Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260320 | XP_013458009.1 | 94.462 | 325 | 18 | 0 | 1 | 325 | 1 | 325 | 0.0 | 623 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260320 | sp|Q9FZ81|RBL12_ARATH | 60.662 | 272 | 93 | 5 | 61 | 325 | 70 | 334 | 4.47e-97 | 293 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010890 | Msa1260320 | 0.808468 | 3.051775e-50 | -8.615850e-47 |
| Msa0012080 | Msa1260320 | 0.802674 | 5.016345e-49 | -8.615850e-47 |
| Msa0029270 | Msa1260320 | 0.810745 | 9.895368e-51 | -8.615850e-47 |
| Msa0041480 | Msa1260320 | -0.813128 | 2.993834e-51 | -8.615850e-47 |
| Msa0061290 | Msa1260320 | 0.800349 | 1.502855e-48 | -8.615850e-47 |
| Msa0115080 | Msa1260320 | 0.803930 | 2.756160e-49 | -8.615850e-47 |
| Msa0716830 | Msa1260320 | 0.804586 | 2.011510e-49 | -8.615850e-47 |
| Msa0793800 | Msa1260320 | 0.831220 | 1.888640e-55 | -8.615850e-47 |
| Msa0826570 | Msa1260320 | 0.801255 | 9.813673e-49 | -8.615850e-47 |
| Msa0831530 | Msa1260320 | 0.802116 | 6.536726e-49 | -8.615850e-47 |
| Msa0152350 | Msa1260320 | 0.803533 | 3.332218e-49 | -8.615850e-47 |
| Msa0168500 | Msa1260320 | 0.801447 | 8.964131e-49 | -8.615850e-47 |
| Msa0187120 | Msa1260320 | 0.818802 | 1.620995e-52 | -8.615850e-47 |
| Msa0220720 | Msa1260320 | 0.823976 | 1.036592e-53 | -8.615850e-47 |
| Msa1225700 | Msa1260320 | 0.839582 | 1.453422e-57 | -8.615850e-47 |
| Msa1260320 | Msa1330410 | 0.818603 | 1.798334e-52 | -8.615850e-47 |
| Msa1260320 | Msa1353330 | 0.813251 | 2.814118e-51 | -8.615850e-47 |
| Msa1260320 | Msa1403420 | 0.834746 | 2.507385e-56 | -8.615850e-47 |
| Msa1260320 | Msa1446950 | 0.808532 | 2.956883e-50 | -8.615850e-47 |
| Msa0402650 | Msa1260320 | 0.818420 | 1.978827e-52 | -8.615850e-47 |
| Msa0402790 | Msa1260320 | 0.800811 | 1.209460e-48 | -8.615850e-47 |
| Msa0449210 | Msa1260320 | 0.833540 | 5.029831e-56 | -8.615850e-47 |
| Msa1079440 | Msa1260320 | 0.840884 | 6.643946e-58 | -8.615850e-47 |
| Msa1089940 | Msa1260320 | 0.807240 | 5.566233e-50 | -8.615850e-47 |
| Msa1093270 | Msa1260320 | 0.803934 | 2.749945e-49 | -8.615850e-47 |
| Msa1106700 | Msa1260320 | 0.809883 | 1.518000e-50 | -8.615850e-47 |
| Msa0283800 | Msa1260320 | 0.805801 | 1.120232e-49 | -8.615850e-47 |
| Msa0299870 | Msa1260320 | 0.819339 | 1.223474e-52 | -8.615850e-47 |
| Msa0337240 | Msa1260320 | 0.810024 | 1.415389e-50 | -8.615850e-47 |
| Msa0337620 | Msa1260320 | 0.805265 | 1.450794e-49 | -8.615850e-47 |
| Msa0529830 | Msa1260320 | 0.830289 | 3.193443e-55 | -8.615850e-47 |
| Msa0585510 | Msa1260320 | 0.839533 | 1.496929e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260320 | MtrunA17_Chr4g0061591 | 94.462 | 325 | 18 | 0 | 1 | 325 | 1 | 325 | 0.0 | 623 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260320 | AT1G18600.1 | 60.662 | 272 | 93 | 5 | 61 | 325 | 70 | 334 | 4.54e-98 | 293 |
| Msa1260320 | AT1G74130.1 | 35.484 | 310 | 166 | 10 | 30 | 325 | 31 | 320 | 3.55e-53 | 177 |
| Msa1260320 | AT1G74140.5 | 40.991 | 222 | 110 | 8 | 114 | 325 | 110 | 320 | 8.26e-43 | 150 |
| Msa1260320 | AT1G74140.1 | 40.991 | 222 | 107 | 8 | 114 | 325 | 110 | 317 | 1.89e-42 | 149 |
| Msa1260320 | AT1G74130.2 | 34.050 | 279 | 152 | 9 | 30 | 296 | 31 | 289 | 3.40e-42 | 148 |
| Msa1260320 | AT1G74140.4 | 39.091 | 220 | 103 | 7 | 114 | 325 | 110 | 306 | 3.08e-39 | 140 |
| Msa1260320 | AT1G74140.3 | 37.838 | 222 | 98 | 8 | 114 | 325 | 110 | 301 | 8.17e-32 | 121 |
| Msa1260320 | AT1G74140.2 | 37.838 | 222 | 95 | 8 | 114 | 325 | 110 | 298 | 2.45e-31 | 119 |
Find 90 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCAGATTGCAAGTAAATT+TGG | 0.127860 | 8_2:-62238534 | Msa1260320:intron |
| AGCAATTTCCTTAAATAAAA+TGG | 0.190591 | 8_2:+62236421 | None:intergenic |
| TATAAATTAGGTGAAGTTAT+TGG | 0.205309 | 8_2:-62236596 | Msa1260320:three_prime_UTR |
| TTAATTAGCAACTATAAATT+AGG | 0.220500 | 8_2:-62236608 | Msa1260320:three_prime_UTR |
| ATGCTTGGACTCTACTTCTT+TGG | 0.221067 | 8_2:-62239610 | Msa1260320:CDS |
| GGAGAAAGAGGAACGAATTT+TGG | 0.227418 | 8_2:+62240974 | None:intergenic |
| GACACCAGATGACGTGGTTC+TGG | 0.230010 | 8_2:-62240298 | Msa1260320:CDS |
| GACAGAACTACATTTCAAAT+TGG | 0.283737 | 8_2:-62240869 | Msa1260320:CDS |
| ATAAATTAGGTGAAGTTATT+GGG | 0.290730 | 8_2:-62236595 | Msa1260320:three_prime_UTR |
| TGAAGGTGAGGTTGGGTTGA+AGG | 0.308866 | 8_2:+62241111 | None:intergenic |
| ACCAGTTCCTGCGGCGTTGC+TGG | 0.311615 | 8_2:-62237433 | Msa1260320:intron |
| CTATATCTTGCTGGCGCAAT+TGG | 0.317104 | 8_2:-62238492 | Msa1260320:CDS |
| TATAGCTTCAGCAGAAATTC+AGG | 0.326477 | 8_2:+62238510 | None:intergenic |
| ATCAGATTGCAAGTAAATTT+GGG | 0.330197 | 8_2:-62238533 | Msa1260320:intron |
| CTTTGATGTTAGAGACTTGT+AGG | 0.345445 | 8_2:+62238440 | None:intergenic |
| GCAGGAGATTGTGGCTAAAC+AGG | 0.348440 | 8_2:-62240323 | Msa1260320:intron |
| CTGCTGAAGCTATATCTTGC+TGG | 0.359474 | 8_2:-62238501 | Msa1260320:CDS |
| GATATCAGGATCTGCACATT+TGG | 0.362814 | 8_2:-62236759 | Msa1260320:CDS |
| GCTACGATCAATGATGCTTT+TGG | 0.365535 | 8_2:+62240914 | None:intergenic |
| TGGGTTGAAGGTGGTGGTGG+TGG | 0.369368 | 8_2:+62241123 | None:intergenic |
| GTGAGGGTTGAAGGTGAGGT+TGG | 0.371478 | 8_2:+62241103 | None:intergenic |
| TAGGGAGACAGTGCGATATC+AGG | 0.388761 | 8_2:-62236773 | Msa1260320:CDS |
| TTCAAGTATATAGTTGCTCT+TGG | 0.389439 | 8_2:+62237465 | None:intergenic |
| ACACCAGATGACGTGGTTCT+GGG | 0.403748 | 8_2:-62240297 | Msa1260320:CDS |
| GGTTGGGTTGAAGGTGGTGG+TGG | 0.408905 | 8_2:+62241120 | None:intergenic |
| CATTTAATGTCCAACATGCT+TGG | 0.418509 | 8_2:-62239625 | Msa1260320:CDS |
| AGGAATGTGGTGGTTTAGAT+TGG | 0.427442 | 8_2:+62241037 | None:intergenic |
| TGAGGTTGGGTTGAAGGTGG+TGG | 0.427891 | 8_2:+62241117 | None:intergenic |
| GGAGATACGGTGAGGGTTGA+AGG | 0.429536 | 8_2:+62241094 | None:intergenic |
| AACCCCAGAACCACGTCATC+TGG | 0.431625 | 8_2:+62240294 | None:intergenic |
| CTGTCGATGAAAATGAACTC+TGG | 0.434382 | 8_2:+62240887 | None:intergenic |
| TGAGGGTTGAAGGTGAGGTT+GGG | 0.435029 | 8_2:+62241104 | None:intergenic |
| ACCAGCAACGCCGCAGGAAC+TGG | 0.440265 | 8_2:+62237432 | None:intergenic |
| GCTCGCGGTGTCAATGTAGT+TGG | 0.442848 | 8_2:-62236477 | Msa1260320:three_prime_UTR |
| TTCTTCGAAAGATCATTGAT+TGG | 0.447627 | 8_2:+62240952 | None:intergenic |
| ATATCAGGATCTGCACATTT+GGG | 0.448175 | 8_2:-62236758 | Msa1260320:CDS |
| TCTTCGAAAGATCATTGATT+GGG | 0.451663 | 8_2:+62240953 | None:intergenic |
| CCATAGCATGGTCAAGAGTT+CGG | 0.457547 | 8_2:-62236718 | Msa1260320:CDS |
| CTTCTTCCGCCATTCACTCA+TGG | 0.466264 | 8_2:-62241010 | Msa1260320:CDS |
| TCTTGTTTGCAACAGGGCTA+TGG | 0.467275 | 8_2:-62238074 | Msa1260320:intron |
| TATCTTGCTGGCGCAATTGG+TGG | 0.476126 | 8_2:-62238489 | Msa1260320:CDS |
| GAGCTTAGTTCGGCGGTTCA+CGG | 0.483010 | 8_2:-62241165 | Msa1260320:CDS |
| AGGTGAGGTTGGGTTGAAGG+TGG | 0.483066 | 8_2:+62241114 | None:intergenic |
| GGTGGTTTAGATTGGAGGGT+TGG | 0.486733 | 8_2:+62241045 | None:intergenic |
| GATCATTGATTGGGAGAAAG+AGG | 0.487060 | 8_2:+62240962 | None:intergenic |
| CTCGCGGTGTCAATGTAGTT+GGG | 0.489692 | 8_2:-62236476 | Msa1260320:three_prime_UTR |
| ATATAGTTGCTCTTGGATTG+AGG | 0.494470 | 8_2:+62237472 | None:intergenic |
| ACAGGGCTATGGCGCGATCA+AGG | 0.496297 | 8_2:-62238063 | Msa1260320:intron |
| GGCTTCAAAGGATTTAGCAT+TGG | 0.497089 | 8_2:-62238042 | Msa1260320:intron |
| AATGTGGTGGTTTAGATTGG+AGG | 0.509707 | 8_2:+62241040 | None:intergenic |
| CAAAAGAATTGAAATAGAGT+AGG | 0.510885 | 8_2:+62236448 | None:intergenic |
| TGTCGATGAAAATGAACTCT+GGG | 0.511770 | 8_2:+62240888 | None:intergenic |
| TACGGTGAGGGTTGAAGGTG+AGG | 0.512141 | 8_2:+62241099 | None:intergenic |
| AAGGGAACGCCATGAGTGAA+TGG | 0.517164 | 8_2:+62241001 | None:intergenic |
| CCGAACTCTTGACCATGCTA+TGG | 0.521181 | 8_2:+62236718 | None:intergenic |
| ATGTGGTGGTTTAGATTGGA+GGG | 0.523563 | 8_2:+62241041 | None:intergenic |
| CATGTTGGACATTAAATGCC+AGG | 0.532362 | 8_2:+62239630 | None:intergenic |
| CATGAGTGAATGGCGGAAGA+AGG | 0.533160 | 8_2:+62241011 | None:intergenic |
| CGGAAGAAGGTGAAGGAATG+TGG | 0.536318 | 8_2:+62241024 | None:intergenic |
| TCCAATGATTAGGGAGCAAG+TGG | 0.538219 | 8_2:-62237528 | Msa1260320:intron |
| GGTTGGACGATGTGAGTTGA+AGG | 0.542009 | 8_2:+62241062 | None:intergenic |
| CATTCAGTCATGTAGATGCC+TGG | 0.544602 | 8_2:-62239648 | Msa1260320:CDS |
| AAGGACGAGTGTGGGAGATA+CGG | 0.554278 | 8_2:+62241081 | None:intergenic |
| AAAAGAATTGAAATAGAGTA+GGG | 0.554411 | 8_2:+62236449 | None:intergenic |
| AGATATGCTGAGGATAATAG+AGG | 0.557356 | 8_2:-62237290 | Msa1260320:intron |
| ATAATTCGTATCGGAGTGGT+TGG | 0.559072 | 8_2:-62240842 | Msa1260320:intron |
| CTACAAGTCTCTAACATCAA+AGG | 0.563755 | 8_2:-62238439 | Msa1260320:intron |
| GAAGTAGAGTCCAAGCATGT+TGG | 0.565236 | 8_2:+62239615 | None:intergenic |
| CAGCTTACCAGCAACGCCGC+AGG | 0.572037 | 8_2:+62237426 | None:intergenic |
| TGGCGCGATCAAGGCTTCAA+AGG | 0.573750 | 8_2:-62238054 | Msa1260320:CDS |
| ATCTACATGACTGAATGCAT+TGG | 0.587624 | 8_2:+62239654 | None:intergenic |
| TCTTTAGACAATATTAAGAG+TGG | 0.590600 | 8_2:-62239697 | Msa1260320:CDS |
| TGATCGGAAAAGATATGCTG+AGG | 0.592421 | 8_2:-62237300 | Msa1260320:CDS |
| ATTGGAATAATAATTCGTAT+CGG | 0.595875 | 8_2:-62240851 | Msa1260320:CDS |
| CACCAGATGACGTGGTTCTG+GGG | 0.602466 | 8_2:-62240296 | Msa1260320:CDS |
| TTGCAGTTGCAGCCATAGCA+TGG | 0.613540 | 8_2:-62236730 | Msa1260320:CDS |
| TCAGGATCTGCACATTTGGG+TGG | 0.628970 | 8_2:-62236755 | Msa1260320:CDS |
| AAATGCAGAGCTTAGTTCGG+CGG | 0.635169 | 8_2:-62241172 | Msa1260320:CDS |
| CAGGCTGACACCAGATGACG+TGG | 0.635192 | 8_2:-62240304 | Msa1260320:CDS |
| AATAATAATTCGTATCGGAG+TGG | 0.642796 | 8_2:-62240846 | Msa1260320:CDS |
| AAGAAGGTGAAGGAATGTGG+TGG | 0.648391 | 8_2:+62241027 | None:intergenic |
| TGTGAGTTGAAGGACGAGTG+TGG | 0.658693 | 8_2:+62241072 | None:intergenic |
| GTGAGTTGAAGGACGAGTGT+GGG | 0.670836 | 8_2:+62241073 | None:intergenic |
| TGAATGGCGGAAGAAGGTGA+AGG | 0.678778 | 8_2:+62241017 | None:intergenic |
| GCATGGTCAAGAGTTCGGAA+AGG | 0.680049 | 8_2:-62236713 | Msa1260320:CDS |
| CGAGTGTGGGAGATACGGTG+AGG | 0.681414 | 8_2:+62241086 | None:intergenic |
| TATGAACTTACTAGTGCTCG+CGG | 0.699567 | 8_2:-62236492 | Msa1260320:three_prime_UTR |
| GAGTGTGGGAGATACGGTGA+GGG | 0.708234 | 8_2:+62241087 | None:intergenic |
| GGAACGCCATGAGTGAATGG+CGG | 0.713842 | 8_2:+62241004 | None:intergenic |
| CTTAGTTCGGCGGTTCACGG+CGG | 0.738046 | 8_2:-62241162 | Msa1260320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTATTTATTAAA+AGG | + | chr8_2:62240703-62240722 | None:intergenic | 0.0% |
| !!! | TTTCTTTTTAAAAAAAATTC+TGG | - | chr8_2:62239248-62239267 | Msa1260320:intron | 10.0% |
| !!! | TTCTTTTTAAAAAAAATTCT+GGG | - | chr8_2:62239249-62239268 | Msa1260320:intron | 10.0% |
| !!! | CAAAAAAAAAATTGATAATA+AGG | + | chr8_2:62239998-62240017 | None:intergenic | 10.0% |
| !! | TTTATTAAAAGGAAAAATAA+AGG | + | chr8_2:62240692-62240711 | None:intergenic | 10.0% |
| !!! | TCAATTTTGTCATTATAATT+TGG | - | chr8_2:62236859-62236878 | Msa1260320:intron | 15.0% |
| !! | ATGTTGTTAAATAAAAATCA+GGG | + | chr8_2:62237053-62237072 | None:intergenic | 15.0% |
| !!! | ACTTATTATTCTTTGTTTTA+TGG | + | chr8_2:62238162-62238181 | None:intergenic | 15.0% |
| !! | AATAAAACATATTAATCAGA+AGG | + | chr8_2:62238661-62238680 | None:intergenic | 15.0% |
| !!! | TTATTCATTTTATAACTTCT+TGG | - | chr8_2:62238676-62238695 | Msa1260320:intron | 15.0% |
| !!! | TAAAAAGAAAGTTTTAGAAT+TGG | + | chr8_2:62239238-62239257 | None:intergenic | 15.0% |
| !! | ATTCAAAAATCAAATTGAAT+AGG | - | chr8_2:62239771-62239790 | Msa1260320:intron | 15.0% |
| !!! | ACATAATTTAAAACCTAAAA+TGG | + | chr8_2:62239814-62239833 | None:intergenic | 15.0% |
| !! | CTAACATTATAAATAATTGT+TGG | - | chr8_2:62240811-62240830 | Msa1260320:intron | 15.0% |
| !! | TTAATTAGCAACTATAAATT+AGG | - | chr8_2:62241010-62241029 | Msa1260320:CDS | 15.0% |
| !! | ATTGGAATAATAATTCGTAT+CGG | - | chr8_2:62236767-62236786 | Msa1260320:CDS | 20.0% |
| !!! | AAGATTGAAATTTTCGAATT+TGG | + | chr8_2:62236962-62236981 | None:intergenic | 20.0% |
| !! | GATGTTGTTAAATAAAAATC+AGG | + | chr8_2:62237054-62237073 | None:intergenic | 20.0% |
| !!! | TCATTTTCTTAAATTACAAC+CGG | + | chr8_2:62237131-62237150 | None:intergenic | 20.0% |
| !!! | ATGTTGCTGTTTTTTTATTT+TGG | - | chr8_2:62237358-62237377 | Msa1260320:intron | 20.0% |
| !! | TTACATATAAAGCAAATGTA+GGG | + | chr8_2:62237480-62237499 | None:intergenic | 20.0% |
| !! | ATTTGATAAACCAAAATAAC+AGG | + | chr8_2:62237509-62237528 | None:intergenic | 20.0% |
| !!! | TGTATAATTTGTATTATTGC+AGG | - | chr8_2:62237556-62237575 | Msa1260320:intron | 20.0% |
| !! | TGATCTATTACTATTATCTT+TGG | - | chr8_2:62237583-62237602 | Msa1260320:intron | 20.0% |
| !! | TTCTATCCTCAATAAAAATA+AGG | + | chr8_2:62237628-62237647 | None:intergenic | 20.0% |
| !! | TGTCATTCAACTAAAATATT+AGG | + | chr8_2:62237703-62237722 | None:intergenic | 20.0% |
| !! | ATCAAATTAGTAATTGTTTC+TGG | - | chr8_2:62237779-62237798 | Msa1260320:intron | 20.0% |
| !! | AACAAAATATTACTAAGGTA+AGG | + | chr8_2:62238107-62238126 | None:intergenic | 20.0% |
| !! | CCTAAAACAAAATATTACTA+AGG | + | chr8_2:62238112-62238131 | None:intergenic | 20.0% |
| !!! | CCTTAGTAATATTTTGTTTT+AGG | - | chr8_2:62238109-62238128 | Msa1260320:intron | 20.0% |
| !!! | AGTAATATTTTGTTTTAGGT+TGG | - | chr8_2:62238113-62238132 | Msa1260320:intron | 20.0% |
| !! | ACAAAGAATAATAAGTCATA+TGG | - | chr8_2:62238166-62238185 | Msa1260320:intron | 20.0% |
| !!! | AAAAAATATCTGAAGTTCTT+AGG | - | chr8_2:62238252-62238271 | Msa1260320:intron | 20.0% |
| !!! | ATGTTTTCTCTTTAATTTTC+TGG | - | chr8_2:62238574-62238593 | Msa1260320:intron | 20.0% |
| !!! | TGTTTTCTCTTTAATTTTCT+GGG | - | chr8_2:62238575-62238594 | Msa1260320:intron | 20.0% |
| !! | GAAAAGGAAAAATATGAAAT+AGG | + | chr8_2:62238618-62238637 | None:intergenic | 20.0% |
| !!! | ATTTTTCCTTTTCTTTTTGT+AGG | - | chr8_2:62238625-62238644 | Msa1260320:intron | 20.0% |
| !! | AAAGTTAATATTTACACTCT+TGG | - | chr8_2:62239437-62239456 | Msa1260320:intron | 20.0% |
| !! | AATTGTGTAAATAAGTTTCA+TGG | - | chr8_2:62239850-62239869 | Msa1260320:intron | 20.0% |
| !! | ATACAGAAATTTCATAACAA+TGG | + | chr8_2:62240563-62240582 | None:intergenic | 20.0% |
| !!! | AAAAACAAAGCATTAACATT+TGG | - | chr8_2:62240788-62240807 | Msa1260320:intron | 20.0% |
| !! | TATAAATTAGGTGAAGTTAT+TGG | - | chr8_2:62241022-62241041 | Msa1260320:CDS | 20.0% |
| !! | ATAAATTAGGTGAAGTTATT+GGG | - | chr8_2:62241023-62241042 | Msa1260320:CDS | 20.0% |
| !! | AAAAGAATTGAAATAGAGTA+GGG | + | chr8_2:62241172-62241191 | None:intergenic | 20.0% |
| !! | AGCAATTTCCTTAAATAAAA+TGG | + | chr8_2:62241200-62241219 | None:intergenic | 20.0% |
| ! | TCAGATTGTAAACAAATGAA+CGG | + | chr8_2:62236827-62236846 | None:intergenic | 25.0% |
| !! | ATTTAGTTTAGGGTTTATGA+GGG | - | chr8_2:62236888-62236907 | Msa1260320:intron | 25.0% |
| !!! | ATATAATTTGTCCTTTTTGC+AGG | - | chr8_2:62237277-62237296 | Msa1260320:intron | 25.0% |
| ! | GTTACATATAAAGCAAATGT+AGG | + | chr8_2:62237481-62237500 | None:intergenic | 25.0% |
| ! | TGGTTTATCAAATGTTTCTT+AGG | - | chr8_2:62237516-62237535 | Msa1260320:CDS | 25.0% |
| !!! | CTCTTACCTTATTTTTATTG+AGG | - | chr8_2:62237619-62237638 | Msa1260320:intron | 25.0% |
| ! | TCTTTAGACAATATTAAGAG+TGG | - | chr8_2:62237921-62237940 | Msa1260320:intron | 25.0% |
| ! | ATATTACTAAGGTAAGGAAA+AGG | + | chr8_2:62238101-62238120 | None:intergenic | 25.0% |
| ! | AGTCATATGGTTATGAAATT+TGG | - | chr8_2:62238179-62238198 | Msa1260320:intron | 25.0% |
| ! | TCTCTTGAAAATTGTTTGTT+TGG | - | chr8_2:62238338-62238357 | Msa1260320:intron | 25.0% |
| ! | AATCTAAAGACAAAAGTGAT+TGG | + | chr8_2:62238493-62238512 | None:intergenic | 25.0% |
| ! | CATAAACCTACAAAAAGAAA+AGG | + | chr8_2:62238634-62238653 | None:intergenic | 25.0% |
| ! | AAGTACTATCTACTAATTGT+TGG | - | chr8_2:62238768-62238787 | Msa1260320:intron | 25.0% |
| ! | AGTACTATCTACTAATTGTT+GGG | - | chr8_2:62238769-62238788 | Msa1260320:intron | 25.0% |
| ! | ATCAGTAATATGAGAATTGA+GGG | + | chr8_2:62238844-62238863 | None:intergenic | 25.0% |
| ! | TATCAGTAATATGAGAATTG+AGG | + | chr8_2:62238845-62238864 | None:intergenic | 25.0% |
| !!! | CATTTATTTGCCTTACTTTT+TGG | - | chr8_2:62238909-62238928 | Msa1260320:intron | 25.0% |
| ! | TGCAGAGAAAAACAAATAAA+TGG | + | chr8_2:62239008-62239027 | None:intergenic | 25.0% |
| ! | TTAAAGGTTAATGAAGCTAA+TGG | + | chr8_2:62239045-62239064 | None:intergenic | 25.0% |
| ! | ATCAGATTGCAAGTAAATTT+GGG | - | chr8_2:62239085-62239104 | Msa1260320:intron | 25.0% |
| ! | TATGTAATTACTGATGTTCT+TGG | - | chr8_2:62239658-62239677 | Msa1260320:CDS | 25.0% |
| ! | AACCTAAAATGGAATTTATG+AGG | + | chr8_2:62239803-62239822 | None:intergenic | 25.0% |
| ! | TTTAAATTATGTTTCCTCTG+TGG | - | chr8_2:62239822-62239841 | Msa1260320:intron | 25.0% |
| !!! | TTGTTAGTCTTCTTATAGTT+AGG | - | chr8_2:62239936-62239955 | Msa1260320:intron | 25.0% |
| ! | AAAAACTGAAATTTGCAAGT+TGG | - | chr8_2:62240236-62240255 | Msa1260320:CDS | 25.0% |
| !! | ATTTTATTACACAGCAGAAA+AGG | + | chr8_2:62240274-62240293 | None:intergenic | 25.0% |
| ! | TCTGCTGTGTAATAAAATTA+TGG | - | chr8_2:62240276-62240295 | Msa1260320:CDS | 25.0% |
| ! | AATAAAATTATGGCGAATCA+AGG | - | chr8_2:62240286-62240305 | Msa1260320:CDS | 25.0% |
| ! | ATAAAATTATGGCGAATCAA+GGG | - | chr8_2:62240287-62240306 | Msa1260320:CDS | 25.0% |
| ! | ATGGAAAATGCTATGAAAAA+AGG | + | chr8_2:62240401-62240420 | None:intergenic | 25.0% |
| ! | CTCGAAATTTGTAGAAATTA+TGG | + | chr8_2:62240493-62240512 | None:intergenic | 25.0% |
| !!! | TTAATGCTTTGTTTTTGAGA+AGG | + | chr8_2:62240784-62240803 | None:intergenic | 25.0% |
| !!! | ATTGTTGGTTTTCAAATTGT+AGG | - | chr8_2:62240826-62240845 | Msa1260320:intron | 25.0% |
| !!! | TTGTTGGTTTTCAAATTGTA+GGG | - | chr8_2:62240827-62240846 | Msa1260320:intron | 25.0% |
| !!! | AGAGTAAAAAACTTGTTTTG+CGG | + | chr8_2:62240957-62240976 | None:intergenic | 25.0% |
| ! | TCTGTCAAAAAGAAGTTATT+AGG | - | chr8_2:62241072-62241091 | Msa1260320:CDS | 25.0% |
| ! | CAAAAGAATTGAAATAGAGT+AGG | + | chr8_2:62241173-62241192 | None:intergenic | 25.0% |
| !!! | TTTGCATGCCATTTTATTTA+AGG | - | chr8_2:62241189-62241208 | Msa1260320:exon | 25.0% |
| AAAAAATGCAGAGCTTAGTT+CGG | - | chr8_2:62236443-62236462 | Msa1260320:three_prime_UTR | 30.0% | |
| ! | TCTTCGAAAGATCATTGATT+GGG | + | chr8_2:62236668-62236687 | None:intergenic | 30.0% |
| TTCTTCGAAAGATCATTGAT+TGG | + | chr8_2:62236669-62236688 | None:intergenic | 30.0% | |
| GACAGAACTACATTTCAAAT+TGG | - | chr8_2:62236749-62236768 | Msa1260320:CDS | 30.0% | |
| AATAATAATTCGTATCGGAG+TGG | - | chr8_2:62236772-62236791 | Msa1260320:CDS | 30.0% | |
| CAGATTGTAAACAAATGAAC+GGG | + | chr8_2:62236826-62236845 | None:intergenic | 30.0% | |
| ! | TTTGGACTGAGATTTAGTTT+AGG | - | chr8_2:62236877-62236896 | Msa1260320:intron | 30.0% |
| ! | TTGGACTGAGATTTAGTTTA+GGG | - | chr8_2:62236878-62236897 | Msa1260320:intron | 30.0% |
| ! | GATTTAGTTTAGGGTTTATG+AGG | - | chr8_2:62236887-62236906 | Msa1260320:intron | 30.0% |
| ! | TTCATCTGTTATTTAACACC+TGG | - | chr8_2:62236930-62236949 | Msa1260320:intron | 30.0% |
| TTTCGAATTTGGTAAAATCC+AGG | + | chr8_2:62236951-62236970 | None:intergenic | 30.0% | |
| ! | TTAGGCTTTTACGTGTTATA+TGG | - | chr8_2:62237244-62237263 | Msa1260320:intron | 30.0% |
| ! | TAGGCTTTTACGTGTTATAT+GGG | - | chr8_2:62237245-62237264 | Msa1260320:intron | 30.0% |
| GATAAACCAAAATAACAGGT+GGG | + | chr8_2:62237505-62237524 | None:intergenic | 30.0% | |
| TGATAAACCAAAATAACAGG+TGG | + | chr8_2:62237506-62237525 | None:intergenic | 30.0% | |
| ACTAAAATATTAGGATGCTC+TGG | + | chr8_2:62237694-62237713 | None:intergenic | 30.0% | |
| GGTAATCTAGATAGATTATC+AGG | - | chr8_2:62238273-62238292 | Msa1260320:intron | 30.0% | |
| AAATCATCTGACAAATGAAG+CGG | + | chr8_2:62238392-62238411 | None:intergenic | 30.0% | |
| AAATCTAACACCTAGTAACA+AGG | + | chr8_2:62238705-62238724 | None:intergenic | 30.0% | |
| TGTTACTAGGTGTTAGATTT+AGG | - | chr8_2:62238705-62238724 | Msa1260320:intron | 30.0% | |
| AACTCAAATTCCACATGTAA+GGG | + | chr8_2:62238740-62238759 | None:intergenic | 30.0% | |
| AAACTCAAATTCCACATGTA+AGG | + | chr8_2:62238741-62238760 | None:intergenic | 30.0% | |
| TCAGTAATATGAGAATTGAG+GGG | + | chr8_2:62238843-62238862 | None:intergenic | 30.0% | |
| AAGCTAATGGTACAAATAAC+TGG | + | chr8_2:62239032-62239051 | None:intergenic | 30.0% | |
| AACCTTTAACTCTTTCCAAT+TGG | - | chr8_2:62239056-62239075 | Msa1260320:intron | 30.0% | |
| ACCTTTAACTCTTTCCAATT+GGG | - | chr8_2:62239057-62239076 | Msa1260320:intron | 30.0% | |
| GATCAGATTGCAAGTAAATT+TGG | - | chr8_2:62239084-62239103 | Msa1260320:intron | 30.0% | |
| !!! | AAGTTTTAGAATTGGCAGAA+AGG | + | chr8_2:62239230-62239249 | None:intergenic | 30.0% |
| AAAAATTCTGGGTGAAACAA+AGG | - | chr8_2:62239260-62239279 | Msa1260320:intron | 30.0% | |
| !!! | GACAATTTTTTTCTAGCATC+TGG | + | chr8_2:62239312-62239331 | None:intergenic | 30.0% |
| ATCCATATATCAAAGGTTTG+AGG | + | chr8_2:62239360-62239379 | None:intergenic | 30.0% | |
| TCGAGAAATCCATATATCAA+AGG | + | chr8_2:62239367-62239386 | None:intergenic | 30.0% | |
| ! | TTTATGAGCAATGTGTTTTG+AGG | - | chr8_2:62239700-62239719 | Msa1260320:CDS | 30.0% |
| !! | TTATGAGCAATGTGTTTTGA+GGG | - | chr8_2:62239701-62239720 | Msa1260320:CDS | 30.0% |
| TTTGAATAGAAGAGTCTTCA+AGG | + | chr8_2:62239758-62239777 | None:intergenic | 30.0% | |
| ! | TGCCTCATAAATTCCATTTT+AGG | - | chr8_2:62239798-62239817 | Msa1260320:intron | 30.0% |
| ATATTGACATTTCTGCGATT+TGG | + | chr8_2:62239916-62239935 | None:intergenic | 30.0% | |
| ACATGAACTTTCCAATGATT+AGG | - | chr8_2:62240080-62240099 | Msa1260320:intron | 30.0% | |
| CATGAACTTTCCAATGATTA+GGG | - | chr8_2:62240081-62240100 | Msa1260320:intron | 30.0% | |
| TTCAAGTATATAGTTGCTCT+TGG | + | chr8_2:62240156-62240175 | None:intergenic | 30.0% | |
| TAAAATTATGGCGAATCAAG+GGG | - | chr8_2:62240288-62240307 | Msa1260320:CDS | 30.0% | |
| ACAAGAATACAAGATTGACA+GGG | + | chr8_2:62240363-62240382 | None:intergenic | 30.0% | |
| TACAAGAATACAAGATTGAC+AGG | + | chr8_2:62240364-62240383 | None:intergenic | 30.0% | |
| TCAAATTGATGCAATCTAGT+AGG | - | chr8_2:62240532-62240551 | Msa1260320:intron | 30.0% | |
| AAAAAAAACAGCTACTTACC+AGG | - | chr8_2:62240720-62240739 | Msa1260320:intron | 30.0% | |
| AAAAAAACAGCTACTTACCA+GGG | - | chr8_2:62240721-62240740 | Msa1260320:intron | 30.0% | |
| TGTCGATGAAAATGAACTCT+GGG | + | chr8_2:62236733-62236752 | None:intergenic | 35.0% | |
| AGTAATCACATGTGTAGTGT+CGG | - | chr8_2:62237176-62237195 | Msa1260320:intron | 35.0% | |
| AGATGAAGTTAAATACGCAC+AGG | + | chr8_2:62237866-62237885 | None:intergenic | 35.0% | |
| ATCTACATGACTGAATGCAT+TGG | + | chr8_2:62237967-62237986 | None:intergenic | 35.0% | |
| CATTTAATGTCCAACATGCT+TGG | - | chr8_2:62237993-62238012 | Msa1260320:intron | 35.0% | |
| AGATAGATTATCAGGCATTC+AGG | - | chr8_2:62238281-62238300 | Msa1260320:intron | 35.0% | |
| ! | AATTTTCTGGGTCATATGAC+TGG | - | chr8_2:62238587-62238606 | Msa1260320:intron | 35.0% |
| ! | ATTTTCTGGGTCATATGACT+GGG | - | chr8_2:62238588-62238607 | Msa1260320:intron | 35.0% |
| TTCTTGGTATCCTTGTTACT+AGG | - | chr8_2:62238692-62238711 | Msa1260320:intron | 35.0% | |
| ACTCAAATTCCACATGTAAG+GGG | + | chr8_2:62238739-62238758 | None:intergenic | 35.0% | |
| TAATATGAGAATTGAGGGGA+TGG | + | chr8_2:62238839-62238858 | None:intergenic | 35.0% | |
| ACTGTGTGTACCAAAAAGTA+AGG | + | chr8_2:62238922-62238941 | None:intergenic | 35.0% | |
| TATAGCTTCAGCAGAAATTC+AGG | + | chr8_2:62239111-62239130 | None:intergenic | 35.0% | |
| !! | GTGGTTCTGTTTTCTATCTT+GGG | - | chr8_2:62239148-62239167 | Msa1260320:intron | 35.0% |
| CTTTGATGTTAGAGACTTGT+AGG | + | chr8_2:62239181-62239200 | None:intergenic | 35.0% | |
| CTACAAGTCTCTAACATCAA+AGG | - | chr8_2:62239179-62239198 | Msa1260320:intron | 35.0% | |
| AGTGTCTTTCTAATCATCAC+TGG | + | chr8_2:62239206-62239225 | None:intergenic | 35.0% | |
| !!! | TTTTTTCTAGCATCTGGTGA+AGG | + | chr8_2:62239306-62239325 | None:intergenic | 35.0% |
| AGCCTCAAACCTTTGATATA+TGG | - | chr8_2:62239355-62239374 | Msa1260320:intron | 35.0% | |
| TAAATAAGTTTCATGGCCTG+TGG | - | chr8_2:62239857-62239876 | Msa1260320:intron | 35.0% | |
| AAATAAGTTTCATGGCCTGT+GGG | - | chr8_2:62239858-62239877 | Msa1260320:intron | 35.0% | |
| ATATAGTTGCTCTTGGATTG+AGG | + | chr8_2:62240149-62240168 | None:intergenic | 35.0% | |
| !!! | CTTTTTTATACCAGTTCCTG+CGG | - | chr8_2:62240176-62240195 | Msa1260320:intron | 35.0% |
| ! | TCAGTTTTTGACCTATCAGA+AGG | + | chr8_2:62240225-62240244 | None:intergenic | 35.0% |
| ! | ATCAAGGGGATCTTTTTGAT+CGG | - | chr8_2:62240302-62240321 | Msa1260320:CDS | 35.0% |
| AGATATGCTGAGGATAATAG+AGG | - | chr8_2:62240328-62240347 | Msa1260320:intron | 35.0% | |
| ! | TGAGGATAATAGAGGTATGA+TGG | - | chr8_2:62240336-62240355 | Msa1260320:intron | 35.0% |
| AGTAGTTATGACTACGAGTT+TGG | + | chr8_2:62240455-62240474 | None:intergenic | 35.0% | |
| TCTGTTTCACCATCTTTCTA+CGG | + | chr8_2:62240626-62240645 | None:intergenic | 35.0% | |
| TAGAAAGATGGTGAAACAGA+CGG | - | chr8_2:62240626-62240645 | Msa1260320:intron | 35.0% | |
| !! | TAATGGTTTTCGTTTTTCCC+TGG | + | chr8_2:62240741-62240760 | None:intergenic | 35.0% |
| GTGCTGCGAAAGAAAAATAA+TGG | + | chr8_2:62240758-62240777 | None:intergenic | 35.0% | |
| ATATCAGGATCTGCACATTT+GGG | - | chr8_2:62240860-62240879 | Msa1260320:CDS | 35.0% | |
| !!! | GTAAAAAACTTGTTTTGCGG+AGG | + | chr8_2:62240954-62240973 | None:intergenic | 35.0% |
| ATGTGGTGGTTTAGATTGGA+GGG | + | chr8_2:62236580-62236599 | None:intergenic | 40.0% | |
| AATGTGGTGGTTTAGATTGG+AGG | + | chr8_2:62236581-62236600 | None:intergenic | 40.0% | |
| AGGAATGTGGTGGTTTAGAT+TGG | + | chr8_2:62236584-62236603 | None:intergenic | 40.0% | |
| !! | GGAACGAATTTTGGTGGAAA+GGG | + | chr8_2:62236638-62236657 | None:intergenic | 40.0% |
| !! | AGGAACGAATTTTGGTGGAA+AGG | + | chr8_2:62236639-62236658 | None:intergenic | 40.0% |
| ! | GAAAGAGGAACGAATTTTGG+TGG | + | chr8_2:62236644-62236663 | None:intergenic | 40.0% |
| ! | GGAGAAAGAGGAACGAATTT+TGG | + | chr8_2:62236647-62236666 | None:intergenic | 40.0% |
| ! | GATCATTGATTGGGAGAAAG+AGG | + | chr8_2:62236659-62236678 | None:intergenic | 40.0% |
| ! | GCTACGATCAATGATGCTTT+TGG | + | chr8_2:62236707-62236726 | None:intergenic | 40.0% |
| CTGTCGATGAAAATGAACTC+TGG | + | chr8_2:62236734-62236753 | None:intergenic | 40.0% | |
| ATAATTCGTATCGGAGTGGT+TGG | - | chr8_2:62236776-62236795 | Msa1260320:intron | 40.0% | |
| AACGGGTATAGAGAATGTGA+CGG | + | chr8_2:62236809-62236828 | None:intergenic | 40.0% | |
| ! | TATCTGTGTTGGTGCTTCAT+AGG | + | chr8_2:62237083-62237102 | None:intergenic | 40.0% |
| ! | ATGAAGCACCAACACAGATA+CGG | - | chr8_2:62237083-62237102 | Msa1260320:intron | 40.0% |
| CACCTAAACCTTCTGATTGA+AGG | + | chr8_2:62237214-62237233 | None:intergenic | 40.0% | |
| ! | TTTAGGTGCTACAGAGGTTT+AGG | - | chr8_2:62237226-62237245 | Msa1260320:intron | 40.0% |
| !! | GTAACACCCACCTGTTATTT+TGG | - | chr8_2:62237496-62237515 | Msa1260320:CDS | 40.0% |
| ATTAGGATGCTCTGGCTATT+TGG | + | chr8_2:62237686-62237705 | None:intergenic | 40.0% | |
| TACACTAATCTACACGCTTC+AGG | + | chr8_2:62237753-62237772 | None:intergenic | 40.0% | |
| TTCTGGATTTGCACTTTACC+AGG | - | chr8_2:62237796-62237815 | Msa1260320:intron | 40.0% | |
| CAATTTCATCCTTCAACACC+TGG | + | chr8_2:62237817-62237836 | None:intergenic | 40.0% | |
| CATGTTGGACATTAAATGCC+AGG | + | chr8_2:62237991-62238010 | None:intergenic | 40.0% | |
| ATGCTTGGACTCTACTTCTT+TGG | - | chr8_2:62238008-62238027 | Msa1260320:intron | 40.0% | |
| ACTTCTTTGGATTGAGTGTG+CGG | - | chr8_2:62238021-62238040 | Msa1260320:intron | 40.0% | |
| ! | GCATTCAGGCTTGTTTGTTT+AGG | - | chr8_2:62238295-62238314 | Msa1260320:intron | 40.0% |
| ! | TTCAGGCTTGTTTGTTTAGG+TGG | - | chr8_2:62238298-62238317 | Msa1260320:intron | 40.0% |
| !! | ACGCAGCAAGCTTTTAGTTA+TGG | - | chr8_2:62238454-62238473 | Msa1260320:CDS | 40.0% |
| CTCAAATTCCACATGTAAGG+GGG | + | chr8_2:62238738-62238757 | None:intergenic | 40.0% | |
| GCCCAATTGGAAAGAGTTAA+AGG | + | chr8_2:62239061-62239080 | None:intergenic | 40.0% | |
| CAATCTGATCAAAGCCCAAT+TGG | + | chr8_2:62239074-62239093 | None:intergenic | 40.0% | |
| !! | GGTGGTTCTGTTTTCTATCT+TGG | - | chr8_2:62239147-62239166 | Msa1260320:intron | 40.0% |
| ! | TCTGCATCTTGTTTGCAACA+GGG | - | chr8_2:62239538-62239557 | Msa1260320:intron | 40.0% |
| GGCTTCAAAGGATTTAGCAT+TGG | - | chr8_2:62239576-62239595 | Msa1260320:intron | 40.0% | |
| TACACAATTGTGTTCCACAG+AGG | + | chr8_2:62239839-62239858 | None:intergenic | 40.0% | |
| AATAGTTGATTGACACCCAC+AGG | + | chr8_2:62239876-62239895 | None:intergenic | 40.0% | |
| GCTGTTATCTACCTTCTGAT+AGG | - | chr8_2:62240211-62240230 | Msa1260320:intron | 40.0% | |
| TGATCGGAAAAGATATGCTG+AGG | - | chr8_2:62240318-62240337 | Msa1260320:CDS | 40.0% | |
| GACAACTAAGCTACTTGAGA+TGG | + | chr8_2:62240420-62240439 | None:intergenic | 40.0% | |
| CTGTTTCACCATCTTTCTAC+GGG | + | chr8_2:62240625-62240644 | None:intergenic | 40.0% | |
| !! | TGAAACAGACGGCTTTGTTT+AGG | - | chr8_2:62240637-62240656 | Msa1260320:intron | 40.0% |
| GATATCAGGATCTGCACATT+TGG | - | chr8_2:62240859-62240878 | Msa1260320:CDS | 40.0% | |
| TATGAACTTACTAGTGCTCG+CGG | - | chr8_2:62241126-62241145 | Msa1260320:CDS | 40.0% | |
| AAATGCAGAGCTTAGTTCGG+CGG | - | chr8_2:62236446-62236465 | Msa1260320:three_prime_UTR | 45.0% | |
| AAGAAGGTGAAGGAATGTGG+TGG | + | chr8_2:62236594-62236613 | None:intergenic | 45.0% | |
| TGTCAAGTCCGTATCTGTGT+TGG | + | chr8_2:62237094-62237113 | None:intergenic | 45.0% | |
| TGACACTCACATGTTGACAC+CGG | - | chr8_2:62237109-62237128 | Msa1260320:intron | 45.0% | |
| CGCCTTCAATCAGAAGGTTT+AGG | - | chr8_2:62237209-62237228 | Msa1260320:intron | 45.0% | |
| ! | AGAAGGTTTAGGTGCTACAG+AGG | - | chr8_2:62237220-62237239 | Msa1260320:intron | 45.0% |
| ! | GTCCTTTTTGCAGGAGATTG+TGG | - | chr8_2:62237286-62237305 | Msa1260320:intron | 45.0% |
| AGCCACAATCTCCTGCAAAA+AGG | + | chr8_2:62237291-62237310 | None:intergenic | 45.0% | |
| AATGACACTGTGAGACGTTC+CGG | - | chr8_2:62237716-62237735 | Msa1260320:intron | 45.0% | |
| ACACGCTTCAGGCATGAATT+AGG | + | chr8_2:62237742-62237761 | None:intergenic | 45.0% | |
| !! | TGCACTTTACCAGGTGTTGA+AGG | - | chr8_2:62237805-62237824 | Msa1260320:intron | 45.0% |
| CATTCAGTCATGTAGATGCC+TGG | - | chr8_2:62237970-62237989 | Msa1260320:intron | 45.0% | |
| GAAGTAGAGTCCAAGCATGT+TGG | + | chr8_2:62238006-62238025 | None:intergenic | 45.0% | |
| !! | AAAGCTTGCTGCGTGATTAC+TGG | + | chr8_2:62238448-62238467 | None:intergenic | 45.0% |
| GAAGAAAACCCCCTTACATG+TGG | - | chr8_2:62238727-62238746 | Msa1260320:intron | 45.0% | |
| CTGCTGAAGCTATATCTTGC+TGG | - | chr8_2:62239117-62239136 | Msa1260320:intron | 45.0% | |
| CTATATCTTGCTGGCGCAAT+TGG | - | chr8_2:62239126-62239145 | Msa1260320:intron | 45.0% | |
| ! | CTCTGCATCTTGTTTGCAAC+AGG | - | chr8_2:62239537-62239556 | Msa1260320:intron | 45.0% |
| ! | TCTTGTTTGCAACAGGGCTA+TGG | - | chr8_2:62239544-62239563 | Msa1260320:intron | 45.0% |
| ATTACCAGCTTCCGTTCTTC+AGG | - | chr8_2:62239620-62239639 | Msa1260320:CDS | 45.0% | |
| TTACCAGCTTCCGTTCTTCA+GGG | - | chr8_2:62239621-62239640 | Msa1260320:CDS | 45.0% | |
| !!! | GAGCAATGTGTTTTGAGGGA+AGG | - | chr8_2:62239705-62239724 | Msa1260320:intron | 45.0% |
| TCCAATGATTAGGGAGCAAG+TGG | - | chr8_2:62240090-62240109 | Msa1260320:intron | 45.0% | |
| TCCACTTGCTCCCTAATCAT+TGG | + | chr8_2:62240094-62240113 | None:intergenic | 45.0% | |
| AGTAGCTTAGTTGTCCGAGA+AGG | - | chr8_2:62240425-62240444 | Msa1260320:intron | 45.0% | |
| ! | ACGAGTTTGGTGATCCTTCT+CGG | + | chr8_2:62240442-62240461 | None:intergenic | 45.0% |
| ! | GCTTTAAGCCCGTAGAAAGA+TGG | - | chr8_2:62240614-62240633 | Msa1260320:intron | 45.0% |
| CCATAGCATGGTCAAGAGTT+CGG | - | chr8_2:62240900-62240919 | Msa1260320:CDS | 45.0% | |
| ! | GTTTTGCGGAGGTCTGAAAA+AGG | + | chr8_2:62240943-62240962 | None:intergenic | 45.0% |
| !!! | AAAAAAAAAATTGATAATAA+GGG | + | chr8_2:62239997-62240016 | None:intergenic | 5.0% |
| !! | TGAAGGTGAGGTTGGGTTGA+AGG | + | chr8_2:62236510-62236529 | None:intergenic | 50.0% |
| TGAGGGTTGAAGGTGAGGTT+GGG | + | chr8_2:62236517-62236536 | None:intergenic | 50.0% | |
| AAGGACGAGTGTGGGAGATA+CGG | + | chr8_2:62236540-62236559 | None:intergenic | 50.0% | |
| ! | GTGAGTTGAAGGACGAGTGT+GGG | + | chr8_2:62236548-62236567 | None:intergenic | 50.0% |
| ! | TGTGAGTTGAAGGACGAGTG+TGG | + | chr8_2:62236549-62236568 | None:intergenic | 50.0% |
| ! | GGTTGGACGATGTGAGTTGA+AGG | + | chr8_2:62236559-62236578 | None:intergenic | 50.0% |
| GGTGGTTTAGATTGGAGGGT+TGG | + | chr8_2:62236576-62236595 | None:intergenic | 50.0% | |
| CGGAAGAAGGTGAAGGAATG+TGG | + | chr8_2:62236597-62236616 | None:intergenic | 50.0% | |
| ! | TGAATGGCGGAAGAAGGTGA+AGG | + | chr8_2:62236604-62236623 | None:intergenic | 50.0% |
| ! | CATGAGTGAATGGCGGAAGA+AGG | + | chr8_2:62236610-62236629 | None:intergenic | 50.0% |
| CTTCTTCCGCCATTCACTCA+TGG | - | chr8_2:62236608-62236627 | Msa1260320:three_prime_UTR | 50.0% | |
| AAGGGAACGCCATGAGTGAA+TGG | + | chr8_2:62236620-62236639 | None:intergenic | 50.0% | |
| ! | ACATGTGTAGTGTCGGACAC+CGG | - | chr8_2:62237183-62237202 | Msa1260320:intron | 50.0% |
| ! | CTTCTGATTGAAGGCGTGTC+CGG | + | chr8_2:62237205-62237224 | None:intergenic | 50.0% |
| GCAGGAGATTGTGGCTAAAC+AGG | - | chr8_2:62237295-62237314 | Msa1260320:CDS | 50.0% | |
| ACACCAGATGACGTGGTTCT+GGG | - | chr8_2:62237321-62237340 | Msa1260320:intron | 50.0% | |
| GCTTCAGGCATGAATTAGGC+CGG | + | chr8_2:62237738-62237757 | None:intergenic | 50.0% | |
| AGAATTGAGGGGATGGCTAG+TGG | + | chr8_2:62238832-62238851 | None:intergenic | 50.0% | |
| TATCTTGCTGGCGCAATTGG+TGG | - | chr8_2:62239129-62239148 | Msa1260320:intron | 50.0% | |
| ! | TTCCGTTCTTCAGGGAGTGT+AGG | - | chr8_2:62239629-62239648 | Msa1260320:CDS | 50.0% |
| GTCCTACACTCCCTGAAGAA+CGG | + | chr8_2:62239634-62239653 | None:intergenic | 50.0% | |
| ! | CTGCGATTTGGCGAACTTGA+TGG | + | chr8_2:62239904-62239923 | None:intergenic | 50.0% |
| TAGGGAGACAGTGCGATATC+AGG | - | chr8_2:62240845-62240864 | Msa1260320:CDS | 50.0% | |
| TCAGGATCTGCACATTTGGG+TGG | - | chr8_2:62240863-62240882 | Msa1260320:CDS | 50.0% | |
| TTGCAGTTGCAGCCATAGCA+TGG | - | chr8_2:62240888-62240907 | Msa1260320:CDS | 50.0% | |
| CCGAACTCTTGACCATGCTA+TGG | + | chr8_2:62240903-62240922 | None:intergenic | 50.0% | |
| GCATGGTCAAGAGTTCGGAA+AGG | - | chr8_2:62240905-62240924 | Msa1260320:CDS | 50.0% | |
| ! | CTCGCGGTGTCAATGTAGTT+GGG | - | chr8_2:62241142-62241161 | Msa1260320:CDS | 50.0% |
| GAGCTTAGTTCGGCGGTTCA+CGG | - | chr8_2:62236453-62236472 | Msa1260320:three_prime_UTR | 55.0% | |
| !! | TGAGGTTGGGTTGAAGGTGG+TGG | + | chr8_2:62236504-62236523 | None:intergenic | 55.0% |
| !! | AGGTGAGGTTGGGTTGAAGG+TGG | + | chr8_2:62236507-62236526 | None:intergenic | 55.0% |
| GTGAGGGTTGAAGGTGAGGT+TGG | + | chr8_2:62236518-62236537 | None:intergenic | 55.0% | |
| TACGGTGAGGGTTGAAGGTG+AGG | + | chr8_2:62236522-62236541 | None:intergenic | 55.0% | |
| GGAGATACGGTGAGGGTTGA+AGG | + | chr8_2:62236527-62236546 | None:intergenic | 55.0% | |
| GAGTGTGGGAGATACGGTGA+GGG | + | chr8_2:62236534-62236553 | None:intergenic | 55.0% | |
| GGAACGCCATGAGTGAATGG+CGG | + | chr8_2:62236617-62236636 | None:intergenic | 55.0% | |
| CGGACACGCCTTCAATCAGA+AGG | - | chr8_2:62237203-62237222 | Msa1260320:intron | 55.0% | |
| GACACCAGATGACGTGGTTC+TGG | - | chr8_2:62237320-62237339 | Msa1260320:intron | 55.0% | |
| ! | CACCAGATGACGTGGTTCTG+GGG | - | chr8_2:62237322-62237341 | Msa1260320:intron | 55.0% |
| AACCCCAGAACCACGTCATC+TGG | + | chr8_2:62237327-62237346 | None:intergenic | 55.0% | |
| TGGCGCGATCAAGGCTTCAA+AGG | - | chr8_2:62239564-62239583 | Msa1260320:intron | 55.0% | |
| ACTCCCTGAAGAACGGAAGC+TGG | + | chr8_2:62239627-62239646 | None:intergenic | 55.0% | |
| ! | GCTCGCGGTGTCAATGTAGT+TGG | - | chr8_2:62241141-62241160 | Msa1260320:CDS | 55.0% |
| CTTAGTTCGGCGGTTCACGG+CGG | - | chr8_2:62236456-62236475 | Msa1260320:three_prime_UTR | 60.0% | |
| !! | GGTGGTGGTGGTGGTTGTGA+TGG | + | chr8_2:62236489-62236508 | None:intergenic | 60.0% |
| !! | TGGGTTGAAGGTGGTGGTGG+TGG | + | chr8_2:62236498-62236517 | None:intergenic | 60.0% |
| !! | GGTTGGGTTGAAGGTGGTGG+TGG | + | chr8_2:62236501-62236520 | None:intergenic | 60.0% |
| CGAGTGTGGGAGATACGGTG+AGG | + | chr8_2:62236535-62236554 | None:intergenic | 60.0% | |
| CAGGCTGACACCAGATGACG+TGG | - | chr8_2:62237314-62237333 | Msa1260320:intron | 60.0% | |
| ACAGGGCTATGGCGCGATCA+AGG | - | chr8_2:62239555-62239574 | Msa1260320:intron | 60.0% | |
| ACCAGTTCCTGCGGCGTTGC+TGG | - | chr8_2:62240185-62240204 | Msa1260320:intron | 65.0% | |
| ACCAGCAACGCCGCAGGAAC+TGG | + | chr8_2:62240189-62240208 | None:intergenic | 65.0% | |
| CAGCTTACCAGCAACGCCGC+AGG | + | chr8_2:62240195-62240214 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 62236406 | 62241234 | 62236406 | ID=Msa1260320;Name=Msa1260320 |
| chr8_2 | mRNA | 62236406 | 62241234 | 62236406 | ID=Msa1260320-mRNA-1;Parent=Msa1260320;Name=Msa1260320-mRNA-1;_AED=0.06;_eAED=0.06;_QI=42|1|1|1|0.71|0.87|8|297|325 |
| chr8_2 | exon | 62236406 | 62236792 | 62236406 | ID=Msa1260320-mRNA-1:exon:19728;Parent=Msa1260320-mRNA-1 |
| chr8_2 | exon | 62237291 | 62237332 | 62237291 | ID=Msa1260320-mRNA-1:exon:19727;Parent=Msa1260320-mRNA-1 |
| chr8_2 | exon | 62237434 | 62237538 | 62237434 | ID=Msa1260320-mRNA-1:exon:19726;Parent=Msa1260320-mRNA-1 |
| chr8_2 | exon | 62238043 | 62238081 | 62238043 | ID=Msa1260320-mRNA-1:exon:19725;Parent=Msa1260320-mRNA-1 |
| chr8_2 | exon | 62238440 | 62238550 | 62238440 | ID=Msa1260320-mRNA-1:exon:19724;Parent=Msa1260320-mRNA-1 |
| chr8_2 | exon | 62239603 | 62239722 | 62239603 | ID=Msa1260320-mRNA-1:exon:19723;Parent=Msa1260320-mRNA-1 |
| chr8_2 | exon | 62240221 | 62240341 | 62240221 | ID=Msa1260320-mRNA-1:exon:19722;Parent=Msa1260320-mRNA-1 |
| chr8_2 | exon | 62240843 | 62241234 | 62240843 | ID=Msa1260320-mRNA-1:exon:19721;Parent=Msa1260320-mRNA-1 |
| chr8_2 | five_prime_UTR | 62241193 | 62241234 | 62241193 | ID=Msa1260320-mRNA-1:five_prime_utr;Parent=Msa1260320-mRNA-1 |
| chr8_2 | CDS | 62240843 | 62241192 | 62240843 | ID=Msa1260320-mRNA-1:cds;Parent=Msa1260320-mRNA-1 |
| chr8_2 | CDS | 62240221 | 62240341 | 62240221 | ID=Msa1260320-mRNA-1:cds;Parent=Msa1260320-mRNA-1 |
| chr8_2 | CDS | 62239603 | 62239722 | 62239603 | ID=Msa1260320-mRNA-1:cds;Parent=Msa1260320-mRNA-1 |
| chr8_2 | CDS | 62238440 | 62238550 | 62238440 | ID=Msa1260320-mRNA-1:cds;Parent=Msa1260320-mRNA-1 |
| chr8_2 | CDS | 62238043 | 62238081 | 62238043 | ID=Msa1260320-mRNA-1:cds;Parent=Msa1260320-mRNA-1 |
| chr8_2 | CDS | 62237434 | 62237538 | 62237434 | ID=Msa1260320-mRNA-1:cds;Parent=Msa1260320-mRNA-1 |
| chr8_2 | CDS | 62237291 | 62237332 | 62237291 | ID=Msa1260320-mRNA-1:cds;Parent=Msa1260320-mRNA-1 |
| chr8_2 | CDS | 62236703 | 62236792 | 62236703 | ID=Msa1260320-mRNA-1:cds;Parent=Msa1260320-mRNA-1 |
| chr8_2 | three_prime_UTR | 62236406 | 62236702 | 62236406 | ID=Msa1260320-mRNA-1:three_prime_utr;Parent=Msa1260320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
