Msa0596800 | Msa0796700 | 0.800776 | 1.229875e-48 | -8.615850e-47 |
Msa0596800 | Msa0808270 | 0.815208 | 1.040183e-51 | -8.615850e-47 |
Msa0596800 | Msa0820770 | 0.822160 | 2.747749e-53 | -8.615850e-47 |
Msa0596800 | Msa0826760 | 0.810097 | 1.365651e-50 | -8.615850e-47 |
Msa0596800 | Msa0831110 | 0.833040 | 6.700174e-56 | -8.615850e-47 |
Msa0596800 | Msa0831850 | 0.808885 | 2.485766e-50 | -8.615850e-47 |
Msa0596800 | Msa0832340 | 0.803225 | 3.857902e-49 | -8.615850e-47 |
Msa0596800 | Msa0833460 | 0.810639 | 1.042779e-50 | -8.615850e-47 |
Msa0596800 | Msa0835800 | 0.806264 | 8.950475e-50 | -8.615850e-47 |
Msa0596800 | Msa0850960 | 0.816812 | 4.560205e-52 | -8.615850e-47 |
Msa0596800 | Msa0857640 | 0.800094 | 1.693463e-48 | -8.615850e-47 |
Msa0596800 | Msa0861090 | 0.815067 | 1.117690e-51 | -8.615850e-47 |
Msa0596800 | Msa0861470 | 0.800692 | 1.279103e-48 | -8.615850e-47 |
Msa0596800 | Msa0862110 | 0.800027 | 1.747079e-48 | -8.615850e-47 |
Msa0596800 | Msa0865330 | 0.811084 | 8.354844e-51 | -8.615850e-47 |
Msa0596800 | Msa0869860 | 0.808104 | 3.647860e-50 | -8.615850e-47 |
Msa0596800 | Msa0871270 | 0.809551 | 1.789530e-50 | -8.615850e-47 |
Msa0596800 | Msa0878500 | 0.804078 | 2.567402e-49 | -8.615850e-47 |
Msa0596800 | Msa0895120 | 0.831940 | 1.255376e-55 | -8.615850e-47 |
Msa0596800 | Msa0897330 | 0.817905 | 2.587781e-52 | -8.615850e-47 |
Msa0596800 | Msa0938220 | 0.817969 | 2.502423e-52 | -8.615850e-47 |
Msa0596800 | Msa0939250 | 0.813214 | 2.866324e-51 | -8.615850e-47 |
Msa0596800 | Msa0944190 | 0.816931 | 4.287657e-52 | -8.615850e-47 |
Msa0596800 | Msa0945970 | 0.829382 | 5.312271e-55 | -8.615850e-47 |
Msa0596800 | Msa0947660 | 0.813869 | 2.056956e-51 | -8.615850e-47 |
Msa0596800 | Msa0969520 | 0.805853 | 1.092244e-49 | -8.615850e-47 |
Msa0596800 | Msa0969810 | 0.824123 | 9.572976e-54 | -8.615850e-47 |
Msa0596800 | Msa0971020 | 0.804325 | 2.279982e-49 | -8.615850e-47 |
Msa0596800 | Msa0973600 | 0.816304 | 5.926136e-52 | -8.615850e-47 |
Msa0596800 | Msa0993290 | 0.801705 | 7.938013e-49 | -8.615850e-47 |
Msa0596800 | Msa0994950 | 0.812511 | 4.087493e-51 | -8.615850e-47 |
Msa0596800 | Msa0996170 | 0.810691 | 1.016496e-50 | -8.615850e-47 |
Msa0596800 | Msa1002850 | 0.805778 | 1.132619e-49 | -8.615850e-47 |
Msa0596800 | Msa1003620 | 0.804659 | 1.942526e-49 | -8.615850e-47 |
Msa0596800 | Msa1012830 | 0.802686 | 4.987705e-49 | -8.615850e-47 |
Msa0596800 | Msa1014540 | 0.826525 | 2.586745e-54 | -8.615850e-47 |
Msa0596800 | Msa1017630 | 0.805644 | 1.208445e-49 | -8.615850e-47 |
Msa0596800 | Msa1018100 | 0.806821 | 6.829428e-50 | -8.615850e-47 |
Msa0596800 | Msa1018980 | 0.817612 | 3.013682e-52 | -8.615850e-47 |
Msa0596800 | Msa1025080 | 0.806988 | 6.294482e-50 | -8.615850e-47 |
Msa0596800 | Msa1034150 | 0.800588 | 1.343461e-48 | -8.615850e-47 |
Msa0596800 | Msa1037420 | 0.841389 | 4.894931e-58 | -8.615850e-47 |
Msa0596800 | Msa1046020 | 0.803496 | 3.391213e-49 | -8.615850e-47 |
Msa0596800 | Msa1046060 | 0.806935 | 6.458826e-50 | -8.615850e-47 |
Msa0596800 | Msa1082300 | 0.803241 | 3.828758e-49 | -8.615850e-47 |
Msa0596800 | Msa1082500 | 0.849165 | 3.851633e-60 | -8.615850e-47 |
Msa0596800 | Msa1103980 | 0.809172 | 2.157376e-50 | -8.615850e-47 |
Msa0596800 | Msa1104090 | 0.807283 | 5.451079e-50 | -8.615850e-47 |
Msa0596800 | Msa1109090 | 0.804653 | 1.948069e-49 | -8.615850e-47 |
Msa0596800 | Msa1113170 | 0.807643 | 4.573506e-50 | -8.615850e-47 |
Msa0596800 | Msa1123810 | 0.820044 | 8.445074e-53 | -8.615850e-47 |
Msa0596800 | Msa1124960 | 0.807293 | 5.425350e-50 | -8.615850e-47 |
Msa0596800 | Msa1127190 | 0.809408 | 1.920767e-50 | -8.615850e-47 |
Msa0596800 | Msa1128060 | 0.831398 | 1.707759e-55 | -8.615850e-47 |
Msa0596800 | Msa1147710 | 0.820397 | 7.010453e-53 | -8.615850e-47 |
Msa0596800 | Msa1150710 | 0.800196 | 1.614345e-48 | -8.615850e-47 |
Msa0596800 | Msa1154280 | 0.806910 | 6.539973e-50 | -8.615850e-47 |
Msa0596800 | Msa1167340 | 0.803620 | 3.195194e-49 | -8.615850e-47 |
Msa0596800 | Msa1174040 | 0.821888 | 3.178154e-53 | -8.615850e-47 |
Msa0596800 | Msa1203250 | 0.836979 | 6.810834e-57 | -8.615850e-47 |
Msa0596800 | Msa1204530 | 0.814894 | 1.221107e-51 | -8.615850e-47 |
Msa0596800 | Msa1204630 | 0.804848 | 1.773536e-49 | -8.615850e-47 |
Msa0596800 | Msa1206670 | 0.802130 | 6.490462e-49 | -8.615850e-47 |
Msa0596800 | Msa1210110 | 0.811267 | 7.625530e-51 | -8.615850e-47 |
Msa0596800 | Msa1211150 | -0.801536 | 8.596915e-49 | -8.615850e-47 |
Msa0596800 | Msa1228520 | 0.800572 | 1.353267e-48 | -8.615850e-47 |
Msa0596800 | Msa1228590 | 0.806626 | 7.507958e-50 | -8.615850e-47 |
Msa0596800 | Msa1231840 | 0.817422 | 3.325810e-52 | -8.615850e-47 |
Msa0596800 | Msa1244250 | 0.813562 | 2.403431e-51 | -8.615850e-47 |
Msa0596800 | Msa1246510 | 0.808372 | 3.199405e-50 | -8.615850e-47 |
Msa0596800 | Msa1249490 | 0.807444 | 5.040173e-50 | -8.615850e-47 |
Msa0596800 | Msa1257130 | 0.804069 | 2.578456e-49 | -8.615850e-47 |
Msa0596800 | Msa1275360 | 0.822861 | 1.888315e-53 | -8.615850e-47 |
Msa0596800 | Msa1287460 | 0.804314 | 2.292554e-49 | -8.615850e-47 |
Msa0596800 | Msa1296760 | 0.806575 | 7.695782e-50 | -8.615850e-47 |
Msa0596800 | Msa1305810 | 0.815699 | 8.088250e-52 | -8.615850e-47 |
Msa0596800 | Msa1306560 | 0.845310 | 4.399204e-59 | -8.615850e-47 |
Msa0596800 | Msa1308870 | 0.800847 | 1.189292e-48 | -8.615850e-47 |
Msa0596800 | Msa1314170 | 0.808610 | 2.846491e-50 | -8.615850e-47 |
Msa0596800 | Msa1320410 | 0.800056 | 1.723800e-48 | -8.615850e-47 |
Msa0596800 | Msa1331000 | 0.817940 | 2.540148e-52 | -8.615850e-47 |
Msa0596800 | Msa1331320 | 0.804041 | 2.612898e-49 | -8.615850e-47 |
Msa0596800 | Msa1333410 | 0.816602 | 5.082193e-52 | -8.615850e-47 |
Msa0596800 | Msa1340260 | 0.811738 | 6.026245e-51 | -8.615850e-47 |
Msa0596800 | Msa1340470 | 0.822497 | 2.294978e-53 | -8.615850e-47 |
Msa0596800 | Msa1348890 | 0.823594 | 1.273800e-53 | -8.615850e-47 |
Msa0596800 | Msa1351890 | 0.809472 | 1.860753e-50 | -8.615850e-47 |
Msa0596800 | Msa1353980 | 0.820803 | 5.654295e-53 | -8.615850e-47 |
Msa0596800 | Msa1355890 | 0.809182 | 2.147191e-50 | -8.615850e-47 |
Msa0596800 | Msa1371430 | 0.804678 | 1.924582e-49 | -8.615850e-47 |
Msa0596800 | Msa1375380 | 0.858563 | 7.560528e-63 | -8.615850e-47 |
Msa0596800 | Msa1379500 | 0.806107 | 9.656345e-50 | -8.615850e-47 |
Msa0596800 | Msa1384350 | 0.801109 | 1.051423e-48 | -8.615850e-47 |
Msa0596800 | Msa1385770 | 0.826024 | 3.404203e-54 | -8.615850e-47 |
Msa0596800 | Msa1394380 | 0.846912 | 1.611653e-59 | -8.615850e-47 |
Msa0596800 | Msa1403680 | 0.807157 | 5.798224e-50 | -8.615850e-47 |
Msa0596800 | Msa1409240 | 0.826417 | 2.744802e-54 | -8.615850e-47 |
Msa0596800 | Msa1411020 | 0.801657 | 8.119870e-49 | -8.615850e-47 |
Msa0596800 | Msa1412640 | 0.825631 | 4.218728e-54 | -8.615850e-47 |
Msa0596800 | Msa1415640 | 0.816782 | 4.631770e-52 | -8.615850e-47 |
Msa0596800 | Msa1420290 | 0.820111 | 8.153106e-53 | -8.615850e-47 |
Msa0596800 | Msa1424450 | 0.802512 | 5.416708e-49 | -8.615850e-47 |
Msa0596800 | Msa1424750 | 0.856129 | 3.964495e-62 | -8.615850e-47 |
Msa0596800 | Msa1426030 | 0.809857 | 1.537669e-50 | -8.615850e-47 |
Msa0596800 | Msa1432420 | 0.807585 | 4.703222e-50 | -8.615850e-47 |
Msa0596800 | Msa1434140 | 0.831852 | 1.319397e-55 | -8.615850e-47 |
Msa0596800 | Msa1434350 | 0.801386 | 9.226832e-49 | -8.615850e-47 |
Msa0596800 | Msa1436480 | 0.802110 | 6.552700e-49 | -8.615850e-47 |
Msa0596800 | Msa1439320 | 0.801294 | 9.635594e-49 | -8.615850e-47 |
Msa0596800 | Msa1445390 | -0.803850 | 2.863599e-49 | -8.615850e-47 |
Msa0596800 | Msa1449340 | -0.817699 | 2.880366e-52 | -8.615850e-47 |
Msa0596800 | Msa1450760 | 0.823811 | 1.132837e-53 | -8.615850e-47 |
Msa0596800 | Msa1460050 | 0.816929 | 4.291671e-52 | -8.615850e-47 |
Msa0596800 | Msa1464810 | 0.817107 | 3.915025e-52 | -8.615850e-47 |
Msa0596800 | Msa1466540 | 0.811325 | 7.406838e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0596800 | MtrunA17_Chr4g0019501 | 89.785 | 372 | 10 | 1 | 1 | 344 | 1 | 372 | 0.0 | 681 |
Msa0596800 | MtrunA17_Chr7g0234801 | 29.391 | 279 | 167 | 4 | 55 | 306 | 267 | 542 | 1.80e-23 | 101 |
Msa0596800 | MtrunA17_Chr8g0377771 | 28.777 | 278 | 166 | 5 | 55 | 304 | 271 | 544 | 1.71e-21 | 95.5 |
Msa0596800 | MtrunA17_Chr8g0339141 | 30.804 | 224 | 125 | 4 | 107 | 303 | 327 | 547 | 2.16e-19 | 89.4 |
Msa0596800 | MtrunA17_Chr1g0152361 | 26.797 | 306 | 181 | 10 | 37 | 310 | 85 | 379 | 1.18e-16 | 80.1 |
Msa0596800 | MtrunA17_Chr4g0027201 | 26.727 | 333 | 187 | 14 | 22 | 307 | 230 | 552 | 7.63e-12 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0596800 | AT3G21640.1 | 62.466 | 373 | 102 | 5 | 1 | 343 | 1 | 365 | 1.82e-162 | 458 |
Msa0596800 | AT5G48570.1 | 30.137 | 292 | 169 | 8 | 49 | 309 | 274 | 561 | 2.06e-21 | 95.5 |
Msa0596800 | AT3G25230.1 | 26.897 | 290 | 157 | 7 | 55 | 304 | 272 | 546 | 8.47e-18 | 84.7 |
Msa0596800 | AT3G25230.2 | 26.897 | 290 | 157 | 7 | 55 | 304 | 272 | 546 | 1.18e-17 | 84.3 |
Msa0596800 | AT3G54010.2 | 27.564 | 312 | 166 | 13 | 45 | 307 | 160 | 460 | 2.00e-11 | 65.5 |
Msa0596800 | AT3G54010.1 | 27.564 | 312 | 166 | 13 | 45 | 307 | 250 | 550 | 2.28e-11 | 65.5 |
Find 103 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATGGAAATGTTCTGTTTC+AGG | 0.222182 | 4_2:-28288553 | Msa0596800:CDS |
GAGATCTATAAAGGAATATT+TGG | 0.225703 | 4_2:-28286789 | Msa0596800:CDS |
GCAATTTGAAGGCTTTATTT+AGG | 0.233759 | 4_2:-28286962 | Msa0596800:CDS |
TCAACTTCAGAATCAACTTT+TGG | 0.240967 | 4_2:+28290996 | None:intergenic |
TGTGGTACTGGTTCAGGTCT+TGG | 0.262790 | 4_2:+28286765 | None:intergenic |
CTTGCAATTGCTTTATCTTC+AGG | 0.277406 | 4_2:+28286864 | None:intergenic |
GACTTCATGTTCCAGTTGTT+TGG | 0.278250 | 4_2:-28288350 | Msa0596800:CDS |
AGGTTCAAGGCTAATTTATT+TGG | 0.283449 | 4_2:+28286326 | None:intergenic |
TCTGCCATTGGTGGAACATT+TGG | 0.294220 | 4_2:+28288753 | None:intergenic |
GGTTACAAAACAAATTATTA+AGG | 0.302747 | 4_2:-28290958 | Msa0596800:CDS |
TTGGTAGCAATTACAAGGTT+AGG | 0.305350 | 4_2:+28286368 | None:intergenic |
TTATGGTGGTAGTCCATTAC+AGG | 0.321001 | 4_2:-28290251 | Msa0596800:intron |
CCAGTTGTTTGGGAAGTATA+GGG | 0.330723 | 4_2:-28288339 | Msa0596800:CDS |
TTGAACTTCCTCCATGTTGC+TGG | 0.331084 | 4_2:+28291336 | None:intergenic |
AAATGACTGGCTTGGGCATT+GGG | 0.332295 | 4_2:-28288860 | Msa0596800:CDS |
CTGCGTGTGAGCTGGGAATT+AGG | 0.336747 | 4_2:-28288804 | Msa0596800:CDS |
CGACCAATTGAGATGGTAAT+AGG | 0.338090 | 4_2:-28290177 | Msa0596800:CDS |
GTTTGGGAAGTATAGGGATA+TGG | 0.339954 | 4_2:-28288333 | Msa0596800:CDS |
ACTTCATGTTCCAGTTGTTT+GGG | 0.360386 | 4_2:-28288349 | Msa0596800:CDS |
AAAATGTTGTACCCTTTCAT+AGG | 0.375824 | 4_2:+28286586 | None:intergenic |
CCCTATACTTCCCAAACAAC+TGG | 0.377001 | 4_2:+28288339 | None:intergenic |
GGAATTGGTTCATATTTGTT+TGG | 0.380589 | 4_2:-28286737 | Msa0596800:CDS |
GTTTATGAAGTTGAGCTCAT+TGG | 0.387560 | 4_2:-28288726 | Msa0596800:CDS |
GGACTACTCAATAATTCTTC+AGG | 0.387637 | 4_2:+28291020 | None:intergenic |
AAGCAGAAGGAGATCTATAA+AGG | 0.387775 | 4_2:-28286798 | Msa0596800:CDS |
TCCAGTTGTTTGGGAAGTAT+AGG | 0.389067 | 4_2:-28288340 | Msa0596800:CDS |
GAGCGTTGCTGCGTGTGAGC+TGG | 0.407608 | 4_2:-28288812 | Msa0596800:CDS |
GTGAGCTGGGAATTAGGATA+TGG | 0.419661 | 4_2:-28288798 | Msa0596800:CDS |
TTTCCTATTACCATCTCAAT+TGG | 0.421411 | 4_2:+28290174 | None:intergenic |
TGTCAAACACGATTACTCTA+TGG | 0.424232 | 4_2:+28286481 | None:intergenic |
CATATTTGTTTGGCAGTGGT+TGG | 0.426113 | 4_2:-28286727 | Msa0596800:CDS |
GAAATGACTGGCTTGGGCAT+TGG | 0.428307 | 4_2:-28288861 | Msa0596800:CDS |
TGACTGTAGAGGAACGGATT+GGG | 0.429854 | 4_2:-28288596 | Msa0596800:CDS |
ACAGAAGCATGTTGAATACT+TGG | 0.438922 | 4_2:+28290914 | None:intergenic |
AAGAAAGAAATGACTGGCTT+GGG | 0.441743 | 4_2:-28288867 | Msa0596800:CDS |
GAAAGTACTGAATATGCAAA+AGG | 0.441865 | 4_2:-28291050 | Msa0596800:CDS |
TCTAAGGGAGAGAGAAATTG+AGG | 0.447949 | 4_2:+28291423 | None:intergenic |
TAAACTTTAGAGAAGGTTCA+AGG | 0.455714 | 4_2:+28286313 | None:intergenic |
ATGTCAGGCCATAGCTTACA+TGG | 0.460197 | 4_2:-28288378 | Msa0596800:intron |
TGGTAGCAATTACAAGGTTA+GGG | 0.460657 | 4_2:+28286369 | None:intergenic |
GAAGAAAGAAATGACTGGCT+TGG | 0.461382 | 4_2:-28288868 | Msa0596800:CDS |
TCTCAGACCACGCCCTGTAA+TGG | 0.475502 | 4_2:+28290238 | None:intergenic |
GGCCATGCAACAGTATGAAA+TGG | 0.476558 | 4_2:-28288514 | Msa0596800:intron |
AAAGTACTGAATATGCAAAA+GGG | 0.478686 | 4_2:-28291049 | Msa0596800:CDS |
CAGTACCACAGAAAAGGAAT+TGG | 0.480228 | 4_2:-28286752 | Msa0596800:CDS |
TTGGGCAGACAGATGTTGCC+AGG | 0.480432 | 4_2:-28286917 | Msa0596800:CDS |
GGGGTGGCAAGCATGAAAGC+TGG | 0.481889 | 4_2:-28288840 | Msa0596800:CDS |
GAAGTATAGGGATATGGCTC+TGG | 0.484336 | 4_2:-28288327 | Msa0596800:CDS |
ATTGAGATGGTAATAGGAAA+AGG | 0.485564 | 4_2:-28290171 | Msa0596800:intron |
GGCTTTATTTAGGAGAGGTA+AGG | 0.490198 | 4_2:-28286952 | Msa0596800:CDS |
CTGAACCAGTACCACAGAAA+AGG | 0.492954 | 4_2:-28286758 | Msa0596800:CDS |
GGGTGGCAAGCATGAAAGCT+GGG | 0.494339 | 4_2:-28288839 | Msa0596800:CDS |
GGTTCATATTTGTTTGGCAG+TGG | 0.498991 | 4_2:-28286731 | Msa0596800:CDS |
CAAATTATTAAGGAAGGTCA+TGG | 0.504301 | 4_2:-28290948 | Msa0596800:CDS |
TCATAAACTAAATCTGCCAT+TGG | 0.508037 | 4_2:+28288741 | None:intergenic |
TGAGGATGAGAGCAATTTGA+AGG | 0.509951 | 4_2:-28286973 | Msa0596800:CDS |
GTCTGTTGGTAGCAATTACA+AGG | 0.520857 | 4_2:+28286363 | None:intergenic |
ATGACTGTAGAGGAACGGAT+TGG | 0.522055 | 4_2:-28288597 | Msa0596800:CDS |
AACGGATTGGGGCAGCAGAT+CGG | 0.529421 | 4_2:-28288584 | Msa0596800:CDS |
TAAACTAAATCTGCCATTGG+TGG | 0.530780 | 4_2:+28288744 | None:intergenic |
AGCGTTGCTGCGTGTGAGCT+GGG | 0.534499 | 4_2:-28288811 | Msa0596800:CDS |
GGTAAGGCTAGAGCAGCACT+TGG | 0.543948 | 4_2:-28286936 | Msa0596800:CDS |
GTCATCTCCCATGTAAGCTA+TGG | 0.545323 | 4_2:+28288370 | None:intergenic |
GGCAGCAGATCGGAGAAAGA+TGG | 0.546425 | 4_2:-28288574 | Msa0596800:CDS |
AGTTGAAGTTCTTCATGAGA+AGG | 0.548105 | 4_2:-28290979 | Msa0596800:CDS |
TGGTAGTCCATTACAGGGCG+TGG | 0.549466 | 4_2:-28290245 | Msa0596800:intron |
ACAAAACAAATTATTAAGGA+AGG | 0.552128 | 4_2:-28290954 | Msa0596800:CDS |
TAAATTTGAAGATACATGGC+AGG | 0.555459 | 4_2:-28290205 | Msa0596800:CDS |
ATGTTGTACCCTTTCATAGG+TGG | 0.559299 | 4_2:+28286589 | None:intergenic |
AAGCATGTTGAATACTTGGA+AGG | 0.559903 | 4_2:+28290918 | None:intergenic |
GAATTAGGATATGGAAAGGA+AGG | 0.562161 | 4_2:-28288789 | Msa0596800:CDS |
CAGGGCGTGGTCTGAGAACA+CGG | 0.563793 | 4_2:-28290232 | Msa0596800:CDS |
TATGTGCATCCACCTATGAA+AGG | 0.567332 | 4_2:-28286598 | Msa0596800:three_prime_UTR |
ATGTGCATCCACCTATGAAA+GGG | 0.568546 | 4_2:-28286597 | Msa0596800:three_prime_UTR |
GCTAATTTATTTGGTAAACA+AGG | 0.569623 | 4_2:+28286335 | None:intergenic |
GACTGGCTTGGGCATTGGGG+TGG | 0.573654 | 4_2:-28288856 | Msa0596800:CDS |
AACCATTTCATACTGTTGCA+TGG | 0.576813 | 4_2:+28288512 | None:intergenic |
ACAGAGAAGAAAGAAATGAC+TGG | 0.578132 | 4_2:-28288873 | Msa0596800:intron |
GACTGTAGAGGAACGGATTG+GGG | 0.579307 | 4_2:-28288595 | Msa0596800:CDS |
AACAATAGTTGATGCAACAA+TGG | 0.579790 | 4_2:+28286621 | None:intergenic |
TTGAAGGCTTTATTTAGGAG+AGG | 0.585733 | 4_2:-28286957 | Msa0596800:CDS |
AGCATAAATTTGAAGATACA+TGG | 0.586003 | 4_2:-28290209 | Msa0596800:CDS |
CTGGGAATTAGGATATGGAA+AGG | 0.597900 | 4_2:-28288793 | Msa0596800:CDS |
GCAGATCGGAGAAAGATGGA+TGG | 0.599142 | 4_2:-28288570 | Msa0596800:CDS |
ATTAATGGGAAAATGAAATG+TGG | 0.605053 | 4_2:+28291374 | None:intergenic |
AAATAAATAAACTTTAGAGA+AGG | 0.606685 | 4_2:+28286306 | None:intergenic |
GTTTCAGGAAAATAAACTAG+AGG | 0.610535 | 4_2:-28288538 | Msa0596800:CDS |
TCAGGAAAATAAACTAGAGG+AGG | 0.614029 | 4_2:-28288535 | Msa0596800:CDS |
AAGTACTGAATATGCAAAAG+GGG | 0.616531 | 4_2:-28291048 | Msa0596800:CDS |
TAAACAAGGTACATGTCTGT+TGG | 0.617558 | 4_2:+28286349 | None:intergenic |
AGCTATTTATCAAAAGCAGA+AGG | 0.618624 | 4_2:-28286811 | Msa0596800:CDS |
GTAAGGCTAGAGCAGCACTT+GGG | 0.626696 | 4_2:-28286935 | Msa0596800:CDS |
AAACTTGCAGGTATTAAGTG+AGG | 0.627657 | 4_2:-28286991 | Msa0596800:intron |
AATGACTGGCTTGGGCATTG+GGG | 0.631535 | 4_2:-28288859 | Msa0596800:CDS |
GTGATATGACTGTAGAGGAA+CGG | 0.631871 | 4_2:-28288602 | Msa0596800:CDS |
AAATTATTAAGGAAGGTCAT+GGG | 0.635327 | 4_2:-28290947 | Msa0596800:CDS |
TATGGTGGTAGTCCATTACA+GGG | 0.637407 | 4_2:-28290250 | Msa0596800:intron |
TCGCAGTGATATGACTGTAG+AGG | 0.641089 | 4_2:-28288607 | Msa0596800:CDS |
TGGGCAGACAGATGTTGCCA+GGG | 0.643676 | 4_2:-28286916 | Msa0596800:CDS |
GGAGCAACGACCAATTGAGA+TGG | 0.655756 | 4_2:-28290184 | Msa0596800:CDS |
GGTGGCAAGCATGAAAGCTG+GGG | 0.672895 | 4_2:-28288838 | Msa0596800:CDS |
TGTCAGGCCATAGCTTACAT+GGG | 0.675965 | 4_2:-28288377 | Msa0596800:intron |
TCTCAACCACAATCAAAACC+AGG | 0.685386 | 4_2:-28291310 | Msa0596800:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAATATAAAATTAAT+GGG | + | chr4_2:28286410-28286429 | None:intergenic | 0.0% |
!! | AAAAAAAAATATAAAATTAA+TGG | + | chr4_2:28286411-28286430 | None:intergenic | 0.0% |
!!! | TATTTATTTTAGTAATTTCA+TGG | - | chr4_2:28287843-28287862 | Msa0596800:intron | 10.0% |
!! | CTATAATAAAATTATAATCA+TGG | - | chr4_2:28290038-28290057 | Msa0596800:intron | 10.0% |
!!! | AATTTAGTTTTTAAAACTGT+CGG | - | chr4_2:28287160-28287179 | Msa0596800:intron | 15.0% |
!!! | TTTACATAGTATTTTATGTT+GGG | + | chr4_2:28289577-28289596 | None:intergenic | 15.0% |
!!! | ATTTACATAGTATTTTATGT+TGG | + | chr4_2:28289578-28289597 | None:intergenic | 15.0% |
!!! | TAAAGAAATATTTTGATAGA+GGG | + | chr4_2:28289701-28289720 | None:intergenic | 15.0% |
!!! | TAAATTGTTATAGTATTTTC+TGG | - | chr4_2:28290687-28290706 | Msa0596800:intron | 15.0% |
!! | ATAAATGGAAATTAATTACC+TGG | + | chr4_2:28286478-28286497 | None:intergenic | 20.0% |
!! | GGTTACAAAACAAATTATTA+AGG | - | chr4_2:28286809-28286828 | Msa0596800:CDS | 20.0% |
!! | ACAAAACAAATTATTAAGGA+AGG | - | chr4_2:28286813-28286832 | Msa0596800:CDS | 20.0% |
!!! | AAATAATTTGAACTTGTTTG+TGG | - | chr4_2:28287026-28287045 | Msa0596800:intron | 20.0% |
!!! | AATAATTTGAACTTGTTTGT+GGG | - | chr4_2:28287027-28287046 | Msa0596800:intron | 20.0% |
!!! | TGTTGTTGCTTATTAAATTT+TGG | - | chr4_2:28287083-28287102 | Msa0596800:intron | 20.0% |
!!! | TTGCTTATTAAATTTTGGAA+CGG | - | chr4_2:28287088-28287107 | Msa0596800:intron | 20.0% |
!!! | GACAGTTTTAAAAACTAAAT+TGG | + | chr4_2:28287161-28287180 | None:intergenic | 20.0% |
!! | TTATAAACTGGTAATAGAAA+TGG | - | chr4_2:28287722-28287741 | Msa0596800:intron | 20.0% |
!!! | AGTAGAGTAAATTTTCATTT+TGG | - | chr4_2:28287757-28287776 | Msa0596800:intron | 20.0% |
!! | TAAAATAAATATACACTCAG+GGG | + | chr4_2:28287834-28287853 | None:intergenic | 20.0% |
!! | CTAAAATAAATATACACTCA+GGG | + | chr4_2:28287835-28287854 | None:intergenic | 20.0% |
!! | ACTAAAATAAATATACACTC+AGG | + | chr4_2:28287836-28287855 | None:intergenic | 20.0% |
!! | ACTATCAAAAGAGATATTTA+AGG | - | chr4_2:28287875-28287894 | Msa0596800:intron | 20.0% |
!!! | CAGAGATTTTTATGTAATTT+TGG | - | chr4_2:28287925-28287944 | Msa0596800:intron | 20.0% |
!! | CTTGATAAAAGTTTATAAAG+AGG | - | chr4_2:28288009-28288028 | Msa0596800:intron | 20.0% |
!!! | GTTGATAAAAGTTTATAAAG+AGG | - | chr4_2:28288213-28288232 | Msa0596800:intron | 20.0% |
!!! | GTTGATAAAAGTTTATAAAG+AGG | - | chr4_2:28288213-28288232 | Msa0596800:intron | 20.0% |
!! | TACTATGTAAATAAGCATTT+CGG | - | chr4_2:28289586-28289605 | Msa0596800:intron | 20.0% |
!!! | ATTGGTCTTTATTAATGTAA+GGG | + | chr4_2:28289669-28289688 | None:intergenic | 20.0% |
!!! | CTAAAGAAATATTTTGATAG+AGG | + | chr4_2:28289702-28289721 | None:intergenic | 20.0% |
!!! | ATTCCTTTTTATCTTATTGA+AGG | - | chr4_2:28290146-28290165 | Msa0596800:intron | 20.0% |
!!! | TTCCTTTTTATCTTATTGAA+GGG | - | chr4_2:28290147-28290166 | Msa0596800:intron | 20.0% |
!! | TAACAATTTACAAGTATGTT+AGG | + | chr4_2:28290677-28290696 | None:intergenic | 20.0% |
!! | AAATGTGGTTATGAATTTTC+CGG | + | chr4_2:28286381-28286400 | None:intergenic | 25.0% |
! | ATTAATGGGAAAATGAAATG+TGG | + | chr4_2:28286396-28286415 | None:intergenic | 25.0% |
!!! | TATTTTTTTTTCCAGCAACA+TGG | - | chr4_2:28286420-28286439 | Msa0596800:three_prime_UTR | 25.0% |
!! | TTTTCTTGACCTACAAAATA+AGG | + | chr4_2:28286675-28286694 | None:intergenic | 25.0% |
!!! | AAAGTACTGAATATGCAAAA+GGG | - | chr4_2:28286718-28286737 | Msa0596800:CDS | 25.0% |
! | AAATTATTAAGGAAGGTCAT+GGG | - | chr4_2:28286820-28286839 | Msa0596800:CDS | 25.0% |
! | ATTGAACGGATATATGTTTA+AGG | - | chr4_2:28287051-28287070 | Msa0596800:intron | 25.0% |
! | AGTTTCTGATATTCTCTTAT+AGG | - | chr4_2:28287230-28287249 | Msa0596800:intron | 25.0% |
! | AACAAAAGAAAATTTCCTCA+CGG | + | chr4_2:28287337-28287356 | None:intergenic | 25.0% |
! | AGCATAAATTTGAAGATACA+TGG | - | chr4_2:28287558-28287577 | Msa0596800:intron | 25.0% |
!!! | ATGCTTGAAGTTTAAAGTTT+TGG | - | chr4_2:28287620-28287639 | Msa0596800:intron | 25.0% |
! | AAAGAAATCCAATTGATCAA+TGG | + | chr4_2:28287657-28287676 | None:intergenic | 25.0% |
!! | TGATTTTCGTGTTTATAAAC+TGG | - | chr4_2:28287710-28287729 | Msa0596800:intron | 25.0% |
!! | AGAGTAAATTTTCATTTTGG+TGG | - | chr4_2:28287760-28287779 | Msa0596800:intron | 25.0% |
!!! | ATGTAATTTTGGTACATTCA+AGG | - | chr4_2:28287936-28287955 | Msa0596800:intron | 25.0% |
! | GATAAAAGTTTATAAAGAGG+AGG | - | chr4_2:28288012-28288031 | Msa0596800:intron | 25.0% |
! | GATAAAAGTTTATAAAGAGG+AGG | - | chr4_2:28288012-28288031 | Msa0596800:intron | 25.0% |
! | GATACAAGACTAATATTTAC+GGG | + | chr4_2:28288350-28288369 | None:intergenic | 25.0% |
! | GGATACAAGACTAATATTTA+CGG | + | chr4_2:28288351-28288370 | None:intergenic | 25.0% |
! | GATAAAAGTTTATAAAGAGG+AGG | - | chr4_2:28288012-28288031 | Msa0596800:intron | 25.0% |
! | GATACAAGACTAATATTTAC+GGG | + | chr4_2:28288350-28288369 | None:intergenic | 25.0% |
! | GGATACAAGACTAATATTTA+CGG | + | chr4_2:28288351-28288370 | None:intergenic | 25.0% |
! | GATACAAGACTAATATTTAC+AGG | + | chr4_2:28288350-28288369 | None:intergenic | 25.0% |
!!! | TCTTTAACAGACTTGTTATT+TGG | - | chr4_2:28288851-28288870 | Msa0596800:CDS | 25.0% |
!! | GTTTTCATTAAATTGTTGCA+TGG | - | chr4_2:28289087-28289106 | Msa0596800:intron | 25.0% |
! | TTATAGTGAGTAAAATTCAC+AGG | - | chr4_2:28289130-28289149 | Msa0596800:intron | 25.0% |
! | TATAGTGAGTAAAATTCACA+GGG | - | chr4_2:28289131-28289150 | Msa0596800:intron | 25.0% |
!! | AATTGCTGAAGAAAATTTTG+AGG | + | chr4_2:28289613-28289632 | None:intergenic | 25.0% |
!!! | TTGCTATTTCACAAATTTGA+GGG | + | chr4_2:28289640-28289659 | None:intergenic | 25.0% |
!!! | TTTGCTATTTCACAAATTTG+AGG | + | chr4_2:28289641-28289660 | None:intergenic | 25.0% |
!!! | GATTGGTCTTTATTAATGTA+AGG | + | chr4_2:28289670-28289689 | None:intergenic | 25.0% |
! | TGGTAGATAATCAAATTTGA+AGG | + | chr4_2:28289802-28289821 | None:intergenic | 25.0% |
! | CAAATTTGATTATCTACCAT+TGG | - | chr4_2:28289803-28289822 | Msa0596800:intron | 25.0% |
!!! | TAAATTGTTTTACCGAGTTT+TGG | - | chr4_2:28290005-28290024 | Msa0596800:intron | 25.0% |
!!! | AAATTGTTTTACCGAGTTTT+GGG | - | chr4_2:28290006-28290025 | Msa0596800:intron | 25.0% |
! | TTCCCTTCAATAAGATAAAA+AGG | + | chr4_2:28290152-28290171 | None:intergenic | 25.0% |
! | ATTTCCCTTGACTAAAAATA+TGG | + | chr4_2:28290275-28290294 | None:intergenic | 25.0% |
! | GAAAAACTTGAATCAAACAT+GGG | + | chr4_2:28290431-28290450 | None:intergenic | 25.0% |
! | AGAAAAACTTGAATCAAACA+TGG | + | chr4_2:28290432-28290451 | None:intergenic | 25.0% |
! | ACTAAATAAAAGTGAGAATG+AGG | + | chr4_2:28290592-28290611 | None:intergenic | 25.0% |
! | AGATATAGAATCATGTTACA+AGG | + | chr4_2:28290722-28290741 | None:intergenic | 25.0% |
! | GAGATCTATAAAGGAATATT+TGG | - | chr4_2:28290978-28290997 | Msa0596800:CDS | 25.0% |
!! | ATTTTATCTATGCTTGATGT+TGG | - | chr4_2:28291235-28291254 | Msa0596800:intron | 25.0% |
!! | TTTGTTCATAAGCATTTTGT+GGG | - | chr4_2:28291340-28291359 | Msa0596800:exon | 25.0% |
! | GCTAATTTATTTGGTAAACA+AGG | + | chr4_2:28291435-28291454 | None:intergenic | 25.0% |
!!! | TAATTACCTGGTTTTGATTG+TGG | + | chr4_2:28286466-28286485 | None:intergenic | 30.0% |
GTATCACATGAGTGAATAAA+TGG | + | chr4_2:28286493-28286512 | None:intergenic | 30.0% | |
TCGAATTTCATGTATGATTG+AGG | - | chr4_2:28286646-28286665 | Msa0596800:exon | 30.0% | |
!!! | TTGAGGAAACCTTATTTTGT+AGG | - | chr4_2:28286663-28286682 | Msa0596800:exon | 30.0% |
!! | GAAAGTACTGAATATGCAAA+AGG | - | chr4_2:28286717-28286736 | Msa0596800:CDS | 30.0% |
!! | AAGTACTGAATATGCAAAAG+GGG | - | chr4_2:28286719-28286738 | Msa0596800:CDS | 30.0% |
! | TCAACTTCAGAATCAACTTT+TGG | + | chr4_2:28286774-28286793 | None:intergenic | 30.0% |
CAAATTATTAAGGAAGGTCA+TGG | - | chr4_2:28286819-28286838 | Msa0596800:CDS | 30.0% | |
GTTTCATGCTAGTAGAAAAA+AGG | - | chr4_2:28286962-28286981 | Msa0596800:CDS | 30.0% | |
ACTAAATTGAACTACCAAAC+AGG | + | chr4_2:28287213-28287232 | None:intergenic | 30.0% | |
TATAGGAACTAATGTGTTCA+AGG | - | chr4_2:28287247-28287266 | Msa0596800:intron | 30.0% | |
! | TTTCAATGACCCAAATGTTT+TGG | - | chr4_2:28287307-28287326 | Msa0596800:intron | 30.0% |
!! | TCTTTTGTTTAGACTGAATG+TGG | - | chr4_2:28287348-28287367 | Msa0596800:intron | 30.0% |
!! | CTTTTGTTTAGACTGAATGT+GGG | - | chr4_2:28287349-28287368 | Msa0596800:intron | 30.0% |
AGGTGAAGCAAAAATGTATT+AGG | - | chr4_2:28287380-28287399 | Msa0596800:intron | 30.0% | |
GTAGAGGAGTAGATATTAAT+AGG | + | chr4_2:28287418-28287437 | None:intergenic | 30.0% | |
TCTAATTCATAACTATGACC+TGG | - | chr4_2:28287488-28287507 | Msa0596800:intron | 30.0% | |
TAAATTTGAAGATACATGGC+AGG | - | chr4_2:28287562-28287581 | Msa0596800:intron | 30.0% | |
TTTCCTATTACCATCTCAAT+TGG | + | chr4_2:28287596-28287615 | None:intergenic | 30.0% | |
ATTGAGATGGTAATAGGAAA+AGG | - | chr4_2:28287596-28287615 | Msa0596800:intron | 30.0% | |
ACGATTTAGAGAATAGATGT+AGG | + | chr4_2:28287690-28287709 | None:intergenic | 30.0% | |
TGATACCATGTTGAAATTTG+GGG | + | chr4_2:28288080-28288099 | None:intergenic | 30.0% | |
CTGATACCATGTTGAAATTT+GGG | + | chr4_2:28288081-28288100 | None:intergenic | 30.0% | |
TCTGATACCATGTTGAAATT+TGG | + | chr4_2:28288082-28288101 | None:intergenic | 30.0% | |
GTTGAACAAACTATACTCAT+TGG | + | chr4_2:28288377-28288396 | None:intergenic | 30.0% | |
!!! | GACTTGTTATTTGGTTTTGA+TGG | - | chr4_2:28288860-28288879 | Msa0596800:CDS | 30.0% |
TCATAAACTAAATCTGCCAT+TGG | + | chr4_2:28289029-28289048 | None:intergenic | 30.0% | |
GTTTCAGGAAAATAAACTAG+AGG | - | chr4_2:28289229-28289248 | Msa0596800:intron | 30.0% | |
! | ACTTGTGTTTCTTTTCTCTT+TGG | - | chr4_2:28289282-28289301 | Msa0596800:intron | 30.0% |
TCAATATGTAGGTCTTTCAT+CGG | + | chr4_2:28289741-28289760 | None:intergenic | 30.0% | |
GAGTATAGAAGTCAATATGT+AGG | + | chr4_2:28289752-28289771 | None:intergenic | 30.0% | |
!!! | TCTTGCCATATTTTTAGTCA+AGG | - | chr4_2:28290267-28290286 | Msa0596800:intron | 30.0% |
!!! | CTTGCCATATTTTTAGTCAA+GGG | - | chr4_2:28290268-28290287 | Msa0596800:intron | 30.0% |
! | ATTTTTACCAAAGTGAGCTT+TGG | - | chr4_2:28290394-28290413 | Msa0596800:intron | 30.0% |
TTAAAATTTCTGCGATTTCC+TGG | - | chr4_2:28290454-28290473 | Msa0596800:intron | 30.0% | |
TAAAATTTCTGCGATTTCCT+GGG | - | chr4_2:28290455-28290474 | Msa0596800:intron | 30.0% | |
AATGAGTGAATTATATCCCT+GGG | + | chr4_2:28290482-28290501 | None:intergenic | 30.0% | |
AAATGAGTGAATTATATCCC+TGG | + | chr4_2:28290483-28290502 | None:intergenic | 30.0% | |
TGAAAAGTTATAGTTGGTTG+AGG | + | chr4_2:28290565-28290584 | None:intergenic | 30.0% | |
GGTAAGTGAAAAGTTATAGT+TGG | + | chr4_2:28290571-28290590 | None:intergenic | 30.0% | |
TTTCAACAAATGACTTCTGT+TGG | + | chr4_2:28290759-28290778 | None:intergenic | 30.0% | |
!! | GCAATTTGAAGGCTTTATTT+AGG | - | chr4_2:28290805-28290824 | Msa0596800:intron | 30.0% |
AGCTATTTATCAAAAGCAGA+AGG | - | chr4_2:28290956-28290975 | Msa0596800:CDS | 30.0% | |
! | GGAATTGGTTCATATTTGTT+TGG | - | chr4_2:28291030-28291049 | Msa0596800:CDS | 30.0% |
!!! | CATCTTTGTGCTTTTTTTCA+CGG | + | chr4_2:28291100-28291119 | None:intergenic | 30.0% |
! | AACAATAGTTGATGCAACAA+TGG | + | chr4_2:28291149-28291168 | None:intergenic | 30.0% |
AAAATGTTGTACCCTTTCAT+AGG | + | chr4_2:28291184-28291203 | None:intergenic | 30.0% | |
! | GTTTGTTCATAAGCATTTTG+TGG | - | chr4_2:28291339-28291358 | Msa0596800:exon | 30.0% |
AGGTTCAAGGCTAATTTATT+TGG | + | chr4_2:28291444-28291463 | None:intergenic | 30.0% | |
CCGGAGAAACAAAAATCTAA+GGG | + | chr4_2:28286362-28286381 | None:intergenic | 35.0% | |
!! | CCCTTAGATTTTTGTTTCTC+CGG | - | chr4_2:28286359-28286378 | Msa0596800:three_prime_UTR | 35.0% |
TCCGGAGAAACAAAAATCTA+AGG | + | chr4_2:28286363-28286382 | None:intergenic | 35.0% | |
!!! | TTTTTTTTCCAGCAACATGG+AGG | - | chr4_2:28286423-28286442 | Msa0596800:three_prime_UTR | 35.0% |
ATCAAAGATGTGTCTGATGT+CGG | + | chr4_2:28286593-28286612 | None:intergenic | 35.0% | |
! | ACATCTTTGATCAGAAGTGT+TGG | - | chr4_2:28286602-28286621 | Msa0596800:three_prime_UTR | 35.0% |
GGACTACTCAATAATTCTTC+AGG | + | chr4_2:28286750-28286769 | None:intergenic | 35.0% | |
! | ACTTCAGAATCAACTTTTGG+AGG | + | chr4_2:28286771-28286790 | None:intergenic | 35.0% |
AGTTGAAGTTCTTCATGAGA+AGG | - | chr4_2:28286788-28286807 | Msa0596800:CDS | 35.0% | |
AAGCATGTTGAATACTTGGA+AGG | + | chr4_2:28286852-28286871 | None:intergenic | 35.0% | |
! | ACAGAAGCATGTTGAATACT+TGG | + | chr4_2:28286856-28286875 | None:intergenic | 35.0% |
ATTCAACATGCTTCTGTAAG+TGG | - | chr4_2:28286859-28286878 | Msa0596800:CDS | 35.0% | |
! | AGGTCTAGAATTGTTGAATG+TGG | - | chr4_2:28286982-28287001 | Msa0596800:CDS | 35.0% |
ACTTGTTTGTGGGAATTGAA+CGG | - | chr4_2:28287037-28287056 | Msa0596800:intron | 35.0% | |
CACGGTAAACCAAAACATTT+GGG | + | chr4_2:28287319-28287338 | None:intergenic | 35.0% | |
TCACGGTAAACCAAAACATT+TGG | + | chr4_2:28287320-28287339 | None:intergenic | 35.0% | |
!!! | AAATGTTTTGGTTTACCGTG+AGG | - | chr4_2:28287319-28287338 | Msa0596800:intron | 35.0% |
ATTCATAACTATGACCTGGA+TGG | - | chr4_2:28287492-28287511 | Msa0596800:intron | 35.0% | |
TCTTGTGTCCATTGATCAAT+TGG | - | chr4_2:28287646-28287665 | Msa0596800:intron | 35.0% | |
ATTTAAGGACCAAACTCACT+AGG | - | chr4_2:28287890-28287909 | Msa0596800:intron | 35.0% | |
ATTCAAGGACTACAGTGTAT+TGG | - | chr4_2:28287951-28287970 | Msa0596800:intron | 35.0% | |
TTCAAGGACTACAGTGTATT+GGG | - | chr4_2:28287952-28287971 | Msa0596800:intron | 35.0% | |
CTAACTCATCCTTACAAAAC+CGG | + | chr4_2:28288056-28288075 | None:intergenic | 35.0% | |
CTAACTCATCCTTACAAAAC+CGG | + | chr4_2:28288056-28288075 | None:intergenic | 35.0% | |
TGTCACTGTGTTGAAATTTG+GGG | + | chr4_2:28288283-28288302 | None:intergenic | 35.0% | |
CTGTCACTGTGTTGAAATTT+GGG | + | chr4_2:28288284-28288303 | None:intergenic | 35.0% | |
AGTAAACAACAATGCGTCAA+GGG | + | chr4_2:28288307-28288326 | None:intergenic | 35.0% | |
AAGTAAACAACAATGCGTCA+AGG | + | chr4_2:28288308-28288327 | None:intergenic | 35.0% | |
ACAAACTATACTCATTGGCA+TGG | + | chr4_2:28288372-28288391 | None:intergenic | 35.0% | |
! | TTGGGCTTGGTAATATTTAC+AGG | + | chr4_2:28288401-28288420 | None:intergenic | 35.0% |
CTAACTCATCCTTACAAAAC+CGG | + | chr4_2:28288056-28288075 | None:intergenic | 35.0% | |
TGTCACTGTGTTGAAATTTG+GGG | + | chr4_2:28288283-28288302 | None:intergenic | 35.0% | |
CTGTCACTGTGTTGAAATTT+GGG | + | chr4_2:28288284-28288303 | None:intergenic | 35.0% | |
AGTAAACAACAATGCGTCAA+GGG | + | chr4_2:28288307-28288326 | None:intergenic | 35.0% | |
AAGTAAACAACAATGCGTCA+AGG | + | chr4_2:28288308-28288327 | None:intergenic | 35.0% | |
GTTGAACAAACTATGCTCAT+TGG | + | chr4_2:28288649-28288668 | None:intergenic | 35.0% | |
ACAGAGAAGAAAGAAATGAC+TGG | - | chr4_2:28288894-28288913 | Msa0596800:intron | 35.0% | |
!! | AAGAAAGAAATGACTGGCTT+GGG | - | chr4_2:28288900-28288919 | Msa0596800:intron | 35.0% |
GAATTAGGATATGGAAAGGA+AGG | - | chr4_2:28288978-28288997 | Msa0596800:intron | 35.0% | |
! | TTTTCCAAATGTTCCACCAA+TGG | - | chr4_2:28289010-28289029 | Msa0596800:intron | 35.0% |
TAAACTAAATCTGCCATTGG+TGG | + | chr4_2:28289026-28289045 | None:intergenic | 35.0% | |
GTTTATGAAGTTGAGCTCAT+TGG | - | chr4_2:28289041-28289060 | Msa0596800:intron | 35.0% | |
ATTAAATTGTTGCATGGTCG+CGG | - | chr4_2:28289093-28289112 | Msa0596800:intron | 35.0% | |
TCAGGAAAATAAACTAGAGG+AGG | - | chr4_2:28289232-28289251 | Msa0596800:intron | 35.0% | |
AACCATTTCATACTGTTGCA+TGG | + | chr4_2:28289258-28289277 | None:intergenic | 35.0% | |
!! | GTTTGCTAAGTTGATTGTCT+TGG | - | chr4_2:28289363-28289382 | Msa0596800:intron | 35.0% |
ACTTCATGTTCCAGTTGTTT+GGG | - | chr4_2:28289418-28289437 | Msa0596800:intron | 35.0% | |
TATCTACCATTGGAGTTCAA+TGG | - | chr4_2:28289813-28289832 | Msa0596800:intron | 35.0% | |
TTTAGTCCATTGAACTCCAA+TGG | + | chr4_2:28289822-28289841 | None:intergenic | 35.0% | |
! | TTAAGTCCTTGGAGTTCTAA+GGG | + | chr4_2:28289882-28289901 | None:intergenic | 35.0% |
TTTAAGTCCTTGGAGTTCTA+AGG | + | chr4_2:28289883-28289902 | None:intergenic | 35.0% | |
! | TCAAAGTCATGCTGTTTGAT+TGG | - | chr4_2:28289936-28289955 | Msa0596800:intron | 35.0% |
TATGGCAAGATATGCTTAGT+AGG | + | chr4_2:28290257-28290276 | None:intergenic | 35.0% | |
TTACAATCCAAAGCTCACTT+TGG | + | chr4_2:28290404-28290423 | None:intergenic | 35.0% | |
CTATCATGGGAATGAAAAAG+CGG | + | chr4_2:28290509-28290528 | None:intergenic | 35.0% | |
GAAATGTCTCACTCTATCAT+GGG | + | chr4_2:28290522-28290541 | None:intergenic | 35.0% | |
ATAGAGTGAGACATTTCCAT+GGG | - | chr4_2:28290525-28290544 | Msa0596800:intron | 35.0% | |
AAAGTTATAGTTGGTTGAGG+AGG | + | chr4_2:28290562-28290581 | None:intergenic | 35.0% | |
! | AGTCATTTGTTGAAACTTGC+AGG | - | chr4_2:28290764-28290783 | Msa0596800:intron | 35.0% |
AAACTTGCAGGTATTAAGTG+AGG | - | chr4_2:28290776-28290795 | Msa0596800:intron | 35.0% | |
!! | TTGAAGGCTTTATTTAGGAG+AGG | - | chr4_2:28290810-28290829 | Msa0596800:intron | 35.0% |
!! | AGCTTTTAGAAAATCTTCCC+TGG | + | chr4_2:28290871-28290890 | None:intergenic | 35.0% |
CTTGCAATTGCTTTATCTTC+AGG | + | chr4_2:28290906-28290925 | None:intergenic | 35.0% | |
AAGCAGAAGGAGATCTATAA+AGG | - | chr4_2:28290969-28290988 | Msa0596800:CDS | 35.0% | |
! | ATGAACCAATTCCTTTTCTG+TGG | + | chr4_2:28291023-28291042 | None:intergenic | 35.0% |
! | TTTTTCACGGTTGAAAAGTG+TGG | + | chr4_2:28291087-28291106 | None:intergenic | 35.0% |
! | TACAACATTTTGAGCTACTG+AGG | - | chr4_2:28291193-28291212 | Msa0596800:intron | 35.0% |
TGTCAAACACGATTACTCTA+TGG | + | chr4_2:28291289-28291308 | None:intergenic | 35.0% | |
TGGTAGCAATTACAAGGTTA+GGG | + | chr4_2:28291401-28291420 | None:intergenic | 35.0% | |
! | TTGGTAGCAATTACAAGGTT+AGG | + | chr4_2:28291402-28291421 | None:intergenic | 35.0% |
TAAACAAGGTACATGTCTGT+TGG | + | chr4_2:28291421-28291440 | None:intergenic | 35.0% | |
TCTAAGGGAGAGAGAAATTG+AGG | + | chr4_2:28286347-28286366 | None:intergenic | 40.0% | |
TCTCAACCACAATCAAAACC+AGG | - | chr4_2:28286457-28286476 | Msa0596800:three_prime_UTR | 40.0% | |
AGAGCTCATAAGAAGAGTAG+AGG | + | chr4_2:28287434-28287453 | None:intergenic | 40.0% | |
ACTATGACCTGGATGGTTTA+TGG | - | chr4_2:28287499-28287518 | Msa0596800:intron | 40.0% | |
TTATGGTGGTAGTCCATTAC+AGG | - | chr4_2:28287516-28287535 | Msa0596800:intron | 40.0% | |
TATGGTGGTAGTCCATTACA+GGG | - | chr4_2:28287517-28287536 | Msa0596800:intron | 40.0% | |
CGACCAATTGAGATGGTAAT+AGG | - | chr4_2:28287590-28287609 | Msa0596800:intron | 40.0% | |
TGGTGGCTTAATGTGTAAGA+CGG | - | chr4_2:28287777-28287796 | Msa0596800:intron | 40.0% | |
!! | CGGTTTTGTAAGGATGAGTT+AGG | - | chr4_2:28288054-28288073 | Msa0596800:intron | 40.0% |
TTAGGCCCCAAATTTCAACA+TGG | - | chr4_2:28288072-28288091 | Msa0596800:intron | 40.0% | |
TCAGAGCTTGTCGAATTCAA+AGG | - | chr4_2:28288097-28288116 | Msa0596800:intron | 40.0% | |
GCTGTCACTGTGTTGAAATT+TGG | + | chr4_2:28288285-28288304 | None:intergenic | 40.0% | |
GCTGTCACTGTGTTGAAATT+TGG | + | chr4_2:28288285-28288304 | None:intergenic | 40.0% | |
ACAAACTATGCTCATTGGCA+TGG | + | chr4_2:28288644-28288663 | None:intergenic | 40.0% | |
! | TGTCATTTGCCAGAACTCAT+TGG | + | chr4_2:28288700-28288719 | None:intergenic | 40.0% |
! | AATGAGTTCTGGCAAATGAC+AGG | - | chr4_2:28288699-28288718 | Msa0596800:intron | 40.0% |
! | ATGAGTTCTGGCAAATGACA+GGG | - | chr4_2:28288700-28288719 | Msa0596800:intron | 40.0% |
TTATGACATCTAGCGTAGTG+TGG | - | chr4_2:28288791-28288810 | Msa0596800:CDS | 40.0% | |
! | GAAGAAAGAAATGACTGGCT+TGG | - | chr4_2:28288899-28288918 | Msa0596800:intron | 40.0% |
CTGGGAATTAGGATATGGAA+AGG | - | chr4_2:28288974-28288993 | Msa0596800:intron | 40.0% | |
GTGATATGACTGTAGAGGAA+CGG | - | chr4_2:28289165-28289184 | Msa0596800:intron | 40.0% | |
GGATGGAAATGTTCTGTTTC+AGG | - | chr4_2:28289214-28289233 | Msa0596800:intron | 40.0% | |
TGATTGTCTTGGTTCATGTC+AGG | - | chr4_2:28289374-28289393 | Msa0596800:intron | 40.0% | |
GACTTCATGTTCCAGTTGTT+TGG | - | chr4_2:28289417-28289436 | Msa0596800:intron | 40.0% | |
! | TCCAGTTGTTTGGGAAGTAT+AGG | - | chr4_2:28289427-28289446 | Msa0596800:intron | 40.0% |
! | CCAGTTGTTTGGGAAGTATA+GGG | - | chr4_2:28289428-28289447 | Msa0596800:intron | 40.0% |
! | GTTTGGGAAGTATAGGGATA+TGG | - | chr4_2:28289434-28289453 | Msa0596800:intron | 40.0% |
GAATCCATGCCATCTTAACA+CGG | - | chr4_2:28289470-28289489 | Msa0596800:intron | 40.0% | |
AACCGCTATGAAGAAGCTAT+AGG | - | chr4_2:28289513-28289532 | Msa0596800:intron | 40.0% | |
GTCCTATAGCTTCTTCATAG+CGG | + | chr4_2:28289518-28289537 | None:intergenic | 40.0% | |
GATAGAGGGACGAAATTGAT+TGG | + | chr4_2:28289687-28289706 | None:intergenic | 40.0% | |
!!! | AGGTCTTTCATCGGTTTTGA+TGG | + | chr4_2:28289732-28289751 | None:intergenic | 40.0% |
TCACTCAGCATTTAAGTCCT+TGG | + | chr4_2:28289893-28289912 | None:intergenic | 40.0% | |
AGTAGACTCAACCCAAAACT+CGG | + | chr4_2:28290020-28290039 | None:intergenic | 40.0% | |
!! | TGCTCACACTTTTTGTCGTA+AGG | - | chr4_2:28290123-28290142 | Msa0596800:intron | 40.0% |
CTGTCTAAGAATGCTTTCAC+TGG | + | chr4_2:28290218-28290237 | None:intergenic | 40.0% | |
GGAAATGTCTCACTCTATCA+TGG | + | chr4_2:28290523-28290542 | None:intergenic | 40.0% | |
GATAGAGTGAGACATTTCCA+TGG | - | chr4_2:28290524-28290543 | Msa0596800:intron | 40.0% | |
TGAGGATGAGAGCAATTTGA+AGG | - | chr4_2:28290794-28290813 | Msa0596800:intron | 40.0% | |
!! | GGCTTTATTTAGGAGAGGTA+AGG | - | chr4_2:28290815-28290834 | Msa0596800:intron | 40.0% |
! | CAATTCCTTTTCTGTGGTAC+TGG | + | chr4_2:28291017-28291036 | None:intergenic | 40.0% |
CAGTACCACAGAAAAGGAAT+TGG | - | chr4_2:28291015-28291034 | Msa0596800:CDS | 40.0% | |
GGTTCATATTTGTTTGGCAG+TGG | - | chr4_2:28291036-28291055 | Msa0596800:CDS | 40.0% | |
CATATTTGTTTGGCAGTGGT+TGG | - | chr4_2:28291040-28291059 | Msa0596800:CDS | 40.0% | |
TATGTGCATCCACCTATGAA+AGG | - | chr4_2:28291169-28291188 | Msa0596800:intron | 40.0% | |
ATGTGCATCCACCTATGAAA+GGG | - | chr4_2:28291170-28291189 | Msa0596800:intron | 40.0% | |
ATGTTGTACCCTTTCATAGG+TGG | + | chr4_2:28291181-28291200 | None:intergenic | 40.0% | |
!! | GTCTGTTGGTAGCAATTACA+AGG | + | chr4_2:28291407-28291426 | None:intergenic | 40.0% |
TTGAACTTCCTCCATGTTGC+TGG | + | chr4_2:28286434-28286453 | None:intergenic | 45.0% | |
TGTTGCGTCAGTGTTGTATC+TGG | + | chr4_2:28286521-28286540 | None:intergenic | 45.0% | |
!! | GAAGTGTTGGTGTTACAGAG+AGG | - | chr4_2:28286615-28286634 | Msa0596800:three_prime_UTR | 45.0% |
AGTCGTGTATCAGTCCTGTT+TGG | - | chr4_2:28287196-28287215 | Msa0596800:intron | 45.0% | |
ACTGAATGTGGGAACATGCT+AGG | - | chr4_2:28287360-28287379 | Msa0596800:intron | 45.0% | |
ATGACCTGGATGGTTTATGG+TGG | - | chr4_2:28287502-28287521 | Msa0596800:intron | 45.0% | |
ACTACCACCATAAACCATCC+AGG | + | chr4_2:28287509-28287528 | None:intergenic | 45.0% | |
GCATCTTGTCCTAGTGAGTT+TGG | + | chr4_2:28287902-28287921 | None:intergenic | 45.0% | |
GAAAAACCCAAGTCCCACAT+CGG | - | chr4_2:28287974-28287993 | Msa0596800:intron | 45.0% | |
ATCTATCCGATGTGGGACTT+GGG | + | chr4_2:28287983-28288002 | None:intergenic | 45.0% | |
GAGTCTCATCTATCCGATGT+GGG | + | chr4_2:28287990-28288009 | None:intergenic | 45.0% | |
AGAGTCTCATCTATCCGATG+TGG | + | chr4_2:28287991-28288010 | None:intergenic | 45.0% | |
!! | CCTTACAAAACCGGCTTGTA+AGG | + | chr4_2:28288047-28288066 | None:intergenic | 45.0% |
!! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr4_2:28288044-28288063 | Msa0596800:intron | 45.0% |
TTGGTACGTGAATAGGTAGG+CGG | + | chr4_2:28288123-28288142 | None:intergenic | 45.0% | |
! | TTTGGGCTTGGTACGTGAAT+AGG | + | chr4_2:28288130-28288149 | None:intergenic | 45.0% |
GAAAAACCCAAGTCCCACAT+CGG | - | chr4_2:28287974-28287993 | Msa0596800:intron | 45.0% | |
ATCTATCCGATGTGGGACTT+GGG | + | chr4_2:28287983-28288002 | None:intergenic | 45.0% | |
CAGTCTCATCTATCCGATGT+GGG | + | chr4_2:28288194-28288213 | None:intergenic | 45.0% | |
ACAGTCTCATCTATCCGATG+TGG | + | chr4_2:28288195-28288214 | None:intergenic | 45.0% | |
!! | CCTTACAAAACCGGCTTGTA+AGG | + | chr4_2:28288047-28288066 | None:intergenic | 45.0% |
!! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr4_2:28288044-28288063 | Msa0596800:intron | 45.0% |
GAAAAACCCAAGTCCCACAT+CGG | - | chr4_2:28287974-28287993 | Msa0596800:intron | 45.0% | |
ATCTATCCGATGTGGGACTT+GGG | + | chr4_2:28287983-28288002 | None:intergenic | 45.0% | |
CAGTCTCATCTATCCGATGT+GGG | + | chr4_2:28288194-28288213 | None:intergenic | 45.0% | |
ACAGTCTCATCTATCCGATG+TGG | + | chr4_2:28288195-28288214 | None:intergenic | 45.0% | |
!! | CCTTACAAAACCGGCTTGTA+AGG | + | chr4_2:28288047-28288066 | None:intergenic | 45.0% |
!! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr4_2:28288044-28288063 | Msa0596800:intron | 45.0% |
GTATCCATGCCAATGAGTTC+TGG | - | chr4_2:28288688-28288707 | Msa0596800:intron | 45.0% | |
TTTGCCAGAACTCATTGGCA+TGG | + | chr4_2:28288695-28288714 | None:intergenic | 45.0% | |
!! | AAATGACTGGCTTGGGCATT+GGG | - | chr4_2:28288907-28288926 | Msa0596800:intron | 45.0% |
GTGAGCTGGGAATTAGGATA+TGG | - | chr4_2:28288969-28288988 | Msa0596800:intron | 45.0% | |
TCTGCCATTGGTGGAACATT+TGG | + | chr4_2:28289017-28289036 | None:intergenic | 45.0% | |
TCGCAGTGATATGACTGTAG+AGG | - | chr4_2:28289160-28289179 | Msa0596800:intron | 45.0% | |
ATGACTGTAGAGGAACGGAT+TGG | - | chr4_2:28289170-28289189 | Msa0596800:intron | 45.0% | |
! | TGACTGTAGAGGAACGGATT+GGG | - | chr4_2:28289171-28289190 | Msa0596800:intron | 45.0% |
GGCCATGCAACAGTATGAAA+TGG | - | chr4_2:28289253-28289272 | Msa0596800:intron | 45.0% | |
ATGTCAGGCCATAGCTTACA+TGG | - | chr4_2:28289389-28289408 | Msa0596800:intron | 45.0% | |
TGTCAGGCCATAGCTTACAT+GGG | - | chr4_2:28289390-28289409 | Msa0596800:intron | 45.0% | |
GTCATCTCCCATGTAAGCTA+TGG | + | chr4_2:28289400-28289419 | None:intergenic | 45.0% | |
CCCTATACTTCCCAAACAAC+TGG | + | chr4_2:28289431-28289450 | None:intergenic | 45.0% | |
GAAGTATAGGGATATGGCTC+TGG | - | chr4_2:28289440-28289459 | Msa0596800:intron | 45.0% | |
AGCATGAGCGCACAATATTG+AGG | - | chr4_2:28290068-28290087 | Msa0596800:intron | 45.0% | |
GCATTCTTAGACAGAAGCTG+TGG | - | chr4_2:28290224-28290243 | Msa0596800:CDS | 45.0% | |
GGAGGTAATTTCTACTCCCA+TGG | + | chr4_2:28290544-28290563 | None:intergenic | 45.0% | |
!!! | CTTTTCTGTGGTACTGGTTC+AGG | + | chr4_2:28291011-28291030 | None:intergenic | 45.0% |
CTGAACCAGTACCACAGAAA+AGG | - | chr4_2:28291009-28291028 | Msa0596800:CDS | 45.0% | |
GGAGCAACGACCAATTGAGA+TGG | - | chr4_2:28287583-28287602 | Msa0596800:intron | 50.0% | |
CATCTATCCGATGTGGGACT+TGG | + | chr4_2:28287984-28288003 | None:intergenic | 50.0% | |
!! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr4_2:28288042-28288061 | None:intergenic | 50.0% |
! | GGCTTGGTACGTGAATAGGT+AGG | + | chr4_2:28288126-28288145 | None:intergenic | 50.0% |
!! | TACCAAGCCCAAAGAGTGCT+GGG | - | chr4_2:28288137-28288156 | Msa0596800:intron | 50.0% |
CATCTATCCGATGTGGGACT+TGG | + | chr4_2:28287984-28288003 | None:intergenic | 50.0% | |
!! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr4_2:28288042-28288061 | None:intergenic | 50.0% |
! | TTACCAAGCCCAAAGAGTGC+TGG | - | chr4_2:28288408-28288427 | Msa0596800:intron | 50.0% |
!! | TACCAAGCCCAAAGAGTGCT+GGG | - | chr4_2:28288137-28288156 | Msa0596800:intron | 50.0% |
CATCTATCCGATGTGGGACT+TGG | + | chr4_2:28287984-28288003 | None:intergenic | 50.0% | |
!! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr4_2:28288042-28288061 | None:intergenic | 50.0% |
!! | GAAATGACTGGCTTGGGCAT+TGG | - | chr4_2:28288906-28288925 | Msa0596800:intron | 50.0% |
!! | AATGACTGGCTTGGGCATTG+GGG | - | chr4_2:28288908-28288927 | Msa0596800:intron | 50.0% |
!! | GACTGTAGAGGAACGGATTG+GGG | - | chr4_2:28289172-28289191 | Msa0596800:intron | 50.0% |
GCAGATCGGAGAAAGATGGA+TGG | - | chr4_2:28289197-28289216 | Msa0596800:intron | 50.0% | |
TCCATGCCATCTTAACACGG+CGG | - | chr4_2:28289473-28289492 | Msa0596800:intron | 50.0% | |
GCGGTTCAGCTTAATCAGAC+AGG | + | chr4_2:28289499-28289518 | None:intergenic | 50.0% | |
TACCGACCCTTAGAACTCCA+AGG | - | chr4_2:28289873-28289892 | Msa0596800:intron | 50.0% | |
!! | GTCCTTGGAGTTCTAAGGGT+CGG | + | chr4_2:28289878-28289897 | None:intergenic | 50.0% |
GAATTATATCCCTGGGACCC+AGG | + | chr4_2:28290475-28290494 | None:intergenic | 50.0% | |
GTAAGGCTAGAGCAGCACTT+GGG | - | chr4_2:28290832-28290851 | Msa0596800:intron | 50.0% | |
!! | TGTGGTACTGGTTCAGGTCT+TGG | + | chr4_2:28291005-28291024 | None:intergenic | 50.0% |
GGAACGGCTTTCGTCGTATC+TGG | - | chr4_2:28287104-28287123 | Msa0596800:intron | 55.0% | |
TGGTAGTCCATTACAGGGCG+TGG | - | chr4_2:28287522-28287541 | Msa0596800:intron | 55.0% | |
TCTCAGACCACGCCCTGTAA+TGG | + | chr4_2:28287532-28287551 | None:intergenic | 55.0% | |
GCACTCCTCACCTTACAAGC+CGG | - | chr4_2:28288034-28288053 | Msa0596800:intron | 55.0% | |
! | GTACCAAGCCCAAAGAGTGC+TGG | - | chr4_2:28288136-28288155 | Msa0596800:intron | 55.0% |
! | TGGGCGTGAGGAGGTGTATT+GGG | - | chr4_2:28288156-28288175 | Msa0596800:intron | 55.0% |
GCACTCCTCACCTTACAAGC+CGG | - | chr4_2:28288034-28288053 | Msa0596800:intron | 55.0% | |
! | TGGGCGTGAGGAGGTGTATT+GGG | - | chr4_2:28288156-28288175 | Msa0596800:intron | 55.0% |
GCACTCCTCACCTTACAAGC+CGG | - | chr4_2:28288034-28288053 | Msa0596800:intron | 55.0% | |
GGGTGGCAAGCATGAAAGCT+GGG | - | chr4_2:28288928-28288947 | Msa0596800:intron | 55.0% | |
GGTGGCAAGCATGAAAGCTG+GGG | - | chr4_2:28288929-28288948 | Msa0596800:intron | 55.0% | |
CTGCGTGTGAGCTGGGAATT+AGG | - | chr4_2:28288963-28288982 | Msa0596800:intron | 55.0% | |
!! | AACGGATTGGGGCAGCAGAT+CGG | - | chr4_2:28289183-28289202 | Msa0596800:intron | 55.0% |
GGCAGCAGATCGGAGAAAGA+TGG | - | chr4_2:28289193-28289212 | Msa0596800:intron | 55.0% | |
GGTAAGGCTAGAGCAGCACT+TGG | - | chr4_2:28290831-28290850 | Msa0596800:intron | 55.0% | |
TTGGGCAGACAGATGTTGCC+AGG | - | chr4_2:28290850-28290869 | Msa0596800:intron | 55.0% | |
TGGGCAGACAGATGTTGCCA+GGG | - | chr4_2:28290851-28290870 | Msa0596800:intron | 55.0% | |
CAGGGCGTGGTCTGAGAACA+CGG | - | chr4_2:28287535-28287554 | Msa0596800:intron | 60.0% | |
CCTCACGCCCAGCACTCTTT+GGG | + | chr4_2:28288147-28288166 | None:intergenic | 60.0% | |
TCCTCACGCCCAGCACTCTT+TGG | + | chr4_2:28288148-28288167 | None:intergenic | 60.0% | |
!! | AAAGAGTGCTGGGCGTGAGG+AGG | - | chr4_2:28288147-28288166 | Msa0596800:intron | 60.0% |
! | CTGGGCGTGAGGAGGTGTAT+TGG | - | chr4_2:28288155-28288174 | Msa0596800:intron | 60.0% |
CCTCACGCCCAGCACTCTTT+GGG | + | chr4_2:28288147-28288166 | None:intergenic | 60.0% | |
TCCTCACGCCCAGCACTCTT+TGG | + | chr4_2:28288148-28288167 | None:intergenic | 60.0% | |
!! | AAAGAGTGCTGGGCGTGAGG+AGG | - | chr4_2:28288147-28288166 | Msa0596800:intron | 60.0% |
! | CTGGGCGTGAGGAGGTGTAT+TGG | - | chr4_2:28288155-28288174 | Msa0596800:intron | 60.0% |
GGGGTGGCAAGCATGAAAGC+TGG | - | chr4_2:28288927-28288946 | Msa0596800:intron | 60.0% | |
AGCGTTGCTGCGTGTGAGCT+GGG | - | chr4_2:28288956-28288975 | Msa0596800:intron | 60.0% | |
GCCGCCGTGTTAAGATGGCA+TGG | + | chr4_2:28289477-28289496 | None:intergenic | 60.0% | |
GACAGGCCGCCGTGTTAAGA+TGG | + | chr4_2:28289482-28289501 | None:intergenic | 60.0% | |
TCTGCGATTTCCTGGGTCCC+AGG | - | chr4_2:28290462-28290481 | Msa0596800:intron | 60.0% | |
CTGCGATTTCCTGGGTCCCA+GGG | - | chr4_2:28290463-28290482 | Msa0596800:intron | 60.0% | |
CGCCCAGCACTCTTTGGGCT+TGG | + | chr4_2:28288142-28288161 | None:intergenic | 65.0% | |
!! | CCCAAAGAGTGCTGGGCGTG+AGG | - | chr4_2:28288144-28288163 | Msa0596800:intron | 65.0% |
CGCCCAGCACTCTTTGGGCT+TGG | + | chr4_2:28288142-28288161 | None:intergenic | 65.0% | |
!! | CCCAAAGAGTGCTGGGCGTG+AGG | - | chr4_2:28288144-28288163 | Msa0596800:intron | 65.0% |
!! | GACTGGCTTGGGCATTGGGG+TGG | - | chr4_2:28288911-28288930 | Msa0596800:intron | 65.0% |
! | GAGCGTTGCTGCGTGTGAGC+TGG | - | chr4_2:28288955-28288974 | Msa0596800:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 28286318 | 28291471 | 28286318 | ID=Msa0596800;Name=Msa0596800 |
chr4_2 | mRNA | 28286318 | 28291471 | 28286318 | ID=Msa0596800-mRNA-1;Parent=Msa0596800;Name=Msa0596800-mRNA-1;_AED=0.10;_eAED=0.10;_QI=121|0.83|0.85|1|0.83|0.57|7|347|344 |
chr4_2 | exon | 28286318 | 28287003 | 28286318 | ID=Msa0596800-mRNA-1:exon:7297;Parent=Msa0596800-mRNA-1 |
chr4_2 | exon | 28288325 | 28288393 | 28288325 | ID=Msa0596800-mRNA-1:exon:7296;Parent=Msa0596800-mRNA-1 |
chr4_2 | exon | 28288515 | 28288637 | 28288515 | ID=Msa0596800-mRNA-1:exon:7295;Parent=Msa0596800-mRNA-1 |
chr4_2 | exon | 28288707 | 28288891 | 28288707 | ID=Msa0596800-mRNA-1:exon:7294;Parent=Msa0596800-mRNA-1 |
chr4_2 | exon | 28290172 | 28290261 | 28290172 | ID=Msa0596800-mRNA-1:exon:7293;Parent=Msa0596800-mRNA-1 |
chr4_2 | exon | 28290916 | 28291104 | 28290916 | ID=Msa0596800-mRNA-1:exon:7292;Parent=Msa0596800-mRNA-1 |
chr4_2 | exon | 28291311 | 28291471 | 28291311 | ID=Msa0596800-mRNA-1:exon:7291;Parent=Msa0596800-mRNA-1 |
chr4_2 | five_prime_UTR | 28291351 | 28291471 | 28291351 | ID=Msa0596800-mRNA-1:five_prime_utr;Parent=Msa0596800-mRNA-1 |
chr4_2 | CDS | 28291311 | 28291350 | 28291311 | ID=Msa0596800-mRNA-1:cds;Parent=Msa0596800-mRNA-1 |
chr4_2 | CDS | 28290916 | 28291104 | 28290916 | ID=Msa0596800-mRNA-1:cds;Parent=Msa0596800-mRNA-1 |
chr4_2 | CDS | 28290172 | 28290261 | 28290172 | ID=Msa0596800-mRNA-1:cds;Parent=Msa0596800-mRNA-1 |
chr4_2 | CDS | 28288707 | 28288891 | 28288707 | ID=Msa0596800-mRNA-1:cds;Parent=Msa0596800-mRNA-1 |
chr4_2 | CDS | 28288515 | 28288637 | 28288515 | ID=Msa0596800-mRNA-1:cds;Parent=Msa0596800-mRNA-1 |
chr4_2 | CDS | 28288325 | 28288393 | 28288325 | ID=Msa0596800-mRNA-1:cds;Parent=Msa0596800-mRNA-1 |
chr4_2 | CDS | 28286665 | 28287003 | 28286665 | ID=Msa0596800-mRNA-1:cds;Parent=Msa0596800-mRNA-1 |
chr4_2 | three_prime_UTR | 28286318 | 28286664 | 28286318 | ID=Msa0596800-mRNA-1:three_prime_utr;Parent=Msa0596800-mRNA-1 |
Gene Sequence |
Protein sequence |