Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089940 | XP_003604140.1 | 96.530 | 634 | 12 | 3 | 1 | 628 | 1 | 630 | 0.0 | 1225 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089940 | sp|O04130|SERA2_ARATH | 75.962 | 624 | 137 | 4 | 16 | 628 | 3 | 624 | 0.0 | 957 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089940 | G7JVK0 | 96.530 | 634 | 12 | 3 | 1 | 628 | 1 | 630 | 0.0 | 1225 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010890 | Msa1089940 | 0.999162 | 1.759032e-293 | -8.615850e-47 |
| Msa0012080 | Msa1089940 | 0.804606 | 1.992537e-49 | -8.615850e-47 |
| Msa0017510 | Msa1089940 | 0.804178 | 2.447098e-49 | -8.615850e-47 |
| Msa0029240 | Msa1089940 | 0.804260 | 2.352501e-49 | -8.615850e-47 |
| Msa0034270 | Msa1089940 | 0.822047 | 2.918527e-53 | -8.615850e-47 |
| Msa0047030 | Msa1089940 | 0.804413 | 2.186355e-49 | -8.615850e-47 |
| Msa0054480 | Msa1089940 | 0.843069 | 1.757100e-58 | -8.615850e-47 |
| Msa0061380 | Msa1089940 | 0.805113 | 1.561099e-49 | -8.615850e-47 |
| Msa0063890 | Msa1089940 | 0.826839 | 2.176652e-54 | -8.615850e-47 |
| Msa0070700 | Msa1089940 | 0.817090 | 3.949333e-52 | -8.615850e-47 |
| Msa0100090 | Msa1089940 | 0.803937 | 2.746900e-49 | -8.615850e-47 |
| Msa0101440 | Msa1089940 | 0.828103 | 1.082602e-54 | -8.615850e-47 |
| Msa0105070 | Msa1089940 | 0.802229 | 6.195188e-49 | -8.615850e-47 |
| Msa0108410 | Msa1089940 | 0.808021 | 3.799833e-50 | -8.615850e-47 |
| Msa0116770 | Msa1089940 | 0.810922 | 9.056646e-51 | -8.615850e-47 |
| Msa0613440 | Msa1089940 | 0.807787 | 4.262753e-50 | -8.615850e-47 |
| Msa0622170 | Msa1089940 | -0.806592 | 7.631513e-50 | -8.615850e-47 |
| Msa0625190 | Msa1089940 | 0.954844 | 1.181406e-112 | -8.615850e-47 |
| Msa0625720 | Msa1089940 | 0.826598 | 2.485214e-54 | -8.615850e-47 |
| Msa0626510 | Msa1089940 | 0.805204 | 1.494700e-49 | -8.615850e-47 |
| Msa0629510 | Msa1089940 | 0.806486 | 8.037517e-50 | -8.615850e-47 |
| Msa0633700 | Msa1089940 | 0.831681 | 1.454300e-55 | -8.615850e-47 |
| Msa0640860 | Msa1089940 | 0.801514 | 8.686764e-49 | -8.615850e-47 |
| Msa0643570 | Msa1089940 | 0.803921 | 2.767081e-49 | -8.615850e-47 |
| Msa0648310 | Msa1089940 | 0.807750 | 4.339962e-50 | -8.615850e-47 |
| Msa0648860 | Msa1089940 | 0.808504 | 2.997522e-50 | -8.615850e-47 |
| Msa0661650 | Msa1089940 | 0.865121 | 7.427136e-65 | -8.615850e-47 |
| Msa0663390 | Msa1089940 | 0.807641 | 4.577506e-50 | -8.615850e-47 |
| Msa0666650 | Msa1089940 | 0.836618 | 8.420033e-57 | -8.615850e-47 |
| Msa0685900 | Msa1089940 | 0.803449 | 3.468107e-49 | -8.615850e-47 |
| Msa0693380 | Msa1089940 | 0.803273 | 3.771529e-49 | -8.615850e-47 |
| Msa0708310 | Msa1089940 | 0.811636 | 6.341350e-51 | -8.615850e-47 |
| Msa0725050 | Msa1089940 | 0.802163 | 6.391711e-49 | -8.615850e-47 |
| Msa0731940 | Msa1089940 | 0.800080 | 1.704436e-48 | -8.615850e-47 |
| Msa0779320 | Msa1089940 | 0.812031 | 5.202132e-51 | -8.615850e-47 |
| Msa0793800 | Msa1089940 | 0.809552 | 1.788570e-50 | -8.615850e-47 |
| Msa0817460 | Msa1089940 | 0.802852 | 4.609405e-49 | -8.615850e-47 |
| Msa0831530 | Msa1089940 | 0.808718 | 2.698332e-50 | -8.615850e-47 |
| Msa0127800 | Msa1089940 | 0.801642 | 8.176090e-49 | -8.615850e-47 |
| Msa0128120 | Msa1089940 | 0.800886 | 1.167865e-48 | -8.615850e-47 |
| Msa0136070 | Msa1089940 | 0.809723 | 1.643558e-50 | -8.615850e-47 |
| Msa0139060 | Msa1089940 | 0.801428 | 9.044659e-49 | -8.615850e-47 |
| Msa0144370 | Msa1089940 | 0.804603 | 1.995993e-49 | -8.615850e-47 |
| Msa0152430 | Msa1089940 | 0.811803 | 5.831125e-51 | -8.615850e-47 |
| Msa0157290 | Msa1089940 | 0.804210 | 2.410159e-49 | -8.615850e-47 |
| Msa0165210 | Msa1089940 | 0.807548 | 4.790887e-50 | -8.615850e-47 |
| Msa0165220 | Msa1089940 | 0.802010 | 6.869974e-49 | -8.615850e-47 |
| Msa0168500 | Msa1089940 | 0.811309 | 7.466142e-51 | -8.615850e-47 |
| Msa0171540 | Msa1089940 | 0.802794 | 4.736762e-49 | -8.615850e-47 |
| Msa0173660 | Msa1089940 | 0.807009 | 6.232581e-50 | -8.615850e-47 |
| Msa0187120 | Msa1089940 | 0.823658 | 1.230149e-53 | -8.615850e-47 |
| Msa0197660 | Msa1089940 | 0.835985 | 1.219564e-56 | -8.615850e-47 |
| Msa0212310 | Msa1089940 | 0.803230 | 3.848701e-49 | -8.615850e-47 |
| Msa0225100 | Msa1089940 | 0.812655 | 3.800297e-51 | -8.615850e-47 |
| Msa0225460 | Msa1089940 | 0.811346 | 7.332031e-51 | -8.615850e-47 |
| Msa0225680 | Msa1089940 | 0.818731 | 1.681996e-52 | -8.615850e-47 |
| Msa0365780 | Msa1089940 | 0.820697 | 5.981510e-53 | -8.615850e-47 |
| Msa0367870 | Msa1089940 | 0.827267 | 1.719044e-54 | -8.615850e-47 |
| Msa0372340 | Msa1089940 | 0.808906 | 2.459645e-50 | -8.615850e-47 |
| Msa0386090 | Msa1089940 | 0.841044 | 6.033687e-58 | -8.615850e-47 |
| Msa0391320 | Msa1089940 | 0.819658 | 1.034772e-52 | -8.615850e-47 |
| Msa0395860 | Msa1089940 | 0.811994 | 5.298435e-51 | -8.615850e-47 |
| Msa0397750 | Msa1089940 | 0.807891 | 4.049767e-50 | -8.615850e-47 |
| Msa0403640 | Msa1089940 | 0.815807 | 7.650084e-52 | -8.615850e-47 |
| Msa0404190 | Msa1089940 | 0.825254 | 5.182533e-54 | -8.615850e-47 |
| Msa0416650 | Msa1089940 | 0.813613 | 2.342973e-51 | -8.615850e-47 |
| Msa0428080 | Msa1089940 | 0.840603 | 7.873468e-58 | -8.615850e-47 |
| Msa0440400 | Msa1089940 | 0.817224 | 3.684183e-52 | -8.615850e-47 |
| Msa0458720 | Msa1089940 | 0.803753 | 2.998805e-49 | -8.615850e-47 |
| Msa0465410 | Msa1089940 | 0.850275 | 1.886910e-60 | -8.615850e-47 |
| Msa0467490 | Msa1089940 | 0.802715 | 4.918036e-49 | -8.615850e-47 |
| Msa1003620 | Msa1089940 | 0.806423 | 8.287053e-50 | -8.615850e-47 |
| Msa1014540 | Msa1089940 | 0.804784 | 1.829057e-49 | -8.615850e-47 |
| Msa1017430 | Msa1089940 | 0.804417 | 2.181998e-49 | -8.615850e-47 |
| Msa1018980 | Msa1089940 | 0.800812 | 1.208814e-48 | -8.615850e-47 |
| Msa1019000 | Msa1089940 | 0.828804 | 7.332867e-55 | -8.615850e-47 |
| Msa1019150 | Msa1089940 | 0.839842 | 1.244130e-57 | -8.615850e-47 |
| Msa1037780 | Msa1089940 | 0.847172 | 1.368185e-59 | -8.615850e-47 |
| Msa1039710 | Msa1089940 | -0.802819 | 4.681329e-49 | -8.615850e-47 |
| Msa1046460 | Msa1089940 | 0.805071 | 1.592944e-49 | -8.615850e-47 |
| Msa1047080 | Msa1089940 | 0.804795 | 1.820122e-49 | -8.615850e-47 |
| Msa1054990 | Msa1089940 | 0.822124 | 2.801577e-53 | -8.615850e-47 |
| Msa1066670 | Msa1089940 | 0.817555 | 3.103882e-52 | -8.615850e-47 |
| Msa1075540 | Msa1089940 | 0.808896 | 2.471797e-50 | -8.615850e-47 |
| Msa1075650 | Msa1089940 | 0.800798 | 1.216928e-48 | -8.615850e-47 |
| Msa1082500 | Msa1089940 | 0.804929 | 1.706333e-49 | -8.615850e-47 |
| Msa1083840 | Msa1089940 | 0.814858 | 1.243528e-51 | -8.615850e-47 |
| Msa1084960 | Msa1089940 | 0.809219 | 2.108321e-50 | -8.615850e-47 |
| Msa1089940 | Msa1100050 | 0.827327 | 1.662885e-54 | -8.615850e-47 |
| Msa1089940 | Msa1101710 | 0.804690 | 1.913502e-49 | -8.615850e-47 |
| Msa1089940 | Msa1101720 | 0.804183 | 2.441528e-49 | -8.615850e-47 |
| Msa1089940 | Msa1101760 | 0.801525 | 8.640396e-49 | -8.615850e-47 |
| Msa1089940 | Msa1104090 | 0.824845 | 6.472163e-54 | -8.615850e-47 |
| Msa1089940 | Msa1119940 | 0.801544 | 8.562739e-49 | -8.615850e-47 |
| Msa1089940 | Msa1121490 | 0.812110 | 4.999571e-51 | -8.615850e-47 |
| Msa1089940 | Msa1129550 | 0.827411 | 1.588313e-54 | -8.615850e-47 |
| Msa1089940 | Msa1129730 | 0.826812 | 2.208549e-54 | -8.615850e-47 |
| Msa1089940 | Msa1131050 | 0.847578 | 1.058595e-59 | -8.615850e-47 |
| Msa1089940 | Msa1147740 | 0.845326 | 4.353831e-59 | -8.615850e-47 |
| Msa1089940 | Msa1162780 | 0.811162 | 8.037431e-51 | -8.615850e-47 |
| Msa1089940 | Msa1171710 | 0.835698 | 1.442320e-56 | -8.615850e-47 |
| Msa1089940 | Msa1175180 | 0.816502 | 5.351098e-52 | -8.615850e-47 |
| Msa1089940 | Msa1175440 | 0.803314 | 3.698379e-49 | -8.615850e-47 |
| Msa1089940 | Msa1178180 | 0.813784 | 2.148132e-51 | -8.615850e-47 |
| Msa1089940 | Msa1186950 | -0.834980 | 2.189800e-56 | -8.615850e-47 |
| Msa1089940 | Msa1201200 | 0.806091 | 9.734352e-50 | -8.615850e-47 |
| Msa1089940 | Msa1215050 | 0.801524 | 8.644573e-49 | -8.615850e-47 |
| Msa1089940 | Msa1225700 | 0.825663 | 4.145809e-54 | -8.615850e-47 |
| Msa1089940 | Msa1229500 | 0.804858 | 1.765599e-49 | -8.615850e-47 |
| Msa1089940 | Msa1229600 | 0.819346 | 1.218679e-52 | -8.615850e-47 |
| Msa1089940 | Msa1242670 | 0.801163 | 1.025081e-48 | -8.615850e-47 |
| Msa1089940 | Msa1249490 | 0.811066 | 8.429728e-51 | -8.615850e-47 |
| Msa1089940 | Msa1260320 | 0.807240 | 5.566233e-50 | -8.615850e-47 |
| Msa1089940 | Msa1263750 | 0.800031 | 1.743581e-48 | -8.615850e-47 |
| Msa1089940 | Msa1263790 | 0.813260 | 2.800402e-51 | -8.615850e-47 |
| Msa1089940 | Msa1269480 | 0.814601 | 1.417663e-51 | -8.615850e-47 |
| Msa1089940 | Msa1276530 | 0.839098 | 1.940968e-57 | -8.615850e-47 |
| Msa1089940 | Msa1277150 | 0.816620 | 5.035744e-52 | -8.615850e-47 |
| Msa1089940 | Msa1283860 | 0.804028 | 2.629676e-49 | -8.615850e-47 |
| Msa1089940 | Msa1284680 | 0.811788 | 5.874840e-51 | -8.615850e-47 |
| Msa1089940 | Msa1287440 | 0.812625 | 3.858300e-51 | -8.615850e-47 |
| Msa1089940 | Msa1287460 | 0.813715 | 2.223928e-51 | -8.615850e-47 |
| Msa1089940 | Msa1299960 | 0.806300 | 8.794886e-50 | -8.615850e-47 |
| Msa1089940 | Msa1300970 | 0.807174 | 5.748957e-50 | -8.615850e-47 |
| Msa1089940 | Msa1302830 | 0.800777 | 1.229236e-48 | -8.615850e-47 |
| Msa1089940 | Msa1304890 | -0.814266 | 1.681341e-51 | -8.615850e-47 |
| Msa1089940 | Msa1308620 | 0.813333 | 2.698665e-51 | -8.615850e-47 |
| Msa1089940 | Msa1310210 | 0.810946 | 8.949230e-51 | -8.615850e-47 |
| Msa1089940 | Msa1322890 | 0.802923 | 4.454626e-49 | -8.615850e-47 |
| Msa1089940 | Msa1323710 | 0.801217 | 9.991432e-49 | -8.615850e-47 |
| Msa1089940 | Msa1331000 | 0.807077 | 6.029135e-50 | -8.615850e-47 |
| Msa1089940 | Msa1332000 | 0.809116 | 2.218537e-50 | -8.615850e-47 |
| Msa1089940 | Msa1332070 | 0.826300 | 2.925467e-54 | -8.615850e-47 |
| Msa1089940 | Msa1369550 | 0.816913 | 4.327573e-52 | -8.615850e-47 |
| Msa1089940 | Msa1372760 | 0.805090 | 1.578439e-49 | -8.615850e-47 |
| Msa1089940 | Msa1387870 | 0.823225 | 1.552920e-53 | -8.615850e-47 |
| Msa1089940 | Msa1392240 | 0.845570 | 3.740292e-59 | -8.615850e-47 |
| Msa1089940 | Msa1393410 | 0.814909 | 1.211950e-51 | -8.615850e-47 |
| Msa1089940 | Msa1397740 | 0.802589 | 5.223153e-49 | -8.615850e-47 |
| Msa1089940 | Msa1412540 | 0.816391 | 5.665455e-52 | -8.615850e-47 |
| Msa1089940 | Msa1414520 | 0.995718 | 3.776882e-219 | -8.615850e-47 |
| Msa1089940 | Msa1419370 | 0.825771 | 3.907675e-54 | -8.615850e-47 |
| Msa1089940 | Msa1419960 | 0.807323 | 5.347136e-50 | -8.615850e-47 |
| Msa1089940 | Msa1422420 | 0.816074 | 6.669099e-52 | -8.615850e-47 |
| Msa1089940 | Msa1424750 | 0.810011 | 1.425155e-50 | -8.615850e-47 |
| Msa1089940 | Msa1425090 | 0.849879 | 2.435938e-60 | -8.615850e-47 |
| Msa1089940 | Msa1435160 | 0.992381 | 5.965326e-193 | -8.615850e-47 |
| Msa1089940 | Msa1435420 | 0.814969 | 1.175326e-51 | -8.615850e-47 |
| Msa1089940 | Msa1440560 | 0.863494 | 2.391777e-64 | -8.615850e-47 |
| Msa1089940 | Msa1446950 | 0.823838 | 1.116739e-53 | -8.615850e-47 |
| Msa1089940 | Msa1453320 | 0.842084 | 3.209122e-58 | -8.615850e-47 |
| Msa1089940 | Msa1453360 | 0.802198 | 6.285813e-49 | -8.615850e-47 |
| Msa1089940 | Msa1459100 | 0.846743 | 1.793384e-59 | -8.615850e-47 |
| Msa0239800 | Msa1089940 | 0.829516 | 4.926830e-55 | -8.615850e-47 |
| Msa0261340 | Msa1089940 | 0.808169 | 3.534556e-50 | -8.615850e-47 |
| Msa0264830 | Msa1089940 | 0.801859 | 7.381361e-49 | -8.615850e-47 |
| Msa0266180 | Msa1089940 | 0.812831 | 3.477277e-51 | -8.615850e-47 |
| Msa0267370 | Msa1089940 | 0.806603 | 7.591910e-50 | -8.615850e-47 |
| Msa0269810 | Msa1089940 | 0.814962 | 1.179489e-51 | -8.615850e-47 |
| Msa0272660 | Msa1089940 | 0.807024 | 6.185452e-50 | -8.615850e-47 |
| Msa0277820 | Msa1089940 | 0.813121 | 3.004031e-51 | -8.615850e-47 |
| Msa0279700 | Msa1089940 | 0.838052 | 3.616650e-57 | -8.615850e-47 |
| Msa0283910 | Msa1089940 | 0.809450 | 1.881144e-50 | -8.615850e-47 |
| Msa0287740 | Msa1089940 | 0.816783 | 4.627819e-52 | -8.615850e-47 |
| Msa0290720 | Msa1089940 | 0.803326 | 3.677338e-49 | -8.615850e-47 |
| Msa0292030 | Msa1089940 | 0.804946 | 1.691950e-49 | -8.615850e-47 |
| Msa0317510 | Msa1089940 | 0.830623 | 2.646156e-55 | -8.615850e-47 |
| Msa0330340 | Msa1089940 | 0.803532 | 3.333194e-49 | -8.615850e-47 |
| Msa0337620 | Msa1089940 | 0.808553 | 2.927287e-50 | -8.615850e-47 |
| Msa0340340 | Msa1089940 | 0.800931 | 1.143224e-48 | -8.615850e-47 |
| Msa0340450 | Msa1089940 | 0.800374 | 1.485251e-48 | -8.615850e-47 |
| Msa0490730 | Msa1089940 | -0.803164 | 3.972245e-49 | -8.615850e-47 |
| Msa0511270 | Msa1089940 | 0.848121 | 7.498726e-60 | -8.615850e-47 |
| Msa0511370 | Msa1089940 | 0.817033 | 4.066500e-52 | -8.615850e-47 |
| Msa0512750 | Msa1089940 | 0.811484 | 6.842923e-51 | -8.615850e-47 |
| Msa0520950 | Msa1089940 | 0.801231 | 9.924659e-49 | -8.615850e-47 |
| Msa0526070 | Msa1089940 | -0.806505 | 7.963078e-50 | -8.615850e-47 |
| Msa0529890 | Msa1089940 | 0.826417 | 2.743462e-54 | -8.615850e-47 |
| Msa0545210 | Msa1089940 | 0.812686 | 3.742572e-51 | -8.615850e-47 |
| Msa0554050 | Msa1089940 | 0.800359 | 1.495903e-48 | -8.615850e-47 |
| Msa0585560 | Msa1089940 | 0.822700 | 2.059255e-53 | -8.615850e-47 |
| Msa0588870 | Msa1089940 | 0.829604 | 4.689658e-55 | -8.615850e-47 |
| Msa0589280 | Msa1089940 | 0.814806 | 1.277271e-51 | -8.615850e-47 |
| Msa0600700 | Msa1089940 | 0.804022 | 2.636822e-49 | -8.615850e-47 |
| Msa0602690 | Msa1089940 | 0.815806 | 7.652913e-52 | -8.615850e-47 |
| Msa0842650 | Msa1089940 | 0.809914 | 1.494993e-50 | -8.615850e-47 |
| Msa0880140 | Msa1089940 | 0.800250 | 1.574120e-48 | -8.615850e-47 |
| Msa0915770 | Msa1089940 | 0.822991 | 1.761766e-53 | -8.615850e-47 |
| Msa0915800 | Msa1089940 | 0.818612 | 1.789922e-52 | -8.615850e-47 |
| Msa0915830 | Msa1089940 | 0.815611 | 8.461314e-52 | -8.615850e-47 |
| Msa0926890 | Msa1089940 | 0.800050 | 1.728816e-48 | -8.615850e-47 |
| Msa0936060 | Msa1089940 | 0.815822 | 7.591297e-52 | -8.615850e-47 |
| Msa0938480 | Msa1089940 | 0.829720 | 4.396216e-55 | -8.615850e-47 |
| Msa0939250 | Msa1089940 | 0.807654 | 4.547875e-50 | -8.615850e-47 |
| Msa0945110 | Msa1089940 | 0.800726 | 1.258683e-48 | -8.615850e-47 |
| Msa0965610 | Msa1089940 | 0.803735 | 3.025406e-49 | -8.615850e-47 |
| Msa0967870 | Msa1089940 | 0.810971 | 8.839363e-51 | -8.615850e-47 |
| Msa0972960 | Msa1089940 | 0.807677 | 4.496947e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089940 | MtrunA17_Chr4g0000511 | 96.530 | 634 | 12 | 3 | 1 | 628 | 1 | 630 | 0.0 | 1225 |
| Msa1089940 | MtrunA17_Chr1g0208141 | 77.939 | 553 | 122 | 0 | 76 | 628 | 45 | 597 | 0.0 | 902 |
| Msa1089940 | MtrunA17_Chr1g0210971 | 34.564 | 298 | 172 | 7 | 115 | 390 | 50 | 346 | 1.96e-32 | 129 |
| Msa1089940 | MtrunA17_Chr3g0077771 | 31.890 | 254 | 153 | 5 | 149 | 385 | 117 | 367 | 2.39e-30 | 123 |
| Msa1089940 | MtrunA17_Chr4g0004721 | 29.412 | 255 | 171 | 4 | 149 | 402 | 68 | 314 | 5.32e-29 | 117 |
| Msa1089940 | MtrunA17_Chr4g0004711 | 29.183 | 257 | 167 | 5 | 150 | 402 | 68 | 313 | 5.94e-28 | 114 |
| Msa1089940 | MtrunA17_Chr4g0004681 | 27.907 | 258 | 172 | 4 | 149 | 406 | 67 | 310 | 8.69e-27 | 111 |
| Msa1089940 | MtrunA17_Chr6g0450811 | 30.081 | 246 | 168 | 3 | 150 | 391 | 122 | 367 | 4.67e-26 | 110 |
| Msa1089940 | MtrunA17_Chr8g0351111 | 29.811 | 265 | 167 | 6 | 150 | 409 | 76 | 326 | 2.73e-23 | 101 |
| Msa1089940 | MtrunA17_Chr4g0004741 | 31.154 | 260 | 164 | 6 | 149 | 406 | 67 | 313 | 4.26e-22 | 97.4 |
| Msa1089940 | MtrunA17_Chr2g0331641 | 29.885 | 261 | 161 | 7 | 150 | 402 | 68 | 314 | 5.14e-20 | 91.3 |
| Msa1089940 | MtrunA17_Chr6g0450821 | 27.347 | 245 | 157 | 4 | 150 | 391 | 92 | 318 | 9.50e-20 | 90.9 |
| Msa1089940 | MtrunA17_Chr8g0351121 | 29.070 | 258 | 168 | 7 | 125 | 376 | 89 | 337 | 3.38e-19 | 89.7 |
| Msa1089940 | MtrunA17_Chr8g0351141 | 25.670 | 261 | 173 | 6 | 150 | 404 | 79 | 324 | 1.01e-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089940 | AT1G17745.1 | 75.962 | 624 | 137 | 4 | 16 | 628 | 3 | 624 | 0.0 | 957 |
| Msa1089940 | AT1G17745.2 | 72.657 | 651 | 138 | 6 | 16 | 628 | 3 | 651 | 0.0 | 937 |
| Msa1089940 | AT4G34200.1 | 77.034 | 553 | 127 | 0 | 76 | 628 | 51 | 603 | 0.0 | 892 |
| Msa1089940 | AT3G19480.1 | 76.427 | 543 | 128 | 0 | 86 | 628 | 46 | 588 | 0.0 | 869 |
| Msa1089940 | AT1G68010.1 | 34.564 | 298 | 172 | 7 | 115 | 390 | 50 | 346 | 1.14e-31 | 127 |
| Msa1089940 | AT1G68010.3 | 34.737 | 285 | 163 | 7 | 115 | 377 | 50 | 333 | 7.14e-31 | 124 |
| Msa1089940 | AT1G68010.2 | 34.783 | 299 | 171 | 8 | 115 | 390 | 50 | 347 | 3.54e-30 | 123 |
| Msa1089940 | AT1G79870.1 | 30.980 | 255 | 165 | 6 | 150 | 402 | 68 | 313 | 1.87e-27 | 113 |
| Msa1089940 | AT5G14780.2 | 31.532 | 222 | 148 | 3 | 156 | 373 | 112 | 333 | 4.10e-27 | 114 |
| Msa1089940 | AT5G14780.3 | 31.532 | 222 | 148 | 3 | 156 | 373 | 100 | 321 | 4.53e-27 | 113 |
| Msa1089940 | AT5G14780.1 | 31.532 | 222 | 148 | 3 | 156 | 373 | 126 | 347 | 9.70e-27 | 113 |
| Msa1089940 | AT1G12550.1 | 29.352 | 293 | 186 | 8 | 117 | 404 | 43 | 319 | 1.34e-26 | 111 |
| Msa1089940 | AT1G72190.1 | 30.380 | 237 | 154 | 4 | 150 | 377 | 116 | 350 | 3.50e-26 | 111 |
| Msa1089940 | AT2G45630.2 | 28.179 | 291 | 193 | 8 | 117 | 404 | 59 | 336 | 2.69e-22 | 99.0 |
| Msa1089940 | AT1G79870.2 | 29.528 | 254 | 151 | 6 | 150 | 402 | 68 | 294 | 6.83e-22 | 97.1 |
Find 162 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAACTCCTTAATTATTAT+TGG | 0.149075 | 7_3:+3545092 | Msa1089940:five_prime_UTR |
| TTCTCAAGAGCTTCCTTATT+TGG | 0.155413 | 7_3:-3548334 | None:intergenic |
| TGATACAGCACTTGCGAATT+TGG | 0.169233 | 7_3:-3548062 | None:intergenic |
| CTACAAGCTGCTACTGAATT+TGG | 0.182846 | 7_3:+3545771 | Msa1089940:CDS |
| AAAACAAACCTGTGCTTCTT+TGG | 0.221839 | 7_3:-3547265 | None:intergenic |
| TTCCTTAACTCCAACACTTT+TGG | 0.245786 | 7_3:+3545366 | Msa1089940:CDS |
| TGGGAAAACATTAGCAATAA+TGG | 0.251279 | 7_3:+3546478 | Msa1089940:CDS |
| CATTAAACATAGTAGATTAT+AGG | 0.252693 | 7_3:-3548870 | None:intergenic |
| CTTACATGTGTGGGATCTTT+TGG | 0.261096 | 7_3:+3548136 | Msa1089940:CDS |
| CCACATTGGATATTTGTATC+TGG | 0.271958 | 7_3:-3548036 | None:intergenic |
| CATGTACCATACCGGCTTTA+AGG | 0.285448 | 7_3:-3545899 | None:intergenic |
| ATCTTCTTGCATAGGTCTTC+TGG | 0.285848 | 7_3:-3545627 | None:intergenic |
| TTGCACTAACTTACTGTCTT+TGG | 0.289295 | 7_3:-3547202 | None:intergenic |
| TATTGGTTTCTGTTATATAT+AGG | 0.300629 | 7_3:+3545109 | Msa1089940:five_prime_UTR |
| ACATTAGCAATAATGGGATT+TGG | 0.308937 | 7_3:+3546485 | Msa1089940:CDS |
| ACAGAAACCAATAATAATTA+AGG | 0.311830 | 7_3:-3545099 | None:intergenic |
| ATGAGAGAGTTTAATGTTGT+TGG | 0.329026 | 7_3:-3545397 | None:intergenic |
| CATTTGTATTCATCCTTTGA+TGG | 0.330887 | 7_3:+3548839 | Msa1089940:three_prime_UTR |
| AAGGAAGCTCTTGAGAATAT+TGG | 0.341193 | 7_3:+3548340 | Msa1089940:CDS |
| GGTAAAGTCGGAAACATATT+AGG | 0.343317 | 7_3:+3548223 | Msa1089940:CDS |
| TCACCAGGTATTATCAGAAT+TGG | 0.344756 | 7_3:+3547727 | Msa1089940:intron |
| GGGAAAACATTAGCAATAAT+GGG | 0.345954 | 7_3:+3546479 | Msa1089940:CDS |
| TTGACAATTGTGTTTGATAT+TGG | 0.351660 | 7_3:-3547914 | None:intergenic |
| TTCCAAAAGTGTTGGAGTTA+AGG | 0.352126 | 7_3:-3545368 | None:intergenic |
| GCGTAGGAAGAAAGCGCTTA+TGG | 0.355828 | 7_3:+3548291 | Msa1089940:CDS |
| GTTAAGGAATGAGAGATTAG+AGG | 0.361871 | 7_3:-3545352 | None:intergenic |
| TTGAAAACTTTGTTAGTAGT+TGG | 0.364330 | 7_3:-3546677 | None:intergenic |
| GCCTGCTTCTCCGAGTTTCT+CGG | 0.380012 | 7_3:-3545553 | None:intergenic |
| CGTCGATGAAGAGCCAAATA+AGG | 0.383184 | 7_3:+3548321 | Msa1089940:CDS |
| AGATAGAAGAAAAGGTTTAG+AGG | 0.383296 | 7_3:-3545195 | None:intergenic |
| GCTCTATCAGCTGGAGCATA+AGG | 0.392374 | 7_3:-3546572 | None:intergenic |
| TGAGGTTTGGTGGTTGGTGG+AGG | 0.397943 | 7_3:-3545039 | None:intergenic |
| ATGTACCATACCGGCTTTAA+GGG | 0.400835 | 7_3:-3545898 | None:intergenic |
| TTCTTCAACTTGAGGTTTGG+TGG | 0.402779 | 7_3:-3545049 | None:intergenic |
| GGTGTGGATGTGAGCTTAGA+AGG | 0.404203 | 7_3:+3548157 | Msa1089940:CDS |
| AAAGGAAAGTTGAAAGTTGT+TGG | 0.405100 | 7_3:+3545717 | Msa1089940:CDS |
| GTCTAGGTCATCGGGACCCC+TGG | 0.409158 | 7_3:-3547849 | None:intergenic |
| GATTACATCGCAAAGCAAAA+AGG | 0.410558 | 7_3:+3547950 | Msa1089940:CDS |
| CAAGTATGTTGGAGTGTCTA+TGG | 0.411120 | 7_3:+3546454 | Msa1089940:CDS |
| AAGTAATACTATATATATAT+AGG | 0.415410 | 7_3:+3548451 | Msa1089940:three_prime_UTR |
| ATAATGGGATTTGGAAAAGT+TGG | 0.416575 | 7_3:+3546494 | Msa1089940:CDS |
| ACTGATCAGCCTGGGATGAT+TGG | 0.420709 | 7_3:+3548202 | Msa1089940:CDS |
| TTAGTCAAAGCTCTTGATAG+TGG | 0.425387 | 7_3:+3546779 | Msa1089940:CDS |
| GATAGAAGAAAAGGTTTAGA+GGG | 0.425599 | 7_3:-3545194 | None:intergenic |
| ACTTGAGGTTTGGTGGTTGG+TGG | 0.427268 | 7_3:-3545042 | None:intergenic |
| AACCTGTGCTTCTTTGGTGC+TGG | 0.432833 | 7_3:-3547259 | None:intergenic |
| TTGGTTTCAGAAGAGAAGAT+AGG | 0.433144 | 7_3:-3545318 | None:intergenic |
| GCAAGGCGTGCAAAAGGATT+AGG | 0.435231 | 7_3:+3546527 | Msa1089940:CDS |
| TTCAATATAGATAGAAGAAA+AGG | 0.437478 | 7_3:-3545203 | None:intergenic |
| GATTGCTCTTCTTGCTGCTA+TGG | 0.439120 | 7_3:+3545848 | Msa1089940:CDS |
| CGATGTAATCAGCATTTACA+AGG | 0.440577 | 7_3:-3547937 | None:intergenic |
| ATTGACGGAAAAGTGAAGTA+TGG | 0.441680 | 7_3:+3548103 | Msa1089940:CDS |
| AACAACAGAAACAACGTTGT+TGG | 0.441735 | 7_3:-3545496 | None:intergenic |
| AAGAAAGCGCTTATGGCTAT+TGG | 0.442305 | 7_3:+3548298 | Msa1089940:CDS |
| GCAATTATTTGAAAGGGAAA+AGG | 0.449772 | 7_3:+3548743 | Msa1089940:three_prime_UTR |
| GTGATTGCTACTCCTCATCT+TGG | 0.451139 | 7_3:+3547234 | Msa1089940:CDS |
| TCCGAGAAACTCGGAGAAGC+AGG | 0.463753 | 7_3:+3545552 | Msa1089940:CDS |
| TTCTCAGCCAGCACAACATA+TGG | 0.465579 | 7_3:-3547752 | None:intergenic |
| TCAACTTGAGGTTTGGTGGT+TGG | 0.467039 | 7_3:-3545045 | None:intergenic |
| ACTAGTGCAATTATTTGAAA+GGG | 0.469056 | 7_3:+3548737 | Msa1089940:three_prime_UTR |
| ATATATATATAGGTATTGAT+TGG | 0.470124 | 7_3:+3548461 | Msa1089940:three_prime_UTR |
| CATCAAAGGATGAATACAAA+TGG | 0.471148 | 7_3:-3548838 | None:intergenic |
| TGGAGCTGTGCCTGCTATTG+AGG | 0.472247 | 7_3:+3548360 | Msa1089940:CDS |
| TATGGCTCGTAATGTTTCTC+AGG | 0.473207 | 7_3:+3545866 | Msa1089940:CDS |
| GAAGAAAAGGTTTAGAGGGA+AGG | 0.473708 | 7_3:-3545190 | None:intergenic |
| AACTAGTGCAATTATTTGAA+AGG | 0.474444 | 7_3:+3548736 | Msa1089940:three_prime_UTR |
| GCTTGAGAAAAGTGATAGCT+TGG | 0.477598 | 7_3:+3548521 | Msa1089940:three_prime_UTR |
| TGTATCTGGATTGACTCAAC+AGG | 0.483012 | 7_3:-3548022 | None:intergenic |
| TTAGCTGTGCAGTTGGTATC+CGG | 0.483277 | 7_3:+3547785 | Msa1089940:CDS |
| AGATTGGATTCCACTTCCTC+CGG | 0.486443 | 7_3:-3547804 | None:intergenic |
| GAAGTGGCAAGGCGTGCAAA+AGG | 0.492552 | 7_3:+3546521 | Msa1089940:CDS |
| AACTGCTGTCAATGCTCCTA+TGG | 0.495186 | 7_3:+3547446 | Msa1089940:CDS |
| AGTGGTTTACCGATCGGCCA+GGG | 0.499241 | 7_3:+3547832 | Msa1089940:CDS |
| AAGAAAAGGTTTAGAGGGAA+GGG | 0.500168 | 7_3:-3545189 | None:intergenic |
| ATGAGCTAGTTCCACTTGGT+TGG | 0.500510 | 7_3:-3548791 | None:intergenic |
| ACTAACTTACTGTCTTTGGC+TGG | 0.501929 | 7_3:-3547198 | None:intergenic |
| TTGAAAGTTGTTGGTAGAGC+TGG | 0.503758 | 7_3:+3545726 | Msa1089940:CDS |
| GCTGTTGTTGGTGCATTGAA+TGG | 0.504053 | 7_3:+3547411 | Msa1089940:CDS |
| GAAATAGCAGAGGCTGTTGT+TGG | 0.504211 | 7_3:+3547399 | Msa1089940:CDS |
| ACAAGACAAGTGTTTGAAGC+AGG | 0.504544 | 7_3:+3545693 | Msa1089940:CDS |
| TGATAGTGGAATTGTTGCTC+AGG | 0.505410 | 7_3:+3546793 | Msa1089940:CDS |
| TGCTCCTATGGTTGCTCCTG+AGG | 0.505857 | 7_3:+3547458 | Msa1089940:CDS |
| ATTGGCTCCATATGTTGTGC+TGG | 0.505952 | 7_3:+3547745 | Msa1089940:CDS |
| AATTGAGTTGGTACAAGAAG+AGG | 0.507359 | 7_3:-3545286 | None:intergenic |
| ACTATTGCTGCTGCTGAACA+TGG | 0.507722 | 7_3:+3545825 | Msa1089940:CDS |
| CAAAAGATCCCACACATGTA+AGG | 0.508676 | 7_3:-3548135 | None:intergenic |
| AAGTCTGGTGTCTAGGTCAT+CGG | 0.511273 | 7_3:-3547858 | None:intergenic |
| AAGTGGTTTACCGATCGGCC+AGG | 0.511493 | 7_3:+3547831 | Msa1089940:CDS |
| CTTCGAGCCATGATCACAAA+AGG | 0.512301 | 7_3:+3547881 | Msa1089940:CDS |
| CAGTTGGTATCCGGAGGAAG+TGG | 0.513484 | 7_3:+3547794 | Msa1089940:CDS |
| CTCGAAGAAGTCTGGTGTCT+AGG | 0.515153 | 7_3:-3547865 | None:intergenic |
| GATCATGGCTCGAAGAAGTC+TGG | 0.515479 | 7_3:-3547873 | None:intergenic |
| AGTCTGGTGTCTAGGTCATC+GGG | 0.515480 | 7_3:-3547857 | None:intergenic |
| TTTAAGACAATTAGGACATG+TGG | 0.518255 | 7_3:+3545584 | Msa1089940:CDS |
| TGCGAATTTGGACTCCACAT+TGG | 0.521056 | 7_3:-3548050 | None:intergenic |
| CTCTATCAGCTGGAGCATAA+GGG | 0.521140 | 7_3:-3546571 | None:intergenic |
| CTCTTTCCTCGCTTATGCGA+AGG | 0.522585 | 7_3:-3547973 | None:intergenic |
| ATTGACTCAACAGGTAGCTC+AGG | 0.525036 | 7_3:-3548013 | None:intergenic |
| TGCAGACAGACTGATCAGCC+TGG | 0.528856 | 7_3:+3548193 | Msa1089940:CDS |
| AACACAAACTCCTCAATAGC+AGG | 0.528948 | 7_3:-3548370 | None:intergenic |
| TTGGTGCTGGCTCCAAGATG+AGG | 0.530869 | 7_3:-3547246 | None:intergenic |
| TGGAATCCAATCTGTAAAAG+TGG | 0.532831 | 7_3:+3547814 | Msa1089940:CDS |
| TTGTTGGTAGAGCTGGTGTT+GGG | 0.537332 | 7_3:+3545733 | Msa1089940:CDS |
| TTTGACTCAATAGGAGGGTG+TGG | 0.537514 | 7_3:+3547371 | Msa1089940:intron |
| AACTTACTGTCTTTGGCTGG+AGG | 0.538388 | 7_3:-3547195 | None:intergenic |
| TTGTTAGTAGTTGGAGTGAG+AGG | 0.541743 | 7_3:-3546668 | None:intergenic |
| TCAGAAGAGAAGATAGGTGA+AGG | 0.543290 | 7_3:-3545312 | None:intergenic |
| ACAGCACGTGCTCTATCAGC+TGG | 0.543522 | 7_3:-3546581 | None:intergenic |
| TGGAAAAGTTGGATCTGAAG+TGG | 0.544222 | 7_3:+3546505 | Msa1089940:CDS |
| AGCCAGCACCAAAGAAGCAC+AGG | 0.545917 | 7_3:+3547257 | Msa1089940:CDS |
| TTTACCTCAGGAGCAACCAT+AGG | 0.548169 | 7_3:-3547462 | None:intergenic |
| GCAAGTGCTGTATCAGAGAC+TGG | 0.549715 | 7_3:+3548070 | Msa1089940:CDS |
| TTCTCGGAGACCAAGATCGT+TGG | 0.552120 | 7_3:-3545537 | None:intergenic |
| ATAGGTAAATAAACCATCAA+AGG | 0.554944 | 7_3:-3548852 | None:intergenic |
| TTATATGAGCTAGTTCCACT+TGG | 0.556440 | 7_3:-3548795 | None:intergenic |
| CATCGGGACCCCTGGCCGAT+CGG | 0.557463 | 7_3:-3547841 | None:intergenic |
| GTTGTTGGTAGAGCTGGTGT+TGG | 0.558071 | 7_3:+3545732 | Msa1089940:CDS |
| GTGTGGATGTGAGCTTAGAA+GGG | 0.562427 | 7_3:+3548158 | Msa1089940:CDS |
| CCGACTTTACCAATCATCCC+AGG | 0.564497 | 7_3:-3548211 | None:intergenic |
| TGCTGGCTGAGAAGCTAGGA+AGG | 0.566544 | 7_3:+3547762 | Msa1089940:CDS |
| GCTGATAGAGCACGTGCTGT+TGG | 0.568204 | 7_3:+3546584 | Msa1089940:CDS |
| ATCTTGGTCTCCGAGAAACT+CGG | 0.570682 | 7_3:+3545543 | Msa1089940:CDS |
| ATGTTGGAGTGTCTATGGTT+GGG | 0.571426 | 7_3:+3546459 | Msa1089940:CDS |
| GGTAATGATTCCAAAAGTGT+TGG | 0.574616 | 7_3:-3545376 | None:intergenic |
| AGGAAGGTTAGCTGTGCAGT+TGG | 0.575316 | 7_3:+3547778 | Msa1089940:CDS |
| CATGATACAAAACTTAGTAC+AGG | 0.575904 | 7_3:-3548612 | None:intergenic |
| TGGCTGAGGAACAAGTATGT+TGG | 0.577015 | 7_3:+3546443 | Msa1089940:CDS |
| AGCTTGAGATCTTCTTGCAT+AGG | 0.577862 | 7_3:-3545635 | None:intergenic |
| ACTGGTCAGATAAGCATTGA+CGG | 0.579892 | 7_3:+3548088 | Msa1089940:CDS |
| CAAGTGTTTGAAGCAGGGAA+AGG | 0.581477 | 7_3:+3545699 | Msa1089940:CDS |
| ATCATCAATGTTGCTAGAGG+TGG | 0.581813 | 7_3:+3546737 | Msa1089940:CDS |
| AGGTGAAGGAAGAATTGAGT+TGG | 0.583715 | 7_3:-3545298 | None:intergenic |
| TATGTTGGAGTGTCTATGGT+TGG | 0.584348 | 7_3:+3546458 | Msa1089940:CDS |
| TGTAAAAGTGGTTTACCGAT+CGG | 0.589128 | 7_3:+3547826 | Msa1089940:CDS |
| GCTGATGCTTCCCTTAAAGC+CGG | 0.593057 | 7_3:+3545888 | Msa1089940:CDS |
| CCTGGGATGATTGGTAAAGT+CGG | 0.595667 | 7_3:+3548211 | Msa1089940:CDS |
| ATAGCTTGGTTATGAAGTAA+TGG | 0.595931 | 7_3:+3548535 | Msa1089940:three_prime_UTR |
| GCAGCAATAGTATTAGCAGT+AGG | 0.600020 | 7_3:-3545813 | None:intergenic |
| ACACCACACCTTACATGTGT+GGG | 0.601870 | 7_3:+3548127 | Msa1089940:CDS |
| TTATTTGAAAGGGAAAAGGT+AGG | 0.602025 | 7_3:+3548747 | Msa1089940:three_prime_UTR |
| TACACCACACCTTACATGTG+TGG | 0.602905 | 7_3:+3548126 | Msa1089940:CDS |
| CTATTGCTGCTGCTGAACAT+GGG | 0.618691 | 7_3:+3545826 | Msa1089940:CDS |
| CAAGACAAGTGTTTGAAGCA+GGG | 0.623927 | 7_3:+3545694 | Msa1089940:CDS |
| TGGTGTTGGGATTGATAATG+TGG | 0.634025 | 7_3:+3545746 | Msa1089940:CDS |
| GTTGTGCTGGCTGAGAAGCT+AGG | 0.640220 | 7_3:+3547758 | Msa1089940:CDS |
| AATGTGATGCACCAACCAAG+TGG | 0.640895 | 7_3:+3548780 | Msa1089940:three_prime_UTR |
| CATAAGCGAGGAAAGAGTAG+TGG | 0.646950 | 7_3:+3547979 | Msa1089940:CDS |
| AAGTTGGATCTGAAGTGGCA+AGG | 0.647081 | 7_3:+3546510 | Msa1089940:CDS |
| CCAGATACAAATATCCAATG+TGG | 0.650082 | 7_3:+3548036 | Msa1089940:CDS |
| GCAGACAGACTGATCAGCCT+GGG | 0.652171 | 7_3:+3548194 | Msa1089940:CDS |
| GTGGTTTACCGATCGGCCAG+GGG | 0.652751 | 7_3:+3547833 | Msa1089940:CDS |
| AAAAGGCCTTCGCATAAGCG+AGG | 0.668434 | 7_3:+3547967 | Msa1089940:CDS |
| GATCCCACACATGTAAGGTG+TGG | 0.673309 | 7_3:-3548130 | None:intergenic |
| ATAATTAAGGAGTTGATGTG+CGG | 0.675532 | 7_3:-3545086 | None:intergenic |
| GCGTCGGAAGAACATCGCGT+AGG | 0.678508 | 7_3:+3548275 | Msa1089940:CDS |
| AATGTGAGCTTTATGAGCGT+CGG | 0.682198 | 7_3:+3548259 | Msa1089940:CDS |
| GCTGTGCAGTTGGTATCCGG+AGG | 0.685286 | 7_3:+3547788 | Msa1089940:CDS |
| TGTGGCTATTGAAATAGCAG+AGG | 0.685958 | 7_3:+3547389 | Msa1089940:CDS |
| AGAATCATCAATGTTGCTAG+AGG | 0.702837 | 7_3:+3546734 | Msa1089940:CDS |
| GATGCTTTGATTGTGAGAAG+CGG | 0.715751 | 7_3:+3545660 | Msa1089940:CDS |
| AGCTCTTGATGTGTTCACTG+AGG | 0.735803 | 7_3:+3547170 | Msa1089940:CDS |
| GTGAAGTGAGATGAAATCAG+CGG | 0.758782 | 7_3:-3546642 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAATACTATATATATAT+AGG | + | chr7_3:3548451-3548470 | Msa1089940:three_prime_UTR | 10.0% |
| !! | ATATAGTTTAATAGTATTAG+TGG | + | chr7_3:3545982-3546001 | Msa1089940:intron | 15.0% |
| !!! | AGGTTAGTTTTTAATTTATA+CGG | + | chr7_3:3546054-3546073 | Msa1089940:intron | 15.0% |
| !!! | TCTTGTTTGAAATATATTTA+AGG | + | chr7_3:3546220-3546239 | Msa1089940:intron | 15.0% |
| !!! | ATATATATATAGGTATTGAT+TGG | + | chr7_3:3548461-3548480 | Msa1089940:three_prime_UTR | 15.0% |
| !! | ATCAACTCCTTAATTATTAT+TGG | + | chr7_3:3545092-3545111 | Msa1089940:five_prime_UTR | 20.0% |
| !! | ACAGAAACCAATAATAATTA+AGG | - | chr7_3:3545102-3545121 | None:intergenic | 20.0% |
| !!! | TATTGGTTTCTGTTATATAT+AGG | + | chr7_3:3545109-3545128 | Msa1089940:five_prime_UTR | 20.0% |
| !!! | AAATTTTGAATTGTGATTTG+AGG | - | chr7_3:3545155-3545174 | None:intergenic | 20.0% |
| !! | TTCAATATAGATAGAAGAAA+AGG | - | chr7_3:3545206-3545225 | None:intergenic | 20.0% |
| !!! | TTACAAGTTTTAAGACAATT+AGG | + | chr7_3:3545576-3545595 | Msa1089940:CDS | 20.0% |
| !!! | TACACAAAAAGTACATTTTT+AGG | + | chr7_3:3546304-3546323 | Msa1089940:intron | 20.0% |
| !! | TGTAAAAACACACATATTAT+AGG | - | chr7_3:3546369-3546388 | None:intergenic | 20.0% |
| !! | GATAGTATAATAGTAATTCA+AGG | - | chr7_3:3546847-3546866 | None:intergenic | 20.0% |
| !! | AAATAGTAAATGGTAATTCA+AGG | - | chr7_3:3546937-3546956 | None:intergenic | 20.0% |
| !!! | TGAATTACCATTTACTATTT+TGG | + | chr7_3:3546937-3546956 | Msa1089940:intron | 20.0% |
| !!! | AAATAGAAATGTCATTTGAA+TGG | - | chr7_3:3547130-3547149 | None:intergenic | 20.0% |
| !!! | ATTTCTATTTTGTTTGAATG+TGG | + | chr7_3:3547140-3547159 | Msa1089940:intron | 20.0% |
| !! | AATTGATGAGAAAAAAAACT+TGG | - | chr7_3:3547352-3547371 | None:intergenic | 20.0% |
| !! | CATTAAACATAGTAGATTAT+AGG | - | chr7_3:3548873-3548892 | None:intergenic | 20.0% |
| !!! | ATTAGAGGATTTTGAAGATT+TGG | - | chr7_3:3545340-3545359 | None:intergenic | 25.0% |
| !!! | TTTGAGTTGTTTGTTTTGTT+TGG | - | chr7_3:3545476-3545495 | None:intergenic | 25.0% |
| ! | TAACGACAAATGTTAGTAAT+TGG | + | chr7_3:3546026-3546045 | Msa1089940:intron | 25.0% |
| ! | AATGTTAGTAATTGGTTGTT+AGG | + | chr7_3:3546034-3546053 | Msa1089940:intron | 25.0% |
| !!! | CAAAGTTTTAAATTGCAGTT+GGG | + | chr7_3:3546167-3546186 | Msa1089940:intron | 25.0% |
| !! | TGATAATTTTTGCAGGAAAA+TGG | + | chr7_3:3546423-3546442 | Msa1089940:intron | 25.0% |
| ! | TTGAAAACTTTGTTAGTAGT+TGG | - | chr7_3:3546680-3546699 | None:intergenic | 25.0% |
| ! | AACATGTTAATTGAAGTAAG+AGG | - | chr7_3:3546824-3546843 | None:intergenic | 25.0% |
| ! | GAAAATTATGTGAGCTAAAA+GGG | - | chr7_3:3547326-3547345 | None:intergenic | 25.0% |
| ! | AGAAAATTATGTGAGCTAAA+AGG | - | chr7_3:3547327-3547346 | None:intergenic | 25.0% |
| !! | AAAGCATAGTTTAATTTCCA+TGG | - | chr7_3:3547546-3547565 | None:intergenic | 25.0% |
| ! | ATGGAAATTAAACTATGCTT+TGG | + | chr7_3:3547545-3547564 | Msa1089940:intron | 25.0% |
| ! | TGGAAATTAAACTATGCTTT+GGG | + | chr7_3:3547546-3547565 | Msa1089940:intron | 25.0% |
| !! | ATTAGAACTAGTTTAGACAT+AGG | + | chr7_3:3547613-3547632 | Msa1089940:intron | 25.0% |
| ! | TTGACAATTGTGTTTGATAT+TGG | - | chr7_3:3547917-3547936 | None:intergenic | 25.0% |
| ! | AACTAGTGCAATTATTTGAA+AGG | + | chr7_3:3548736-3548755 | Msa1089940:three_prime_UTR | 25.0% |
| ! | ACTAGTGCAATTATTTGAAA+GGG | + | chr7_3:3548737-3548756 | Msa1089940:three_prime_UTR | 25.0% |
| ! | ATAGGTAAATAAACCATCAA+AGG | - | chr7_3:3548855-3548874 | None:intergenic | 25.0% |
| ! | TTTTTCTTCAACTTGAGGTT+TGG | - | chr7_3:3545055-3545074 | None:intergenic | 30.0% |
| ! | AGAGATTTTTCTTCAACTTG+AGG | - | chr7_3:3545060-3545079 | None:intergenic | 30.0% |
| !! | ATAATTAAGGAGTTGATGTG+CGG | - | chr7_3:3545089-3545108 | None:intergenic | 30.0% |
| GATAGAAGAAAAGGTTTAGA+GGG | - | chr7_3:3545197-3545216 | None:intergenic | 30.0% | |
| AGATAGAAGAAAAGGTTTAG+AGG | - | chr7_3:3545198-3545217 | None:intergenic | 30.0% | |
| ATGAGAGAGTTTAATGTTGT+TGG | - | chr7_3:3545400-3545419 | None:intergenic | 30.0% | |
| !!! | TGTTTGTTTTGTTTGGTCAA+CGG | - | chr7_3:3545469-3545488 | None:intergenic | 30.0% |
| AAATGAAAAACCAACGATCT+TGG | + | chr7_3:3545527-3545546 | Msa1089940:CDS | 30.0% | |
| ! | TTTAAGACAATTAGGACATG+TGG | + | chr7_3:3545584-3545603 | Msa1089940:CDS | 30.0% |
| AAAGGAAAGTTGAAAGTTGT+TGG | + | chr7_3:3545717-3545736 | Msa1089940:CDS | 30.0% | |
| ! | CCAACTGCAATTTAAAACTT+TGG | - | chr7_3:3546169-3546188 | None:intergenic | 30.0% |
| !!! | CCAAAGTTTTAAATTGCAGT+TGG | + | chr7_3:3546166-3546185 | Msa1089940:intron | 30.0% |
| ! | ACTACTATGAGTATTTGTTG+AGG | + | chr7_3:3546388-3546407 | Msa1089940:intron | 30.0% |
| !!! | GAGATGTTGATAATTTTTGC+AGG | + | chr7_3:3546416-3546435 | Msa1089940:intron | 30.0% |
| TGGGAAAACATTAGCAATAA+TGG | + | chr7_3:3546478-3546497 | Msa1089940:CDS | 30.0% | |
| GGGAAAACATTAGCAATAAT+GGG | + | chr7_3:3546479-3546498 | Msa1089940:CDS | 30.0% | |
| ! | ACATTAGCAATAATGGGATT+TGG | + | chr7_3:3546485-3546504 | Msa1089940:CDS | 30.0% |
| ! | ATAATGGGATTTGGAAAAGT+TGG | + | chr7_3:3546494-3546513 | Msa1089940:CDS | 30.0% |
| ! | TACTTTTGCTAAGATGAAGA+AGG | + | chr7_3:3546706-3546725 | Msa1089940:CDS | 30.0% |
| ! | ACTTTTGCTAAGATGAAGAA+GGG | + | chr7_3:3546707-3546726 | Msa1089940:CDS | 30.0% |
| TCAAGGAACATGTAAACTAT+AGG | - | chr7_3:3546920-3546939 | None:intergenic | 30.0% | |
| GCGATTTCCAAAATAGTAAA+TGG | - | chr7_3:3546947-3546966 | None:intergenic | 30.0% | |
| GAAGAAGAAAAAATGCAAGT+AGG | - | chr7_3:3547301-3547320 | None:intergenic | 30.0% | |
| !!! | CTCATCAATTTTGACTCAAT+AGG | + | chr7_3:3547362-3547381 | Msa1089940:intron | 30.0% |
| !!! | ATCAATTTTGACTCAATAGG+AGG | + | chr7_3:3547365-3547384 | Msa1089940:intron | 30.0% |
| !!! | TCAATTTTGACTCAATAGGA+GGG | + | chr7_3:3547366-3547385 | Msa1089940:intron | 30.0% |
| AGCATACTAATGTTACAATG+TGG | - | chr7_3:3547495-3547514 | None:intergenic | 30.0% | |
| AAGCAAAAAAAGAACAATGC+AGG | - | chr7_3:3547675-3547694 | None:intergenic | 30.0% | |
| TAATTGTTTGCAATTTCACC+AGG | + | chr7_3:3547712-3547731 | Msa1089940:intron | 30.0% | |
| ! | AATAATGCCTTTTGTGATCA+TGG | - | chr7_3:3547891-3547910 | None:intergenic | 30.0% |
| ATAGCTTGGTTATGAAGTAA+TGG | + | chr7_3:3548535-3548554 | Msa1089940:three_prime_UTR | 30.0% | |
| CATGATACAAAACTTAGTAC+AGG | - | chr7_3:3548615-3548634 | None:intergenic | 30.0% | |
| !! | CTGTACTAAGTTTTGTATCA+TGG | + | chr7_3:3548613-3548632 | Msa1089940:three_prime_UTR | 30.0% |
| GCAATTATTTGAAAGGGAAA+AGG | + | chr7_3:3548743-3548762 | Msa1089940:three_prime_UTR | 30.0% | |
| TTATTTGAAAGGGAAAAGGT+AGG | + | chr7_3:3548747-3548766 | Msa1089940:three_prime_UTR | 30.0% | |
| CATCAAAGGATGAATACAAA+TGG | - | chr7_3:3548841-3548860 | None:intergenic | 30.0% | |
| CATTTGTATTCATCCTTTGA+TGG | + | chr7_3:3548839-3548858 | Msa1089940:three_prime_UTR | 30.0% | |
| AAGAAAAGGTTTAGAGGGAA+GGG | - | chr7_3:3545192-3545211 | None:intergenic | 35.0% | |
| !! | AATTGAGTTGGTACAAGAAG+AGG | - | chr7_3:3545289-3545308 | None:intergenic | 35.0% |
| TTGGTTTCAGAAGAGAAGAT+AGG | - | chr7_3:3545321-3545340 | None:intergenic | 35.0% | |
| GTTAAGGAATGAGAGATTAG+AGG | - | chr7_3:3545355-3545374 | None:intergenic | 35.0% | |
| ! | TTCCTTAACTCCAACACTTT+TGG | + | chr7_3:3545366-3545385 | Msa1089940:CDS | 35.0% |
| !! | TTCCAAAAGTGTTGGAGTTA+AGG | - | chr7_3:3545371-3545390 | None:intergenic | 35.0% |
| ! | GGTAATGATTCCAAAAGTGT+TGG | - | chr7_3:3545379-3545398 | None:intergenic | 35.0% |
| AACAACAGAAACAACGTTGT+TGG | - | chr7_3:3545499-3545518 | None:intergenic | 35.0% | |
| ATCATGAACATGTACCATAC+CGG | - | chr7_3:3545910-3545929 | None:intergenic | 35.0% | |
| GATTGACGTATATTCAACGT+TGG | + | chr7_3:3546098-3546117 | Msa1089940:intron | 35.0% | |
| TTCAAACAAGAGATCTAGCA+AGG | - | chr7_3:3546211-3546230 | None:intergenic | 35.0% | |
| AGAATCATCAATGTTGCTAG+AGG | + | chr7_3:3546734-3546753 | Msa1089940:CDS | 35.0% | |
| TTAGTCAAAGCTCTTGATAG+TGG | + | chr7_3:3546779-3546798 | Msa1089940:CDS | 35.0% | |
| GATCAACACAATTCAGTGAA+TGG | - | chr7_3:3547087-3547106 | None:intergenic | 35.0% | |
| !! | ATTTTGTTTGAATGTGGAGC+AGG | + | chr7_3:3547146-3547165 | Msa1089940:intron | 35.0% |
| TTGCACTAACTTACTGTCTT+TGG | - | chr7_3:3547205-3547224 | None:intergenic | 35.0% | |
| AAAACAAACCTGTGCTTCTT+TGG | - | chr7_3:3547268-3547287 | None:intergenic | 35.0% | |
| !!! | TGTGGTTGTTTTTTTACCTC+AGG | - | chr7_3:3547477-3547496 | None:intergenic | 35.0% |
| ! | GCATAGTTTAATTTCCATGG+AGG | - | chr7_3:3547543-3547562 | None:intergenic | 35.0% |
| AGTTTAGACATAGGTCACAT+TGG | + | chr7_3:3547622-3547641 | Msa1089940:intron | 35.0% | |
| TCACCAGGTATTATCAGAAT+TGG | + | chr7_3:3547727-3547746 | Msa1089940:intron | 35.0% | |
| TGGAATCCAATCTGTAAAAG+TGG | + | chr7_3:3547814-3547833 | Msa1089940:CDS | 35.0% | |
| !! | GGTAAACCACTTTTACAGAT+TGG | - | chr7_3:3547823-3547842 | None:intergenic | 35.0% |
| TGTAAAAGTGGTTTACCGAT+CGG | + | chr7_3:3547826-3547845 | Msa1089940:CDS | 35.0% | |
| CGATGTAATCAGCATTTACA+AGG | - | chr7_3:3547940-3547959 | None:intergenic | 35.0% | |
| GATTACATCGCAAAGCAAAA+AGG | + | chr7_3:3547950-3547969 | Msa1089940:CDS | 35.0% | |
| CCACATTGGATATTTGTATC+TGG | - | chr7_3:3548039-3548058 | None:intergenic | 35.0% | |
| CCAGATACAAATATCCAATG+TGG | + | chr7_3:3548036-3548055 | Msa1089940:CDS | 35.0% | |
| ATTGACGGAAAAGTGAAGTA+TGG | + | chr7_3:3548103-3548122 | Msa1089940:CDS | 35.0% | |
| GGTAAAGTCGGAAACATATT+AGG | + | chr7_3:3548223-3548242 | Msa1089940:CDS | 35.0% | |
| TTCTCAAGAGCTTCCTTATT+TGG | - | chr7_3:3548337-3548356 | None:intergenic | 35.0% | |
| AAGGAAGCTCTTGAGAATAT+TGG | + | chr7_3:3548340-3548359 | Msa1089940:CDS | 35.0% | |
| TTATATGAGCTAGTTCCACT+TGG | - | chr7_3:3548798-3548817 | None:intergenic | 35.0% | |
| TTCTTCAACTTGAGGTTTGG+TGG | - | chr7_3:3545052-3545071 | None:intergenic | 40.0% | |
| GAAGAAAAGGTTTAGAGGGA+AGG | - | chr7_3:3545193-3545212 | None:intergenic | 40.0% | |
| AGGTGAAGGAAGAATTGAGT+TGG | - | chr7_3:3545301-3545320 | None:intergenic | 40.0% | |
| TCAGAAGAGAAGATAGGTGA+AGG | - | chr7_3:3545315-3545334 | None:intergenic | 40.0% | |
| !! | CTCTCAACAACGTTGTTTTG+TGG | + | chr7_3:3545425-3545444 | Msa1089940:CDS | 40.0% |
| ATCTTCTTGCATAGGTCTTC+TGG | - | chr7_3:3545630-3545649 | None:intergenic | 40.0% | |
| AGCTTGAGATCTTCTTGCAT+AGG | - | chr7_3:3545638-3545657 | None:intergenic | 40.0% | |
| GATGCTTTGATTGTGAGAAG+CGG | + | chr7_3:3545660-3545679 | Msa1089940:CDS | 40.0% | |
| ! | ACAAGACAAGTGTTTGAAGC+AGG | + | chr7_3:3545693-3545712 | Msa1089940:CDS | 40.0% |
| ! | CAAGACAAGTGTTTGAAGCA+GGG | + | chr7_3:3545694-3545713 | Msa1089940:CDS | 40.0% |
| ! | TTGAAAGTTGTTGGTAGAGC+TGG | + | chr7_3:3545726-3545745 | Msa1089940:CDS | 40.0% |
| !! | TGGTGTTGGGATTGATAATG+TGG | + | chr7_3:3545746-3545765 | Msa1089940:CDS | 40.0% |
| CTACAAGCTGCTACTGAATT+TGG | + | chr7_3:3545771-3545790 | Msa1089940:CDS | 40.0% | |
| GCAGCAATAGTATTAGCAGT+AGG | - | chr7_3:3545816-3545835 | None:intergenic | 40.0% | |
| TATGGCTCGTAATGTTTCTC+AGG | + | chr7_3:3545866-3545885 | Msa1089940:CDS | 40.0% | |
| !! | ATGTACCATACCGGCTTTAA+GGG | - | chr7_3:3545901-3545920 | None:intergenic | 40.0% |
| ! | TTTTTGCAGGAAAATGGCTG+AGG | + | chr7_3:3546429-3546448 | Msa1089940:intron | 40.0% |
| ! | CAAGTATGTTGGAGTGTCTA+TGG | + | chr7_3:3546454-3546473 | Msa1089940:CDS | 40.0% |
| ! | TATGTTGGAGTGTCTATGGT+TGG | + | chr7_3:3546458-3546477 | Msa1089940:CDS | 40.0% |
| ! | ATGTTGGAGTGTCTATGGTT+GGG | + | chr7_3:3546459-3546478 | Msa1089940:CDS | 40.0% |
| TGGAAAAGTTGGATCTGAAG+TGG | + | chr7_3:3546505-3546524 | Msa1089940:CDS | 40.0% | |
| GTGAAGTGAGATGAAATCAG+CGG | - | chr7_3:3546645-3546664 | None:intergenic | 40.0% | |
| TTGTTAGTAGTTGGAGTGAG+AGG | - | chr7_3:3546671-3546690 | None:intergenic | 40.0% | |
| ATCATCAATGTTGCTAGAGG+TGG | + | chr7_3:3546737-3546756 | Msa1089940:CDS | 40.0% | |
| !! | TGATAGTGGAATTGTTGCTC+AGG | + | chr7_3:3546793-3546812 | Msa1089940:CDS | 40.0% |
| CTAGCAATGTTCAACTCGTT+TGG | + | chr7_3:3546873-3546892 | Msa1089940:intron | 40.0% | |
| TTCAACTCGTTTGGAAATCG+TGG | + | chr7_3:3546882-3546901 | Msa1089940:intron | 40.0% | |
| TGGAAATCGCAATTGCATAG+TGG | + | chr7_3:3546957-3546976 | Msa1089940:intron | 40.0% | |
| ACTAACTTACTGTCTTTGGC+TGG | - | chr7_3:3547201-3547220 | None:intergenic | 40.0% | |
| TGTGGCTATTGAAATAGCAG+AGG | + | chr7_3:3547389-3547408 | Msa1089940:CDS | 40.0% | |
| GAGCCAATTCTGATAATACC+TGG | - | chr7_3:3547733-3547752 | None:intergenic | 40.0% | |
| ! | TGTATCTGGATTGACTCAAC+AGG | - | chr7_3:3548025-3548044 | None:intergenic | 40.0% |
| TGATACAGCACTTGCGAATT+TGG | - | chr7_3:3548065-3548084 | None:intergenic | 40.0% | |
| !! | ACTGGTCAGATAAGCATTGA+CGG | + | chr7_3:3548088-3548107 | Msa1089940:CDS | 40.0% |
| CAAAAGATCCCACACATGTA+AGG | - | chr7_3:3548138-3548157 | None:intergenic | 40.0% | |
| ! | CTTACATGTGTGGGATCTTT+TGG | + | chr7_3:3548136-3548155 | Msa1089940:CDS | 40.0% |
| ! | AATGTGAGCTTTATGAGCGT+CGG | + | chr7_3:3548259-3548278 | Msa1089940:CDS | 40.0% |
| !! | AAGAAAGCGCTTATGGCTAT+TGG | + | chr7_3:3548298-3548317 | Msa1089940:CDS | 40.0% |
| AACACAAACTCCTCAATAGC+AGG | - | chr7_3:3548373-3548392 | None:intergenic | 40.0% | |
| GCTTGAGAAAAGTGATAGCT+TGG | + | chr7_3:3548521-3548540 | Msa1089940:three_prime_UTR | 40.0% | |
| !! | TCAACTTGAGGTTTGGTGGT+TGG | - | chr7_3:3545048-3545067 | None:intergenic | 45.0% |
| ATCTTGGTCTCCGAGAAACT+CGG | + | chr7_3:3545543-3545562 | Msa1089940:CDS | 45.0% | |
| ! | CAAGTGTTTGAAGCAGGGAA+AGG | + | chr7_3:3545699-3545718 | Msa1089940:CDS | 45.0% |
| ! | TTGTTGGTAGAGCTGGTGTT+GGG | + | chr7_3:3545733-3545752 | Msa1089940:CDS | 45.0% |
| ACTATTGCTGCTGCTGAACA+TGG | + | chr7_3:3545825-3545844 | Msa1089940:CDS | 45.0% | |
| CTATTGCTGCTGCTGAACAT+GGG | + | chr7_3:3545826-3545845 | Msa1089940:CDS | 45.0% | |
| GATTGCTCTTCTTGCTGCTA+TGG | + | chr7_3:3545848-3545867 | Msa1089940:CDS | 45.0% | |
| !! | CATGTACCATACCGGCTTTA+AGG | - | chr7_3:3545902-3545921 | None:intergenic | 45.0% |
| TGGCTGAGGAACAAGTATGT+TGG | + | chr7_3:3546443-3546462 | Msa1089940:CDS | 45.0% | |
| ! | AAGTTGGATCTGAAGTGGCA+AGG | + | chr7_3:3546510-3546529 | Msa1089940:CDS | 45.0% |
| CTCTATCAGCTGGAGCATAA+GGG | - | chr7_3:3546574-3546593 | None:intergenic | 45.0% | |
| CACGAAGTCGCGATTAACAA+TGG | + | chr7_3:3547015-3547034 | Msa1089940:intron | 45.0% | |
| AGCTCTTGATGTGTTCACTG+AGG | + | chr7_3:3547170-3547189 | Msa1089940:CDS | 45.0% | |
| AACTTACTGTCTTTGGCTGG+AGG | - | chr7_3:3547198-3547217 | None:intergenic | 45.0% | |
| GTGATTGCTACTCCTCATCT+TGG | + | chr7_3:3547234-3547253 | Msa1089940:CDS | 45.0% | |
| TTTGACTCAATAGGAGGGTG+TGG | + | chr7_3:3547371-3547390 | Msa1089940:intron | 45.0% | |
| GAAATAGCAGAGGCTGTTGT+TGG | + | chr7_3:3547399-3547418 | Msa1089940:CDS | 45.0% | |
| GCTGTTGTTGGTGCATTGAA+TGG | + | chr7_3:3547411-3547430 | Msa1089940:CDS | 45.0% | |
| AACTGCTGTCAATGCTCCTA+TGG | + | chr7_3:3547446-3547465 | Msa1089940:CDS | 45.0% | |
| TTTACCTCAGGAGCAACCAT+AGG | - | chr7_3:3547465-3547484 | None:intergenic | 45.0% | |
| ATTTCCATGGAGGCTGACTA+TGG | - | chr7_3:3547533-3547552 | None:intergenic | 45.0% | |
| ! | ATTGGCTCCATATGTTGTGC+TGG | + | chr7_3:3547745-3547764 | Msa1089940:CDS | 45.0% |
| TTCTCAGCCAGCACAACATA+TGG | - | chr7_3:3547755-3547774 | None:intergenic | 45.0% | |
| ! | TTAGCTGTGCAGTTGGTATC+CGG | + | chr7_3:3547785-3547804 | Msa1089940:CDS | 45.0% |
| AGATTGGATTCCACTTCCTC+CGG | - | chr7_3:3547807-3547826 | None:intergenic | 45.0% | |
| AAGTCTGGTGTCTAGGTCAT+CGG | - | chr7_3:3547861-3547880 | None:intergenic | 45.0% | |
| CTTCGAGCCATGATCACAAA+AGG | + | chr7_3:3547881-3547900 | Msa1089940:CDS | 45.0% | |
| CATAAGCGAGGAAAGAGTAG+TGG | + | chr7_3:3547979-3547998 | Msa1089940:CDS | 45.0% | |
| ! | ATTGACTCAACAGGTAGCTC+AGG | - | chr7_3:3548016-3548035 | None:intergenic | 45.0% |
| TGCGAATTTGGACTCCACAT+TGG | - | chr7_3:3548053-3548072 | None:intergenic | 45.0% | |
| TACACCACACCTTACATGTG+TGG | + | chr7_3:3548126-3548145 | Msa1089940:CDS | 45.0% | |
| ACACCACACCTTACATGTGT+GGG | + | chr7_3:3548127-3548146 | Msa1089940:CDS | 45.0% | |
| ! | ATGTGTGGGATCTTTTGGTG+TGG | + | chr7_3:3548141-3548160 | Msa1089940:CDS | 45.0% |
| GTGTGGATGTGAGCTTAGAA+GGG | + | chr7_3:3548158-3548177 | Msa1089940:CDS | 45.0% | |
| CCTGGGATGATTGGTAAAGT+CGG | + | chr7_3:3548211-3548230 | Msa1089940:CDS | 45.0% | |
| CGTCGATGAAGAGCCAAATA+AGG | + | chr7_3:3548321-3548340 | Msa1089940:CDS | 45.0% | |
| AATGTGATGCACCAACCAAG+TGG | + | chr7_3:3548780-3548799 | Msa1089940:three_prime_UTR | 45.0% | |
| ATGAGCTAGTTCCACTTGGT+TGG | - | chr7_3:3548794-3548813 | None:intergenic | 45.0% | |
| !! | ACTTGAGGTTTGGTGGTTGG+TGG | - | chr7_3:3545045-3545064 | None:intergenic | 50.0% |
| TTCTCGGAGACCAAGATCGT+TGG | - | chr7_3:3545540-3545559 | None:intergenic | 50.0% | |
| ! | GTTGTTGGTAGAGCTGGTGT+TGG | + | chr7_3:3545732-3545751 | Msa1089940:CDS | 50.0% |
| GCTGATGCTTCCCTTAAAGC+CGG | + | chr7_3:3545888-3545907 | Msa1089940:CDS | 50.0% | |
| TGCTTCCCTTAAAGCCGGTA+TGG | + | chr7_3:3545893-3545912 | Msa1089940:intron | 50.0% | |
| GCAAGGCGTGCAAAAGGATT+AGG | + | chr7_3:3546527-3546546 | Msa1089940:CDS | 50.0% | |
| GCTCTATCAGCTGGAGCATA+AGG | - | chr7_3:3546575-3546594 | None:intergenic | 50.0% | |
| ! | AACCTGTGCTTCTTTGGTGC+TGG | - | chr7_3:3547262-3547281 | None:intergenic | 50.0% |
| AAGACCATAGTCAGCCTCCA+TGG | + | chr7_3:3547526-3547545 | Msa1089940:intron | 50.0% | |
| ! | AGGAAGGTTAGCTGTGCAGT+TGG | + | chr7_3:3547778-3547797 | Msa1089940:CDS | 50.0% |
| AGTCTGGTGTCTAGGTCATC+GGG | - | chr7_3:3547860-3547879 | None:intergenic | 50.0% | |
| CTCGAAGAAGTCTGGTGTCT+AGG | - | chr7_3:3547868-3547887 | None:intergenic | 50.0% | |
| GATCATGGCTCGAAGAAGTC+TGG | - | chr7_3:3547876-3547895 | None:intergenic | 50.0% | |
| AAAAGGCCTTCGCATAAGCG+AGG | + | chr7_3:3547967-3547986 | Msa1089940:CDS | 50.0% | |
| CTCTTTCCTCGCTTATGCGA+AGG | - | chr7_3:3547976-3547995 | None:intergenic | 50.0% | |
| ! | GCAAGTGCTGTATCAGAGAC+TGG | + | chr7_3:3548070-3548089 | Msa1089940:CDS | 50.0% |
| GATCCCACACATGTAAGGTG+TGG | - | chr7_3:3548133-3548152 | None:intergenic | 50.0% | |
| GGTGTGGATGTGAGCTTAGA+AGG | + | chr7_3:3548157-3548176 | Msa1089940:CDS | 50.0% | |
| ACTGATCAGCCTGGGATGAT+TGG | + | chr7_3:3548202-3548221 | Msa1089940:CDS | 50.0% | |
| CCGACTTTACCAATCATCCC+AGG | - | chr7_3:3548214-3548233 | None:intergenic | 50.0% | |
| !! | GCGTAGGAAGAAAGCGCTTA+TGG | + | chr7_3:3548291-3548310 | Msa1089940:CDS | 50.0% |
| !! | TGAGGTTTGGTGGTTGGTGG+AGG | - | chr7_3:3545042-3545061 | None:intergenic | 55.0% |
| TCCGAGAAACTCGGAGAAGC+AGG | + | chr7_3:3545552-3545571 | Msa1089940:CDS | 55.0% | |
| GCCTGCTTCTCCGAGTTTCT+CGG | - | chr7_3:3545556-3545575 | None:intergenic | 55.0% | |
| GAAGTGGCAAGGCGTGCAAA+AGG | + | chr7_3:3546521-3546540 | Msa1089940:CDS | 55.0% | |
| ACAGCACGTGCTCTATCAGC+TGG | - | chr7_3:3546584-3546603 | None:intergenic | 55.0% | |
| GCTGATAGAGCACGTGCTGT+TGG | + | chr7_3:3546584-3546603 | Msa1089940:CDS | 55.0% | |
| !! | TTGGTGCTGGCTCCAAGATG+AGG | - | chr7_3:3547249-3547268 | None:intergenic | 55.0% |
| ! | AGCCAGCACCAAAGAAGCAC+AGG | + | chr7_3:3547257-3547276 | Msa1089940:CDS | 55.0% |
| TGCTCCTATGGTTGCTCCTG+AGG | + | chr7_3:3547458-3547477 | Msa1089940:CDS | 55.0% | |
| !! | GTTGTGCTGGCTGAGAAGCT+AGG | + | chr7_3:3547758-3547777 | Msa1089940:CDS | 55.0% |
| ! | TGCTGGCTGAGAAGCTAGGA+AGG | + | chr7_3:3547762-3547781 | Msa1089940:CDS | 55.0% |
| ! | CAGTTGGTATCCGGAGGAAG+TGG | + | chr7_3:3547794-3547813 | Msa1089940:CDS | 55.0% |
| AAGTGGTTTACCGATCGGCC+AGG | + | chr7_3:3547831-3547850 | Msa1089940:CDS | 55.0% | |
| AGTGGTTTACCGATCGGCCA+GGG | + | chr7_3:3547832-3547851 | Msa1089940:CDS | 55.0% | |
| TGCAGACAGACTGATCAGCC+TGG | + | chr7_3:3548193-3548212 | Msa1089940:CDS | 55.0% | |
| GCAGACAGACTGATCAGCCT+GGG | + | chr7_3:3548194-3548213 | Msa1089940:CDS | 55.0% | |
| TGGAGCTGTGCCTGCTATTG+AGG | + | chr7_3:3548360-3548379 | Msa1089940:CDS | 55.0% | |
| ! | GCTGTGCAGTTGGTATCCGG+AGG | + | chr7_3:3547788-3547807 | Msa1089940:CDS | 60.0% |
| GTGGTTTACCGATCGGCCAG+GGG | + | chr7_3:3547833-3547852 | Msa1089940:CDS | 60.0% | |
| GCGTCGGAAGAACATCGCGT+AGG | + | chr7_3:3548275-3548294 | Msa1089940:CDS | 60.0% | |
| GTCTAGGTCATCGGGACCCC+TGG | - | chr7_3:3547852-3547871 | None:intergenic | 65.0% | |
| CATCGGGACCCCTGGCCGAT+CGG | - | chr7_3:3547844-3547863 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 3545032 | 3548916 | 3545032 | ID=Msa1089940;Name=Msa1089940 |
| chr7_3 | mRNA | 3545032 | 3548916 | 3545032 | ID=Msa1089940-mRNA-1;Parent=Msa1089940;Name=Msa1089940-mRNA-1;_AED=0.03;_eAED=0.03;_QI=247|1|1|1|1|1|5|511|628 |
| chr7_3 | exon | 3545032 | 3545909 | 3545032 | ID=Msa1089940-mRNA-1:exon:1386;Parent=Msa1089940-mRNA-1 |
| chr7_3 | exon | 3546438 | 3546814 | 3546438 | ID=Msa1089940-mRNA-1:exon:1387;Parent=Msa1089940-mRNA-1 |
| chr7_3 | exon | 3547168 | 3547278 | 3547168 | ID=Msa1089940-mRNA-1:exon:1388;Parent=Msa1089940-mRNA-1 |
| chr7_3 | exon | 3547384 | 3547479 | 3547384 | ID=Msa1089940-mRNA-1:exon:1389;Parent=Msa1089940-mRNA-1 |
| chr7_3 | exon | 3547734 | 3548916 | 3547734 | ID=Msa1089940-mRNA-1:exon:1390;Parent=Msa1089940-mRNA-1 |
| chr7_3 | five_prime_UTR | 3545032 | 3545278 | 3545032 | ID=Msa1089940-mRNA-1:five_prime_utr;Parent=Msa1089940-mRNA-1 |
| chr7_3 | CDS | 3545279 | 3545909 | 3545279 | ID=Msa1089940-mRNA-1:cds;Parent=Msa1089940-mRNA-1 |
| chr7_3 | CDS | 3546438 | 3546814 | 3546438 | ID=Msa1089940-mRNA-1:cds;Parent=Msa1089940-mRNA-1 |
| chr7_3 | CDS | 3547168 | 3547278 | 3547168 | ID=Msa1089940-mRNA-1:cds;Parent=Msa1089940-mRNA-1 |
| chr7_3 | CDS | 3547384 | 3547479 | 3547384 | ID=Msa1089940-mRNA-1:cds;Parent=Msa1089940-mRNA-1 |
| chr7_3 | CDS | 3547734 | 3548405 | 3547734 | ID=Msa1089940-mRNA-1:cds;Parent=Msa1089940-mRNA-1 |
| chr7_3 | three_prime_UTR | 3548406 | 3548916 | 3548406 | ID=Msa1089940-mRNA-1:three_prime_utr;Parent=Msa1089940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
