Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0322860 | XP_013463539.1 | 94.286 | 210 | 12 | 0 | 1 | 210 | 1 | 210 | 2.77e-140 | 400 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0322860 | sp|Q9ZRA4|AB19A_PRUPE | 71.635 | 208 | 58 | 1 | 3 | 209 | 1 | 208 | 2.03e-103 | 300 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa0322860 | 0.819522 | 1.111417e-52 | -8.615850e-47 |
| Msa0003040 | Msa0322860 | 0.831020 | 2.114982e-55 | -8.615850e-47 |
| Msa0006980 | Msa0322860 | 0.820781 | 5.719845e-53 | -8.615850e-47 |
| Msa0012440 | Msa0322860 | 0.810214 | 1.288198e-50 | -8.615850e-47 |
| Msa0016120 | Msa0322860 | 0.808921 | 2.442073e-50 | -8.615850e-47 |
| Msa0019600 | Msa0322860 | 0.815369 | 9.575294e-52 | -8.615850e-47 |
| Msa0036430 | Msa0322860 | 0.830363 | 3.062647e-55 | -8.615850e-47 |
| Msa0050040 | Msa0322860 | 0.826049 | 3.356656e-54 | -8.615850e-47 |
| Msa0055450 | Msa0322860 | 0.803734 | 3.026745e-49 | -8.615850e-47 |
| Msa0057240 | Msa0322860 | 0.801313 | 9.549542e-49 | -8.615850e-47 |
| Msa0084500 | Msa0322860 | 0.836185 | 1.085381e-56 | -8.615850e-47 |
| Msa0102990 | Msa0322860 | 0.826863 | 2.148416e-54 | -8.615850e-47 |
| Msa0106790 | Msa0322860 | 0.843566 | 1.295051e-58 | -8.615850e-47 |
| Msa0109880 | Msa0322860 | 0.804417 | 2.182308e-49 | -8.615850e-47 |
| Msa0118400 | Msa0322860 | 0.810961 | 8.885380e-51 | -8.615850e-47 |
| Msa0124130 | Msa0322860 | 0.807343 | 5.294542e-50 | -8.615850e-47 |
| Msa0130570 | Msa0322860 | 0.847172 | 1.368185e-59 | -8.615850e-47 |
| Msa0141600 | Msa0322860 | 0.818461 | 1.936644e-52 | -8.615850e-47 |
| Msa0146920 | Msa0322860 | 0.818000 | 2.463044e-52 | -8.615850e-47 |
| Msa0147560 | Msa0322860 | 0.809570 | 1.772739e-50 | -8.615850e-47 |
| Msa0149140 | Msa0322860 | 0.856224 | 3.718146e-62 | -8.615850e-47 |
| Msa0149560 | Msa0322860 | 0.805110 | 1.563323e-49 | -8.615850e-47 |
| Msa0152480 | Msa0322860 | 0.830042 | 3.668993e-55 | -8.615850e-47 |
| Msa0152500 | Msa0322860 | 0.804929 | 1.706277e-49 | -8.615850e-47 |
| Msa0153420 | Msa0322860 | 0.834505 | 2.883979e-56 | -8.615850e-47 |
| Msa0161680 | Msa0322860 | 0.803997 | 2.668031e-49 | -8.615850e-47 |
| Msa0176470 | Msa0322860 | 0.849602 | 2.909834e-60 | -8.615850e-47 |
| Msa0194380 | Msa0322860 | 0.846457 | 2.146585e-59 | -8.615850e-47 |
| Msa0197930 | Msa0322860 | 0.802601 | 5.193211e-49 | -8.615850e-47 |
| Msa0200030 | Msa0322860 | 0.801450 | 8.953025e-49 | -8.615850e-47 |
| Msa0203010 | Msa0322860 | 0.815285 | 9.998029e-52 | -8.615850e-47 |
| Msa0203030 | Msa0322860 | 0.887235 | 1.704670e-72 | -8.615850e-47 |
| Msa0206800 | Msa0322860 | 0.814020 | 1.905605e-51 | -8.615850e-47 |
| Msa0219190 | Msa0322860 | 0.850651 | 1.479273e-60 | -8.615850e-47 |
| Msa0220420 | Msa0322860 | 0.806220 | 9.144854e-50 | -8.615850e-47 |
| Msa0236110 | Msa0322860 | 0.858624 | 7.251127e-63 | -8.615850e-47 |
| Msa0252770 | Msa0322860 | 0.806689 | 7.282067e-50 | -8.615850e-47 |
| Msa0262560 | Msa0322860 | 0.803609 | 3.212172e-49 | -8.615850e-47 |
| Msa0273990 | Msa0322860 | 0.829306 | 5.542367e-55 | -8.615850e-47 |
| Msa0277290 | Msa0322860 | 0.810069 | 1.384255e-50 | -8.615850e-47 |
| Msa0280750 | Msa0322860 | 0.813791 | 2.140209e-51 | -8.615850e-47 |
| Msa0288200 | Msa0322860 | 0.817753 | 2.799715e-52 | -8.615850e-47 |
| Msa0298240 | Msa0322860 | 0.831284 | 1.821265e-55 | -8.615850e-47 |
| Msa0306120 | Msa0322860 | 0.810819 | 9.536075e-51 | -8.615850e-47 |
| Msa0314630 | Msa0322860 | 0.855267 | 7.076076e-62 | -8.615850e-47 |
| Msa0322830 | Msa0322860 | 0.946123 | 8.395310e-105 | -8.615850e-47 |
| Msa0322840 | Msa0322860 | 0.905523 | 3.922514e-80 | -8.615850e-47 |
| Msa0322860 | Msa0326540 | 0.806217 | 9.159144e-50 | -8.615850e-47 |
| Msa0322860 | Msa0329620 | 0.821171 | 4.652756e-53 | -8.615850e-47 |
| Msa0322860 | Msa0331530 | 0.806303 | 8.783518e-50 | -8.615850e-47 |
| Msa0322860 | Msa0344570 | 0.805448 | 1.328266e-49 | -8.615850e-47 |
| Msa0322860 | Msa0351770 | 0.839303 | 1.717286e-57 | -8.615850e-47 |
| Msa0322860 | Msa0359250 | 0.864301 | 1.342034e-64 | -8.615850e-47 |
| Msa0322860 | Msa0373960 | 0.829792 | 4.222703e-55 | -8.615850e-47 |
| Msa0322860 | Msa0382010 | 0.807248 | 5.544841e-50 | -8.615850e-47 |
| Msa0322860 | Msa0392420 | 0.804847 | 1.775054e-49 | -8.615850e-47 |
| Msa0322860 | Msa0406000 | 0.849357 | 3.405405e-60 | -8.615850e-47 |
| Msa0322860 | Msa0413930 | 0.825327 | 4.978780e-54 | -8.615850e-47 |
| Msa0322860 | Msa0417440 | 0.807785 | 4.265837e-50 | -8.615850e-47 |
| Msa0322860 | Msa0423100 | 0.863307 | 2.732602e-64 | -8.615850e-47 |
| Msa0322860 | Msa0424330 | 0.808592 | 2.871023e-50 | -8.615850e-47 |
| Msa0322860 | Msa0424340 | 0.823516 | 1.328090e-53 | -8.615850e-47 |
| Msa0322860 | Msa0436500 | 0.824348 | 8.475349e-54 | -8.615850e-47 |
| Msa0322860 | Msa0441590 | 0.840126 | 1.049123e-57 | -8.615850e-47 |
| Msa0322860 | Msa0444010 | 0.823871 | 1.096538e-53 | -8.615850e-47 |
| Msa0322860 | Msa0451400 | 0.850026 | 2.215727e-60 | -8.615850e-47 |
| Msa0322860 | Msa0464540 | 0.811413 | 7.090538e-51 | -8.615850e-47 |
| Msa0322860 | Msa0469260 | 0.822985 | 1.766615e-53 | -8.615850e-47 |
| Msa0322860 | Msa0476590 | 0.814459 | 1.524068e-51 | -8.615850e-47 |
| Msa0322860 | Msa0487570 | 0.810681 | 1.021360e-50 | -8.615850e-47 |
| Msa0322860 | Msa0487630 | 0.805274 | 1.445065e-49 | -8.615850e-47 |
| Msa0322860 | Msa0492190 | 0.841122 | 5.752887e-58 | -8.615850e-47 |
| Msa0322860 | Msa0509790 | 0.801471 | 8.865158e-49 | -8.615850e-47 |
| Msa0322860 | Msa0515950 | 0.811614 | 6.410048e-51 | -8.615850e-47 |
| Msa0322860 | Msa0520510 | 0.837101 | 6.338965e-57 | -8.615850e-47 |
| Msa0322860 | Msa0534930 | 0.824284 | 8.771885e-54 | -8.615850e-47 |
| Msa0322860 | Msa0535040 | 0.842453 | 2.562364e-58 | -8.615850e-47 |
| Msa0322860 | Msa0575740 | 0.840618 | 7.801616e-58 | -8.615850e-47 |
| Msa0322860 | Msa0591790 | 0.836966 | 6.861964e-57 | -8.615850e-47 |
| Msa0322860 | Msa0591800 | 0.836270 | 1.032802e-56 | -8.615850e-47 |
| Msa0322860 | Msa0663680 | 0.801273 | 9.734342e-49 | -8.615850e-47 |
| Msa0322860 | Msa0669840 | 0.862530 | 4.749646e-64 | -8.615850e-47 |
| Msa0322860 | Msa0682530 | 0.831615 | 1.509485e-55 | -8.615850e-47 |
| Msa0322860 | Msa0691070 | 0.800075 | 1.708239e-48 | -8.615850e-47 |
| Msa0322860 | Msa0691160 | 0.812027 | 5.213258e-51 | -8.615850e-47 |
| Msa0322860 | Msa0707220 | 0.837835 | 4.111660e-57 | -8.615850e-47 |
| Msa0322860 | Msa0725860 | 0.804856 | 1.767341e-49 | -8.615850e-47 |
| Msa0322860 | Msa0739580 | 0.817982 | 2.485933e-52 | -8.615850e-47 |
| Msa0322860 | Msa0742180 | 0.840845 | 6.804685e-58 | -8.615850e-47 |
| Msa0322860 | Msa0764820 | 0.802687 | 4.983587e-49 | -8.615850e-47 |
| Msa0322860 | Msa0786040 | 0.804950 | 1.688900e-49 | -8.615850e-47 |
| Msa0322860 | Msa0823400 | 0.835934 | 1.256764e-56 | -8.615850e-47 |
| Msa0322860 | Msa0843640 | 0.820528 | 6.541052e-53 | -8.615850e-47 |
| Msa0322860 | Msa0858840 | 0.815280 | 1.002597e-51 | -8.615850e-47 |
| Msa0322860 | Msa0860280 | 0.810196 | 1.299643e-50 | -8.615850e-47 |
| Msa0322860 | Msa0862310 | 0.827331 | 1.659815e-54 | -8.615850e-47 |
| Msa0322860 | Msa0867350 | 0.837605 | 4.711241e-57 | -8.615850e-47 |
| Msa0322860 | Msa0885060 | 0.836552 | 8.753939e-57 | -8.615850e-47 |
| Msa0322860 | Msa0898730 | 0.843871 | 1.073233e-58 | -8.615850e-47 |
| Msa0322860 | Msa0899950 | 0.833628 | 4.780335e-56 | -8.615850e-47 |
| Msa0322860 | Msa0922750 | 0.804101 | 2.538815e-49 | -8.615850e-47 |
| Msa0322860 | Msa0927120 | 0.800941 | 1.138131e-48 | -8.615850e-47 |
| Msa0322860 | Msa0929870 | 0.827099 | 1.886446e-54 | -8.615850e-47 |
| Msa0322860 | Msa0936410 | 0.814423 | 1.552805e-51 | -8.615850e-47 |
| Msa0322860 | Msa0941960 | 0.812137 | 4.932233e-51 | -8.615850e-47 |
| Msa0322860 | Msa0946210 | 0.824136 | 9.504257e-54 | -8.615850e-47 |
| Msa0322860 | Msa0961560 | 0.820978 | 5.154177e-53 | -8.615850e-47 |
| Msa0322860 | Msa0965310 | 0.828467 | 8.847976e-55 | -8.615850e-47 |
| Msa0322860 | Msa0979030 | 0.805288 | 1.434819e-49 | -8.615850e-47 |
| Msa0322860 | Msa0979510 | 0.850825 | 1.321724e-60 | -8.615850e-47 |
| Msa0322860 | Msa0996270 | 0.808426 | 3.116126e-50 | -8.615850e-47 |
| Msa0322860 | Msa0999300 | 0.837669 | 4.535081e-57 | -8.615850e-47 |
| Msa0322860 | Msa0999340 | 0.866241 | 3.293054e-65 | -8.615850e-47 |
| Msa0322860 | Msa0999350 | 0.854058 | 1.585010e-61 | -8.615850e-47 |
| Msa0322860 | Msa0999360 | 0.854088 | 1.553681e-61 | -8.615850e-47 |
| Msa0322860 | Msa0999390 | 0.848021 | 7.990910e-60 | -8.615850e-47 |
| Msa0322860 | Msa0999400 | 0.848973 | 4.354927e-60 | -8.615850e-47 |
| Msa0322860 | Msa0999410 | 0.839026 | 2.026109e-57 | -8.615850e-47 |
| Msa0322860 | Msa0999700 | 0.810914 | 9.096146e-51 | -8.615850e-47 |
| Msa0322860 | Msa1001890 | 0.814585 | 1.429197e-51 | -8.615850e-47 |
| Msa0322860 | Msa1033560 | 0.811154 | 8.067268e-51 | -8.615850e-47 |
| Msa0322860 | Msa1034680 | 0.818847 | 1.582700e-52 | -8.615850e-47 |
| Msa0322860 | Msa1037890 | 0.801329 | 9.478538e-49 | -8.615850e-47 |
| Msa0322860 | Msa1037900 | 0.812397 | 4.328559e-51 | -8.615850e-47 |
| Msa0322860 | Msa1041530 | 0.821864 | 3.218760e-53 | -8.615850e-47 |
| Msa0322860 | Msa1047990 | 0.801827 | 7.494168e-49 | -8.615850e-47 |
| Msa0322860 | Msa1073340 | 0.839506 | 1.521469e-57 | -8.615850e-47 |
| Msa0322860 | Msa1081570 | 0.825910 | 3.622790e-54 | -8.615850e-47 |
| Msa0322860 | Msa1092020 | 0.817914 | 2.574727e-52 | -8.615850e-47 |
| Msa0322860 | Msa1113850 | 0.834095 | 3.652773e-56 | -8.615850e-47 |
| Msa0322860 | Msa1127140 | 0.819990 | 8.686757e-53 | -8.615850e-47 |
| Msa0322860 | Msa1129980 | 0.805403 | 1.357372e-49 | -8.615850e-47 |
| Msa0322860 | Msa1135380 | 0.812502 | 4.104194e-51 | -8.615850e-47 |
| Msa0322860 | Msa1145020 | 0.860237 | 2.376498e-63 | -8.615850e-47 |
| Msa0322860 | Msa1166400 | 0.813527 | 2.447157e-51 | -8.615850e-47 |
| Msa0322860 | Msa1179280 | 0.802611 | 5.167103e-49 | -8.615850e-47 |
| Msa0322860 | Msa1201110 | 0.824181 | 9.276197e-54 | -8.615850e-47 |
| Msa0322860 | Msa1201160 | 0.842384 | 2.673111e-58 | -8.615850e-47 |
| Msa0322860 | Msa1227340 | 0.825924 | 3.595595e-54 | -8.615850e-47 |
| Msa0322860 | Msa1228190 | 0.859786 | 3.249615e-63 | -8.615850e-47 |
| Msa0322860 | Msa1228610 | 0.819437 | 1.162140e-52 | -8.615850e-47 |
| Msa0322860 | Msa1233560 | 0.805106 | 1.566559e-49 | -8.615850e-47 |
| Msa0322860 | Msa1271260 | 0.874693 | 5.531531e-68 | -8.615850e-47 |
| Msa0322860 | Msa1292040 | 0.811379 | 7.211951e-51 | -8.615850e-47 |
| Msa0322860 | Msa1294290 | 0.842871 | 1.984414e-58 | -8.615850e-47 |
| Msa0322860 | Msa1305510 | 0.825472 | 4.601128e-54 | -8.615850e-47 |
| Msa0322860 | Msa1345420 | 0.839887 | 1.210746e-57 | -8.615850e-47 |
| Msa0322860 | Msa1379970 | 0.829282 | 5.616816e-55 | -8.615850e-47 |
| Msa0322860 | Msa1389050 | 0.823335 | 1.464021e-53 | -8.615850e-47 |
| Msa0322860 | Msa1394890 | 0.801514 | 8.686946e-49 | -8.615850e-47 |
| Msa0322860 | Msa1406780 | 0.812850 | 3.444761e-51 | -8.615850e-47 |
| Msa0322860 | Msa1420060 | 0.870808 | 1.103123e-66 | -8.615850e-47 |
| Msa0322860 | Msa1421550 | 0.852251 | 5.218481e-61 | -8.615850e-47 |
| Msa0322860 | Msa1424690 | 0.835365 | 1.751295e-56 | -8.615850e-47 |
| Msa0322860 | Msa1429420 | 0.811217 | 7.816947e-51 | -8.615850e-47 |
| Msa0322860 | Msa1431850 | 0.821436 | 4.041848e-53 | -8.615850e-47 |
| Msa0322860 | Msa1435480 | 0.858186 | 9.790734e-63 | -8.615850e-47 |
| Msa0322860 | Msa1442630 | 0.832750 | 7.908006e-56 | -8.615850e-47 |
| Msa0322860 | Msa1446520 | 0.820053 | 8.404245e-53 | -8.615850e-47 |
| Msa0322860 | Msa1456730 | 0.821527 | 3.850122e-53 | -8.615850e-47 |
| Msa0322860 | Msa1458910 | 0.841188 | 5.527755e-58 | -8.615850e-47 |
| Msa0322860 | Msa1462530 | 0.819638 | 1.045574e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0322860 | MtrunA17_Chr2g0300581 | 94.286 | 210 | 12 | 0 | 1 | 210 | 1 | 210 | 2.55e-144 | 400 |
| Msa0322860 | MtrunA17_Chr2g0300591 | 92.857 | 210 | 15 | 0 | 1 | 210 | 1 | 210 | 1.08e-142 | 396 |
| Msa0322860 | MtrunA17_Chr2g0300561 | 83.810 | 210 | 34 | 0 | 1 | 210 | 1 | 210 | 1.01e-126 | 356 |
| Msa0322860 | MtrunA17_Chr8g0343911 | 63.942 | 208 | 75 | 0 | 3 | 210 | 1 | 208 | 1.62e-92 | 269 |
| Msa0322860 | MtrunA17_Chr8g0343934 | 55.502 | 209 | 89 | 3 | 4 | 210 | 3 | 209 | 1.05e-79 | 237 |
| Msa0322860 | MtrunA17_Chr8g0343954 | 56.995 | 193 | 81 | 2 | 18 | 210 | 19 | 209 | 7.60e-78 | 232 |
| Msa0322860 | MtrunA17_Chr8g0343961 | 54.545 | 209 | 91 | 3 | 4 | 210 | 3 | 209 | 6.19e-77 | 230 |
| Msa0322860 | MtrunA17_Chr8g0343921 | 51.442 | 208 | 95 | 2 | 7 | 210 | 2 | 207 | 3.51e-72 | 218 |
| Msa0322860 | MtrunA17_Chr2g0301611 | 50.000 | 212 | 101 | 4 | 1 | 210 | 1 | 209 | 4.92e-71 | 215 |
| Msa0322860 | MtrunA17_Chr2g0302171 | 50.718 | 209 | 99 | 3 | 4 | 210 | 3 | 209 | 1.48e-69 | 211 |
| Msa0322860 | MtrunA17_Chr2g0313961 | 50.485 | 206 | 99 | 3 | 4 | 209 | 6 | 208 | 4.86e-68 | 207 |
| Msa0322860 | MtrunA17_Chr3g0084531 | 49.282 | 209 | 102 | 3 | 4 | 210 | 3 | 209 | 6.31e-67 | 204 |
| Msa0322860 | MtrunA17_Chr2g0297241 | 50.000 | 208 | 100 | 3 | 4 | 209 | 3 | 208 | 1.19e-66 | 204 |
| Msa0322860 | MtrunA17_Chr2g0297231 | 49.029 | 206 | 101 | 3 | 4 | 207 | 3 | 206 | 2.45e-66 | 202 |
| Msa0322860 | MtrunA17_Chr3g0084511 | 48.558 | 208 | 104 | 3 | 4 | 210 | 3 | 208 | 1.35e-65 | 201 |
| Msa0322860 | MtrunA17_Chr3g0084521 | 48.558 | 208 | 104 | 3 | 4 | 210 | 3 | 208 | 5.12e-65 | 199 |
| Msa0322860 | MtrunA17_Chr8g0344051 | 45.540 | 213 | 112 | 3 | 1 | 210 | 1 | 212 | 5.37e-61 | 189 |
| Msa0322860 | MtrunA17_Chr4g0003361 | 48.077 | 208 | 105 | 3 | 3 | 210 | 1 | 205 | 9.87e-61 | 188 |
| Msa0322860 | MtrunA17_Chr5g0411961 | 45.972 | 211 | 111 | 3 | 1 | 210 | 1 | 209 | 1.11e-60 | 188 |
| Msa0322860 | MtrunA17_Chr8g0344021 | 46.009 | 213 | 111 | 3 | 1 | 210 | 1 | 212 | 4.95e-60 | 187 |
| Msa0322860 | MtrunA17_Chr4g0012651 | 47.423 | 194 | 100 | 2 | 17 | 210 | 18 | 209 | 7.01e-59 | 184 |
| Msa0322860 | MtrunA17_Chr2g0302541 | 46.154 | 195 | 103 | 2 | 16 | 210 | 17 | 209 | 2.40e-58 | 182 |
| Msa0322860 | MtrunA17_Chr7g0217811 | 46.392 | 194 | 102 | 2 | 17 | 210 | 18 | 209 | 3.67e-58 | 182 |
| Msa0322860 | MtrunA17_Chr3g0115141 | 44.186 | 215 | 110 | 5 | 1 | 210 | 1 | 210 | 3.60e-57 | 179 |
| Msa0322860 | MtrunA17_Chr8g0344031 | 44.860 | 214 | 111 | 4 | 1 | 210 | 1 | 211 | 4.18e-57 | 179 |
| Msa0322860 | MtrunA17_Chr8g0344041 | 41.346 | 208 | 120 | 2 | 4 | 210 | 7 | 213 | 6.13e-55 | 174 |
| Msa0322860 | MtrunA17_Chr2g0286171 | 42.396 | 217 | 113 | 5 | 1 | 210 | 1 | 212 | 1.99e-53 | 170 |
| Msa0322860 | MtrunA17_Chr3g0084551 | 44.019 | 209 | 107 | 4 | 4 | 210 | 3 | 203 | 1.69e-51 | 166 |
| Msa0322860 | MtrunA17_Chr2g0292901 | 41.146 | 192 | 106 | 3 | 17 | 204 | 23 | 211 | 3.24e-42 | 141 |
| Msa0322860 | MtrunA17_Chr2g0292831 | 40.741 | 189 | 105 | 3 | 20 | 204 | 25 | 210 | 3.75e-42 | 141 |
| Msa0322860 | MtrunA17_Chr1g0189841 | 41.038 | 212 | 109 | 5 | 8 | 204 | 5 | 215 | 4.11e-41 | 139 |
| Msa0322860 | MtrunA17_Chr4g0007051 | 39.906 | 213 | 111 | 5 | 7 | 204 | 4 | 214 | 3.31e-40 | 137 |
| Msa0322860 | MtrunA17_Chr4g0007031 | 39.906 | 213 | 111 | 5 | 7 | 204 | 4 | 214 | 3.46e-40 | 136 |
| Msa0322860 | MtrunA17_Chr5g0419971 | 39.906 | 213 | 111 | 5 | 7 | 204 | 4 | 214 | 3.46e-40 | 136 |
| Msa0322860 | MtrunA17_Chr5g0419981 | 39.906 | 213 | 111 | 5 | 7 | 204 | 4 | 214 | 3.46e-40 | 136 |
| Msa0322860 | MtrunA17_Chr6g0449731 | 39.535 | 215 | 115 | 5 | 3 | 204 | 1 | 213 | 1.91e-39 | 134 |
| Msa0322860 | MtrunA17_Chr1g0193421 | 40.323 | 186 | 109 | 1 | 23 | 206 | 30 | 215 | 5.06e-39 | 133 |
| Msa0322860 | MtrunA17_Chr6g0449761 | 39.535 | 215 | 115 | 5 | 3 | 204 | 1 | 213 | 6.00e-39 | 134 |
| Msa0322860 | MtrunA17_Chr7g0271211 | 40.860 | 186 | 108 | 1 | 23 | 206 | 26 | 211 | 7.50e-39 | 133 |
| Msa0322860 | MtrunA17_Chr1g0210761 | 36.453 | 203 | 122 | 3 | 3 | 204 | 9 | 205 | 8.16e-39 | 132 |
| Msa0322860 | MtrunA17_Chr6g0449771 | 39.070 | 215 | 116 | 5 | 3 | 204 | 1 | 213 | 1.29e-38 | 132 |
| Msa0322860 | MtrunA17_Chr2g0285871 | 38.498 | 213 | 114 | 5 | 7 | 204 | 4 | 214 | 1.81e-38 | 132 |
| Msa0322860 | MtrunA17_Chr1g0178711 | 41.317 | 167 | 97 | 1 | 40 | 206 | 56 | 221 | 3.12e-38 | 132 |
| Msa0322860 | MtrunA17_Chr4g0007041 | 38.498 | 213 | 114 | 5 | 7 | 204 | 4 | 214 | 3.92e-38 | 131 |
| Msa0322860 | MtrunA17_Chr6g0449751 | 40.465 | 215 | 115 | 6 | 1 | 204 | 1 | 213 | 1.82e-37 | 129 |
| Msa0322860 | MtrunA17_Chr1g0156131 | 40.237 | 169 | 97 | 2 | 40 | 204 | 39 | 207 | 2.42e-37 | 129 |
| Msa0322860 | MtrunA17_Chr2g0292861 | 41.176 | 170 | 95 | 3 | 40 | 204 | 7 | 176 | 3.04e-37 | 127 |
| Msa0322860 | MtrunA17_Chr2g0292841 | 41.176 | 170 | 95 | 3 | 40 | 204 | 7 | 176 | 6.28e-37 | 127 |
| Msa0322860 | MtrunA17_Chr1g0193671 | 35.870 | 184 | 116 | 1 | 23 | 204 | 29 | 212 | 1.14e-34 | 122 |
| Msa0322860 | MtrunA17_Chr2g0292911 | 49.573 | 117 | 57 | 1 | 40 | 154 | 7 | 123 | 2.60e-34 | 119 |
| Msa0322860 | MtrunA17_Chr5g0414971 | 34.921 | 189 | 120 | 2 | 23 | 208 | 33 | 221 | 1.05e-32 | 117 |
| Msa0322860 | MtrunA17_Chr6g0449791 | 40.373 | 161 | 89 | 3 | 14 | 169 | 19 | 177 | 2.97e-31 | 113 |
| Msa0322860 | MtrunA17_Chr3g0130241 | 36.170 | 188 | 105 | 4 | 1 | 175 | 63 | 248 | 8.92e-31 | 114 |
| Msa0322860 | MtrunA17_Chr3g0084501 | 52.427 | 103 | 47 | 2 | 4 | 106 | 6 | 106 | 9.55e-31 | 108 |
| Msa0322860 | MtrunA17_Chr6g0449781 | 37.433 | 187 | 110 | 4 | 23 | 204 | 28 | 212 | 2.29e-30 | 111 |
| Msa0322860 | MtrunA17_Chr8g0335851 | 35.028 | 177 | 102 | 5 | 4 | 169 | 5 | 179 | 1.11e-28 | 107 |
| Msa0322860 | MtrunA17_Chr2g0321591 | 33.010 | 206 | 122 | 5 | 2 | 203 | 8 | 201 | 5.79e-25 | 97.1 |
| Msa0322860 | MtrunA17_Chr2g0321581 | 33.010 | 206 | 122 | 5 | 2 | 203 | 8 | 201 | 6.44e-25 | 97.1 |
| Msa0322860 | MtrunA17_Chr2g0321601 | 32.524 | 206 | 123 | 5 | 2 | 203 | 7 | 200 | 1.86e-24 | 95.9 |
| Msa0322860 | MtrunA17_Chr4g0026201 | 33.333 | 129 | 85 | 1 | 76 | 203 | 74 | 202 | 3.53e-18 | 79.3 |
| Msa0322860 | MtrunA17_Chr4g0026191 | 33.333 | 129 | 85 | 1 | 76 | 203 | 74 | 202 | 5.47e-18 | 78.6 |
| Msa0322860 | MtrunA17_Chr2g0327651 | 33.663 | 101 | 65 | 2 | 43 | 142 | 6 | 105 | 6.00e-14 | 65.9 |
| Msa0322860 | MtrunA17_Chr2g0292881 | 47.368 | 57 | 28 | 1 | 88 | 142 | 1 | 57 | 4.67e-11 | 56.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0322860 | AT5G20630.1 | 65.238 | 210 | 72 | 1 | 1 | 209 | 1 | 210 | 6.78e-95 | 276 |
| Msa0322860 | AT1G72610.1 | 62.981 | 208 | 77 | 0 | 3 | 210 | 1 | 208 | 6.88e-87 | 255 |
| Msa0322860 | AT5G39160.3 | 43.684 | 190 | 99 | 3 | 23 | 207 | 30 | 216 | 2.24e-44 | 147 |
| Msa0322860 | AT3G04200.1 | 45.026 | 191 | 99 | 3 | 23 | 207 | 33 | 223 | 1.11e-43 | 146 |
| Msa0322860 | AT5G39190.1 | 43.979 | 191 | 101 | 3 | 23 | 207 | 30 | 220 | 1.34e-43 | 145 |
| Msa0322860 | AT5G39160.1 | 43.979 | 191 | 101 | 3 | 23 | 207 | 30 | 220 | 1.51e-43 | 145 |
| Msa0322860 | AT5G39130.1 | 43.455 | 191 | 102 | 3 | 23 | 207 | 30 | 220 | 4.50e-43 | 144 |
| Msa0322860 | AT5G39110.1 | 42.365 | 203 | 106 | 5 | 13 | 204 | 16 | 218 | 5.61e-41 | 139 |
| Msa0322860 | AT5G39120.1 | 40.845 | 213 | 117 | 5 | 1 | 204 | 5 | 217 | 6.70e-41 | 139 |
| Msa0322860 | AT1G18980.1 | 40.686 | 204 | 116 | 3 | 3 | 204 | 16 | 216 | 7.58e-41 | 139 |
| Msa0322860 | AT1G18970.1 | 39.904 | 208 | 119 | 3 | 1 | 204 | 11 | 216 | 1.21e-40 | 138 |
| Msa0322860 | AT3G62020.1 | 36.893 | 206 | 120 | 3 | 9 | 204 | 8 | 213 | 2.48e-40 | 137 |
| Msa0322860 | AT5G38960.1 | 42.857 | 196 | 97 | 6 | 23 | 207 | 32 | 223 | 4.38e-40 | 137 |
| Msa0322860 | AT3G05950.1 | 43.386 | 189 | 99 | 4 | 23 | 204 | 32 | 219 | 1.78e-39 | 135 |
| Msa0322860 | AT5G39150.1 | 40.000 | 215 | 118 | 5 | 1 | 204 | 3 | 217 | 2.57e-39 | 135 |
| Msa0322860 | AT5G39180.1 | 40.000 | 215 | 118 | 5 | 1 | 204 | 3 | 217 | 4.21e-39 | 134 |
| Msa0322860 | AT1G02335.1 | 35.122 | 205 | 131 | 1 | 5 | 207 | 12 | 216 | 1.03e-38 | 133 |
| Msa0322860 | AT3G04150.1 | 41.026 | 195 | 107 | 4 | 23 | 210 | 32 | 225 | 1.35e-38 | 133 |
| Msa0322860 | AT3G04150.2 | 41.341 | 179 | 100 | 2 | 37 | 210 | 60 | 238 | 7.09e-38 | 132 |
| Msa0322860 | AT1G09560.1 | 42.935 | 184 | 103 | 2 | 23 | 204 | 30 | 213 | 2.27e-37 | 129 |
| Msa0322860 | AT5G26700.1 | 37.129 | 202 | 121 | 3 | 3 | 203 | 10 | 206 | 2.55e-37 | 129 |
| Msa0322860 | AT3G04190.1 | 43.902 | 164 | 86 | 3 | 23 | 181 | 32 | 194 | 2.56e-37 | 129 |
| Msa0322860 | AT5G61750.1 | 39.106 | 179 | 93 | 3 | 1 | 169 | 1 | 173 | 2.68e-37 | 129 |
| Msa0322860 | AT3G62020.2 | 38.012 | 171 | 103 | 2 | 37 | 204 | 14 | 184 | 4.99e-37 | 128 |
| Msa0322860 | AT5G39190.2 | 43.558 | 163 | 87 | 2 | 50 | 207 | 36 | 198 | 9.53e-37 | 127 |
| Msa0322860 | AT5G39160.2 | 43.558 | 163 | 87 | 2 | 50 | 207 | 36 | 198 | 9.95e-37 | 127 |
| Msa0322860 | AT5G38940.1 | 45.033 | 151 | 79 | 2 | 23 | 169 | 32 | 182 | 2.31e-36 | 127 |
| Msa0322860 | AT5G38940.2 | 45.033 | 151 | 79 | 2 | 23 | 169 | 56 | 206 | 3.87e-36 | 127 |
| Msa0322860 | AT3G04180.1 | 40.625 | 192 | 104 | 6 | 23 | 206 | 32 | 221 | 9.19e-36 | 125 |
| Msa0322860 | AT5G38930.1 | 45.033 | 151 | 79 | 2 | 23 | 169 | 32 | 182 | 1.70e-35 | 125 |
| Msa0322860 | AT4G14630.1 | 39.153 | 189 | 108 | 3 | 23 | 204 | 32 | 220 | 6.99e-35 | 123 |
| Msa0322860 | AT5G38910.1 | 40.887 | 203 | 106 | 6 | 14 | 204 | 17 | 217 | 9.75e-35 | 123 |
| Msa0322860 | AT3G05930.1 | 36.232 | 207 | 128 | 3 | 1 | 203 | 6 | 212 | 1.26e-34 | 122 |
| Msa0322860 | AT3G04170.1 | 41.361 | 191 | 101 | 6 | 23 | 206 | 32 | 218 | 1.96e-34 | 122 |
| Msa0322860 | AT3G10080.1 | 35.979 | 189 | 115 | 2 | 21 | 204 | 30 | 217 | 7.39e-34 | 120 |
| Msa0322860 | AT3G10080.2 | 35.979 | 189 | 115 | 2 | 21 | 204 | 101 | 288 | 2.98e-33 | 121 |
| Msa0322860 | AT1G74820.1 | 35.096 | 208 | 129 | 3 | 1 | 204 | 18 | 223 | 1.76e-32 | 117 |
| Msa0322860 | AT1G10460.1 | 37.079 | 178 | 104 | 4 | 37 | 208 | 42 | 217 | 6.82e-32 | 115 |
| Msa0322860 | AT5G38910.2 | 31.579 | 209 | 98 | 6 | 4 | 204 | 9 | 180 | 1.13e-15 | 72.4 |
Find 51 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAACGACCAACATTAATT+TGG | 0.178858 | 2_4:+26415577 | None:intergenic |
| GAAGTATTGGTTGTTATTAA+AGG | 0.278056 | 2_4:-26415699 | Msa0322860:CDS |
| AAGAAGCTTAAGAGTGTTCT+TGG | 0.300035 | 2_4:-26415426 | Msa0322860:CDS |
| TCATTCGCGGTTACCTTTGA+TGG | 0.323535 | 2_4:+26415897 | None:intergenic |
| GAATATCCAGCCGGGCCATT+TGG | 0.346876 | 2_4:+26415930 | None:intergenic |
| ATAATGTTTGAGGTGTTTCC+AGG | 0.356335 | 2_4:+26415849 | None:intergenic |
| TAATCCTCGTCTACAGATAT+TGG | 0.405016 | 2_4:-26415523 | Msa0322860:CDS |
| TCACAATTTCCCGGTGTAAA+CGG | 0.422953 | 2_4:-26415798 | Msa0322860:CDS |
| CCCCGGTGCTTCGGAAGTAT+TGG | 0.434736 | 2_4:-26415712 | Msa0322860:CDS |
| TTTCCCGGTGTAAACGGTCT+TGG | 0.446321 | 2_4:-26415792 | Msa0322860:CDS |
| AAGAGTGTTCTTGGAGGTAG+TGG | 0.449452 | 2_4:-26415417 | Msa0322860:CDS |
| AGCGGCTTTGATAATGTTTG+AGG | 0.461127 | 2_4:+26415839 | None:intergenic |
| AATGCACCAAATGGCCCGGC+TGG | 0.461203 | 2_4:-26415936 | Msa0322860:CDS |
| AACCAATACTTCCGAAGCAC+CGG | 0.468211 | 2_4:+26415710 | None:intergenic |
| TCACACACACCCCGGTGCTT+CGG | 0.471434 | 2_4:-26415721 | Msa0322860:CDS |
| AGGTGTTTCCAGGTGCGGCT+AGG | 0.473117 | 2_4:+26415859 | None:intergenic |
| TTCCAGGTGCGGCTAGGCCG+TGG | 0.474288 | 2_4:+26415865 | None:intergenic |
| TACCACGGCCTAGCCGCACC+TGG | 0.482390 | 2_4:-26415867 | Msa0322860:CDS |
| GGCTATATCTAAACGCGCCA+TGG | 0.483268 | 2_4:+26415764 | None:intergenic |
| GCATTAGACTCACAATTTCC+CGG | 0.483529 | 2_4:-26415807 | Msa0322860:CDS |
| ATTAAAGGAACAATCAGTGC+TGG | 0.495019 | 2_4:-26415684 | Msa0322860:CDS |
| TTGCATTTCCAAATTAATGT+TGG | 0.515849 | 2_4:-26415585 | Msa0322860:CDS |
| ACCAATACTTCCGAAGCACC+GGG | 0.531532 | 2_4:+26415711 | None:intergenic |
| GCAGATTACAATGCACCAAA+TGG | 0.532463 | 2_4:-26415945 | Msa0322860:CDS |
| TTCTTGCAAACCACCATCAA+AGG | 0.552457 | 2_4:-26415910 | Msa0322860:CDS |
| CGTTTAGATATAGCCGTTGG+TGG | 0.560060 | 2_4:-26415756 | Msa0322860:CDS |
| AAGCTTAAGAGTGTTCTTGG+AGG | 0.564526 | 2_4:-26415423 | Msa0322860:CDS |
| GTTTGAGGTGTTTCCAGGTG+CGG | 0.569017 | 2_4:+26415854 | None:intergenic |
| TTACAATGCACCAAATGGCC+CGG | 0.571769 | 2_4:-26415940 | Msa0322860:CDS |
| TTCGCGGTTACCTTTGATGG+TGG | 0.572308 | 2_4:+26415900 | None:intergenic |
| AACGTAAACAACATTGTCAG+AGG | 0.574065 | 2_4:+26415653 | None:intergenic |
| GTTGCAGTAATAAACTCCGT+TGG | 0.592047 | 2_4:+26415474 | None:intergenic |
| ATTCCAAGACCGTTTACACC+GGG | 0.600502 | 2_4:+26415789 | None:intergenic |
| TGGAAATGCAACAATCCTTG+TGG | 0.601071 | 2_4:+26415597 | None:intergenic |
| GGTTTGCAAGAATATCCAGC+CGG | 0.602375 | 2_4:+26415921 | None:intergenic |
| TACGTTAAAACACTTCACAA+AGG | 0.611341 | 2_4:-26415636 | Msa0322860:CDS |
| TGCTACGCAGAAATCTACTA+CGG | 0.612239 | 2_4:+26415965 | None:intergenic |
| GATTCCAAGACCGTTTACAC+CGG | 0.616073 | 2_4:+26415788 | None:intergenic |
| GCACCGGGGTGTGTGTGAAG+TGG | 0.618194 | 2_4:+26415726 | None:intergenic |
| GTTTGCAAGAATATCCAGCC+GGG | 0.622259 | 2_4:+26415922 | None:intergenic |
| GTGGTAGACGAAGTCATTCG+CGG | 0.625632 | 2_4:+26415884 | None:intergenic |
| AAACGGTCTTGGAATCTCCA+TGG | 0.625728 | 2_4:-26415781 | Msa0322860:CDS |
| AAGTGGAATAACACCACCAA+CGG | 0.630116 | 2_4:+26415743 | None:intergenic |
| GTCTAATGCGGTGGTAACAG+CGG | 0.634535 | 2_4:+26415821 | None:intergenic |
| ATTCCACTTCACACACACCC+CGG | 0.641125 | 2_4:-26415729 | Msa0322860:CDS |
| GCGCGTTTAGATATAGCCGT+TGG | 0.647288 | 2_4:-26415759 | Msa0322860:CDS |
| TAATCCAATATCTGTAGACG+AGG | 0.678147 | 2_4:+26415519 | None:intergenic |
| GGGAAATTGTGAGTCTAATG+CGG | 0.678656 | 2_4:+26415809 | None:intergenic |
| AAATTGTGAGTCTAATGCGG+TGG | 0.693385 | 2_4:+26415812 | None:intergenic |
| GCGAATGACTTCGTCTACCA+CGG | 0.705558 | 2_4:-26415882 | Msa0322860:CDS |
| CCAATACTTCCGAAGCACCG+GGG | 0.761220 | 2_4:+26415712 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAGTATTGGTTGTTATTAA+AGG | - | chr2_4:26415737-26415756 | Msa0322860:CDS | 25.0% |
| ! | TTGCATTTCCAAATTAATGT+TGG | - | chr2_4:26415851-26415870 | Msa0322860:CDS | 25.0% |
| TACGTTAAAACACTTCACAA+AGG | - | chr2_4:26415800-26415819 | Msa0322860:CDS | 30.0% | |
| ! | GATGTTATGATTTTTCCACA+AGG | - | chr2_4:26415824-26415843 | Msa0322860:CDS | 30.0% |
| TAGAACGACCAACATTAATT+TGG | + | chr2_4:26415862-26415881 | None:intergenic | 30.0% | |
| ! | ATAATGTTTGAGGTGTTTCC+AGG | + | chr2_4:26415590-26415609 | None:intergenic | 35.0% |
| ATTAAAGGAACAATCAGTGC+TGG | - | chr2_4:26415752-26415771 | Msa0322860:CDS | 35.0% | |
| AACGTAAACAACATTGTCAG+AGG | + | chr2_4:26415786-26415805 | None:intergenic | 35.0% | |
| TAATCCTCGTCTACAGATAT+TGG | - | chr2_4:26415913-26415932 | Msa0322860:CDS | 35.0% | |
| TAATCCAATATCTGTAGACG+AGG | + | chr2_4:26415920-26415939 | None:intergenic | 35.0% | |
| ! | GTTTGAAAGCGATTTTCCAA+CGG | - | chr2_4:26415946-26415965 | Msa0322860:CDS | 35.0% |
| !! | AAGAAGCTTAAGAGTGTTCT+TGG | - | chr2_4:26416010-26416029 | Msa0322860:CDS | 35.0% |
| TGCTACGCAGAAATCTACTA+CGG | + | chr2_4:26415474-26415493 | None:intergenic | 40.0% | |
| GCAGATTACAATGCACCAAA+TGG | - | chr2_4:26415491-26415510 | Msa0322860:CDS | 40.0% | |
| TTCTTGCAAACCACCATCAA+AGG | - | chr2_4:26415526-26415545 | Msa0322860:CDS | 40.0% | |
| !! | AGCGGCTTTGATAATGTTTG+AGG | + | chr2_4:26415600-26415619 | None:intergenic | 40.0% |
| AAATTGTGAGTCTAATGCGG+TGG | + | chr2_4:26415627-26415646 | None:intergenic | 40.0% | |
| GGGAAATTGTGAGTCTAATG+CGG | + | chr2_4:26415630-26415649 | None:intergenic | 40.0% | |
| GCATTAGACTCACAATTTCC+CGG | - | chr2_4:26415629-26415648 | Msa0322860:CDS | 40.0% | |
| TCACAATTTCCCGGTGTAAA+CGG | - | chr2_4:26415638-26415657 | Msa0322860:CDS | 40.0% | |
| AAGTGGAATAACACCACCAA+CGG | + | chr2_4:26415696-26415715 | None:intergenic | 40.0% | |
| TGGAAATGCAACAATCCTTG+TGG | + | chr2_4:26415842-26415861 | None:intergenic | 40.0% | |
| GTTGCAGTAATAAACTCCGT+TGG | + | chr2_4:26415965-26415984 | None:intergenic | 40.0% | |
| !! | AAGCTTAAGAGTGTTCTTGG+AGG | - | chr2_4:26416013-26416032 | Msa0322860:CDS | 40.0% |
| TTACAATGCACCAAATGGCC+CGG | - | chr2_4:26415496-26415515 | Msa0322860:CDS | 45.0% | |
| GTTTGCAAGAATATCCAGCC+GGG | + | chr2_4:26415517-26415536 | None:intergenic | 45.0% | |
| GGTTTGCAAGAATATCCAGC+CGG | + | chr2_4:26415518-26415537 | None:intergenic | 45.0% | |
| TCATTCGCGGTTACCTTTGA+TGG | + | chr2_4:26415542-26415561 | None:intergenic | 45.0% | |
| ATTCCAAGACCGTTTACACC+GGG | + | chr2_4:26415650-26415669 | None:intergenic | 45.0% | |
| GATTCCAAGACCGTTTACAC+CGG | + | chr2_4:26415651-26415670 | None:intergenic | 45.0% | |
| AAACGGTCTTGGAATCTCCA+TGG | - | chr2_4:26415655-26415674 | Msa0322860:CDS | 45.0% | |
| CGTTTAGATATAGCCGTTGG+TGG | - | chr2_4:26415680-26415699 | Msa0322860:CDS | 45.0% | |
| AACCAATACTTCCGAAGCAC+CGG | + | chr2_4:26415729-26415748 | None:intergenic | 45.0% | |
| !! | AAGAGTGTTCTTGGAGGTAG+TGG | - | chr2_4:26416019-26416038 | Msa0322860:CDS | 45.0% |
| TTCGCGGTTACCTTTGATGG+TGG | + | chr2_4:26415539-26415558 | None:intergenic | 50.0% | |
| GTGGTAGACGAAGTCATTCG+CGG | + | chr2_4:26415555-26415574 | None:intergenic | 50.0% | |
| GCGAATGACTTCGTCTACCA+CGG | - | chr2_4:26415554-26415573 | Msa0322860:CDS | 50.0% | |
| ! | GTTTGAGGTGTTTCCAGGTG+CGG | + | chr2_4:26415585-26415604 | None:intergenic | 50.0% |
| GTCTAATGCGGTGGTAACAG+CGG | + | chr2_4:26415618-26415637 | None:intergenic | 50.0% | |
| TTTCCCGGTGTAAACGGTCT+TGG | - | chr2_4:26415644-26415663 | Msa0322860:CDS | 50.0% | |
| GGCTATATCTAAACGCGCCA+TGG | + | chr2_4:26415675-26415694 | None:intergenic | 50.0% | |
| GCGCGTTTAGATATAGCCGT+TGG | - | chr2_4:26415677-26415696 | Msa0322860:CDS | 50.0% | |
| ATTCCACTTCACACACACCC+CGG | - | chr2_4:26415707-26415726 | Msa0322860:CDS | 50.0% | |
| ! | ACCAATACTTCCGAAGCACC+GGG | + | chr2_4:26415728-26415747 | None:intergenic | 50.0% |
| GAATATCCAGCCGGGCCATT+TGG | + | chr2_4:26415509-26415528 | None:intergenic | 55.0% | |
| !! | CCAATACTTCCGAAGCACCG+GGG | + | chr2_4:26415727-26415746 | None:intergenic | 55.0% |
| AATGCACCAAATGGCCCGGC+TGG | - | chr2_4:26415500-26415519 | Msa0322860:CDS | 60.0% | |
| AGGTGTTTCCAGGTGCGGCT+AGG | + | chr2_4:26415580-26415599 | None:intergenic | 60.0% | |
| TCACACACACCCCGGTGCTT+CGG | - | chr2_4:26415715-26415734 | Msa0322860:CDS | 60.0% | |
| ! | CCCCGGTGCTTCGGAAGTAT+TGG | - | chr2_4:26415724-26415743 | Msa0322860:CDS | 60.0% |
| GCACCGGGGTGTGTGTGAAG+TGG | + | chr2_4:26415713-26415732 | None:intergenic | 65.0% | |
| TACCACGGCCTAGCCGCACC+TGG | - | chr2_4:26415569-26415588 | Msa0322860:CDS | 70.0% | |
| TTCCAGGTGCGGCTAGGCCG+TGG | + | chr2_4:26415574-26415593 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 26415413 | 26416045 | 26415413 | ID=Msa0322860;Name=Msa0322860 |
| chr2_4 | mRNA | 26415413 | 26416045 | 26415413 | ID=Msa0322860-mRNA-1;Parent=Msa0322860;Name=Msa0322860-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|-1|0|1|-1|1|1|0|210 |
| chr2_4 | exon | 26415413 | 26416045 | 26415413 | ID=Msa0322860-mRNA-1:exon:9213;Parent=Msa0322860-mRNA-1 |
| chr2_4 | CDS | 26415413 | 26416045 | 26415413 | ID=Msa0322860-mRNA-1:cds;Parent=Msa0322860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
