Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979510 | XP_003618833.1 | 94.052 | 269 | 16 | 0 | 1 | 269 | 1 | 269 | 0.0 | 519 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979510 | sp|Q5C9I9|ISPD_MENPI | 56.048 | 248 | 109 | 0 | 12 | 259 | 6 | 253 | 3.07e-88 | 266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979510 | G7KNM8 | 94.052 | 269 | 16 | 0 | 1 | 269 | 1 | 269 | 0.0 | 519 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa0979510 | 0.805296 | 1.429224e-49 | -8.615850e-47 |
| Msa0003040 | Msa0979510 | 0.832568 | 8.776307e-56 | -8.615850e-47 |
| Msa0004880 | Msa0979510 | 0.810975 | 8.824071e-51 | -8.615850e-47 |
| Msa0012440 | Msa0979510 | 0.802472 | 5.519341e-49 | -8.615850e-47 |
| Msa0017510 | Msa0979510 | 0.804116 | 2.520576e-49 | -8.615850e-47 |
| Msa0029910 | Msa0979510 | 0.815265 | 1.010076e-51 | -8.615850e-47 |
| Msa0036430 | Msa0979510 | 0.820162 | 7.933182e-53 | -8.615850e-47 |
| Msa0043210 | Msa0979510 | 0.811059 | 8.459222e-51 | -8.615850e-47 |
| Msa0050040 | Msa0979510 | 0.849783 | 2.590865e-60 | -8.615850e-47 |
| Msa0051790 | Msa0979510 | 0.821485 | 3.937940e-53 | -8.615850e-47 |
| Msa0080990 | Msa0979510 | 0.800189 | 1.619270e-48 | -8.615850e-47 |
| Msa0084500 | Msa0979510 | 0.816704 | 4.819912e-52 | -8.615850e-47 |
| Msa0095540 | Msa0979510 | 0.800896 | 1.162261e-48 | -8.615850e-47 |
| Msa0096000 | Msa0979510 | 0.802356 | 5.832498e-49 | -8.615850e-47 |
| Msa0102990 | Msa0979510 | 0.849418 | 3.276261e-60 | -8.615850e-47 |
| Msa0106790 | Msa0979510 | 0.812320 | 4.499086e-51 | -8.615850e-47 |
| Msa0611380 | Msa0979510 | 0.813760 | 2.174785e-51 | -8.615850e-47 |
| Msa0625890 | Msa0979510 | 0.815142 | 1.075694e-51 | -8.615850e-47 |
| Msa0631120 | Msa0979510 | 0.831113 | 2.006498e-55 | -8.615850e-47 |
| Msa0641250 | Msa0979510 | 0.800413 | 1.458276e-48 | -8.615850e-47 |
| Msa0641360 | Msa0979510 | 0.806474 | 8.083404e-50 | -8.615850e-47 |
| Msa0663680 | Msa0979510 | 0.821290 | 4.366953e-53 | -8.615850e-47 |
| Msa0666030 | Msa0979510 | 0.831713 | 1.428308e-55 | -8.615850e-47 |
| Msa0669340 | Msa0979510 | 0.822010 | 2.977924e-53 | -8.615850e-47 |
| Msa0669840 | Msa0979510 | 0.846398 | 2.227825e-59 | -8.615850e-47 |
| Msa0697300 | Msa0979510 | 0.801148 | 1.032243e-48 | -8.615850e-47 |
| Msa0707220 | Msa0979510 | 0.802892 | 4.521574e-49 | -8.615850e-47 |
| Msa0716450 | Msa0979510 | 0.821346 | 4.238975e-53 | -8.615850e-47 |
| Msa0717260 | Msa0979510 | 0.807361 | 5.247578e-50 | -8.615850e-47 |
| Msa0725860 | Msa0979510 | 0.802469 | 5.528791e-49 | -8.615850e-47 |
| Msa0737190 | Msa0979510 | 0.808091 | 3.672576e-50 | -8.615850e-47 |
| Msa0739580 | Msa0979510 | 0.810973 | 8.832297e-51 | -8.615850e-47 |
| Msa0742180 | Msa0979510 | 0.804953 | 1.686141e-49 | -8.615850e-47 |
| Msa0754230 | Msa0979510 | 0.803529 | 3.337472e-49 | -8.615850e-47 |
| Msa0754370 | Msa0979510 | 0.806592 | 7.634304e-50 | -8.615850e-47 |
| Msa0786040 | Msa0979510 | 0.803888 | 2.812217e-49 | -8.615850e-47 |
| Msa0795690 | Msa0979510 | 0.801481 | 8.823229e-49 | -8.615850e-47 |
| Msa0810020 | Msa0979510 | 0.801789 | 7.629404e-49 | -8.615850e-47 |
| Msa0816450 | Msa0979510 | 0.801245 | 9.863988e-49 | -8.615850e-47 |
| Msa0823400 | Msa0979510 | 0.838965 | 2.101227e-57 | -8.615850e-47 |
| Msa0833340 | Msa0979510 | 0.804798 | 1.816886e-49 | -8.615850e-47 |
| Msa0130570 | Msa0979510 | 0.823259 | 1.524833e-53 | -8.615850e-47 |
| Msa0137150 | Msa0979510 | 0.827044 | 1.943934e-54 | -8.615850e-47 |
| Msa0146920 | Msa0979510 | 0.827277 | 1.710000e-54 | -8.615850e-47 |
| Msa0147600 | Msa0979510 | 0.802241 | 6.158124e-49 | -8.615850e-47 |
| Msa0149140 | Msa0979510 | 0.811735 | 6.034199e-51 | -8.615850e-47 |
| Msa0153420 | Msa0979510 | 0.831696 | 1.442275e-55 | -8.615850e-47 |
| Msa0156250 | Msa0979510 | 0.813351 | 2.675050e-51 | -8.615850e-47 |
| Msa0157290 | Msa0979510 | 0.804531 | 2.066072e-49 | -8.615850e-47 |
| Msa0176470 | Msa0979510 | 0.831151 | 1.964329e-55 | -8.615850e-47 |
| Msa0191040 | Msa0979510 | 0.858952 | 5.785283e-63 | -8.615850e-47 |
| Msa0194380 | Msa0979510 | 0.835264 | 1.856311e-56 | -8.615850e-47 |
| Msa0197930 | Msa0979510 | 0.830894 | 2.270870e-55 | -8.615850e-47 |
| Msa0200030 | Msa0979510 | 0.828984 | 6.634170e-55 | -8.615850e-47 |
| Msa0203030 | Msa0979510 | 0.839799 | 1.276887e-57 | -8.615850e-47 |
| Msa0206800 | Msa0979510 | 0.863048 | 3.287706e-64 | -8.615850e-47 |
| Msa0219190 | Msa0979510 | 0.856747 | 2.610158e-62 | -8.615850e-47 |
| Msa0220300 | Msa0979510 | 0.802164 | 6.387556e-49 | -8.615850e-47 |
| Msa0233340 | Msa0979510 | 0.858887 | 6.048627e-63 | -8.615850e-47 |
| Msa0236110 | Msa0979510 | 0.880036 | 7.640188e-70 | -8.615850e-47 |
| Msa0370030 | Msa0979510 | 0.801212 | 1.001658e-48 | -8.615850e-47 |
| Msa0373960 | Msa0979510 | 0.839727 | 1.333137e-57 | -8.615850e-47 |
| Msa0382010 | Msa0979510 | 0.802705 | 4.941826e-49 | -8.615850e-47 |
| Msa0392420 | Msa0979510 | 0.827452 | 1.552654e-54 | -8.615850e-47 |
| Msa0392460 | Msa0979510 | 0.817449 | 3.279170e-52 | -8.615850e-47 |
| Msa0392490 | Msa0979510 | 0.835157 | 1.976053e-56 | -8.615850e-47 |
| Msa0406000 | Msa0979510 | 0.830615 | 2.657479e-55 | -8.615850e-47 |
| Msa0408630 | Msa0979510 | 0.805875 | 1.080921e-49 | -8.615850e-47 |
| Msa0417440 | Msa0979510 | 0.820075 | 8.306361e-53 | -8.615850e-47 |
| Msa0423100 | Msa0979510 | 0.819894 | 9.136463e-53 | -8.615850e-47 |
| Msa0424330 | Msa0979510 | 0.809977 | 1.448849e-50 | -8.615850e-47 |
| Msa0436500 | Msa0979510 | 0.839976 | 1.147960e-57 | -8.615850e-47 |
| Msa0451400 | Msa0979510 | 0.853668 | 2.052324e-61 | -8.615850e-47 |
| Msa0464540 | Msa0979510 | 0.816626 | 5.018325e-52 | -8.615850e-47 |
| Msa0469260 | Msa0979510 | 0.808665 | 2.769477e-50 | -8.615850e-47 |
| Msa0481110 | Msa0979510 | 0.805695 | 1.178854e-49 | -8.615850e-47 |
| Msa0242540 | Msa0979510 | 0.819836 | 9.419872e-53 | -8.615850e-47 |
| Msa0251240 | Msa0979510 | 0.838533 | 2.717264e-57 | -8.615850e-47 |
| Msa0266450 | Msa0979510 | 0.809787 | 1.592371e-50 | -8.615850e-47 |
| Msa0273990 | Msa0979510 | 0.853396 | 2.457156e-61 | -8.615850e-47 |
| Msa0277290 | Msa0979510 | 0.852311 | 5.017234e-61 | -8.615850e-47 |
| Msa0280750 | Msa0979510 | 0.834601 | 2.728084e-56 | -8.615850e-47 |
| Msa0288190 | Msa0979510 | 0.821422 | 4.071192e-53 | -8.615850e-47 |
| Msa0288200 | Msa0979510 | 0.858580 | 7.472576e-63 | -8.615850e-47 |
| Msa0298240 | Msa0979510 | 0.843691 | 1.199473e-58 | -8.615850e-47 |
| Msa0306120 | Msa0979510 | 0.809966 | 1.456811e-50 | -8.615850e-47 |
| Msa0311690 | Msa0979510 | 0.862318 | 5.515583e-64 | -8.615850e-47 |
| Msa0314630 | Msa0979510 | 0.878712 | 2.248538e-69 | -8.615850e-47 |
| Msa0315250 | Msa0979510 | 0.800953 | 1.131757e-48 | -8.615850e-47 |
| Msa0317280 | Msa0979510 | 0.802707 | 4.936903e-49 | -8.615850e-47 |
| Msa0317340 | Msa0979510 | 0.805031 | 1.624690e-49 | -8.615850e-47 |
| Msa0322830 | Msa0979510 | 0.859947 | 2.906000e-63 | -8.615850e-47 |
| Msa0322840 | Msa0979510 | 0.813908 | 2.016588e-51 | -8.615850e-47 |
| Msa0322860 | Msa0979510 | 0.850825 | 1.321724e-60 | -8.615850e-47 |
| Msa0326540 | Msa0979510 | 0.859991 | 2.819369e-63 | -8.615850e-47 |
| Msa0329620 | Msa0979510 | 0.819625 | 1.052702e-52 | -8.615850e-47 |
| Msa0331530 | Msa0979510 | 0.836423 | 9.440519e-57 | -8.615850e-47 |
| Msa0331540 | Msa0979510 | 0.830302 | 3.170950e-55 | -8.615850e-47 |
| Msa0344570 | Msa0979510 | 0.832179 | 1.095649e-55 | -8.615850e-47 |
| Msa0351770 | Msa0979510 | 0.827098 | 1.887682e-54 | -8.615850e-47 |
| Msa0359250 | Msa0979510 | 0.861580 | 9.282007e-64 | -8.615850e-47 |
| Msa0487570 | Msa0979510 | 0.833585 | 4.900202e-56 | -8.615850e-47 |
| Msa0487630 | Msa0979510 | 0.841960 | 3.460377e-58 | -8.615850e-47 |
| Msa0492190 | Msa0979510 | 0.823718 | 1.190841e-53 | -8.615850e-47 |
| Msa0509790 | Msa0979510 | 0.807063 | 6.068430e-50 | -8.615850e-47 |
| Msa0515950 | Msa0979510 | 0.817545 | 3.119463e-52 | -8.615850e-47 |
| Msa0520510 | Msa0979510 | 0.849548 | 3.012192e-60 | -8.615850e-47 |
| Msa0531430 | Msa0979510 | 0.833017 | 6.789882e-56 | -8.615850e-47 |
| Msa0534570 | Msa0979510 | 0.810510 | 1.112388e-50 | -8.615850e-47 |
| Msa0534590 | Msa0979510 | 0.833639 | 4.750869e-56 | -8.615850e-47 |
| Msa0534930 | Msa0979510 | 0.827205 | 1.779129e-54 | -8.615850e-47 |
| Msa0535040 | Msa0979510 | 0.833959 | 3.951733e-56 | -8.615850e-47 |
| Msa0537920 | Msa0979510 | 0.843927 | 1.037061e-58 | -8.615850e-47 |
| Msa0538220 | Msa0979510 | 0.810632 | 1.046519e-50 | -8.615850e-47 |
| Msa0575740 | Msa0979510 | 0.847403 | 1.182445e-59 | -8.615850e-47 |
| Msa0590800 | Msa0979510 | 0.827746 | 1.319297e-54 | -8.615850e-47 |
| Msa0591790 | Msa0979510 | 0.817296 | 3.548830e-52 | -8.615850e-47 |
| Msa0591800 | Msa0979510 | 0.823921 | 1.067753e-53 | -8.615850e-47 |
| Msa0858840 | Msa0979510 | 0.800461 | 1.425629e-48 | -8.615850e-47 |
| Msa0860170 | Msa0979510 | 0.801044 | 1.084069e-48 | -8.615850e-47 |
| Msa0862100 | Msa0979510 | 0.804463 | 2.133993e-49 | -8.615850e-47 |
| Msa0862310 | Msa0979510 | 0.811268 | 7.621946e-51 | -8.615850e-47 |
| Msa0867350 | Msa0979510 | 0.821215 | 4.545738e-53 | -8.615850e-47 |
| Msa0880140 | Msa0979510 | 0.804978 | 1.666182e-49 | -8.615850e-47 |
| Msa0880710 | Msa0979510 | 0.816907 | 4.341600e-52 | -8.615850e-47 |
| Msa0885060 | Msa0979510 | 0.826407 | 2.758742e-54 | -8.615850e-47 |
| Msa0896350 | Msa0979510 | 0.807006 | 6.240834e-50 | -8.615850e-47 |
| Msa0898730 | Msa0979510 | 0.822167 | 2.737819e-53 | -8.615850e-47 |
| Msa0899950 | Msa0979510 | 0.802743 | 4.854689e-49 | -8.615850e-47 |
| Msa0922750 | Msa0979510 | 0.822528 | 2.257790e-53 | -8.615850e-47 |
| Msa0929870 | Msa0979510 | 0.850126 | 2.077054e-60 | -8.615850e-47 |
| Msa0936410 | Msa0979510 | 0.809329 | 1.996674e-50 | -8.615850e-47 |
| Msa0944760 | Msa0979510 | 0.810122 | 1.348566e-50 | -8.615850e-47 |
| Msa0946210 | Msa0979510 | 0.901270 | 3.174553e-78 | -8.615850e-47 |
| Msa0961560 | Msa0979510 | 0.829566 | 4.791421e-55 | -8.615850e-47 |
| Msa0965310 | Msa0979510 | 0.818787 | 1.633481e-52 | -8.615850e-47 |
| Msa0973250 | Msa0979510 | 0.813095 | 3.044606e-51 | -8.615850e-47 |
| Msa0979510 | Msa0996270 | 0.833651 | 4.718323e-56 | -8.615850e-47 |
| Msa0979510 | Msa0999300 | 0.826095 | 3.274114e-54 | -8.615850e-47 |
| Msa0979510 | Msa0999340 | 0.832149 | 1.114636e-55 | -8.615850e-47 |
| Msa0979510 | Msa0999350 | 0.809319 | 2.007128e-50 | -8.615850e-47 |
| Msa0979510 | Msa0999360 | 0.805992 | 1.021424e-49 | -8.615850e-47 |
| Msa0979510 | Msa0999390 | 0.814463 | 1.521023e-51 | -8.615850e-47 |
| Msa0979510 | Msa0999400 | 0.805032 | 1.623329e-49 | -8.615850e-47 |
| Msa0979510 | Msa0999410 | 0.813152 | 2.958571e-51 | -8.615850e-47 |
| Msa0979510 | Msa0999700 | 0.802408 | 5.690089e-49 | -8.615850e-47 |
| Msa0979510 | Msa1001890 | 0.806995 | 6.274980e-50 | -8.615850e-47 |
| Msa0979510 | Msa1016600 | 0.808773 | 2.627294e-50 | -8.615850e-47 |
| Msa0979510 | Msa1033560 | 0.807046 | 6.120070e-50 | -8.615850e-47 |
| Msa0979510 | Msa1037900 | 0.850096 | 2.117999e-60 | -8.615850e-47 |
| Msa0979510 | Msa1037910 | 0.819345 | 1.219484e-52 | -8.615850e-47 |
| Msa0979510 | Msa1041530 | 0.815337 | 9.733343e-52 | -8.615850e-47 |
| Msa0979510 | Msa1042670 | 0.829367 | 5.356091e-55 | -8.615850e-47 |
| Msa0979510 | Msa1073340 | 0.844941 | 5.535382e-59 | -8.615850e-47 |
| Msa0979510 | Msa1073350 | 0.817532 | 3.140330e-52 | -8.615850e-47 |
| Msa0979510 | Msa1081570 | 0.834030 | 3.793673e-56 | -8.615850e-47 |
| Msa0979510 | Msa1092020 | 0.810353 | 1.202271e-50 | -8.615850e-47 |
| Msa0979510 | Msa1113850 | 0.838401 | 2.939689e-57 | -8.615850e-47 |
| Msa0979510 | Msa1123880 | 0.802499 | 5.450669e-49 | -8.615850e-47 |
| Msa0979510 | Msa1127140 | 0.828490 | 8.731865e-55 | -8.615850e-47 |
| Msa0979510 | Msa1129960 | 0.850018 | 2.227337e-60 | -8.615850e-47 |
| Msa0979510 | Msa1129970 | 0.804741 | 1.867453e-49 | -8.615850e-47 |
| Msa0979510 | Msa1130010 | 0.808076 | 3.698819e-50 | -8.615850e-47 |
| Msa0979510 | Msa1135380 | 0.803645 | 3.158010e-49 | -8.615850e-47 |
| Msa0979510 | Msa1145020 | 0.827552 | 1.469321e-54 | -8.615850e-47 |
| Msa0979510 | Msa1160400 | 0.802761 | 4.813084e-49 | -8.615850e-47 |
| Msa0979510 | Msa1166400 | 0.819598 | 1.067732e-52 | -8.615850e-47 |
| Msa0979510 | Msa1169990 | 0.842261 | 2.881238e-58 | -8.615850e-47 |
| Msa0979510 | Msa1172670 | 0.809136 | 2.196963e-50 | -8.615850e-47 |
| Msa0979510 | Msa1176160 | 0.813340 | 2.690091e-51 | -8.615850e-47 |
| Msa0979510 | Msa1201110 | 0.819472 | 1.140879e-52 | -8.615850e-47 |
| Msa0979510 | Msa1201160 | 0.852170 | 5.501937e-61 | -8.615850e-47 |
| Msa0979510 | Msa1218480 | 0.828927 | 6.847543e-55 | -8.615850e-47 |
| Msa0979510 | Msa1227340 | 0.823028 | 1.726556e-53 | -8.615850e-47 |
| Msa0979510 | Msa1227950 | 0.805606 | 1.230849e-49 | -8.615850e-47 |
| Msa0979510 | Msa1227970 | 0.817738 | 2.821453e-52 | -8.615850e-47 |
| Msa0979510 | Msa1228190 | 0.854109 | 1.531988e-61 | -8.615850e-47 |
| Msa0979510 | Msa1228610 | 0.826783 | 2.243865e-54 | -8.615850e-47 |
| Msa0979510 | Msa1271260 | 0.827724 | 1.335351e-54 | -8.615850e-47 |
| Msa0979510 | Msa1292040 | 0.830994 | 2.145818e-55 | -8.615850e-47 |
| Msa0979510 | Msa1294290 | 0.854138 | 1.502845e-61 | -8.615850e-47 |
| Msa0979510 | Msa1303250 | 0.811317 | 7.437502e-51 | -8.615850e-47 |
| Msa0979510 | Msa1305510 | 0.816641 | 4.981080e-52 | -8.615850e-47 |
| Msa0979510 | Msa1307190 | 0.812318 | 4.502299e-51 | -8.615850e-47 |
| Msa0979510 | Msa1340390 | 0.801459 | 8.916666e-49 | -8.615850e-47 |
| Msa0979510 | Msa1345420 | 0.901105 | 3.750767e-78 | -8.615850e-47 |
| Msa0979510 | Msa1374550 | 0.825869 | 3.705506e-54 | -8.615850e-47 |
| Msa0979510 | Msa1379970 | 0.849936 | 2.348274e-60 | -8.615850e-47 |
| Msa0979510 | Msa1389050 | 0.816032 | 6.816268e-52 | -8.615850e-47 |
| Msa0979510 | Msa1401150 | 0.802082 | 6.642390e-49 | -8.615850e-47 |
| Msa0979510 | Msa1406780 | 0.811001 | 8.710582e-51 | -8.615850e-47 |
| Msa0979510 | Msa1420060 | 0.862994 | 3.414505e-64 | -8.615850e-47 |
| Msa0979510 | Msa1421550 | 0.904867 | 7.829873e-80 | -8.615850e-47 |
| Msa0979510 | Msa1423460 | 0.801455 | 8.932390e-49 | -8.615850e-47 |
| Msa0979510 | Msa1431850 | 0.804182 | 2.441807e-49 | -8.615850e-47 |
| Msa0979510 | Msa1435480 | 0.835563 | 1.560472e-56 | -8.615850e-47 |
| Msa0979510 | Msa1440340 | 0.819173 | 1.334302e-52 | -8.615850e-47 |
| Msa0979510 | Msa1442630 | 0.847165 | 1.373755e-59 | -8.615850e-47 |
| Msa0979510 | Msa1446520 | 0.820547 | 6.474889e-53 | -8.615850e-47 |
| Msa0979510 | Msa1461060 | 0.827153 | 1.830976e-54 | -8.615850e-47 |
| Msa0979510 | Msa1462530 | 0.811202 | 7.878742e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979510 | MtrunA17_Chr6g0459281 | 94.052 | 269 | 16 | 0 | 1 | 269 | 1 | 269 | 0.0 | 519 |
| Msa0979510 | MtrunA17_Chr6g0459351 | 81.041 | 269 | 51 | 0 | 1 | 269 | 1 | 269 | 2.87e-162 | 451 |
| Msa0979510 | MtrunA17_Chr6g0459261 | 70.943 | 265 | 77 | 0 | 1 | 265 | 13 | 277 | 1.09e-140 | 396 |
| Msa0979510 | MtrunA17_Chr6g0459301 | 70.301 | 266 | 78 | 1 | 1 | 265 | 1 | 266 | 1.59e-137 | 388 |
| Msa0979510 | MtrunA17_Chr6g0459271 | 71.698 | 265 | 75 | 0 | 1 | 265 | 1 | 265 | 5.88e-136 | 384 |
| Msa0979510 | MtrunA17_Chr6g0459331 | 72.414 | 261 | 72 | 0 | 1 | 261 | 1 | 261 | 4.76e-132 | 374 |
| Msa0979510 | MtrunA17_Chr7g0270441 | 49.600 | 250 | 125 | 1 | 12 | 261 | 5 | 253 | 3.42e-80 | 243 |
| Msa0979510 | MtrunA17_Chr2g0324021 | 49.200 | 250 | 125 | 2 | 12 | 261 | 5 | 252 | 8.65e-77 | 234 |
| Msa0979510 | MtrunA17_Chr7g0270451 | 48.000 | 250 | 128 | 2 | 12 | 261 | 5 | 252 | 2.79e-74 | 227 |
| Msa0979510 | MtrunA17_Chr7g0266981 | 46.360 | 261 | 138 | 2 | 1 | 261 | 1 | 259 | 4.90e-74 | 227 |
| Msa0979510 | MtrunA17_Chr4g0044111 | 45.594 | 261 | 140 | 2 | 1 | 261 | 1 | 259 | 1.50e-72 | 223 |
| Msa0979510 | MtrunA17_Chr7g0266891 | 44.177 | 249 | 137 | 2 | 13 | 261 | 7 | 253 | 1.37e-67 | 210 |
| Msa0979510 | MtrunA17_Chr4g0025971 | 45.565 | 248 | 130 | 3 | 12 | 259 | 13 | 255 | 2.36e-66 | 207 |
| Msa0979510 | MtrunA17_Chr4g0026001 | 44.269 | 253 | 136 | 3 | 12 | 264 | 13 | 260 | 3.47e-65 | 204 |
| Msa0979510 | MtrunA17_Chr4g0025981 | 43.902 | 246 | 133 | 3 | 15 | 260 | 43 | 283 | 1.14e-63 | 202 |
| Msa0979510 | MtrunA17_Chr4g0044131 | 43.600 | 250 | 139 | 2 | 12 | 261 | 7 | 254 | 3.03e-63 | 199 |
| Msa0979510 | MtrunA17_Chr4g0040371 | 45.490 | 255 | 128 | 4 | 12 | 259 | 18 | 268 | 5.86e-63 | 199 |
| Msa0979510 | MtrunA17_Chr7g0244061 | 42.697 | 267 | 131 | 6 | 12 | 259 | 28 | 291 | 4.17e-61 | 195 |
| Msa0979510 | MtrunA17_Chr7g0268591 | 38.722 | 266 | 153 | 5 | 6 | 265 | 26 | 287 | 5.89e-57 | 184 |
| Msa0979510 | MtrunA17_Chr7g0252031 | 39.245 | 265 | 146 | 7 | 6 | 261 | 28 | 286 | 1.32e-54 | 178 |
| Msa0979510 | MtrunA17_Chr7g0267011 | 44.503 | 191 | 104 | 2 | 10 | 200 | 5 | 193 | 9.17e-52 | 167 |
| Msa0979510 | MtrunA17_Chr7g0267001 | 40.800 | 250 | 128 | 4 | 12 | 261 | 7 | 236 | 5.65e-50 | 165 |
| Msa0979510 | MtrunA17_Chr3g0084871 | 36.823 | 277 | 156 | 5 | 4 | 268 | 7 | 276 | 4.76e-49 | 163 |
| Msa0979510 | MtrunA17_Chr7g0266991 | 42.241 | 232 | 115 | 4 | 12 | 243 | 24 | 236 | 2.06e-47 | 158 |
| Msa0979510 | MtrunA17_Chr6g0463951 | 46.108 | 167 | 89 | 1 | 95 | 261 | 1 | 166 | 3.71e-42 | 142 |
| Msa0979510 | MtrunA17_Chr7g0270471 | 46.809 | 141 | 75 | 0 | 121 | 261 | 1 | 141 | 1.44e-39 | 135 |
| Msa0979510 | MtrunA17_Chr4g0044121 | 38.922 | 167 | 101 | 1 | 95 | 261 | 1 | 166 | 6.48e-31 | 113 |
| Msa0979510 | MtrunA17_Chr7g0259521 | 31.660 | 259 | 165 | 5 | 11 | 263 | 4 | 256 | 1.37e-30 | 115 |
| Msa0979510 | MtrunA17_Chr7g0270461 | 55.102 | 98 | 43 | 1 | 12 | 109 | 45 | 141 | 5.25e-29 | 107 |
| Msa0979510 | MtrunA17_Chr7g0272961 | 31.439 | 264 | 156 | 8 | 12 | 262 | 39 | 290 | 1.28e-28 | 110 |
| Msa0979510 | MtrunA17_Chr1g0191751 | 32.830 | 265 | 151 | 8 | 12 | 262 | 100 | 351 | 3.04e-28 | 110 |
| Msa0979510 | MtrunA17_Chr7g0259531 | 31.939 | 263 | 169 | 5 | 4 | 261 | 2 | 259 | 5.91e-28 | 108 |
| Msa0979510 | MtrunA17_Chr4g0075531 | 32.271 | 251 | 157 | 6 | 12 | 259 | 6 | 246 | 4.52e-27 | 105 |
| Msa0979510 | MtrunA17_Chr3g0142651 | 37.143 | 140 | 76 | 4 | 95 | 231 | 1 | 131 | 9.92e-24 | 93.6 |
| Msa0979510 | MtrunA17_Chr3g0122901 | 29.520 | 271 | 167 | 9 | 1 | 262 | 64 | 319 | 2.46e-23 | 97.1 |
| Msa0979510 | MtrunA17_Chr6g0459341 | 80.769 | 52 | 10 | 0 | 1 | 52 | 1 | 52 | 5.80e-22 | 87.8 |
| Msa0979510 | MtrunA17_Chr4g0074511 | 30.418 | 263 | 155 | 8 | 12 | 259 | 39 | 288 | 1.49e-21 | 91.7 |
| Msa0979510 | MtrunA17_Chr4g0028921 | 28.627 | 255 | 155 | 8 | 13 | 252 | 11 | 253 | 2.64e-20 | 87.8 |
| Msa0979510 | MtrunA17_Chr1g0182511 | 30.769 | 260 | 165 | 6 | 11 | 262 | 12 | 264 | 1.09e-19 | 85.9 |
| Msa0979510 | MtrunA17_Chr0c30g0494101 | 30.303 | 264 | 152 | 9 | 12 | 259 | 39 | 286 | 1.76e-19 | 85.9 |
| Msa0979510 | MtrunA17_Chr4g0028911 | 26.800 | 250 | 166 | 6 | 13 | 252 | 11 | 253 | 7.52e-19 | 84.0 |
| Msa0979510 | MtrunA17_Chr1g0171831 | 26.693 | 251 | 170 | 8 | 12 | 251 | 13 | 260 | 1.68e-16 | 77.0 |
| Msa0979510 | MtrunA17_Chr3g0112271 | 28.102 | 274 | 161 | 9 | 3 | 259 | 5 | 259 | 4.76e-16 | 75.9 |
| Msa0979510 | MtrunA17_Chr7g0239481 | 29.688 | 256 | 168 | 7 | 13 | 262 | 15 | 264 | 5.08e-16 | 75.9 |
| Msa0979510 | MtrunA17_Chr3g0112171 | 28.571 | 273 | 177 | 9 | 2 | 267 | 4 | 265 | 9.01e-16 | 75.1 |
| Msa0979510 | MtrunA17_Chr7g0239491 | 27.165 | 254 | 174 | 7 | 13 | 261 | 15 | 262 | 9.67e-16 | 75.1 |
| Msa0979510 | MtrunA17_Chr7g0239451 | 27.059 | 255 | 174 | 7 | 13 | 261 | 16 | 264 | 9.35e-15 | 72.4 |
| Msa0979510 | MtrunA17_Chr7g0239511 | 26.007 | 273 | 181 | 8 | 1 | 261 | 1 | 264 | 1.11e-13 | 69.3 |
| Msa0979510 | MtrunA17_Chr8g0386201 | 27.919 | 197 | 130 | 6 | 13 | 204 | 45 | 234 | 1.24e-13 | 70.1 |
| Msa0979510 | MtrunA17_Chr3g0112261 | 26.296 | 270 | 171 | 8 | 3 | 259 | 7 | 261 | 1.32e-12 | 66.2 |
| Msa0979510 | MtrunA17_Chr7g0239501 | 26.667 | 270 | 183 | 8 | 1 | 261 | 1 | 264 | 1.52e-12 | 65.9 |
| Msa0979510 | MtrunA17_Chr4g0032181 | 28.646 | 192 | 128 | 6 | 70 | 259 | 59 | 243 | 1.52e-12 | 65.9 |
| Msa0979510 | MtrunA17_Chr8g0386171 | 32.099 | 162 | 94 | 6 | 16 | 169 | 55 | 208 | 2.50e-11 | 63.2 |
| Msa0979510 | MtrunA17_Chr4g0076931 | 25.243 | 206 | 149 | 5 | 10 | 212 | 3 | 206 | 4.23e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979510 | AT2G47140.1 | 49.407 | 253 | 126 | 2 | 9 | 261 | 2 | 252 | 6.19e-81 | 244 |
| Msa0979510 | AT2G47130.1 | 48.438 | 256 | 123 | 4 | 9 | 261 | 2 | 251 | 7.90e-76 | 231 |
| Msa0979510 | AT3G29260.1 | 49.802 | 253 | 124 | 3 | 9 | 261 | 2 | 251 | 6.37e-75 | 229 |
| Msa0979510 | AT2G47120.1 | 46.640 | 253 | 131 | 4 | 9 | 261 | 2 | 250 | 2.38e-73 | 225 |
| Msa0979510 | AT3G29250.3 | 45.914 | 257 | 137 | 2 | 5 | 261 | 34 | 288 | 4.25e-72 | 223 |
| Msa0979510 | AT3G29250.2 | 46.245 | 253 | 134 | 2 | 9 | 261 | 2 | 252 | 6.34e-72 | 221 |
| Msa0979510 | AT2G47120.2 | 46.400 | 250 | 130 | 4 | 12 | 261 | 6 | 251 | 9.38e-72 | 221 |
| Msa0979510 | AT3G29250.1 | 45.560 | 259 | 137 | 3 | 5 | 261 | 34 | 290 | 4.59e-70 | 218 |
| Msa0979510 | AT3G51680.1 | 42.599 | 277 | 137 | 5 | 1 | 259 | 20 | 292 | 5.80e-61 | 195 |
| Msa0979510 | AT3G26760.1 | 40.840 | 262 | 144 | 6 | 12 | 265 | 35 | 293 | 8.50e-59 | 189 |
| Msa0979510 | AT3G26770.1 | 38.911 | 257 | 142 | 6 | 12 | 259 | 40 | 290 | 2.62e-54 | 178 |
| Msa0979510 | AT1G52340.1 | 40.000 | 260 | 144 | 5 | 12 | 261 | 17 | 274 | 3.27e-51 | 169 |
| Msa0979510 | AT4G03140.1 | 38.039 | 255 | 150 | 4 | 12 | 261 | 77 | 328 | 5.37e-51 | 171 |
| Msa0979510 | AT3G42960.1 | 40.684 | 263 | 142 | 6 | 8 | 261 | 3 | 260 | 4.65e-50 | 166 |
| Msa0979510 | AT5G18210.1 | 32.946 | 258 | 160 | 5 | 13 | 262 | 8 | 260 | 2.32e-29 | 112 |
| Msa0979510 | AT2G47150.1 | 33.466 | 251 | 108 | 9 | 13 | 261 | 1 | 194 | 3.37e-27 | 104 |
| Msa0979510 | AT3G03980.1 | 31.868 | 273 | 165 | 6 | 4 | 262 | 5 | 270 | 3.51e-27 | 106 |
| Msa0979510 | AT3G04000.1 | 32.967 | 273 | 164 | 6 | 1 | 259 | 1 | 268 | 4.14e-27 | 106 |
| Msa0979510 | AT5G18210.2 | 34.583 | 240 | 144 | 5 | 13 | 244 | 8 | 242 | 5.34e-27 | 106 |
| Msa0979510 | AT1G54870.1 | 34.000 | 200 | 120 | 4 | 12 | 203 | 81 | 276 | 1.22e-26 | 106 |
| Msa0979510 | AT1G54870.2 | 34.000 | 200 | 120 | 4 | 12 | 203 | 83 | 278 | 1.36e-26 | 106 |
| Msa0979510 | AT3G05260.1 | 34.434 | 212 | 124 | 5 | 2 | 203 | 24 | 230 | 1.56e-26 | 105 |
| Msa0979510 | AT4G13180.1 | 26.882 | 279 | 170 | 8 | 1 | 262 | 1 | 262 | 5.65e-22 | 92.4 |
| Msa0979510 | AT4G05530.1 | 31.727 | 249 | 161 | 6 | 12 | 259 | 8 | 248 | 1.22e-21 | 91.3 |
| Msa0979510 | AT1G63380.3 | 27.413 | 259 | 166 | 9 | 13 | 258 | 15 | 264 | 4.55e-19 | 84.7 |
| Msa0979510 | AT1G24360.1 | 26.459 | 257 | 166 | 7 | 12 | 259 | 73 | 315 | 5.14e-19 | 85.5 |
| Msa0979510 | AT1G63380.1 | 27.413 | 259 | 166 | 9 | 13 | 258 | 17 | 266 | 5.23e-19 | 84.7 |
| Msa0979510 | AT1G63380.4 | 27.413 | 259 | 166 | 9 | 13 | 258 | 19 | 268 | 6.58e-19 | 84.3 |
| Msa0979510 | AT1G63380.2 | 27.413 | 259 | 166 | 9 | 13 | 258 | 22 | 271 | 7.66e-19 | 84.3 |
| Msa0979510 | AT1G62610.4 | 27.165 | 254 | 173 | 7 | 13 | 258 | 19 | 268 | 3.19e-18 | 82.4 |
| Msa0979510 | AT1G62610.3 | 27.016 | 248 | 169 | 7 | 13 | 252 | 15 | 258 | 3.44e-18 | 82.4 |
| Msa0979510 | AT1G62610.2 | 27.016 | 248 | 169 | 7 | 13 | 252 | 13 | 256 | 3.52e-18 | 82.4 |
| Msa0979510 | AT1G62610.1 | 27.016 | 248 | 169 | 7 | 13 | 252 | 14 | 257 | 3.71e-18 | 82.4 |
| Msa0979510 | AT3G46170.1 | 25.483 | 259 | 172 | 7 | 12 | 258 | 25 | 274 | 1.53e-17 | 80.9 |
| Msa0979510 | AT5G06060.1 | 27.899 | 276 | 153 | 8 | 7 | 261 | 3 | 253 | 4.28e-17 | 79.3 |
| Msa0979510 | AT3G47350.1 | 25.381 | 197 | 135 | 5 | 13 | 204 | 44 | 233 | 3.44e-16 | 77.4 |
| Msa0979510 | AT3G47350.2 | 25.381 | 197 | 135 | 5 | 13 | 204 | 44 | 233 | 5.21e-16 | 77.0 |
| Msa0979510 | AT2G29340.2 | 28.175 | 252 | 167 | 7 | 13 | 259 | 7 | 249 | 6.42e-16 | 75.9 |
| Msa0979510 | AT3G55310.1 | 25.769 | 260 | 168 | 8 | 13 | 258 | 17 | 265 | 7.87e-16 | 75.9 |
| Msa0979510 | AT2G29340.1 | 28.175 | 252 | 167 | 7 | 13 | 259 | 7 | 249 | 9.72e-16 | 75.9 |
| Msa0979510 | AT3G55290.2 | 25.194 | 258 | 172 | 7 | 13 | 258 | 17 | 265 | 1.95e-15 | 74.7 |
| Msa0979510 | AT3G55290.1 | 25.194 | 258 | 172 | 7 | 13 | 258 | 18 | 266 | 1.96e-15 | 74.7 |
| Msa0979510 | AT3G47360.1 | 28.643 | 199 | 126 | 8 | 13 | 204 | 45 | 234 | 2.41e-15 | 74.7 |
| Msa0979510 | AT2G29150.1 | 29.811 | 265 | 165 | 10 | 3 | 259 | 6 | 257 | 3.13e-15 | 73.9 |
| Msa0979510 | AT5G50770.1 | 30.481 | 187 | 122 | 5 | 13 | 196 | 45 | 226 | 3.38e-15 | 74.7 |
| Msa0979510 | AT2G30670.1 | 26.378 | 254 | 169 | 7 | 13 | 259 | 7 | 249 | 3.47e-15 | 73.9 |
| Msa0979510 | AT5G50590.2 | 28.492 | 179 | 115 | 5 | 12 | 184 | 44 | 215 | 3.95e-15 | 73.6 |
| Msa0979510 | AT5G50690.2 | 28.492 | 179 | 115 | 5 | 12 | 184 | 44 | 215 | 3.95e-15 | 73.6 |
| Msa0979510 | AT2G29310.1 | 27.239 | 268 | 163 | 10 | 13 | 266 | 7 | 256 | 5.21e-15 | 73.2 |
| Msa0979510 | AT2G29260.1 | 28.740 | 254 | 163 | 8 | 13 | 259 | 68 | 310 | 7.32e-15 | 73.6 |
| Msa0979510 | AT5G50590.1 | 29.189 | 185 | 106 | 5 | 12 | 184 | 44 | 215 | 7.81e-15 | 73.2 |
| Msa0979510 | AT5G50690.1 | 29.189 | 185 | 106 | 5 | 12 | 184 | 44 | 215 | 7.81e-15 | 73.2 |
| Msa0979510 | AT2G29370.1 | 27.132 | 258 | 180 | 6 | 13 | 268 | 16 | 267 | 1.25e-14 | 72.4 |
| Msa0979510 | AT2G29360.1 | 27.099 | 262 | 175 | 7 | 13 | 268 | 16 | 267 | 1.42e-14 | 72.4 |
| Msa0979510 | AT5G50700.1 | 24.742 | 194 | 140 | 4 | 13 | 204 | 45 | 234 | 2.32e-14 | 72.4 |
| Msa0979510 | AT5G50600.1 | 24.742 | 194 | 140 | 4 | 13 | 204 | 45 | 234 | 2.32e-14 | 72.4 |
| Msa0979510 | AT2G29300.2 | 28.679 | 265 | 158 | 11 | 13 | 263 | 7 | 254 | 3.48e-14 | 71.2 |
| Msa0979510 | AT2G29300.1 | 29.213 | 267 | 157 | 12 | 13 | 264 | 7 | 256 | 3.71e-14 | 70.9 |
| Msa0979510 | AT4G10020.1 | 28.652 | 178 | 108 | 6 | 16 | 184 | 50 | 217 | 1.19e-13 | 70.5 |
| Msa0979510 | AT2G29320.1 | 28.352 | 261 | 156 | 11 | 13 | 259 | 13 | 256 | 2.36e-13 | 68.9 |
| Msa0979510 | AT2G29340.3 | 28.856 | 201 | 132 | 6 | 13 | 208 | 7 | 201 | 2.40e-13 | 67.8 |
| Msa0979510 | AT2G29340.4 | 28.856 | 201 | 132 | 6 | 13 | 208 | 7 | 201 | 2.40e-13 | 67.8 |
| Msa0979510 | AT2G17845.1 | 26.437 | 261 | 168 | 9 | 13 | 258 | 47 | 298 | 4.98e-13 | 68.2 |
| Msa0979510 | AT2G29310.3 | 29.048 | 210 | 120 | 8 | 13 | 208 | 7 | 201 | 1.56e-12 | 65.5 |
| Msa0979510 | AT1G07450.1 | 27.692 | 260 | 169 | 11 | 9 | 261 | 4 | 251 | 4.71e-12 | 65.1 |
| Msa0979510 | AT2G29290.2 | 26.800 | 250 | 173 | 6 | 13 | 259 | 7 | 249 | 5.10e-12 | 64.7 |
| Msa0979510 | AT1G07440.1 | 27.490 | 251 | 169 | 7 | 13 | 259 | 12 | 253 | 1.72e-11 | 63.5 |
| Msa0979510 | AT3G47350.3 | 30.189 | 106 | 68 | 2 | 13 | 116 | 44 | 145 | 3.81e-11 | 62.4 |
| Msa0979510 | AT2G29350.2 | 28.358 | 201 | 135 | 6 | 8 | 204 | 10 | 205 | 6.79e-11 | 61.2 |
Find 77 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATCTGATCAGACTATTT+TGG | 0.219303 | 6_4:-16759914 | Msa0979510:CDS |
| ATATCGAAGCATGCAATAAT+AGG | 0.242360 | 6_4:-16759721 | Msa0979510:CDS |
| CATCTACTAACAACGGTCTT+AGG | 0.262828 | 6_4:-16760866 | Msa0979510:CDS |
| CCATTGACTATGAGATTGTT+AGG | 0.292303 | 6_4:-16759619 | Msa0979510:CDS |
| GTGGATGGCAGCTATGTTTA+TGG | 0.299988 | 6_4:-16759454 | Msa0979510:CDS |
| GGCAGATGCTGTGTTGTTCT+TGG | 0.317529 | 6_4:-16759518 | Msa0979510:CDS |
| CAATCAACGGTCAATGCTTA+TGG | 0.322095 | 6_4:-16760633 | Msa0979510:CDS |
| TTAAACTATATCATGGGCTT+TGG | 0.347375 | 6_4:-16759280 | Msa0979510:three_prime_UTR |
| CTGCATCCATTGGCGGCAAC+AGG | 0.359068 | 6_4:-16760710 | Msa0979510:CDS |
| GATATTATGTTTAGCAATGC+TGG | 0.362324 | 6_4:-16759946 | Msa0979510:CDS |
| GCCAATGCCACTGGCACCTC+CGG | 0.395916 | 6_4:+16760818 | None:intergenic |
| ACTTCTAGGTGGAGTGTTAG+AGG | 0.396791 | 6_4:-16759349 | Msa0979510:three_prime_UTR |
| AACTTGCAAAATACGGGATA+AGG | 0.405544 | 6_4:-16759675 | Msa0979510:CDS |
| CGTCTCTTTGCCAATGCCAC+TGG | 0.416288 | 6_4:+16760809 | None:intergenic |
| CTTATATTGAATTTATTTGA+AGG | 0.428350 | 6_4:-16759389 | Msa0979510:three_prime_UTR |
| AATGGTGTTGCTAATCCATT+TGG | 0.430166 | 6_4:+16759637 | None:intergenic |
| CACCATGCGTGCACCTTGAT+CGG | 0.442941 | 6_4:+16760773 | None:intergenic |
| ACCGGAGGTGCCAGTGGCAT+TGG | 0.446047 | 6_4:-16760819 | Msa0979510:CDS |
| CAATGGTGGAGGGGCACGTG+AGG | 0.446854 | 6_4:-16759810 | Msa0979510:CDS |
| GGTGGAGTGTTAGAGGTGTA+TGG | 0.447683 | 6_4:-16759342 | Msa0979510:three_prime_UTR |
| TATCGAAGCATGCAATAATA+GGG | 0.448557 | 6_4:-16759720 | Msa0979510:CDS |
| GTGAATTGTGTCTCGCCAAA+TGG | 0.451124 | 6_4:-16759652 | Msa0979510:CDS |
| AGTGTGCAACTTGCAAAATA+CGG | 0.458623 | 6_4:-16759682 | Msa0979510:CDS |
| AATCGAGTGGCTGCATCCAT+TGG | 0.459458 | 6_4:-16760720 | Msa0979510:CDS |
| CGCAGCGCGTGCAATGGTGG+AGG | 0.464320 | 6_4:-16759821 | Msa0979510:CDS |
| GTGTGCACAGCGAGCGTCCT+GGG | 0.473161 | 6_4:-16759778 | Msa0979510:CDS |
| GCGCATCTCTTTGCCGATCA+AGG | 0.473582 | 6_4:-16760786 | Msa0979510:CDS |
| ACTTGCAAAATACGGGATAA+GGG | 0.476659 | 6_4:-16759674 | Msa0979510:CDS |
| GGCCTTGATCTTCGTGTGGA+TGG | 0.478190 | 6_4:-16759469 | Msa0979510:CDS |
| GCTGACATTCAAGACGAGTT+GGG | 0.480846 | 6_4:-16760744 | Msa0979510:CDS |
| CATTGACTATGAGATTGTTA+GGG | 0.487258 | 6_4:-16759618 | Msa0979510:CDS |
| TGCTGACATTCAAGACGAGT+TGG | 0.487544 | 6_4:-16760745 | Msa0979510:CDS |
| GGTGACGATGGCTACTTTGC+CGG | 0.490347 | 6_4:+16760839 | None:intergenic |
| TGTGTGCACAGCGAGCGTCC+TGG | 0.491477 | 6_4:-16759779 | Msa0979510:CDS |
| GGTGCTCCTGTTGCCGCCAA+TGG | 0.495505 | 6_4:+16760704 | None:intergenic |
| GAATGTTAACTGAAAACAAA+TGG | 0.496555 | 6_4:+16759869 | None:intergenic |
| TTATGAACAAAACAAGAGGT+TGG | 0.516866 | 6_4:-16759569 | Msa0979510:CDS |
| CCTAACAATCTCATAGTCAA+TGG | 0.517810 | 6_4:+16759619 | None:intergenic |
| ATATTATGTTTAGCAATGCT+GGG | 0.517928 | 6_4:-16759945 | Msa0979510:CDS |
| AACAACGGTCTTAGGTTAGC+CGG | 0.520911 | 6_4:-16760858 | Msa0979510:CDS |
| AACGGTCAATGCTTATGGAC+AGG | 0.524985 | 6_4:-16760628 | Msa0979510:intron |
| AATGGTGGAGGGGCACGTGA+GGG | 0.527778 | 6_4:-16759809 | Msa0979510:CDS |
| ATGGTGGAGGGGCACGTGAG+GGG | 0.528282 | 6_4:-16759808 | Msa0979510:CDS |
| TCCAAAATAGTCTGATCAGA+TGG | 0.534810 | 6_4:+16759913 | None:intergenic |
| GGCAAAGTAGCCATCGTCAC+CGG | 0.538495 | 6_4:-16760837 | Msa0979510:CDS |
| GCAGCGCGTGCAATGGTGGA+GGG | 0.539737 | 6_4:-16759820 | Msa0979510:CDS |
| GTGTGCAACTTGCAAAATAC+GGG | 0.541723 | 6_4:-16759681 | Msa0979510:CDS |
| AAACAAGAGGTTGGAAGGAG+TGG | 0.542973 | 6_4:-16759560 | Msa0979510:CDS |
| TGCCGATCAAGGTGCACGCA+TGG | 0.543365 | 6_4:-16760775 | Msa0979510:CDS |
| CGAGTGGCTGCATCCATTGG+CGG | 0.543859 | 6_4:-16760717 | Msa0979510:CDS |
| TGCCATCCACACGAAGATCA+AGG | 0.546878 | 6_4:+16759467 | None:intergenic |
| AGTGAATCTGACTTTGTCAC+TGG | 0.549507 | 6_4:-16759490 | Msa0979510:CDS |
| GAACAAAACAAGAGGTTGGA+AGG | 0.555611 | 6_4:-16759565 | Msa0979510:CDS |
| GAAATACGCAGCGCGTGCAA+TGG | 0.556343 | 6_4:-16759827 | Msa0979510:CDS |
| CACTGGCCTTGATCTTCGTG+TGG | 0.560496 | 6_4:-16759473 | Msa0979510:CDS |
| CAGTGGCATTGGCAAAGAGA+CGG | 0.560685 | 6_4:-16760808 | Msa0979510:CDS |
| ACTGGCACCTCCGGTGACGA+TGG | 0.561243 | 6_4:+16760827 | None:intergenic |
| ATCGTCACCGGAGGTGCCAG+TGG | 0.562053 | 6_4:-16760825 | Msa0979510:CDS |
| TGTTAGAGGTGTATGGAGTG+AGG | 0.562799 | 6_4:-16759335 | Msa0979510:three_prime_UTR |
| ATACGCAGCGCGTGCAATGG+TGG | 0.568872 | 6_4:-16759824 | Msa0979510:CDS |
| TGATTATAAAAGGCTAGCTA+TGG | 0.571459 | 6_4:-16760926 | None:intergenic |
| TCAAGACACCTTCGCTACCC+AGG | 0.581633 | 6_4:+16759761 | None:intergenic |
| GCGAGCGTCCTGGGTAGCGA+AGG | 0.582173 | 6_4:-16759769 | Msa0979510:CDS |
| TGCTATGTCACAATGGATGA+AGG | 0.590504 | 6_4:+16760683 | None:intergenic |
| GTTAACTGAAAACAAATGGT+CGG | 0.597515 | 6_4:+16759873 | None:intergenic |
| CAGCGCGTGCAATGGTGGAG+GGG | 0.604964 | 6_4:-16759819 | Msa0979510:CDS |
| AGACGAGTTGGGCAATCGAG+TGG | 0.629056 | 6_4:-16760733 | Msa0979510:CDS |
| TGATTTATGAACAAAACAAG+AGG | 0.629161 | 6_4:-16759573 | Msa0979510:CDS |
| CTTCATTTGCTATGTCACAA+TGG | 0.633784 | 6_4:+16760676 | None:intergenic |
| AAAGTAGCCATCGTCACCGG+AGG | 0.651370 | 6_4:-16760834 | Msa0979510:CDS |
| AAATTCCTCACACTTCTAGG+TGG | 0.659212 | 6_4:-16759360 | Msa0979510:three_prime_UTR |
| ATTGACTATGAGATTGTTAG+GGG | 0.661906 | 6_4:-16759617 | Msa0979510:CDS |
| TGGGTAGCGAAGGTGTCTTG+AGG | 0.664401 | 6_4:-16759759 | Msa0979510:CDS |
| CGATCAAGGTGCACGCATGG+TGG | 0.678300 | 6_4:-16760772 | Msa0979510:CDS |
| GGTTCTTAACACTAAACATG+TGG | 0.680290 | 6_4:-16759539 | Msa0979510:CDS |
| ACACTCCACCTAGAAGTGTG+AGG | 0.688942 | 6_4:+16759355 | None:intergenic |
| GAAGCTTCATCTACTAACAA+CGG | 0.689074 | 6_4:-16760873 | Msa0979510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATTAAATTTTTTTTTAT+AGG | - | chr6_4:16759966-16759985 | Msa0979510:intron | 0.0% |
| !!! | AAATTAAATTTTTTTTTATA+GGG | - | chr6_4:16759967-16759986 | Msa0979510:intron | 0.0% |
| !! | AAAAATTATATTAAATAAAT+GGG | + | chr6_4:16760851-16760870 | None:intergenic | 0.0% |
| !! | AAAAAATTATATTAAATAAA+TGG | + | chr6_4:16760852-16760871 | None:intergenic | 0.0% |
| !!! | TAAATTAAATTTTTTTTTAT+AGG | - | chr6_4:16759966-16759985 | Msa0979510:intron | 0.0% |
| !!! | AAATTAAATTTTTTTTTATA+GGG | - | chr6_4:16759967-16759986 | Msa0979510:intron | 0.0% |
| !! | AAAAATTATATTAAATAAAT+GGG | + | chr6_4:16760851-16760870 | None:intergenic | 0.0% |
| !! | AAAAAATTATATTAAATAAA+TGG | + | chr6_4:16760852-16760871 | None:intergenic | 0.0% |
| !! | ATAAAAATTAAACTATATCA+TGG | - | chr6_4:16760817-16760836 | Msa0979510:CDS | 10.0% |
| !! | TAAAAATTAAACTATATCAT+GGG | - | chr6_4:16760818-16760837 | Msa0979510:CDS | 10.0% |
| !! | ATAAAAATTAAACTATATCA+TGG | - | chr6_4:16760817-16760836 | Msa0979510:CDS | 10.0% |
| !! | TAAAAATTAAACTATATCAT+GGG | - | chr6_4:16760818-16760837 | Msa0979510:CDS | 10.0% |
| !!! | TTTTCGTAATGTATAAAAAA+TGG | + | chr6_4:16759206-16759225 | None:intergenic | 15.0% |
| !!! | TTTTTTATACATTACGAAAA+TGG | - | chr6_4:16759206-16759225 | Msa0979510:three_prime_UTR | 15.0% |
| !! | AGGTAAAATAAAAATTAACT+AGG | - | chr6_4:16759496-16759515 | Msa0979510:CDS | 15.0% |
| !! | GGTAAAATAAAAATTAACTA+GGG | - | chr6_4:16759497-16759516 | Msa0979510:CDS | 15.0% |
| !! | ACATTATAATGTAGAAATTA+TGG | + | chr6_4:16759815-16759834 | None:intergenic | 15.0% |
| !!! | TAAAGTCTTATATAGTAAAT+GGG | + | chr6_4:16760011-16760030 | None:intergenic | 15.0% |
| !!! | ATAAAGTCTTATATAGTAAA+TGG | + | chr6_4:16760012-16760031 | None:intergenic | 15.0% |
| !!! | AAAGAAAAAGTTGTTTTTTA+GGG | + | chr6_4:16760121-16760140 | None:intergenic | 15.0% |
| !! | CTTATATTGAATTTATTTGA+AGG | - | chr6_4:16760715-16760734 | Msa0979510:CDS | 15.0% |
| !!! | TTTTCGTAATGTATAAAAAA+TGG | + | chr6_4:16759206-16759225 | None:intergenic | 15.0% |
| !!! | TTTTTTATACATTACGAAAA+TGG | - | chr6_4:16759206-16759225 | Msa0979510:three_prime_UTR | 15.0% |
| !! | AGGTAAAATAAAAATTAACT+AGG | - | chr6_4:16759496-16759515 | Msa0979510:CDS | 15.0% |
| !! | GGTAAAATAAAAATTAACTA+GGG | - | chr6_4:16759497-16759516 | Msa0979510:CDS | 15.0% |
| !! | ACATTATAATGTAGAAATTA+TGG | + | chr6_4:16759815-16759834 | None:intergenic | 15.0% |
| !!! | TAAAGTCTTATATAGTAAAT+GGG | + | chr6_4:16760011-16760030 | None:intergenic | 15.0% |
| !!! | ATAAAGTCTTATATAGTAAA+TGG | + | chr6_4:16760012-16760031 | None:intergenic | 15.0% |
| !!! | AAAGAAAAAGTTGTTTTTTA+GGG | + | chr6_4:16760121-16760140 | None:intergenic | 15.0% |
| !! | CTTATATTGAATTTATTTGA+AGG | - | chr6_4:16760715-16760734 | Msa0979510:CDS | 15.0% |
| !! | AAAAAATCTCATTCAATCAA+CGG | - | chr6_4:16759458-16759477 | Msa0979510:CDS | 20.0% |
| !!! | TGAAGAATTTGAAGTTTTTT+GGG | + | chr6_4:16759665-16759684 | None:intergenic | 20.0% |
| !!! | TTGAAGAATTTGAAGTTTTT+TGG | + | chr6_4:16759666-16759685 | None:intergenic | 20.0% |
| !!! | AAAGTCTTATATAGTAAATG+GGG | + | chr6_4:16760010-16760029 | None:intergenic | 20.0% |
| !!! | GAAAGAAAAAGTTGTTTTTT+AGG | + | chr6_4:16760122-16760141 | None:intergenic | 20.0% |
| !! | AAAAAATCTCATTCAATCAA+CGG | - | chr6_4:16759458-16759477 | Msa0979510:CDS | 20.0% |
| !!! | TGAAGAATTTGAAGTTTTTT+GGG | + | chr6_4:16759665-16759684 | None:intergenic | 20.0% |
| !!! | TTGAAGAATTTGAAGTTTTT+TGG | + | chr6_4:16759666-16759685 | None:intergenic | 20.0% |
| !!! | AAAGTCTTATATAGTAAATG+GGG | + | chr6_4:16760010-16760029 | None:intergenic | 20.0% |
| !!! | GAAAGAAAAAGTTGTTTTTT+AGG | + | chr6_4:16760122-16760141 | None:intergenic | 20.0% |
| ! | CAAAATTTCATAATACACGT+AGG | + | chr6_4:16759541-16759560 | None:intergenic | 25.0% |
| !!! | GTGAATGAACTTGTTATAAT+GGG | + | chr6_4:16759717-16759736 | None:intergenic | 25.0% |
| !!! | TGTGAATGAACTTGTTATAA+TGG | + | chr6_4:16759718-16759737 | None:intergenic | 25.0% |
| ! | ATATTATGTTTAGCAATGCT+GGG | - | chr6_4:16760159-16760178 | Msa0979510:intron | 25.0% |
| ! | GAATGTTAACTGAAAACAAA+TGG | + | chr6_4:16760238-16760257 | None:intergenic | 25.0% |
| ! | TGATTTATGAACAAAACAAG+AGG | - | chr6_4:16760531-16760550 | Msa0979510:intron | 25.0% |
| ! | CAAAATTTCATAATACACGT+AGG | + | chr6_4:16759541-16759560 | None:intergenic | 25.0% |
| !!! | GTGAATGAACTTGTTATAAT+GGG | + | chr6_4:16759717-16759736 | None:intergenic | 25.0% |
| !!! | TGTGAATGAACTTGTTATAA+TGG | + | chr6_4:16759718-16759737 | None:intergenic | 25.0% |
| ! | ATATTATGTTTAGCAATGCT+GGG | - | chr6_4:16760159-16760178 | Msa0979510:intron | 25.0% |
| ! | GAATGTTAACTGAAAACAAA+TGG | + | chr6_4:16760238-16760257 | None:intergenic | 25.0% |
| ! | TGATTTATGAACAAAACAAG+AGG | - | chr6_4:16760531-16760550 | Msa0979510:intron | 25.0% |
| ! | TTTTCTTTCTTTTCCACAAC+AGG | - | chr6_4:16760133-16760152 | Msa0979510:intron | 30.0% |
| AACATAATATCTACCTGTTG+TGG | + | chr6_4:16760149-16760168 | None:intergenic | 30.0% | |
| GATATTATGTTTAGCAATGC+TGG | - | chr6_4:16760158-16760177 | Msa0979510:intron | 30.0% | |
| GTTAACTGAAAACAAATGGT+CGG | + | chr6_4:16760234-16760253 | None:intergenic | 30.0% | |
| ! | TTGTTTTCAGTTAACATTCG+AGG | - | chr6_4:16760239-16760258 | Msa0979510:intron | 30.0% |
| ATATCGAAGCATGCAATAAT+AGG | - | chr6_4:16760383-16760402 | Msa0979510:intron | 30.0% | |
| TATCGAAGCATGCAATAATA+GGG | - | chr6_4:16760384-16760403 | Msa0979510:intron | 30.0% | |
| ! | CATTGACTATGAGATTGTTA+GGG | - | chr6_4:16760486-16760505 | Msa0979510:intron | 30.0% |
| ATTGACTATGAGATTGTTAG+GGG | - | chr6_4:16760487-16760506 | Msa0979510:intron | 30.0% | |
| TTATGAACAAAACAAGAGGT+TGG | - | chr6_4:16760535-16760554 | Msa0979510:intron | 30.0% | |
| AAAAAATTCCTCACACTTCT+AGG | - | chr6_4:16760741-16760760 | Msa0979510:CDS | 30.0% | |
| TTAAACTATATCATGGGCTT+TGG | - | chr6_4:16760824-16760843 | Msa0979510:CDS | 30.0% | |
| ! | TTTTCTTTCTTTTCCACAAC+AGG | - | chr6_4:16760133-16760152 | Msa0979510:intron | 30.0% |
| AACATAATATCTACCTGTTG+TGG | + | chr6_4:16760149-16760168 | None:intergenic | 30.0% | |
| GATATTATGTTTAGCAATGC+TGG | - | chr6_4:16760158-16760177 | Msa0979510:intron | 30.0% | |
| GTTAACTGAAAACAAATGGT+CGG | + | chr6_4:16760234-16760253 | None:intergenic | 30.0% | |
| ! | TTGTTTTCAGTTAACATTCG+AGG | - | chr6_4:16760239-16760258 | Msa0979510:intron | 30.0% |
| ATATCGAAGCATGCAATAAT+AGG | - | chr6_4:16760383-16760402 | Msa0979510:intron | 30.0% | |
| TATCGAAGCATGCAATAATA+GGG | - | chr6_4:16760384-16760403 | Msa0979510:intron | 30.0% | |
| ! | CATTGACTATGAGATTGTTA+GGG | - | chr6_4:16760486-16760505 | Msa0979510:intron | 30.0% |
| ATTGACTATGAGATTGTTAG+GGG | - | chr6_4:16760487-16760506 | Msa0979510:intron | 30.0% | |
| TTATGAACAAAACAAGAGGT+TGG | - | chr6_4:16760535-16760554 | Msa0979510:intron | 30.0% | |
| AAAAAATTCCTCACACTTCT+AGG | - | chr6_4:16760741-16760760 | Msa0979510:CDS | 30.0% | |
| TTAAACTATATCATGGGCTT+TGG | - | chr6_4:16760824-16760843 | Msa0979510:CDS | 30.0% | |
| GAAGCTTCATCTACTAACAA+CGG | - | chr6_4:16759231-16759250 | Msa0979510:three_prime_UTR | 35.0% | |
| !! | CTTCATTTGCTATGTCACAA+TGG | + | chr6_4:16759431-16759450 | None:intergenic | 35.0% |
| TAACTTTAATCAGTCTCTGC+TGG | + | chr6_4:16759884-16759903 | None:intergenic | 35.0% | |
| ! | TCCATCTGATCAGACTATTT+TGG | - | chr6_4:16760190-16760209 | Msa0979510:intron | 35.0% |
| TCCAAAATAGTCTGATCAGA+TGG | + | chr6_4:16760194-16760213 | None:intergenic | 35.0% | |
| AGTGTGCAACTTGCAAAATA+CGG | - | chr6_4:16760422-16760441 | Msa0979510:intron | 35.0% | |
| AACTTGCAAAATACGGGATA+AGG | - | chr6_4:16760429-16760448 | Msa0979510:intron | 35.0% | |
| ACTTGCAAAATACGGGATAA+GGG | - | chr6_4:16760430-16760449 | Msa0979510:intron | 35.0% | |
| !! | AATGGTGTTGCTAATCCATT+TGG | + | chr6_4:16760470-16760489 | None:intergenic | 35.0% |
| CCTAACAATCTCATAGTCAA+TGG | + | chr6_4:16760488-16760507 | None:intergenic | 35.0% | |
| ! | CCATTGACTATGAGATTGTT+AGG | - | chr6_4:16760485-16760504 | Msa0979510:intron | 35.0% |
| GGTTCTTAACACTAAACATG+TGG | - | chr6_4:16760565-16760584 | Msa0979510:intron | 35.0% | |
| GAAGCTTCATCTACTAACAA+CGG | - | chr6_4:16759231-16759250 | Msa0979510:three_prime_UTR | 35.0% | |
| !! | CTTCATTTGCTATGTCACAA+TGG | + | chr6_4:16759431-16759450 | None:intergenic | 35.0% |
| TAACTTTAATCAGTCTCTGC+TGG | + | chr6_4:16759884-16759903 | None:intergenic | 35.0% | |
| ! | TCCATCTGATCAGACTATTT+TGG | - | chr6_4:16760190-16760209 | Msa0979510:intron | 35.0% |
| TCCAAAATAGTCTGATCAGA+TGG | + | chr6_4:16760194-16760213 | None:intergenic | 35.0% | |
| AGTGTGCAACTTGCAAAATA+CGG | - | chr6_4:16760422-16760441 | Msa0979510:intron | 35.0% | |
| AACTTGCAAAATACGGGATA+AGG | - | chr6_4:16760429-16760448 | Msa0979510:intron | 35.0% | |
| ACTTGCAAAATACGGGATAA+GGG | - | chr6_4:16760430-16760449 | Msa0979510:intron | 35.0% | |
| !! | AATGGTGTTGCTAATCCATT+TGG | + | chr6_4:16760470-16760489 | None:intergenic | 35.0% |
| CCTAACAATCTCATAGTCAA+TGG | + | chr6_4:16760488-16760507 | None:intergenic | 35.0% | |
| ! | CCATTGACTATGAGATTGTT+AGG | - | chr6_4:16760485-16760504 | Msa0979510:intron | 35.0% |
| GGTTCTTAACACTAAACATG+TGG | - | chr6_4:16760565-16760584 | Msa0979510:intron | 35.0% | |
| CATCTACTAACAACGGTCTT+AGG | - | chr6_4:16759238-16759257 | Msa0979510:three_prime_UTR | 40.0% | |
| TGCTATGTCACAATGGATGA+AGG | + | chr6_4:16759424-16759443 | None:intergenic | 40.0% | |
| CAATCAACGGTCAATGCTTA+TGG | - | chr6_4:16759471-16759490 | Msa0979510:CDS | 40.0% | |
| GTGTGCAACTTGCAAAATAC+GGG | - | chr6_4:16760423-16760442 | Msa0979510:intron | 40.0% | |
| GAACAAAACAAGAGGTTGGA+AGG | - | chr6_4:16760539-16760558 | Msa0979510:intron | 40.0% | |
| AGTGAATCTGACTTTGTCAC+TGG | - | chr6_4:16760614-16760633 | Msa0979510:intron | 40.0% | |
| AAATTCCTCACACTTCTAGG+TGG | - | chr6_4:16760744-16760763 | Msa0979510:CDS | 40.0% | |
| AAAATGGAACCATAGCTAGC+AGG | + | chr6_4:16759190-16759209 | None:intergenic | 40.0% | |
| CATCTACTAACAACGGTCTT+AGG | - | chr6_4:16759238-16759257 | Msa0979510:three_prime_UTR | 40.0% | |
| TGCTATGTCACAATGGATGA+AGG | + | chr6_4:16759424-16759443 | None:intergenic | 40.0% | |
| CAATCAACGGTCAATGCTTA+TGG | - | chr6_4:16759471-16759490 | Msa0979510:CDS | 40.0% | |
| GTGTGCAACTTGCAAAATAC+GGG | - | chr6_4:16760423-16760442 | Msa0979510:intron | 40.0% | |
| GAACAAAACAAGAGGTTGGA+AGG | - | chr6_4:16760539-16760558 | Msa0979510:intron | 40.0% | |
| AGTGAATCTGACTTTGTCAC+TGG | - | chr6_4:16760614-16760633 | Msa0979510:intron | 40.0% | |
| AAATTCCTCACACTTCTAGG+TGG | - | chr6_4:16760744-16760763 | Msa0979510:CDS | 40.0% | |
| AACAACGGTCTTAGGTTAGC+CGG | - | chr6_4:16759246-16759265 | Msa0979510:three_prime_UTR | 45.0% | |
| TGCTGACATTCAAGACGAGT+TGG | - | chr6_4:16759359-16759378 | Msa0979510:three_prime_UTR | 45.0% | |
| GCTGACATTCAAGACGAGTT+GGG | - | chr6_4:16759360-16759379 | Msa0979510:three_prime_UTR | 45.0% | |
| AACGGTCAATGCTTATGGAC+AGG | - | chr6_4:16759476-16759495 | Msa0979510:CDS | 45.0% | |
| GTGAATTGTGTCTCGCCAAA+TGG | - | chr6_4:16760452-16760471 | Msa0979510:intron | 45.0% | |
| AAACAAGAGGTTGGAAGGAG+TGG | - | chr6_4:16760544-16760563 | Msa0979510:intron | 45.0% | |
| GTGGATGGCAGCTATGTTTA+TGG | - | chr6_4:16760650-16760669 | Msa0979510:CDS | 45.0% | |
| ! | ACTTCTAGGTGGAGTGTTAG+AGG | - | chr6_4:16760755-16760774 | Msa0979510:CDS | 45.0% |
| ! | TGTTAGAGGTGTATGGAGTG+AGG | - | chr6_4:16760769-16760788 | Msa0979510:CDS | 45.0% |
| AACAACGGTCTTAGGTTAGC+CGG | - | chr6_4:16759246-16759265 | Msa0979510:three_prime_UTR | 45.0% | |
| TGCTGACATTCAAGACGAGT+TGG | - | chr6_4:16759359-16759378 | Msa0979510:three_prime_UTR | 45.0% | |
| GCTGACATTCAAGACGAGTT+GGG | - | chr6_4:16759360-16759379 | Msa0979510:three_prime_UTR | 45.0% | |
| AACGGTCAATGCTTATGGAC+AGG | - | chr6_4:16759476-16759495 | Msa0979510:CDS | 45.0% | |
| GTGAATTGTGTCTCGCCAAA+TGG | - | chr6_4:16760452-16760471 | Msa0979510:intron | 45.0% | |
| AAACAAGAGGTTGGAAGGAG+TGG | - | chr6_4:16760544-16760563 | Msa0979510:intron | 45.0% | |
| GTGGATGGCAGCTATGTTTA+TGG | - | chr6_4:16760650-16760669 | Msa0979510:CDS | 45.0% | |
| ! | ACTTCTAGGTGGAGTGTTAG+AGG | - | chr6_4:16760755-16760774 | Msa0979510:CDS | 45.0% |
| ! | TGTTAGAGGTGTATGGAGTG+AGG | - | chr6_4:16760769-16760788 | Msa0979510:CDS | 45.0% |
| !!! | ATTTAATATAATTTTTTAAG+TGG | - | chr6_4:16760855-16760874 | Msa0979510:CDS | 5.0% |
| !!! | ATTTAATATAATTTTTTAAG+TGG | - | chr6_4:16760855-16760874 | Msa0979510:CDS | 5.0% |
| !! | CAGTGGCATTGGCAAAGAGA+CGG | - | chr6_4:16759296-16759315 | Msa0979510:three_prime_UTR | 50.0% |
| AATCGAGTGGCTGCATCCAT+TGG | - | chr6_4:16759384-16759403 | Msa0979510:three_prime_UTR | 50.0% | |
| ! | GGCAGATGCTGTGTTGTTCT+TGG | - | chr6_4:16760586-16760605 | Msa0979510:intron | 50.0% |
| TGCCATCCACACGAAGATCA+AGG | + | chr6_4:16760640-16760659 | None:intergenic | 50.0% | |
| ! | ACACTCCACCTAGAAGTGTG+AGG | + | chr6_4:16760752-16760771 | None:intergenic | 50.0% |
| ! | GGTGGAGTGTTAGAGGTGTA+TGG | - | chr6_4:16760762-16760781 | Msa0979510:CDS | 50.0% |
| !! | CAGTGGCATTGGCAAAGAGA+CGG | - | chr6_4:16759296-16759315 | Msa0979510:three_prime_UTR | 50.0% |
| AATCGAGTGGCTGCATCCAT+TGG | - | chr6_4:16759384-16759403 | Msa0979510:three_prime_UTR | 50.0% | |
| ! | GGCAGATGCTGTGTTGTTCT+TGG | - | chr6_4:16760586-16760605 | Msa0979510:intron | 50.0% |
| TGCCATCCACACGAAGATCA+AGG | + | chr6_4:16760640-16760659 | None:intergenic | 50.0% | |
| ! | ACACTCCACCTAGAAGTGTG+AGG | + | chr6_4:16760752-16760771 | None:intergenic | 50.0% |
| ! | GGTGGAGTGTTAGAGGTGTA+TGG | - | chr6_4:16760762-16760781 | Msa0979510:CDS | 50.0% |
| ! | GGTGACGATGGCTACTTTGC+CGG | + | chr6_4:16759268-16759287 | None:intergenic | 55.0% |
| GGCAAAGTAGCCATCGTCAC+CGG | - | chr6_4:16759267-16759286 | Msa0979510:three_prime_UTR | 55.0% | |
| AAAGTAGCCATCGTCACCGG+AGG | - | chr6_4:16759270-16759289 | Msa0979510:three_prime_UTR | 55.0% | |
| CGTCTCTTTGCCAATGCCAC+TGG | + | chr6_4:16759298-16759317 | None:intergenic | 55.0% | |
| GCGCATCTCTTTGCCGATCA+AGG | - | chr6_4:16759318-16759337 | Msa0979510:three_prime_UTR | 55.0% | |
| CACCATGCGTGCACCTTGAT+CGG | + | chr6_4:16759334-16759353 | None:intergenic | 55.0% | |
| ! | AGACGAGTTGGGCAATCGAG+TGG | - | chr6_4:16759371-16759390 | Msa0979510:three_prime_UTR | 55.0% |
| GAAATACGCAGCGCGTGCAA+TGG | - | chr6_4:16760277-16760296 | Msa0979510:intron | 55.0% | |
| TCAAGACACCTTCGCTACCC+AGG | + | chr6_4:16760346-16760365 | None:intergenic | 55.0% | |
| !! | TGGGTAGCGAAGGTGTCTTG+AGG | - | chr6_4:16760345-16760364 | Msa0979510:intron | 55.0% |
| !! | CACTGGCCTTGATCTTCGTG+TGG | - | chr6_4:16760631-16760650 | Msa0979510:CDS | 55.0% |
| GGCCTTGATCTTCGTGTGGA+TGG | - | chr6_4:16760635-16760654 | Msa0979510:CDS | 55.0% | |
| ! | GGTGACGATGGCTACTTTGC+CGG | + | chr6_4:16759268-16759287 | None:intergenic | 55.0% |
| GGCAAAGTAGCCATCGTCAC+CGG | - | chr6_4:16759267-16759286 | Msa0979510:three_prime_UTR | 55.0% | |
| AAAGTAGCCATCGTCACCGG+AGG | - | chr6_4:16759270-16759289 | Msa0979510:three_prime_UTR | 55.0% | |
| CGTCTCTTTGCCAATGCCAC+TGG | + | chr6_4:16759298-16759317 | None:intergenic | 55.0% | |
| GCGCATCTCTTTGCCGATCA+AGG | - | chr6_4:16759318-16759337 | Msa0979510:three_prime_UTR | 55.0% | |
| CACCATGCGTGCACCTTGAT+CGG | + | chr6_4:16759334-16759353 | None:intergenic | 55.0% | |
| ! | AGACGAGTTGGGCAATCGAG+TGG | - | chr6_4:16759371-16759390 | Msa0979510:three_prime_UTR | 55.0% |
| GAAATACGCAGCGCGTGCAA+TGG | - | chr6_4:16760277-16760296 | Msa0979510:intron | 55.0% | |
| TCAAGACACCTTCGCTACCC+AGG | + | chr6_4:16760346-16760365 | None:intergenic | 55.0% | |
| !! | TGGGTAGCGAAGGTGTCTTG+AGG | - | chr6_4:16760345-16760364 | Msa0979510:intron | 55.0% |
| !! | CACTGGCCTTGATCTTCGTG+TGG | - | chr6_4:16760631-16760650 | Msa0979510:CDS | 55.0% |
| GGCCTTGATCTTCGTGTGGA+TGG | - | chr6_4:16760635-16760654 | Msa0979510:CDS | 55.0% | |
| TGCCGATCAAGGTGCACGCA+TGG | - | chr6_4:16759329-16759348 | Msa0979510:three_prime_UTR | 60.0% | |
| CGATCAAGGTGCACGCATGG+TGG | - | chr6_4:16759332-16759351 | Msa0979510:three_prime_UTR | 60.0% | |
| CGAGTGGCTGCATCCATTGG+CGG | - | chr6_4:16759387-16759406 | Msa0979510:three_prime_UTR | 60.0% | |
| CTGCATCCATTGGCGGCAAC+AGG | - | chr6_4:16759394-16759413 | Msa0979510:three_prime_UTR | 60.0% | |
| ATACGCAGCGCGTGCAATGG+TGG | - | chr6_4:16760280-16760299 | Msa0979510:intron | 60.0% | |
| ! | AATGGTGGAGGGGCACGTGA+GGG | - | chr6_4:16760295-16760314 | Msa0979510:intron | 60.0% |
| TGCCGATCAAGGTGCACGCA+TGG | - | chr6_4:16759329-16759348 | Msa0979510:three_prime_UTR | 60.0% | |
| CGATCAAGGTGCACGCATGG+TGG | - | chr6_4:16759332-16759351 | Msa0979510:three_prime_UTR | 60.0% | |
| CGAGTGGCTGCATCCATTGG+CGG | - | chr6_4:16759387-16759406 | Msa0979510:three_prime_UTR | 60.0% | |
| CTGCATCCATTGGCGGCAAC+AGG | - | chr6_4:16759394-16759413 | Msa0979510:three_prime_UTR | 60.0% | |
| ATACGCAGCGCGTGCAATGG+TGG | - | chr6_4:16760280-16760299 | Msa0979510:intron | 60.0% | |
| ! | AATGGTGGAGGGGCACGTGA+GGG | - | chr6_4:16760295-16760314 | Msa0979510:intron | 60.0% |
| ACTGGCACCTCCGGTGACGA+TGG | + | chr6_4:16759280-16759299 | None:intergenic | 65.0% | |
| !! | ATCGTCACCGGAGGTGCCAG+TGG | - | chr6_4:16759279-16759298 | Msa0979510:three_prime_UTR | 65.0% |
| !! | ACCGGAGGTGCCAGTGGCAT+TGG | - | chr6_4:16759285-16759304 | Msa0979510:three_prime_UTR | 65.0% |
| GCCAATGCCACTGGCACCTC+CGG | + | chr6_4:16759289-16759308 | None:intergenic | 65.0% | |
| GGTGCTCCTGTTGCCGCCAA+TGG | + | chr6_4:16759403-16759422 | None:intergenic | 65.0% | |
| ! | GCAGCGCGTGCAATGGTGGA+GGG | - | chr6_4:16760284-16760303 | Msa0979510:intron | 65.0% |
| ! | CAGCGCGTGCAATGGTGGAG+GGG | - | chr6_4:16760285-16760304 | Msa0979510:intron | 65.0% |
| ! | CAATGGTGGAGGGGCACGTG+AGG | - | chr6_4:16760294-16760313 | Msa0979510:intron | 65.0% |
| ! | ATGGTGGAGGGGCACGTGAG+GGG | - | chr6_4:16760296-16760315 | Msa0979510:intron | 65.0% |
| TGTGTGCACAGCGAGCGTCC+TGG | - | chr6_4:16760325-16760344 | Msa0979510:intron | 65.0% | |
| GTGTGCACAGCGAGCGTCCT+GGG | - | chr6_4:16760326-16760345 | Msa0979510:intron | 65.0% | |
| ACTGGCACCTCCGGTGACGA+TGG | + | chr6_4:16759280-16759299 | None:intergenic | 65.0% | |
| !! | ATCGTCACCGGAGGTGCCAG+TGG | - | chr6_4:16759279-16759298 | Msa0979510:three_prime_UTR | 65.0% |
| !! | ACCGGAGGTGCCAGTGGCAT+TGG | - | chr6_4:16759285-16759304 | Msa0979510:three_prime_UTR | 65.0% |
| GCCAATGCCACTGGCACCTC+CGG | + | chr6_4:16759289-16759308 | None:intergenic | 65.0% | |
| GGTGCTCCTGTTGCCGCCAA+TGG | + | chr6_4:16759403-16759422 | None:intergenic | 65.0% | |
| ! | GCAGCGCGTGCAATGGTGGA+GGG | - | chr6_4:16760284-16760303 | Msa0979510:intron | 65.0% |
| ! | CAGCGCGTGCAATGGTGGAG+GGG | - | chr6_4:16760285-16760304 | Msa0979510:intron | 65.0% |
| ! | CAATGGTGGAGGGGCACGTG+AGG | - | chr6_4:16760294-16760313 | Msa0979510:intron | 65.0% |
| ! | ATGGTGGAGGGGCACGTGAG+GGG | - | chr6_4:16760296-16760315 | Msa0979510:intron | 65.0% |
| TGTGTGCACAGCGAGCGTCC+TGG | - | chr6_4:16760325-16760344 | Msa0979510:intron | 65.0% | |
| GTGTGCACAGCGAGCGTCCT+GGG | - | chr6_4:16760326-16760345 | Msa0979510:intron | 65.0% | |
| CGCAGCGCGTGCAATGGTGG+AGG | - | chr6_4:16760283-16760302 | Msa0979510:intron | 70.0% | |
| GCGAGCGTCCTGGGTAGCGA+AGG | - | chr6_4:16760335-16760354 | Msa0979510:intron | 70.0% | |
| CGCAGCGCGTGCAATGGTGG+AGG | - | chr6_4:16760283-16760302 | Msa0979510:intron | 70.0% | |
| GCGAGCGTCCTGGGTAGCGA+AGG | - | chr6_4:16760335-16760354 | Msa0979510:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 16759190 | 16760936 | 16759190 | ID=Msa0979510;Name=Msa0979510 |
| chr6_4 | mRNA | 16759190 | 16760936 | 16759190 | ID=Msa0979510-mRNA-1;Parent=Msa0979510;Name=Msa0979510-mRNA-1;_AED=0.26;_eAED=0.26;_QI=35|1|1|1|1|1|2|245|269 |
| chr6_4 | exon | 16759190 | 16759971 | 16759190 | ID=Msa0979510-mRNA-1:exon:5292;Parent=Msa0979510-mRNA-1 |
| chr6_4 | exon | 16760629 | 16760936 | 16760629 | ID=Msa0979510-mRNA-1:exon:5291;Parent=Msa0979510-mRNA-1 |
| chr6_4 | five_prime_UTR | 16760902 | 16760936 | 16760902 | ID=Msa0979510-mRNA-1:five_prime_utr;Parent=Msa0979510-mRNA-1 |
| chr6_4 | CDS | 16760629 | 16760901 | 16760629 | ID=Msa0979510-mRNA-1:cds;Parent=Msa0979510-mRNA-1 |
| chr6_4 | CDS | 16759435 | 16759971 | 16759435 | ID=Msa0979510-mRNA-1:cds;Parent=Msa0979510-mRNA-1 |
| chr6_4 | three_prime_UTR | 16759190 | 16759434 | 16759190 | ID=Msa0979510-mRNA-1:three_prime_utr;Parent=Msa0979510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
