Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0010890 | sp|O04130|SERA2_ARATH | 75.962 | 624 | 137 | 4 | 16 | 628 | 3 | 624 | 0.0 | 957 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010890 | Msa0012080 | 0.800797 | 1.217484e-48 | -8.615850e-47 |
| Msa0010890 | Msa0017510 | 0.803823 | 2.900485e-49 | -8.615850e-47 |
| Msa0010890 | Msa0034270 | 0.822467 | 2.332529e-53 | -8.615850e-47 |
| Msa0010890 | Msa0047030 | 0.802546 | 5.328842e-49 | -8.615850e-47 |
| Msa0010890 | Msa0054480 | 0.840495 | 8.401351e-58 | -8.615850e-47 |
| Msa0010890 | Msa0061380 | 0.804571 | 2.026125e-49 | -8.615850e-47 |
| Msa0010890 | Msa0063890 | 0.822724 | 2.032332e-53 | -8.615850e-47 |
| Msa0010890 | Msa0070700 | 0.814004 | 1.920986e-51 | -8.615850e-47 |
| Msa0010890 | Msa0100090 | 0.801558 | 8.509329e-49 | -8.615850e-47 |
| Msa0010890 | Msa0101440 | 0.823974 | 1.037703e-53 | -8.615850e-47 |
| Msa0010890 | Msa0105070 | 0.801467 | 8.880621e-49 | -8.615850e-47 |
| Msa0010890 | Msa0108410 | 0.804993 | 1.653913e-49 | -8.615850e-47 |
| Msa0010890 | Msa0116770 | 0.807584 | 4.707567e-50 | -8.615850e-47 |
| Msa0010890 | Msa0128120 | 0.800650 | 1.304550e-48 | -8.615850e-47 |
| Msa0010890 | Msa0136070 | 0.806909 | 6.541667e-50 | -8.615850e-47 |
| Msa0010890 | Msa0139060 | 0.802066 | 6.690464e-49 | -8.615850e-47 |
| Msa0010890 | Msa0144370 | 0.801029 | 1.091564e-48 | -8.615850e-47 |
| Msa0010890 | Msa0152430 | 0.814368 | 1.596553e-51 | -8.615850e-47 |
| Msa0010890 | Msa0157290 | 0.803830 | 2.891327e-49 | -8.615850e-47 |
| Msa0010890 | Msa0165210 | 0.804527 | 2.069316e-49 | -8.615850e-47 |
| Msa0010890 | Msa0168500 | 0.807421 | 5.097427e-50 | -8.615850e-47 |
| Msa0010890 | Msa0173660 | 0.807086 | 6.003091e-50 | -8.615850e-47 |
| Msa0010890 | Msa0187120 | 0.819373 | 1.201529e-52 | -8.615850e-47 |
| Msa0010890 | Msa0197660 | 0.832242 | 1.057122e-55 | -8.615850e-47 |
| Msa0010890 | Msa0212310 | 0.801449 | 8.957741e-49 | -8.615850e-47 |
| Msa0010890 | Msa0225100 | 0.811010 | 8.667883e-51 | -8.615850e-47 |
| Msa0010890 | Msa0225460 | 0.812547 | 4.013030e-51 | -8.615850e-47 |
| Msa0010890 | Msa0225680 | 0.818357 | 2.044768e-52 | -8.615850e-47 |
| Msa0010890 | Msa0239800 | 0.825466 | 4.615954e-54 | -8.615850e-47 |
| Msa0010890 | Msa0261340 | 0.807892 | 4.048267e-50 | -8.615850e-47 |
| Msa0010890 | Msa0266180 | 0.810461 | 1.139438e-50 | -8.615850e-47 |
| Msa0010890 | Msa0267370 | 0.804711 | 1.894343e-49 | -8.615850e-47 |
| Msa0010890 | Msa0269810 | 0.813861 | 2.065911e-51 | -8.615850e-47 |
| Msa0010890 | Msa0272660 | 0.809114 | 2.219906e-50 | -8.615850e-47 |
| Msa0010890 | Msa0277820 | 0.809095 | 2.241545e-50 | -8.615850e-47 |
| Msa0010890 | Msa0279700 | 0.832544 | 8.898727e-56 | -8.615850e-47 |
| Msa0010890 | Msa0283910 | 0.808793 | 2.600744e-50 | -8.615850e-47 |
| Msa0010890 | Msa0287740 | 0.814248 | 1.697265e-51 | -8.615850e-47 |
| Msa0010890 | Msa0290720 | 0.800939 | 1.138830e-48 | -8.615850e-47 |
| Msa0010890 | Msa0292030 | 0.800508 | 1.394684e-48 | -8.615850e-47 |
| Msa0010890 | Msa0317510 | 0.826945 | 2.052672e-54 | -8.615850e-47 |
| Msa0010890 | Msa0330340 | 0.800575 | 1.351668e-48 | -8.615850e-47 |
| Msa0010890 | Msa0337620 | 0.805567 | 1.254531e-49 | -8.615850e-47 |
| Msa0010890 | Msa0365780 | 0.818716 | 1.695369e-52 | -8.615850e-47 |
| Msa0010890 | Msa0367870 | 0.824157 | 9.398251e-54 | -8.615850e-47 |
| Msa0010890 | Msa0372340 | 0.802493 | 5.465204e-49 | -8.615850e-47 |
| Msa0010890 | Msa0386090 | 0.840266 | 9.645966e-58 | -8.615850e-47 |
| Msa0010890 | Msa0391320 | 0.815592 | 8.544847e-52 | -8.615850e-47 |
| Msa0010890 | Msa0395860 | 0.814611 | 1.410367e-51 | -8.615850e-47 |
| Msa0010890 | Msa0397750 | 0.807904 | 4.024224e-50 | -8.615850e-47 |
| Msa0010890 | Msa0403640 | 0.813383 | 2.632233e-51 | -8.615850e-47 |
| Msa0010890 | Msa0404190 | 0.826995 | 1.997720e-54 | -8.615850e-47 |
| Msa0010890 | Msa0416650 | 0.812249 | 4.661661e-51 | -8.615850e-47 |
| Msa0010890 | Msa0428080 | 0.838453 | 2.850408e-57 | -8.615850e-47 |
| Msa0010890 | Msa0440400 | 0.817010 | 4.115921e-52 | -8.615850e-47 |
| Msa0010890 | Msa0458720 | 0.800046 | 1.731965e-48 | -8.615850e-47 |
| Msa0010890 | Msa0465410 | 0.848557 | 5.681876e-60 | -8.615850e-47 |
| Msa0010890 | Msa0467490 | 0.801133 | 1.039735e-48 | -8.615850e-47 |
| Msa0010890 | Msa0490730 | -0.801556 | 8.517045e-49 | -8.615850e-47 |
| Msa0010890 | Msa0511270 | 0.846699 | 1.843101e-59 | -8.615850e-47 |
| Msa0010890 | Msa0511370 | 0.814840 | 1.255144e-51 | -8.615850e-47 |
| Msa0010890 | Msa0512750 | 0.809568 | 1.774532e-50 | -8.615850e-47 |
| Msa0010890 | Msa0526070 | -0.804158 | 2.470035e-49 | -8.615850e-47 |
| Msa0010890 | Msa0529890 | 0.823849 | 1.109589e-53 | -8.615850e-47 |
| Msa0010890 | Msa0545210 | 0.810935 | 8.999953e-51 | -8.615850e-47 |
| Msa0010890 | Msa0585560 | 0.820594 | 6.316963e-53 | -8.615850e-47 |
| Msa0010890 | Msa0588870 | 0.825434 | 4.698610e-54 | -8.615850e-47 |
| Msa0010890 | Msa0589280 | 0.813793 | 2.138398e-51 | -8.615850e-47 |
| Msa0010890 | Msa0600700 | 0.805460 | 1.320605e-49 | -8.615850e-47 |
| Msa0010890 | Msa0602690 | 0.811545 | 6.636254e-51 | -8.615850e-47 |
| Msa0010890 | Msa0613440 | 0.806684 | 7.300548e-50 | -8.615850e-47 |
| Msa0010890 | Msa0622170 | -0.804716 | 1.890333e-49 | -8.615850e-47 |
| Msa0010890 | Msa0625190 | 0.952762 | 1.202558e-110 | -8.615850e-47 |
| Msa0010890 | Msa0625720 | 0.824234 | 9.016016e-54 | -8.615850e-47 |
| Msa0010890 | Msa0626510 | 0.804415 | 2.184115e-49 | -8.615850e-47 |
| Msa0010890 | Msa0629510 | 0.804406 | 2.193294e-49 | -8.615850e-47 |
| Msa0010890 | Msa0633700 | 0.830299 | 3.174962e-55 | -8.615850e-47 |
| Msa0010890 | Msa0640860 | 0.801726 | 7.858071e-49 | -8.615850e-47 |
| Msa0010890 | Msa0648310 | 0.807262 | 5.506972e-50 | -8.615850e-47 |
| Msa0010890 | Msa0648860 | 0.803038 | 4.217664e-49 | -8.615850e-47 |
| Msa0010890 | Msa0661650 | 0.864122 | 1.525486e-64 | -8.615850e-47 |
| Msa0010890 | Msa0663390 | 0.805206 | 1.492713e-49 | -8.615850e-47 |
| Msa0010890 | Msa0666650 | 0.836142 | 1.112804e-56 | -8.615850e-47 |
| Msa0010890 | Msa0685900 | 0.805141 | 1.540117e-49 | -8.615850e-47 |
| Msa0010890 | Msa0693380 | 0.801611 | 8.296724e-49 | -8.615850e-47 |
| Msa0010890 | Msa0708310 | 0.808034 | 3.776861e-50 | -8.615850e-47 |
| Msa0010890 | Msa0779320 | 0.812475 | 4.161837e-51 | -8.615850e-47 |
| Msa0010890 | Msa0793800 | 0.805454 | 1.324826e-49 | -8.615850e-47 |
| Msa0010890 | Msa0831530 | 0.804637 | 1.963486e-49 | -8.615850e-47 |
| Msa0010890 | Msa0842650 | 0.807319 | 5.356980e-50 | -8.615850e-47 |
| Msa0010890 | Msa0880140 | 0.800086 | 1.699561e-48 | -8.615850e-47 |
| Msa0010890 | Msa0915770 | 0.823910 | 1.073964e-53 | -8.615850e-47 |
| Msa0010890 | Msa0915800 | 0.819466 | 1.144495e-52 | -8.615850e-47 |
| Msa0010890 | Msa0915830 | 0.816336 | 5.827886e-52 | -8.615850e-47 |
| Msa0010890 | Msa0927310 | 0.800202 | 1.609875e-48 | -8.615850e-47 |
| Msa0010890 | Msa0936060 | 0.812751 | 3.621310e-51 | -8.615850e-47 |
| Msa0010890 | Msa0938480 | 0.827561 | 1.461606e-54 | -8.615850e-47 |
| Msa0010890 | Msa0939250 | 0.804491 | 2.105717e-49 | -8.615850e-47 |
| Msa0010890 | Msa0945110 | 0.800001 | 1.768628e-48 | -8.615850e-47 |
| Msa0010890 | Msa0965610 | 0.804378 | 2.223727e-49 | -8.615850e-47 |
| Msa0010890 | Msa0967870 | 0.808410 | 3.140432e-50 | -8.615850e-47 |
| Msa0010890 | Msa0972960 | 0.803322 | 3.683869e-49 | -8.615850e-47 |
| Msa0010890 | Msa1003620 | 0.804153 | 2.476654e-49 | -8.615850e-47 |
| Msa0010890 | Msa1014540 | 0.802893 | 4.519623e-49 | -8.615850e-47 |
| Msa0010890 | Msa1017430 | 0.800789 | 1.222513e-48 | -8.615850e-47 |
| Msa0010890 | Msa1019000 | 0.828465 | 8.854311e-55 | -8.615850e-47 |
| Msa0010890 | Msa1019150 | 0.840232 | 9.841043e-58 | -8.615850e-47 |
| Msa0010890 | Msa1037780 | 0.848158 | 7.324561e-60 | -8.615850e-47 |
| Msa0010890 | Msa1039710 | -0.800091 | 1.695636e-48 | -8.615850e-47 |
| Msa0010890 | Msa1046460 | 0.801120 | 1.046144e-48 | -8.615850e-47 |
| Msa0010890 | Msa1047080 | 0.803786 | 2.952570e-49 | -8.615850e-47 |
| Msa0010890 | Msa1054990 | 0.821590 | 3.724005e-53 | -8.615850e-47 |
| Msa0010890 | Msa1066670 | 0.819401 | 1.184139e-52 | -8.615850e-47 |
| Msa0010890 | Msa1075540 | 0.806542 | 7.821911e-50 | -8.615850e-47 |
| Msa0010890 | Msa1082500 | 0.803595 | 3.233754e-49 | -8.615850e-47 |
| Msa0010890 | Msa1083840 | 0.814133 | 1.799434e-51 | -8.615850e-47 |
| Msa0010890 | Msa1084960 | 0.807661 | 4.532620e-50 | -8.615850e-47 |
| Msa0010890 | Msa1089940 | 0.999162 | 1.759032e-293 | -8.615850e-47 |
| Msa0010890 | Msa1100050 | 0.825974 | 3.498842e-54 | -8.615850e-47 |
| Msa0010890 | Msa1101710 | 0.800102 | 1.687090e-48 | -8.615850e-47 |
| Msa0010890 | Msa1101720 | 0.800452 | 1.431701e-48 | -8.615850e-47 |
| Msa0010890 | Msa1104090 | 0.823161 | 1.607442e-53 | -8.615850e-47 |
| Msa0010890 | Msa1119940 | 0.803805 | 2.925137e-49 | -8.615850e-47 |
| Msa0010890 | Msa1121490 | 0.808443 | 3.089987e-50 | -8.615850e-47 |
| Msa0010890 | Msa1129550 | 0.824341 | 8.505589e-54 | -8.615850e-47 |
| Msa0010890 | Msa1129730 | 0.824578 | 7.481532e-54 | -8.615850e-47 |
| Msa0010890 | Msa1131050 | 0.846540 | 2.037336e-59 | -8.615850e-47 |
| Msa0010890 | Msa1147740 | 0.846212 | 2.503305e-59 | -8.615850e-47 |
| Msa0010890 | Msa1162780 | 0.808536 | 2.951857e-50 | -8.615850e-47 |
| Msa0010890 | Msa1171710 | 0.834135 | 3.570806e-56 | -8.615850e-47 |
| Msa0010890 | Msa1175180 | 0.817256 | 3.623405e-52 | -8.615850e-47 |
| Msa0010890 | Msa1175440 | 0.800382 | 1.479564e-48 | -8.615850e-47 |
| Msa0010890 | Msa1178180 | 0.813196 | 2.893245e-51 | -8.615850e-47 |
| Msa0010890 | Msa1186950 | -0.833040 | 6.699167e-56 | -8.615850e-47 |
| Msa0010890 | Msa1201200 | 0.806411 | 8.335296e-50 | -8.615850e-47 |
| Msa0010890 | Msa1215050 | 0.802508 | 5.426904e-49 | -8.615850e-47 |
| Msa0010890 | Msa1225700 | 0.822862 | 1.887488e-53 | -8.615850e-47 |
| Msa0010890 | Msa1229500 | 0.801886 | 7.286570e-49 | -8.615850e-47 |
| Msa0010890 | Msa1229600 | 0.819195 | 1.319210e-52 | -8.615850e-47 |
| Msa0010890 | Msa1249490 | 0.810359 | 1.198574e-50 | -8.615850e-47 |
| Msa0010890 | Msa1260320 | 0.808468 | 3.051775e-50 | -8.615850e-47 |
| Msa0010890 | Msa1263790 | 0.812045 | 5.165723e-51 | -8.615850e-47 |
| Msa0010890 | Msa1269480 | 0.814727 | 1.329484e-51 | -8.615850e-47 |
| Msa0010890 | Msa1276530 | 0.837310 | 5.605659e-57 | -8.615850e-47 |
| Msa0010890 | Msa1277150 | 0.816175 | 6.332230e-52 | -8.615850e-47 |
| Msa0010890 | Msa1283860 | 0.804139 | 2.493450e-49 | -8.615850e-47 |
| Msa0010890 | Msa1284680 | 0.808031 | 3.781093e-50 | -8.615850e-47 |
| Msa0010890 | Msa1287440 | 0.809920 | 1.490706e-50 | -8.615850e-47 |
| Msa0010890 | Msa1287460 | 0.809051 | 2.290361e-50 | -8.615850e-47 |
| Msa0010890 | Msa1299960 | 0.809489 | 1.844947e-50 | -8.615850e-47 |
| Msa0010890 | Msa1300970 | 0.807907 | 4.018056e-50 | -8.615850e-47 |
| Msa0010890 | Msa1302830 | 0.803007 | 4.280218e-49 | -8.615850e-47 |
| Msa0010890 | Msa1304890 | -0.813346 | 2.682097e-51 | -8.615850e-47 |
| Msa0010890 | Msa1308620 | 0.811768 | 5.934947e-51 | -8.615850e-47 |
| Msa0010890 | Msa1310210 | 0.811257 | 7.662253e-51 | -8.615850e-47 |
| Msa0010890 | Msa1322890 | 0.802506 | 5.433084e-49 | -8.615850e-47 |
| Msa0010890 | Msa1331000 | 0.803555 | 3.296317e-49 | -8.615850e-47 |
| Msa0010890 | Msa1332000 | 0.807895 | 4.041670e-50 | -8.615850e-47 |
| Msa0010890 | Msa1332070 | 0.826776 | 2.252578e-54 | -8.615850e-47 |
| Msa0010890 | Msa1369550 | 0.819271 | 1.267960e-52 | -8.615850e-47 |
| Msa0010890 | Msa1372760 | 0.803933 | 2.751616e-49 | -8.615850e-47 |
| Msa0010890 | Msa1387870 | 0.818984 | 1.473853e-52 | -8.615850e-47 |
| Msa0010890 | Msa1392240 | 0.845441 | 4.054247e-59 | -8.615850e-47 |
| Msa0010890 | Msa1393410 | 0.814285 | 1.665261e-51 | -8.615850e-47 |
| Msa0010890 | Msa1397740 | 0.805215 | 1.486833e-49 | -8.615850e-47 |
| Msa0010890 | Msa1412540 | 0.814868 | 1.237343e-51 | -8.615850e-47 |
| Msa0010890 | Msa1414520 | 0.994375 | 9.620675e-207 | -8.615850e-47 |
| Msa0010890 | Msa1419370 | 0.821775 | 3.374446e-53 | -8.615850e-47 |
| Msa0010890 | Msa1419960 | 0.802073 | 6.668573e-49 | -8.615850e-47 |
| Msa0010890 | Msa1422420 | 0.816219 | 6.190190e-52 | -8.615850e-47 |
| Msa0010890 | Msa1424750 | 0.808052 | 3.742752e-50 | -8.615850e-47 |
| Msa0010890 | Msa1425090 | 0.848843 | 4.732135e-60 | -8.615850e-47 |
| Msa0010890 | Msa1435160 | 0.991370 | 2.733661e-187 | -8.615850e-47 |
| Msa0010890 | Msa1435420 | 0.814266 | 1.681660e-51 | -8.615850e-47 |
| Msa0010890 | Msa1440560 | 0.863369 | 2.614547e-64 | -8.615850e-47 |
| Msa0010890 | Msa1446950 | 0.818990 | 1.468567e-52 | -8.615850e-47 |
| Msa0010890 | Msa1453320 | 0.842098 | 3.182155e-58 | -8.615850e-47 |
| Msa0010890 | Msa1459100 | 0.844953 | 5.492800e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0010890 | MtrunA17_Chr4g0000511 | 96.530 | 634 | 12 | 3 | 1 | 628 | 1 | 630 | 0.0 | 1225 |
| Msa0010890 | MtrunA17_Chr1g0208141 | 77.939 | 553 | 122 | 0 | 76 | 628 | 45 | 597 | 0.0 | 902 |
| Msa0010890 | MtrunA17_Chr1g0210971 | 34.564 | 298 | 172 | 7 | 115 | 390 | 50 | 346 | 1.96e-32 | 129 |
| Msa0010890 | MtrunA17_Chr3g0077771 | 31.890 | 254 | 153 | 5 | 149 | 385 | 117 | 367 | 2.39e-30 | 123 |
| Msa0010890 | MtrunA17_Chr4g0004721 | 29.412 | 255 | 171 | 4 | 149 | 402 | 68 | 314 | 5.32e-29 | 117 |
| Msa0010890 | MtrunA17_Chr4g0004711 | 29.183 | 257 | 167 | 5 | 150 | 402 | 68 | 313 | 5.94e-28 | 114 |
| Msa0010890 | MtrunA17_Chr4g0004681 | 27.907 | 258 | 172 | 4 | 149 | 406 | 67 | 310 | 8.69e-27 | 111 |
| Msa0010890 | MtrunA17_Chr6g0450811 | 30.081 | 246 | 168 | 3 | 150 | 391 | 122 | 367 | 4.67e-26 | 110 |
| Msa0010890 | MtrunA17_Chr8g0351111 | 29.811 | 265 | 167 | 6 | 150 | 409 | 76 | 326 | 2.73e-23 | 101 |
| Msa0010890 | MtrunA17_Chr4g0004741 | 31.154 | 260 | 164 | 6 | 149 | 406 | 67 | 313 | 4.26e-22 | 97.4 |
| Msa0010890 | MtrunA17_Chr2g0331641 | 29.885 | 261 | 161 | 7 | 150 | 402 | 68 | 314 | 5.14e-20 | 91.3 |
| Msa0010890 | MtrunA17_Chr6g0450821 | 27.347 | 245 | 157 | 4 | 150 | 391 | 92 | 318 | 9.50e-20 | 90.9 |
| Msa0010890 | MtrunA17_Chr8g0351121 | 29.070 | 258 | 168 | 7 | 125 | 376 | 89 | 337 | 3.38e-19 | 89.7 |
| Msa0010890 | MtrunA17_Chr8g0351141 | 25.670 | 261 | 173 | 6 | 150 | 404 | 79 | 324 | 1.01e-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0010890 | AT1G17745.1 | 75.962 | 624 | 137 | 4 | 16 | 628 | 3 | 624 | 0.0 | 957 |
| Msa0010890 | AT1G17745.2 | 72.657 | 651 | 138 | 6 | 16 | 628 | 3 | 651 | 0.0 | 937 |
| Msa0010890 | AT4G34200.1 | 77.034 | 553 | 127 | 0 | 76 | 628 | 51 | 603 | 0.0 | 892 |
| Msa0010890 | AT3G19480.1 | 76.427 | 543 | 128 | 0 | 86 | 628 | 46 | 588 | 0.0 | 869 |
| Msa0010890 | AT1G68010.1 | 34.564 | 298 | 172 | 7 | 115 | 390 | 50 | 346 | 1.14e-31 | 127 |
| Msa0010890 | AT1G68010.3 | 34.737 | 285 | 163 | 7 | 115 | 377 | 50 | 333 | 7.14e-31 | 124 |
| Msa0010890 | AT1G68010.2 | 34.783 | 299 | 171 | 8 | 115 | 390 | 50 | 347 | 3.54e-30 | 123 |
| Msa0010890 | AT1G79870.1 | 30.980 | 255 | 165 | 6 | 150 | 402 | 68 | 313 | 1.87e-27 | 113 |
| Msa0010890 | AT5G14780.2 | 31.532 | 222 | 148 | 3 | 156 | 373 | 112 | 333 | 4.10e-27 | 114 |
| Msa0010890 | AT5G14780.3 | 31.532 | 222 | 148 | 3 | 156 | 373 | 100 | 321 | 4.53e-27 | 113 |
| Msa0010890 | AT5G14780.1 | 31.532 | 222 | 148 | 3 | 156 | 373 | 126 | 347 | 9.70e-27 | 113 |
| Msa0010890 | AT1G12550.1 | 29.352 | 293 | 186 | 8 | 117 | 404 | 43 | 319 | 1.34e-26 | 111 |
| Msa0010890 | AT1G72190.1 | 30.380 | 237 | 154 | 4 | 150 | 377 | 116 | 350 | 3.50e-26 | 111 |
| Msa0010890 | AT2G45630.2 | 28.179 | 291 | 193 | 8 | 117 | 404 | 59 | 336 | 2.69e-22 | 99.0 |
| Msa0010890 | AT1G79870.2 | 29.528 | 254 | 151 | 6 | 150 | 402 | 68 | 294 | 6.83e-22 | 97.1 |
Find 162 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAACTCCTTAATTATTAT+TGG | 0.149075 | 1_1:+16454001 | Msa0010890:five_prime_UTR |
| TTCTCAAGAGCTTCCTTATT+TGG | 0.155413 | 1_1:-16457243 | None:intergenic |
| TGATACAGCACTTGCGAATT+TGG | 0.169233 | 1_1:-16456971 | None:intergenic |
| CTACAAGCTGCTACTGAATT+TGG | 0.182846 | 1_1:+16454680 | Msa0010890:CDS |
| AAAACAAACCTGTGCTTCTT+TGG | 0.221839 | 1_1:-16456174 | None:intergenic |
| TTCCTTAACTCCAACACTTT+TGG | 0.245786 | 1_1:+16454275 | Msa0010890:CDS |
| TGGGAAAACATTAGCAATAA+TGG | 0.251279 | 1_1:+16455387 | Msa0010890:CDS |
| CATTAAACATAGTAGATTAT+AGG | 0.252693 | 1_1:-16457779 | None:intergenic |
| CTTACATGTGTGGGATCTTT+TGG | 0.261096 | 1_1:+16457045 | Msa0010890:CDS |
| CCACATTGGATATTTGTATC+TGG | 0.271958 | 1_1:-16456945 | None:intergenic |
| CATGTACCATACCGGCTTTA+AGG | 0.285448 | 1_1:-16454808 | None:intergenic |
| ATCTTCTTGCATAGGTCTTC+TGG | 0.285848 | 1_1:-16454536 | None:intergenic |
| TTGCACTAACTTACTGTCTT+TGG | 0.289295 | 1_1:-16456111 | None:intergenic |
| TATTGGTTTCTGTTATATAT+AGG | 0.300629 | 1_1:+16454018 | Msa0010890:five_prime_UTR |
| ACATTAGCAATAATGGGATT+TGG | 0.308937 | 1_1:+16455394 | Msa0010890:CDS |
| ACAGAAACCAATAATAATTA+AGG | 0.311830 | 1_1:-16454008 | None:intergenic |
| ATGAGAGAGTTTAATGTTGT+TGG | 0.329026 | 1_1:-16454306 | None:intergenic |
| CATTTGTATTCATCCTTTGA+TGG | 0.330887 | 1_1:+16457748 | Msa0010890:three_prime_UTR |
| AAGGAAGCTCTTGAGAATAT+TGG | 0.341193 | 1_1:+16457249 | Msa0010890:CDS |
| GGTAAAGTCGGAAACATATT+AGG | 0.343317 | 1_1:+16457132 | Msa0010890:CDS |
| TCACCAGGTATTATCAGAAT+TGG | 0.344756 | 1_1:+16456636 | Msa0010890:intron |
| GGGAAAACATTAGCAATAAT+GGG | 0.345954 | 1_1:+16455388 | Msa0010890:CDS |
| TTGACAATTGTGTTTGATAT+TGG | 0.351660 | 1_1:-16456823 | None:intergenic |
| TTCCAAAAGTGTTGGAGTTA+AGG | 0.352126 | 1_1:-16454277 | None:intergenic |
| GCGTAGGAAGAAAGCGCTTA+TGG | 0.355828 | 1_1:+16457200 | Msa0010890:CDS |
| GTTAAGGAATGAGAGATTAG+AGG | 0.361871 | 1_1:-16454261 | None:intergenic |
| TTGAAAACTTTGTTAGTAGT+TGG | 0.364330 | 1_1:-16455586 | None:intergenic |
| GCCTGCTTCTCCGAGTTTCT+CGG | 0.380012 | 1_1:-16454462 | None:intergenic |
| CGTCGATGAAGAGCCAAATA+AGG | 0.383184 | 1_1:+16457230 | Msa0010890:CDS |
| AGATAGAAGAAAAGGTTTAG+AGG | 0.383296 | 1_1:-16454104 | None:intergenic |
| GCTCTATCAGCTGGAGCATA+AGG | 0.392374 | 1_1:-16455481 | None:intergenic |
| TGAGGTTTGGTGGTTGGTGG+AGG | 0.397943 | 1_1:-16453948 | None:intergenic |
| ATGTACCATACCGGCTTTAA+GGG | 0.400835 | 1_1:-16454807 | None:intergenic |
| TTCTTCAACTTGAGGTTTGG+TGG | 0.402779 | 1_1:-16453958 | None:intergenic |
| GGTGTGGATGTGAGCTTAGA+AGG | 0.404203 | 1_1:+16457066 | Msa0010890:CDS |
| AAAGGAAAGTTGAAAGTTGT+TGG | 0.405100 | 1_1:+16454626 | Msa0010890:CDS |
| GTCTAGGTCATCGGGACCCC+TGG | 0.409158 | 1_1:-16456758 | None:intergenic |
| GATTACATCGCAAAGCAAAA+AGG | 0.410558 | 1_1:+16456859 | Msa0010890:CDS |
| CAAGTATGTTGGAGTGTCTA+TGG | 0.411120 | 1_1:+16455363 | Msa0010890:CDS |
| AAGTAATACTATATATATAT+AGG | 0.415410 | 1_1:+16457360 | Msa0010890:three_prime_UTR |
| ATAATGGGATTTGGAAAAGT+TGG | 0.416575 | 1_1:+16455403 | Msa0010890:CDS |
| ACTGATCAGCCTGGGATGAT+TGG | 0.420709 | 1_1:+16457111 | Msa0010890:CDS |
| TTAGTCAAAGCTCTTGATAG+TGG | 0.425387 | 1_1:+16455688 | Msa0010890:CDS |
| GATAGAAGAAAAGGTTTAGA+GGG | 0.425599 | 1_1:-16454103 | None:intergenic |
| ACTTGAGGTTTGGTGGTTGG+TGG | 0.427268 | 1_1:-16453951 | None:intergenic |
| AACCTGTGCTTCTTTGGTGC+TGG | 0.432833 | 1_1:-16456168 | None:intergenic |
| TTGGTTTCAGAAGAGAAGAT+AGG | 0.433144 | 1_1:-16454227 | None:intergenic |
| GCAAGGCGTGCAAAAGGATT+AGG | 0.435231 | 1_1:+16455436 | Msa0010890:CDS |
| TTCAATATAGATAGAAGAAA+AGG | 0.437478 | 1_1:-16454112 | None:intergenic |
| GATTGCTCTTCTTGCTGCTA+TGG | 0.439120 | 1_1:+16454757 | Msa0010890:CDS |
| CGATGTAATCAGCATTTACA+AGG | 0.440577 | 1_1:-16456846 | None:intergenic |
| ATTGACGGAAAAGTGAAGTA+TGG | 0.441680 | 1_1:+16457012 | Msa0010890:CDS |
| AACAACAGAAACAACGTTGT+TGG | 0.441735 | 1_1:-16454405 | None:intergenic |
| AAGAAAGCGCTTATGGCTAT+TGG | 0.442305 | 1_1:+16457207 | Msa0010890:CDS |
| GCAATTATTTGAAAGGGAAA+AGG | 0.449772 | 1_1:+16457652 | Msa0010890:three_prime_UTR |
| GTGATTGCTACTCCTCATCT+TGG | 0.451139 | 1_1:+16456143 | Msa0010890:CDS |
| TCCGAGAAACTCGGAGAAGC+AGG | 0.463753 | 1_1:+16454461 | Msa0010890:CDS |
| TTCTCAGCCAGCACAACATA+TGG | 0.465579 | 1_1:-16456661 | None:intergenic |
| TCAACTTGAGGTTTGGTGGT+TGG | 0.467039 | 1_1:-16453954 | None:intergenic |
| ACTAGTGCAATTATTTGAAA+GGG | 0.469056 | 1_1:+16457646 | Msa0010890:three_prime_UTR |
| ATATATATATAGGTATTGAT+TGG | 0.470124 | 1_1:+16457370 | Msa0010890:three_prime_UTR |
| CATCAAAGGATGAATACAAA+TGG | 0.471148 | 1_1:-16457747 | None:intergenic |
| TGGAGCTGTGCCTGCTATTG+AGG | 0.472247 | 1_1:+16457269 | Msa0010890:CDS |
| TATGGCTCGTAATGTTTCTC+AGG | 0.473207 | 1_1:+16454775 | Msa0010890:CDS |
| GAAGAAAAGGTTTAGAGGGA+AGG | 0.473708 | 1_1:-16454099 | None:intergenic |
| AACTAGTGCAATTATTTGAA+AGG | 0.474444 | 1_1:+16457645 | Msa0010890:three_prime_UTR |
| GCTTGAGAAAAGTGATAGCT+TGG | 0.477598 | 1_1:+16457430 | Msa0010890:three_prime_UTR |
| TGTATCTGGATTGACTCAAC+AGG | 0.483012 | 1_1:-16456931 | None:intergenic |
| TTAGCTGTGCAGTTGGTATC+CGG | 0.483277 | 1_1:+16456694 | Msa0010890:CDS |
| AGATTGGATTCCACTTCCTC+CGG | 0.486443 | 1_1:-16456713 | None:intergenic |
| GAAGTGGCAAGGCGTGCAAA+AGG | 0.492552 | 1_1:+16455430 | Msa0010890:CDS |
| AACTGCTGTCAATGCTCCTA+TGG | 0.495186 | 1_1:+16456355 | Msa0010890:CDS |
| AGTGGTTTACCGATCGGCCA+GGG | 0.499241 | 1_1:+16456741 | Msa0010890:CDS |
| AAGAAAAGGTTTAGAGGGAA+GGG | 0.500168 | 1_1:-16454098 | None:intergenic |
| ATGAGCTAGTTCCACTTGGT+TGG | 0.500510 | 1_1:-16457700 | None:intergenic |
| ACTAACTTACTGTCTTTGGC+TGG | 0.501929 | 1_1:-16456107 | None:intergenic |
| TTGAAAGTTGTTGGTAGAGC+TGG | 0.503758 | 1_1:+16454635 | Msa0010890:CDS |
| GCTGTTGTTGGTGCATTGAA+TGG | 0.504053 | 1_1:+16456320 | Msa0010890:CDS |
| GAAATAGCAGAGGCTGTTGT+TGG | 0.504211 | 1_1:+16456308 | Msa0010890:CDS |
| ACAAGACAAGTGTTTGAAGC+AGG | 0.504544 | 1_1:+16454602 | Msa0010890:CDS |
| TGATAGTGGAATTGTTGCTC+AGG | 0.505410 | 1_1:+16455702 | Msa0010890:CDS |
| TGCTCCTATGGTTGCTCCTG+AGG | 0.505857 | 1_1:+16456367 | Msa0010890:CDS |
| ATTGGCTCCATATGTTGTGC+TGG | 0.505952 | 1_1:+16456654 | Msa0010890:CDS |
| AATTGAGTTGGTACAAGAAG+AGG | 0.507359 | 1_1:-16454195 | None:intergenic |
| ACTATTGCTGCTGCTGAACA+TGG | 0.507722 | 1_1:+16454734 | Msa0010890:CDS |
| CAAAAGATCCCACACATGTA+AGG | 0.508676 | 1_1:-16457044 | None:intergenic |
| AAGTCTGGTGTCTAGGTCAT+CGG | 0.511273 | 1_1:-16456767 | None:intergenic |
| AAGTGGTTTACCGATCGGCC+AGG | 0.511493 | 1_1:+16456740 | Msa0010890:CDS |
| CTTCGAGCCATGATCACAAA+AGG | 0.512301 | 1_1:+16456790 | Msa0010890:CDS |
| CAGTTGGTATCCGGAGGAAG+TGG | 0.513484 | 1_1:+16456703 | Msa0010890:CDS |
| CTCGAAGAAGTCTGGTGTCT+AGG | 0.515153 | 1_1:-16456774 | None:intergenic |
| GATCATGGCTCGAAGAAGTC+TGG | 0.515479 | 1_1:-16456782 | None:intergenic |
| AGTCTGGTGTCTAGGTCATC+GGG | 0.515480 | 1_1:-16456766 | None:intergenic |
| TTTAAGACAATTAGGACATG+TGG | 0.518255 | 1_1:+16454493 | Msa0010890:CDS |
| TGCGAATTTGGACTCCACAT+TGG | 0.521056 | 1_1:-16456959 | None:intergenic |
| CTCTATCAGCTGGAGCATAA+GGG | 0.521140 | 1_1:-16455480 | None:intergenic |
| CTCTTTCCTCGCTTATGCGA+AGG | 0.522585 | 1_1:-16456882 | None:intergenic |
| ATTGACTCAACAGGTAGCTC+AGG | 0.525036 | 1_1:-16456922 | None:intergenic |
| TGCAGACAGACTGATCAGCC+TGG | 0.528856 | 1_1:+16457102 | Msa0010890:CDS |
| AACACAAACTCCTCAATAGC+AGG | 0.528948 | 1_1:-16457279 | None:intergenic |
| TTGGTGCTGGCTCCAAGATG+AGG | 0.530869 | 1_1:-16456155 | None:intergenic |
| TGGAATCCAATCTGTAAAAG+TGG | 0.532831 | 1_1:+16456723 | Msa0010890:CDS |
| TTGTTGGTAGAGCTGGTGTT+GGG | 0.537332 | 1_1:+16454642 | Msa0010890:CDS |
| TTTGACTCAATAGGAGGGTG+TGG | 0.537514 | 1_1:+16456280 | Msa0010890:intron |
| AACTTACTGTCTTTGGCTGG+AGG | 0.538388 | 1_1:-16456104 | None:intergenic |
| TTGTTAGTAGTTGGAGTGAG+AGG | 0.541743 | 1_1:-16455577 | None:intergenic |
| TCAGAAGAGAAGATAGGTGA+AGG | 0.543290 | 1_1:-16454221 | None:intergenic |
| ACAGCACGTGCTCTATCAGC+TGG | 0.543522 | 1_1:-16455490 | None:intergenic |
| TGGAAAAGTTGGATCTGAAG+TGG | 0.544222 | 1_1:+16455414 | Msa0010890:CDS |
| AGCCAGCACCAAAGAAGCAC+AGG | 0.545917 | 1_1:+16456166 | Msa0010890:CDS |
| TTTACCTCAGGAGCAACCAT+AGG | 0.548169 | 1_1:-16456371 | None:intergenic |
| GCAAGTGCTGTATCAGAGAC+TGG | 0.549715 | 1_1:+16456979 | Msa0010890:CDS |
| TTCTCGGAGACCAAGATCGT+TGG | 0.552120 | 1_1:-16454446 | None:intergenic |
| ATAGGTAAATAAACCATCAA+AGG | 0.554944 | 1_1:-16457761 | None:intergenic |
| TTATATGAGCTAGTTCCACT+TGG | 0.556440 | 1_1:-16457704 | None:intergenic |
| CATCGGGACCCCTGGCCGAT+CGG | 0.557463 | 1_1:-16456750 | None:intergenic |
| GTTGTTGGTAGAGCTGGTGT+TGG | 0.558071 | 1_1:+16454641 | Msa0010890:CDS |
| GTGTGGATGTGAGCTTAGAA+GGG | 0.562427 | 1_1:+16457067 | Msa0010890:CDS |
| CCGACTTTACCAATCATCCC+AGG | 0.564497 | 1_1:-16457120 | None:intergenic |
| TGCTGGCTGAGAAGCTAGGA+AGG | 0.566544 | 1_1:+16456671 | Msa0010890:CDS |
| GCTGATAGAGCACGTGCTGT+TGG | 0.568204 | 1_1:+16455493 | Msa0010890:CDS |
| ATCTTGGTCTCCGAGAAACT+CGG | 0.570682 | 1_1:+16454452 | Msa0010890:CDS |
| ATGTTGGAGTGTCTATGGTT+GGG | 0.571426 | 1_1:+16455368 | Msa0010890:CDS |
| GGTAATGATTCCAAAAGTGT+TGG | 0.574616 | 1_1:-16454285 | None:intergenic |
| AGGAAGGTTAGCTGTGCAGT+TGG | 0.575316 | 1_1:+16456687 | Msa0010890:CDS |
| CATGATACAAAACTTAGTAC+AGG | 0.575904 | 1_1:-16457521 | None:intergenic |
| TGGCTGAGGAACAAGTATGT+TGG | 0.577015 | 1_1:+16455352 | Msa0010890:CDS |
| AGCTTGAGATCTTCTTGCAT+AGG | 0.577862 | 1_1:-16454544 | None:intergenic |
| ACTGGTCAGATAAGCATTGA+CGG | 0.579892 | 1_1:+16456997 | Msa0010890:CDS |
| CAAGTGTTTGAAGCAGGGAA+AGG | 0.581477 | 1_1:+16454608 | Msa0010890:CDS |
| ATCATCAATGTTGCTAGAGG+TGG | 0.581813 | 1_1:+16455646 | Msa0010890:CDS |
| AGGTGAAGGAAGAATTGAGT+TGG | 0.583715 | 1_1:-16454207 | None:intergenic |
| TATGTTGGAGTGTCTATGGT+TGG | 0.584348 | 1_1:+16455367 | Msa0010890:CDS |
| TGTAAAAGTGGTTTACCGAT+CGG | 0.589128 | 1_1:+16456735 | Msa0010890:CDS |
| GCTGATGCTTCCCTTAAAGC+CGG | 0.593057 | 1_1:+16454797 | Msa0010890:CDS |
| CCTGGGATGATTGGTAAAGT+CGG | 0.595667 | 1_1:+16457120 | Msa0010890:CDS |
| ATAGCTTGGTTATGAAGTAA+TGG | 0.595931 | 1_1:+16457444 | Msa0010890:three_prime_UTR |
| GCAGCAATAGTATTAGCAGT+AGG | 0.600020 | 1_1:-16454722 | None:intergenic |
| ACACCACACCTTACATGTGT+GGG | 0.601870 | 1_1:+16457036 | Msa0010890:CDS |
| TTATTTGAAAGGGAAAAGGT+AGG | 0.602025 | 1_1:+16457656 | Msa0010890:three_prime_UTR |
| TACACCACACCTTACATGTG+TGG | 0.602905 | 1_1:+16457035 | Msa0010890:CDS |
| CTATTGCTGCTGCTGAACAT+GGG | 0.618691 | 1_1:+16454735 | Msa0010890:CDS |
| CAAGACAAGTGTTTGAAGCA+GGG | 0.623927 | 1_1:+16454603 | Msa0010890:CDS |
| TGGTGTTGGGATTGATAATG+TGG | 0.634025 | 1_1:+16454655 | Msa0010890:CDS |
| GTTGTGCTGGCTGAGAAGCT+AGG | 0.640220 | 1_1:+16456667 | Msa0010890:CDS |
| AATGTGATGCACCAACCAAG+TGG | 0.640895 | 1_1:+16457689 | Msa0010890:three_prime_UTR |
| CATAAGCGAGGAAAGAGTAG+TGG | 0.646950 | 1_1:+16456888 | Msa0010890:CDS |
| AAGTTGGATCTGAAGTGGCA+AGG | 0.647081 | 1_1:+16455419 | Msa0010890:CDS |
| CCAGATACAAATATCCAATG+TGG | 0.650082 | 1_1:+16456945 | Msa0010890:CDS |
| GCAGACAGACTGATCAGCCT+GGG | 0.652171 | 1_1:+16457103 | Msa0010890:CDS |
| GTGGTTTACCGATCGGCCAG+GGG | 0.652751 | 1_1:+16456742 | Msa0010890:CDS |
| AAAAGGCCTTCGCATAAGCG+AGG | 0.668434 | 1_1:+16456876 | Msa0010890:CDS |
| GATCCCACACATGTAAGGTG+TGG | 0.673309 | 1_1:-16457039 | None:intergenic |
| ATAATTAAGGAGTTGATGTG+CGG | 0.675532 | 1_1:-16453995 | None:intergenic |
| GCGTCGGAAGAACATCGCGT+AGG | 0.678508 | 1_1:+16457184 | Msa0010890:CDS |
| AATGTGAGCTTTATGAGCGT+CGG | 0.682198 | 1_1:+16457168 | Msa0010890:CDS |
| GCTGTGCAGTTGGTATCCGG+AGG | 0.685286 | 1_1:+16456697 | Msa0010890:CDS |
| TGTGGCTATTGAAATAGCAG+AGG | 0.685958 | 1_1:+16456298 | Msa0010890:CDS |
| AGAATCATCAATGTTGCTAG+AGG | 0.702837 | 1_1:+16455643 | Msa0010890:CDS |
| GATGCTTTGATTGTGAGAAG+CGG | 0.715751 | 1_1:+16454569 | Msa0010890:CDS |
| AGCTCTTGATGTGTTCACTG+AGG | 0.735803 | 1_1:+16456079 | Msa0010890:CDS |
| GTGAAGTGAGATGAAATCAG+CGG | 0.758782 | 1_1:-16455551 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAATACTATATATATAT+AGG | + | chr1_1:16457360-16457379 | Msa0010890:three_prime_UTR | 10.0% |
| !! | ATATAGTTTAATAGTATTAG+TGG | + | chr1_1:16454891-16454910 | Msa0010890:intron | 15.0% |
| !!! | AGGTTAGTTTTTAATTTATA+CGG | + | chr1_1:16454963-16454982 | Msa0010890:intron | 15.0% |
| !!! | TCTTGTTTGAAATATATTTA+AGG | + | chr1_1:16455129-16455148 | Msa0010890:intron | 15.0% |
| !!! | ATATATATATAGGTATTGAT+TGG | + | chr1_1:16457370-16457389 | Msa0010890:three_prime_UTR | 15.0% |
| !! | ATCAACTCCTTAATTATTAT+TGG | + | chr1_1:16454001-16454020 | Msa0010890:five_prime_UTR | 20.0% |
| !! | ACAGAAACCAATAATAATTA+AGG | - | chr1_1:16454011-16454030 | None:intergenic | 20.0% |
| !!! | TATTGGTTTCTGTTATATAT+AGG | + | chr1_1:16454018-16454037 | Msa0010890:five_prime_UTR | 20.0% |
| !!! | AAATTTTGAATTGTGATTTG+AGG | - | chr1_1:16454064-16454083 | None:intergenic | 20.0% |
| !! | TTCAATATAGATAGAAGAAA+AGG | - | chr1_1:16454115-16454134 | None:intergenic | 20.0% |
| !!! | TTACAAGTTTTAAGACAATT+AGG | + | chr1_1:16454485-16454504 | Msa0010890:CDS | 20.0% |
| !!! | TACACAAAAAGTACATTTTT+AGG | + | chr1_1:16455213-16455232 | Msa0010890:intron | 20.0% |
| !! | TGTAAAAACACACATATTAT+AGG | - | chr1_1:16455278-16455297 | None:intergenic | 20.0% |
| !! | GATAGTATAATAGTAATTCA+AGG | - | chr1_1:16455756-16455775 | None:intergenic | 20.0% |
| !! | AAATAGTAAATGGTAATTCA+AGG | - | chr1_1:16455846-16455865 | None:intergenic | 20.0% |
| !!! | TGAATTACCATTTACTATTT+TGG | + | chr1_1:16455846-16455865 | Msa0010890:intron | 20.0% |
| !!! | AAATAGAAATGTCATTTGAA+TGG | - | chr1_1:16456039-16456058 | None:intergenic | 20.0% |
| !!! | ATTTCTATTTTGTTTGAATG+TGG | + | chr1_1:16456049-16456068 | Msa0010890:intron | 20.0% |
| !! | AATTGATGAGAAAAAAAACT+TGG | - | chr1_1:16456261-16456280 | None:intergenic | 20.0% |
| !! | CATTAAACATAGTAGATTAT+AGG | - | chr1_1:16457782-16457801 | None:intergenic | 20.0% |
| !!! | ATTAGAGGATTTTGAAGATT+TGG | - | chr1_1:16454249-16454268 | None:intergenic | 25.0% |
| !!! | TTTGAGTTGTTTGTTTTGTT+TGG | - | chr1_1:16454385-16454404 | None:intergenic | 25.0% |
| ! | TAACGACAAATGTTAGTAAT+TGG | + | chr1_1:16454935-16454954 | Msa0010890:intron | 25.0% |
| ! | AATGTTAGTAATTGGTTGTT+AGG | + | chr1_1:16454943-16454962 | Msa0010890:intron | 25.0% |
| !!! | CAAAGTTTTAAATTGCAGTT+GGG | + | chr1_1:16455076-16455095 | Msa0010890:intron | 25.0% |
| !! | TGATAATTTTTGCAGGAAAA+TGG | + | chr1_1:16455332-16455351 | Msa0010890:intron | 25.0% |
| ! | TTGAAAACTTTGTTAGTAGT+TGG | - | chr1_1:16455589-16455608 | None:intergenic | 25.0% |
| ! | AACATGTTAATTGAAGTAAG+AGG | - | chr1_1:16455733-16455752 | None:intergenic | 25.0% |
| ! | GAAAATTATGTGAGCTAAAA+GGG | - | chr1_1:16456235-16456254 | None:intergenic | 25.0% |
| ! | AGAAAATTATGTGAGCTAAA+AGG | - | chr1_1:16456236-16456255 | None:intergenic | 25.0% |
| !! | AAAGCATAGTTTAATTTCCA+TGG | - | chr1_1:16456455-16456474 | None:intergenic | 25.0% |
| ! | ATGGAAATTAAACTATGCTT+TGG | + | chr1_1:16456454-16456473 | Msa0010890:intron | 25.0% |
| ! | TGGAAATTAAACTATGCTTT+GGG | + | chr1_1:16456455-16456474 | Msa0010890:intron | 25.0% |
| !! | ATTAGAACTAGTTTAGACAT+AGG | + | chr1_1:16456522-16456541 | Msa0010890:intron | 25.0% |
| ! | TTGACAATTGTGTTTGATAT+TGG | - | chr1_1:16456826-16456845 | None:intergenic | 25.0% |
| ! | AACTAGTGCAATTATTTGAA+AGG | + | chr1_1:16457645-16457664 | Msa0010890:three_prime_UTR | 25.0% |
| ! | ACTAGTGCAATTATTTGAAA+GGG | + | chr1_1:16457646-16457665 | Msa0010890:three_prime_UTR | 25.0% |
| ! | ATAGGTAAATAAACCATCAA+AGG | - | chr1_1:16457764-16457783 | None:intergenic | 25.0% |
| ! | TTTTTCTTCAACTTGAGGTT+TGG | - | chr1_1:16453964-16453983 | None:intergenic | 30.0% |
| ! | AGAGATTTTTCTTCAACTTG+AGG | - | chr1_1:16453969-16453988 | None:intergenic | 30.0% |
| !! | ATAATTAAGGAGTTGATGTG+CGG | - | chr1_1:16453998-16454017 | None:intergenic | 30.0% |
| GATAGAAGAAAAGGTTTAGA+GGG | - | chr1_1:16454106-16454125 | None:intergenic | 30.0% | |
| AGATAGAAGAAAAGGTTTAG+AGG | - | chr1_1:16454107-16454126 | None:intergenic | 30.0% | |
| ATGAGAGAGTTTAATGTTGT+TGG | - | chr1_1:16454309-16454328 | None:intergenic | 30.0% | |
| !!! | TGTTTGTTTTGTTTGGTCAA+CGG | - | chr1_1:16454378-16454397 | None:intergenic | 30.0% |
| AAATGAAAAACCAACGATCT+TGG | + | chr1_1:16454436-16454455 | Msa0010890:CDS | 30.0% | |
| ! | TTTAAGACAATTAGGACATG+TGG | + | chr1_1:16454493-16454512 | Msa0010890:CDS | 30.0% |
| AAAGGAAAGTTGAAAGTTGT+TGG | + | chr1_1:16454626-16454645 | Msa0010890:CDS | 30.0% | |
| ! | CCAACTGCAATTTAAAACTT+TGG | - | chr1_1:16455078-16455097 | None:intergenic | 30.0% |
| !!! | CCAAAGTTTTAAATTGCAGT+TGG | + | chr1_1:16455075-16455094 | Msa0010890:intron | 30.0% |
| ! | ACTACTATGAGTATTTGTTG+AGG | + | chr1_1:16455297-16455316 | Msa0010890:intron | 30.0% |
| !!! | GAGATGTTGATAATTTTTGC+AGG | + | chr1_1:16455325-16455344 | Msa0010890:intron | 30.0% |
| TGGGAAAACATTAGCAATAA+TGG | + | chr1_1:16455387-16455406 | Msa0010890:CDS | 30.0% | |
| GGGAAAACATTAGCAATAAT+GGG | + | chr1_1:16455388-16455407 | Msa0010890:CDS | 30.0% | |
| ! | ACATTAGCAATAATGGGATT+TGG | + | chr1_1:16455394-16455413 | Msa0010890:CDS | 30.0% |
| ! | ATAATGGGATTTGGAAAAGT+TGG | + | chr1_1:16455403-16455422 | Msa0010890:CDS | 30.0% |
| ! | TACTTTTGCTAAGATGAAGA+AGG | + | chr1_1:16455615-16455634 | Msa0010890:CDS | 30.0% |
| ! | ACTTTTGCTAAGATGAAGAA+GGG | + | chr1_1:16455616-16455635 | Msa0010890:CDS | 30.0% |
| TCAAGGAACATGTAAACTAT+AGG | - | chr1_1:16455829-16455848 | None:intergenic | 30.0% | |
| GCGATTTCCAAAATAGTAAA+TGG | - | chr1_1:16455856-16455875 | None:intergenic | 30.0% | |
| GAAGAAGAAAAAATGCAAGT+AGG | - | chr1_1:16456210-16456229 | None:intergenic | 30.0% | |
| !!! | CTCATCAATTTTGACTCAAT+AGG | + | chr1_1:16456271-16456290 | Msa0010890:intron | 30.0% |
| !!! | ATCAATTTTGACTCAATAGG+AGG | + | chr1_1:16456274-16456293 | Msa0010890:intron | 30.0% |
| !!! | TCAATTTTGACTCAATAGGA+GGG | + | chr1_1:16456275-16456294 | Msa0010890:intron | 30.0% |
| AGCATACTAATGTTACAATG+TGG | - | chr1_1:16456404-16456423 | None:intergenic | 30.0% | |
| AAGCAAAAAAAGAACAATGC+AGG | - | chr1_1:16456584-16456603 | None:intergenic | 30.0% | |
| TAATTGTTTGCAATTTCACC+AGG | + | chr1_1:16456621-16456640 | Msa0010890:intron | 30.0% | |
| ! | AATAATGCCTTTTGTGATCA+TGG | - | chr1_1:16456800-16456819 | None:intergenic | 30.0% |
| ATAGCTTGGTTATGAAGTAA+TGG | + | chr1_1:16457444-16457463 | Msa0010890:three_prime_UTR | 30.0% | |
| CATGATACAAAACTTAGTAC+AGG | - | chr1_1:16457524-16457543 | None:intergenic | 30.0% | |
| !! | CTGTACTAAGTTTTGTATCA+TGG | + | chr1_1:16457522-16457541 | Msa0010890:three_prime_UTR | 30.0% |
| GCAATTATTTGAAAGGGAAA+AGG | + | chr1_1:16457652-16457671 | Msa0010890:three_prime_UTR | 30.0% | |
| TTATTTGAAAGGGAAAAGGT+AGG | + | chr1_1:16457656-16457675 | Msa0010890:three_prime_UTR | 30.0% | |
| CATCAAAGGATGAATACAAA+TGG | - | chr1_1:16457750-16457769 | None:intergenic | 30.0% | |
| CATTTGTATTCATCCTTTGA+TGG | + | chr1_1:16457748-16457767 | Msa0010890:three_prime_UTR | 30.0% | |
| AAGAAAAGGTTTAGAGGGAA+GGG | - | chr1_1:16454101-16454120 | None:intergenic | 35.0% | |
| !! | AATTGAGTTGGTACAAGAAG+AGG | - | chr1_1:16454198-16454217 | None:intergenic | 35.0% |
| TTGGTTTCAGAAGAGAAGAT+AGG | - | chr1_1:16454230-16454249 | None:intergenic | 35.0% | |
| GTTAAGGAATGAGAGATTAG+AGG | - | chr1_1:16454264-16454283 | None:intergenic | 35.0% | |
| ! | TTCCTTAACTCCAACACTTT+TGG | + | chr1_1:16454275-16454294 | Msa0010890:CDS | 35.0% |
| !! | TTCCAAAAGTGTTGGAGTTA+AGG | - | chr1_1:16454280-16454299 | None:intergenic | 35.0% |
| ! | GGTAATGATTCCAAAAGTGT+TGG | - | chr1_1:16454288-16454307 | None:intergenic | 35.0% |
| AACAACAGAAACAACGTTGT+TGG | - | chr1_1:16454408-16454427 | None:intergenic | 35.0% | |
| ATCATGAACATGTACCATAC+CGG | - | chr1_1:16454819-16454838 | None:intergenic | 35.0% | |
| GATTGACGTATATTCAACGT+TGG | + | chr1_1:16455007-16455026 | Msa0010890:intron | 35.0% | |
| TTCAAACAAGAGATCTAGCA+AGG | - | chr1_1:16455120-16455139 | None:intergenic | 35.0% | |
| AGAATCATCAATGTTGCTAG+AGG | + | chr1_1:16455643-16455662 | Msa0010890:CDS | 35.0% | |
| TTAGTCAAAGCTCTTGATAG+TGG | + | chr1_1:16455688-16455707 | Msa0010890:CDS | 35.0% | |
| GATCAACACAATTCAGTGAA+TGG | - | chr1_1:16455996-16456015 | None:intergenic | 35.0% | |
| !! | ATTTTGTTTGAATGTGGAGC+AGG | + | chr1_1:16456055-16456074 | Msa0010890:intron | 35.0% |
| TTGCACTAACTTACTGTCTT+TGG | - | chr1_1:16456114-16456133 | None:intergenic | 35.0% | |
| AAAACAAACCTGTGCTTCTT+TGG | - | chr1_1:16456177-16456196 | None:intergenic | 35.0% | |
| !!! | TGTGGTTGTTTTTTTACCTC+AGG | - | chr1_1:16456386-16456405 | None:intergenic | 35.0% |
| ! | GCATAGTTTAATTTCCATGG+AGG | - | chr1_1:16456452-16456471 | None:intergenic | 35.0% |
| AGTTTAGACATAGGTCACAT+TGG | + | chr1_1:16456531-16456550 | Msa0010890:intron | 35.0% | |
| TCACCAGGTATTATCAGAAT+TGG | + | chr1_1:16456636-16456655 | Msa0010890:intron | 35.0% | |
| TGGAATCCAATCTGTAAAAG+TGG | + | chr1_1:16456723-16456742 | Msa0010890:CDS | 35.0% | |
| !! | GGTAAACCACTTTTACAGAT+TGG | - | chr1_1:16456732-16456751 | None:intergenic | 35.0% |
| TGTAAAAGTGGTTTACCGAT+CGG | + | chr1_1:16456735-16456754 | Msa0010890:CDS | 35.0% | |
| CGATGTAATCAGCATTTACA+AGG | - | chr1_1:16456849-16456868 | None:intergenic | 35.0% | |
| GATTACATCGCAAAGCAAAA+AGG | + | chr1_1:16456859-16456878 | Msa0010890:CDS | 35.0% | |
| CCACATTGGATATTTGTATC+TGG | - | chr1_1:16456948-16456967 | None:intergenic | 35.0% | |
| CCAGATACAAATATCCAATG+TGG | + | chr1_1:16456945-16456964 | Msa0010890:CDS | 35.0% | |
| ATTGACGGAAAAGTGAAGTA+TGG | + | chr1_1:16457012-16457031 | Msa0010890:CDS | 35.0% | |
| GGTAAAGTCGGAAACATATT+AGG | + | chr1_1:16457132-16457151 | Msa0010890:CDS | 35.0% | |
| TTCTCAAGAGCTTCCTTATT+TGG | - | chr1_1:16457246-16457265 | None:intergenic | 35.0% | |
| AAGGAAGCTCTTGAGAATAT+TGG | + | chr1_1:16457249-16457268 | Msa0010890:CDS | 35.0% | |
| TTATATGAGCTAGTTCCACT+TGG | - | chr1_1:16457707-16457726 | None:intergenic | 35.0% | |
| TTCTTCAACTTGAGGTTTGG+TGG | - | chr1_1:16453961-16453980 | None:intergenic | 40.0% | |
| GAAGAAAAGGTTTAGAGGGA+AGG | - | chr1_1:16454102-16454121 | None:intergenic | 40.0% | |
| AGGTGAAGGAAGAATTGAGT+TGG | - | chr1_1:16454210-16454229 | None:intergenic | 40.0% | |
| TCAGAAGAGAAGATAGGTGA+AGG | - | chr1_1:16454224-16454243 | None:intergenic | 40.0% | |
| !! | CTCTCAACAACGTTGTTTTG+TGG | + | chr1_1:16454334-16454353 | Msa0010890:CDS | 40.0% |
| ATCTTCTTGCATAGGTCTTC+TGG | - | chr1_1:16454539-16454558 | None:intergenic | 40.0% | |
| AGCTTGAGATCTTCTTGCAT+AGG | - | chr1_1:16454547-16454566 | None:intergenic | 40.0% | |
| GATGCTTTGATTGTGAGAAG+CGG | + | chr1_1:16454569-16454588 | Msa0010890:CDS | 40.0% | |
| ! | ACAAGACAAGTGTTTGAAGC+AGG | + | chr1_1:16454602-16454621 | Msa0010890:CDS | 40.0% |
| ! | CAAGACAAGTGTTTGAAGCA+GGG | + | chr1_1:16454603-16454622 | Msa0010890:CDS | 40.0% |
| ! | TTGAAAGTTGTTGGTAGAGC+TGG | + | chr1_1:16454635-16454654 | Msa0010890:CDS | 40.0% |
| !! | TGGTGTTGGGATTGATAATG+TGG | + | chr1_1:16454655-16454674 | Msa0010890:CDS | 40.0% |
| CTACAAGCTGCTACTGAATT+TGG | + | chr1_1:16454680-16454699 | Msa0010890:CDS | 40.0% | |
| GCAGCAATAGTATTAGCAGT+AGG | - | chr1_1:16454725-16454744 | None:intergenic | 40.0% | |
| TATGGCTCGTAATGTTTCTC+AGG | + | chr1_1:16454775-16454794 | Msa0010890:CDS | 40.0% | |
| !! | ATGTACCATACCGGCTTTAA+GGG | - | chr1_1:16454810-16454829 | None:intergenic | 40.0% |
| ! | TTTTTGCAGGAAAATGGCTG+AGG | + | chr1_1:16455338-16455357 | Msa0010890:intron | 40.0% |
| ! | CAAGTATGTTGGAGTGTCTA+TGG | + | chr1_1:16455363-16455382 | Msa0010890:CDS | 40.0% |
| ! | TATGTTGGAGTGTCTATGGT+TGG | + | chr1_1:16455367-16455386 | Msa0010890:CDS | 40.0% |
| ! | ATGTTGGAGTGTCTATGGTT+GGG | + | chr1_1:16455368-16455387 | Msa0010890:CDS | 40.0% |
| TGGAAAAGTTGGATCTGAAG+TGG | + | chr1_1:16455414-16455433 | Msa0010890:CDS | 40.0% | |
| GTGAAGTGAGATGAAATCAG+CGG | - | chr1_1:16455554-16455573 | None:intergenic | 40.0% | |
| TTGTTAGTAGTTGGAGTGAG+AGG | - | chr1_1:16455580-16455599 | None:intergenic | 40.0% | |
| ATCATCAATGTTGCTAGAGG+TGG | + | chr1_1:16455646-16455665 | Msa0010890:CDS | 40.0% | |
| !! | TGATAGTGGAATTGTTGCTC+AGG | + | chr1_1:16455702-16455721 | Msa0010890:CDS | 40.0% |
| CTAGCAATGTTCAACTCGTT+TGG | + | chr1_1:16455782-16455801 | Msa0010890:intron | 40.0% | |
| TTCAACTCGTTTGGAAATCG+TGG | + | chr1_1:16455791-16455810 | Msa0010890:intron | 40.0% | |
| TGGAAATCGCAATTGCATAG+TGG | + | chr1_1:16455866-16455885 | Msa0010890:intron | 40.0% | |
| ACTAACTTACTGTCTTTGGC+TGG | - | chr1_1:16456110-16456129 | None:intergenic | 40.0% | |
| TGTGGCTATTGAAATAGCAG+AGG | + | chr1_1:16456298-16456317 | Msa0010890:CDS | 40.0% | |
| GAGCCAATTCTGATAATACC+TGG | - | chr1_1:16456642-16456661 | None:intergenic | 40.0% | |
| ! | TGTATCTGGATTGACTCAAC+AGG | - | chr1_1:16456934-16456953 | None:intergenic | 40.0% |
| TGATACAGCACTTGCGAATT+TGG | - | chr1_1:16456974-16456993 | None:intergenic | 40.0% | |
| !! | ACTGGTCAGATAAGCATTGA+CGG | + | chr1_1:16456997-16457016 | Msa0010890:CDS | 40.0% |
| CAAAAGATCCCACACATGTA+AGG | - | chr1_1:16457047-16457066 | None:intergenic | 40.0% | |
| ! | CTTACATGTGTGGGATCTTT+TGG | + | chr1_1:16457045-16457064 | Msa0010890:CDS | 40.0% |
| ! | AATGTGAGCTTTATGAGCGT+CGG | + | chr1_1:16457168-16457187 | Msa0010890:CDS | 40.0% |
| !! | AAGAAAGCGCTTATGGCTAT+TGG | + | chr1_1:16457207-16457226 | Msa0010890:CDS | 40.0% |
| AACACAAACTCCTCAATAGC+AGG | - | chr1_1:16457282-16457301 | None:intergenic | 40.0% | |
| GCTTGAGAAAAGTGATAGCT+TGG | + | chr1_1:16457430-16457449 | Msa0010890:three_prime_UTR | 40.0% | |
| !! | TCAACTTGAGGTTTGGTGGT+TGG | - | chr1_1:16453957-16453976 | None:intergenic | 45.0% |
| ATCTTGGTCTCCGAGAAACT+CGG | + | chr1_1:16454452-16454471 | Msa0010890:CDS | 45.0% | |
| ! | CAAGTGTTTGAAGCAGGGAA+AGG | + | chr1_1:16454608-16454627 | Msa0010890:CDS | 45.0% |
| ! | TTGTTGGTAGAGCTGGTGTT+GGG | + | chr1_1:16454642-16454661 | Msa0010890:CDS | 45.0% |
| ACTATTGCTGCTGCTGAACA+TGG | + | chr1_1:16454734-16454753 | Msa0010890:CDS | 45.0% | |
| CTATTGCTGCTGCTGAACAT+GGG | + | chr1_1:16454735-16454754 | Msa0010890:CDS | 45.0% | |
| GATTGCTCTTCTTGCTGCTA+TGG | + | chr1_1:16454757-16454776 | Msa0010890:CDS | 45.0% | |
| !! | CATGTACCATACCGGCTTTA+AGG | - | chr1_1:16454811-16454830 | None:intergenic | 45.0% |
| TGGCTGAGGAACAAGTATGT+TGG | + | chr1_1:16455352-16455371 | Msa0010890:CDS | 45.0% | |
| ! | AAGTTGGATCTGAAGTGGCA+AGG | + | chr1_1:16455419-16455438 | Msa0010890:CDS | 45.0% |
| CTCTATCAGCTGGAGCATAA+GGG | - | chr1_1:16455483-16455502 | None:intergenic | 45.0% | |
| CACGAAGTCGCGATTAACAA+TGG | + | chr1_1:16455924-16455943 | Msa0010890:intron | 45.0% | |
| AGCTCTTGATGTGTTCACTG+AGG | + | chr1_1:16456079-16456098 | Msa0010890:CDS | 45.0% | |
| AACTTACTGTCTTTGGCTGG+AGG | - | chr1_1:16456107-16456126 | None:intergenic | 45.0% | |
| GTGATTGCTACTCCTCATCT+TGG | + | chr1_1:16456143-16456162 | Msa0010890:CDS | 45.0% | |
| TTTGACTCAATAGGAGGGTG+TGG | + | chr1_1:16456280-16456299 | Msa0010890:intron | 45.0% | |
| GAAATAGCAGAGGCTGTTGT+TGG | + | chr1_1:16456308-16456327 | Msa0010890:CDS | 45.0% | |
| GCTGTTGTTGGTGCATTGAA+TGG | + | chr1_1:16456320-16456339 | Msa0010890:CDS | 45.0% | |
| AACTGCTGTCAATGCTCCTA+TGG | + | chr1_1:16456355-16456374 | Msa0010890:CDS | 45.0% | |
| TTTACCTCAGGAGCAACCAT+AGG | - | chr1_1:16456374-16456393 | None:intergenic | 45.0% | |
| ATTTCCATGGAGGCTGACTA+TGG | - | chr1_1:16456442-16456461 | None:intergenic | 45.0% | |
| ! | ATTGGCTCCATATGTTGTGC+TGG | + | chr1_1:16456654-16456673 | Msa0010890:CDS | 45.0% |
| TTCTCAGCCAGCACAACATA+TGG | - | chr1_1:16456664-16456683 | None:intergenic | 45.0% | |
| ! | TTAGCTGTGCAGTTGGTATC+CGG | + | chr1_1:16456694-16456713 | Msa0010890:CDS | 45.0% |
| AGATTGGATTCCACTTCCTC+CGG | - | chr1_1:16456716-16456735 | None:intergenic | 45.0% | |
| AAGTCTGGTGTCTAGGTCAT+CGG | - | chr1_1:16456770-16456789 | None:intergenic | 45.0% | |
| CTTCGAGCCATGATCACAAA+AGG | + | chr1_1:16456790-16456809 | Msa0010890:CDS | 45.0% | |
| CATAAGCGAGGAAAGAGTAG+TGG | + | chr1_1:16456888-16456907 | Msa0010890:CDS | 45.0% | |
| ! | ATTGACTCAACAGGTAGCTC+AGG | - | chr1_1:16456925-16456944 | None:intergenic | 45.0% |
| TGCGAATTTGGACTCCACAT+TGG | - | chr1_1:16456962-16456981 | None:intergenic | 45.0% | |
| TACACCACACCTTACATGTG+TGG | + | chr1_1:16457035-16457054 | Msa0010890:CDS | 45.0% | |
| ACACCACACCTTACATGTGT+GGG | + | chr1_1:16457036-16457055 | Msa0010890:CDS | 45.0% | |
| ! | ATGTGTGGGATCTTTTGGTG+TGG | + | chr1_1:16457050-16457069 | Msa0010890:CDS | 45.0% |
| GTGTGGATGTGAGCTTAGAA+GGG | + | chr1_1:16457067-16457086 | Msa0010890:CDS | 45.0% | |
| CCTGGGATGATTGGTAAAGT+CGG | + | chr1_1:16457120-16457139 | Msa0010890:CDS | 45.0% | |
| CGTCGATGAAGAGCCAAATA+AGG | + | chr1_1:16457230-16457249 | Msa0010890:CDS | 45.0% | |
| AATGTGATGCACCAACCAAG+TGG | + | chr1_1:16457689-16457708 | Msa0010890:three_prime_UTR | 45.0% | |
| ATGAGCTAGTTCCACTTGGT+TGG | - | chr1_1:16457703-16457722 | None:intergenic | 45.0% | |
| !! | ACTTGAGGTTTGGTGGTTGG+TGG | - | chr1_1:16453954-16453973 | None:intergenic | 50.0% |
| TTCTCGGAGACCAAGATCGT+TGG | - | chr1_1:16454449-16454468 | None:intergenic | 50.0% | |
| ! | GTTGTTGGTAGAGCTGGTGT+TGG | + | chr1_1:16454641-16454660 | Msa0010890:CDS | 50.0% |
| GCTGATGCTTCCCTTAAAGC+CGG | + | chr1_1:16454797-16454816 | Msa0010890:CDS | 50.0% | |
| TGCTTCCCTTAAAGCCGGTA+TGG | + | chr1_1:16454802-16454821 | Msa0010890:intron | 50.0% | |
| GCAAGGCGTGCAAAAGGATT+AGG | + | chr1_1:16455436-16455455 | Msa0010890:CDS | 50.0% | |
| GCTCTATCAGCTGGAGCATA+AGG | - | chr1_1:16455484-16455503 | None:intergenic | 50.0% | |
| ! | AACCTGTGCTTCTTTGGTGC+TGG | - | chr1_1:16456171-16456190 | None:intergenic | 50.0% |
| AAGACCATAGTCAGCCTCCA+TGG | + | chr1_1:16456435-16456454 | Msa0010890:intron | 50.0% | |
| ! | AGGAAGGTTAGCTGTGCAGT+TGG | + | chr1_1:16456687-16456706 | Msa0010890:CDS | 50.0% |
| AGTCTGGTGTCTAGGTCATC+GGG | - | chr1_1:16456769-16456788 | None:intergenic | 50.0% | |
| CTCGAAGAAGTCTGGTGTCT+AGG | - | chr1_1:16456777-16456796 | None:intergenic | 50.0% | |
| GATCATGGCTCGAAGAAGTC+TGG | - | chr1_1:16456785-16456804 | None:intergenic | 50.0% | |
| AAAAGGCCTTCGCATAAGCG+AGG | + | chr1_1:16456876-16456895 | Msa0010890:CDS | 50.0% | |
| CTCTTTCCTCGCTTATGCGA+AGG | - | chr1_1:16456885-16456904 | None:intergenic | 50.0% | |
| ! | GCAAGTGCTGTATCAGAGAC+TGG | + | chr1_1:16456979-16456998 | Msa0010890:CDS | 50.0% |
| GATCCCACACATGTAAGGTG+TGG | - | chr1_1:16457042-16457061 | None:intergenic | 50.0% | |
| GGTGTGGATGTGAGCTTAGA+AGG | + | chr1_1:16457066-16457085 | Msa0010890:CDS | 50.0% | |
| ACTGATCAGCCTGGGATGAT+TGG | + | chr1_1:16457111-16457130 | Msa0010890:CDS | 50.0% | |
| CCGACTTTACCAATCATCCC+AGG | - | chr1_1:16457123-16457142 | None:intergenic | 50.0% | |
| !! | GCGTAGGAAGAAAGCGCTTA+TGG | + | chr1_1:16457200-16457219 | Msa0010890:CDS | 50.0% |
| !! | TGAGGTTTGGTGGTTGGTGG+AGG | - | chr1_1:16453951-16453970 | None:intergenic | 55.0% |
| TCCGAGAAACTCGGAGAAGC+AGG | + | chr1_1:16454461-16454480 | Msa0010890:CDS | 55.0% | |
| GCCTGCTTCTCCGAGTTTCT+CGG | - | chr1_1:16454465-16454484 | None:intergenic | 55.0% | |
| GAAGTGGCAAGGCGTGCAAA+AGG | + | chr1_1:16455430-16455449 | Msa0010890:CDS | 55.0% | |
| ACAGCACGTGCTCTATCAGC+TGG | - | chr1_1:16455493-16455512 | None:intergenic | 55.0% | |
| GCTGATAGAGCACGTGCTGT+TGG | + | chr1_1:16455493-16455512 | Msa0010890:CDS | 55.0% | |
| !! | TTGGTGCTGGCTCCAAGATG+AGG | - | chr1_1:16456158-16456177 | None:intergenic | 55.0% |
| ! | AGCCAGCACCAAAGAAGCAC+AGG | + | chr1_1:16456166-16456185 | Msa0010890:CDS | 55.0% |
| TGCTCCTATGGTTGCTCCTG+AGG | + | chr1_1:16456367-16456386 | Msa0010890:CDS | 55.0% | |
| !! | GTTGTGCTGGCTGAGAAGCT+AGG | + | chr1_1:16456667-16456686 | Msa0010890:CDS | 55.0% |
| ! | TGCTGGCTGAGAAGCTAGGA+AGG | + | chr1_1:16456671-16456690 | Msa0010890:CDS | 55.0% |
| ! | CAGTTGGTATCCGGAGGAAG+TGG | + | chr1_1:16456703-16456722 | Msa0010890:CDS | 55.0% |
| AAGTGGTTTACCGATCGGCC+AGG | + | chr1_1:16456740-16456759 | Msa0010890:CDS | 55.0% | |
| AGTGGTTTACCGATCGGCCA+GGG | + | chr1_1:16456741-16456760 | Msa0010890:CDS | 55.0% | |
| TGCAGACAGACTGATCAGCC+TGG | + | chr1_1:16457102-16457121 | Msa0010890:CDS | 55.0% | |
| GCAGACAGACTGATCAGCCT+GGG | + | chr1_1:16457103-16457122 | Msa0010890:CDS | 55.0% | |
| TGGAGCTGTGCCTGCTATTG+AGG | + | chr1_1:16457269-16457288 | Msa0010890:CDS | 55.0% | |
| ! | GCTGTGCAGTTGGTATCCGG+AGG | + | chr1_1:16456697-16456716 | Msa0010890:CDS | 60.0% |
| GTGGTTTACCGATCGGCCAG+GGG | + | chr1_1:16456742-16456761 | Msa0010890:CDS | 60.0% | |
| GCGTCGGAAGAACATCGCGT+AGG | + | chr1_1:16457184-16457203 | Msa0010890:CDS | 60.0% | |
| GTCTAGGTCATCGGGACCCC+TGG | - | chr1_1:16456761-16456780 | None:intergenic | 65.0% | |
| CATCGGGACCCCTGGCCGAT+CGG | - | chr1_1:16456753-16456772 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 16453941 | 16457825 | 16453941 | ID=Msa0010890;Name=Msa0010890 |
| chr1_1 | mRNA | 16453941 | 16457825 | 16453941 | ID=Msa0010890-mRNA-1;Parent=Msa0010890;Name=Msa0010890-mRNA-1;_AED=0.03;_eAED=0.03;_QI=247|1|1|1|1|1|5|511|628 |
| chr1_1 | exon | 16453941 | 16454818 | 16453941 | ID=Msa0010890-mRNA-1:exon:5995;Parent=Msa0010890-mRNA-1 |
| chr1_1 | exon | 16455347 | 16455723 | 16455347 | ID=Msa0010890-mRNA-1:exon:5996;Parent=Msa0010890-mRNA-1 |
| chr1_1 | exon | 16456077 | 16456187 | 16456077 | ID=Msa0010890-mRNA-1:exon:5997;Parent=Msa0010890-mRNA-1 |
| chr1_1 | exon | 16456293 | 16456388 | 16456293 | ID=Msa0010890-mRNA-1:exon:5998;Parent=Msa0010890-mRNA-1 |
| chr1_1 | exon | 16456643 | 16457825 | 16456643 | ID=Msa0010890-mRNA-1:exon:5999;Parent=Msa0010890-mRNA-1 |
| chr1_1 | five_prime_UTR | 16453941 | 16454187 | 16453941 | ID=Msa0010890-mRNA-1:five_prime_utr;Parent=Msa0010890-mRNA-1 |
| chr1_1 | CDS | 16454188 | 16454818 | 16454188 | ID=Msa0010890-mRNA-1:cds;Parent=Msa0010890-mRNA-1 |
| chr1_1 | CDS | 16455347 | 16455723 | 16455347 | ID=Msa0010890-mRNA-1:cds;Parent=Msa0010890-mRNA-1 |
| chr1_1 | CDS | 16456077 | 16456187 | 16456077 | ID=Msa0010890-mRNA-1:cds;Parent=Msa0010890-mRNA-1 |
| chr1_1 | CDS | 16456293 | 16456388 | 16456293 | ID=Msa0010890-mRNA-1:cds;Parent=Msa0010890-mRNA-1 |
| chr1_1 | CDS | 16456643 | 16457314 | 16456643 | ID=Msa0010890-mRNA-1:cds;Parent=Msa0010890-mRNA-1 |
| chr1_1 | three_prime_UTR | 16457315 | 16457825 | 16457315 | ID=Msa0010890-mRNA-1:three_prime_utr;Parent=Msa0010890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
