Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194380 | KEH36676.1 | 73.762 | 202 | 26 | 1 | 4 | 205 | 130 | 304 | 9.07e-96 | 291 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194380 | sp|Q9C7N5|GDL14_ARATH | 37.759 | 241 | 106 | 4 | 4 | 201 | 124 | 363 | 1.03e-48 | 165 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194380 | A0A072V4T1 | 73.762 | 202 | 26 | 1 | 4 | 205 | 130 | 304 | 4.33e-96 | 291 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036430 | Msa0194380 | 0.814877 | 1.231656e-51 | -8.615850e-47 |
| Msa0084500 | Msa0194380 | 0.843271 | 1.553037e-58 | -8.615850e-47 |
| Msa0130570 | Msa0194380 | 0.820914 | 5.331043e-53 | -8.615850e-47 |
| Msa0156250 | Msa0194380 | 0.805077 | 1.588376e-49 | -8.615850e-47 |
| Msa0176470 | Msa0194380 | 0.847217 | 1.330066e-59 | -8.615850e-47 |
| Msa0194380 | Msa0203030 | 0.829131 | 6.112347e-55 | -8.615850e-47 |
| Msa0194380 | Msa0206800 | 0.832561 | 8.811376e-56 | -8.615850e-47 |
| Msa0194380 | Msa0219190 | 0.816446 | 5.507495e-52 | -8.615850e-47 |
| Msa0194380 | Msa0236110 | 0.915720 | 4.207893e-85 | -8.615850e-47 |
| Msa0194380 | Msa0242540 | 0.808747 | 2.659904e-50 | -8.615850e-47 |
| Msa0194380 | Msa0273990 | 0.895784 | 6.898307e-76 | -8.615850e-47 |
| Msa0194380 | Msa0277290 | 0.830610 | 2.665742e-55 | -8.615850e-47 |
| Msa0194380 | Msa0280750 | 0.814839 | 1.255481e-51 | -8.615850e-47 |
| Msa0194380 | Msa0288200 | 0.826489 | 2.637187e-54 | -8.615850e-47 |
| Msa0194380 | Msa0298240 | 0.835253 | 1.868588e-56 | -8.615850e-47 |
| Msa0194380 | Msa0314630 | 0.920972 | 6.490133e-88 | -8.615850e-47 |
| Msa0194380 | Msa0322830 | 0.838458 | 2.841618e-57 | -8.615850e-47 |
| Msa0194380 | Msa0322840 | 0.827620 | 1.414733e-54 | -8.615850e-47 |
| Msa0194380 | Msa0322860 | 0.846457 | 2.146585e-59 | -8.615850e-47 |
| Msa0194380 | Msa0326540 | 0.820921 | 5.312373e-53 | -8.615850e-47 |
| Msa0194380 | Msa0329620 | 0.811838 | 5.731254e-51 | -8.615850e-47 |
| Msa0194380 | Msa0331530 | 0.834318 | 3.212356e-56 | -8.615850e-47 |
| Msa0194380 | Msa0331540 | 0.840948 | 6.393002e-58 | -8.615850e-47 |
| Msa0194380 | Msa0351770 | 0.821077 | 4.891360e-53 | -8.615850e-47 |
| Msa0194380 | Msa0359250 | 0.822158 | 2.751638e-53 | -8.615850e-47 |
| Msa0194380 | Msa0373960 | 0.854301 | 1.348591e-61 | -8.615850e-47 |
| Msa0194380 | Msa0382010 | 0.810949 | 8.936498e-51 | -8.615850e-47 |
| Msa0194380 | Msa0406000 | 0.819126 | 1.368190e-52 | -8.615850e-47 |
| Msa0194380 | Msa0423100 | 0.848446 | 6.098877e-60 | -8.615850e-47 |
| Msa0194380 | Msa0424330 | 0.813008 | 3.180438e-51 | -8.615850e-47 |
| Msa0194380 | Msa0441590 | 0.809120 | 2.214099e-50 | -8.615850e-47 |
| Msa0194380 | Msa0451400 | 0.830532 | 2.785874e-55 | -8.615850e-47 |
| Msa0194380 | Msa0469260 | 0.860319 | 2.244558e-63 | -8.615850e-47 |
| Msa0194380 | Msa0485330 | 0.800864 | 1.179772e-48 | -8.615850e-47 |
| Msa0194380 | Msa0492190 | 0.813213 | 2.868620e-51 | -8.615850e-47 |
| Msa0194380 | Msa0520510 | 0.854190 | 1.451858e-61 | -8.615850e-47 |
| Msa0194380 | Msa0534930 | 0.813580 | 2.382235e-51 | -8.615850e-47 |
| Msa0194380 | Msa0535040 | 0.816503 | 5.348144e-52 | -8.615850e-47 |
| Msa0194380 | Msa0575740 | 0.835664 | 1.471122e-56 | -8.615850e-47 |
| Msa0194380 | Msa0591790 | 0.819396 | 1.187538e-52 | -8.615850e-47 |
| Msa0194380 | Msa0591800 | 0.827940 | 1.185063e-54 | -8.615850e-47 |
| Msa0194380 | Msa0663680 | 0.807542 | 4.803189e-50 | -8.615850e-47 |
| Msa0194380 | Msa0667850 | 0.822229 | 2.649136e-53 | -8.615850e-47 |
| Msa0194380 | Msa0669840 | 0.829761 | 4.296778e-55 | -8.615850e-47 |
| Msa0194380 | Msa0691160 | 0.815474 | 9.077134e-52 | -8.615850e-47 |
| Msa0194380 | Msa0742180 | 0.835592 | 1.534424e-56 | -8.615850e-47 |
| Msa0194380 | Msa0823400 | 0.835721 | 1.423185e-56 | -8.615850e-47 |
| Msa0194380 | Msa0860170 | 0.811073 | 8.401771e-51 | -8.615850e-47 |
| Msa0194380 | Msa0862310 | 0.813345 | 2.683507e-51 | -8.615850e-47 |
| Msa0194380 | Msa0885060 | 0.810837 | 9.450159e-51 | -8.615850e-47 |
| Msa0194380 | Msa0929870 | 0.828532 | 8.531605e-55 | -8.615850e-47 |
| Msa0194380 | Msa0941960 | 0.801388 | 9.216728e-49 | -8.615850e-47 |
| Msa0194380 | Msa0946210 | 0.807772 | 4.292839e-50 | -8.615850e-47 |
| Msa0194380 | Msa0961560 | 0.805840 | 1.099274e-49 | -8.615850e-47 |
| Msa0194380 | Msa0965310 | 0.826709 | 2.337668e-54 | -8.615850e-47 |
| Msa0194380 | Msa0973250 | 0.804776 | 1.836048e-49 | -8.615850e-47 |
| Msa0194380 | Msa0979510 | 0.835264 | 1.856311e-56 | -8.615850e-47 |
| Msa0194380 | Msa0999300 | 0.806000 | 1.017095e-49 | -8.615850e-47 |
| Msa0194380 | Msa0999340 | 0.854446 | 1.224438e-61 | -8.615850e-47 |
| Msa0194380 | Msa0999350 | 0.847417 | 1.171919e-59 | -8.615850e-47 |
| Msa0194380 | Msa0999360 | 0.832195 | 1.085987e-55 | -8.615850e-47 |
| Msa0194380 | Msa0999390 | 0.835548 | 1.573741e-56 | -8.615850e-47 |
| Msa0194380 | Msa0999400 | 0.840727 | 7.307097e-58 | -8.615850e-47 |
| Msa0194380 | Msa0999410 | 0.834563 | 2.788504e-56 | -8.615850e-47 |
| Msa0194380 | Msa1034680 | 0.802061 | 6.708360e-49 | -8.615850e-47 |
| Msa0194380 | Msa1037890 | 0.800587 | 1.343856e-48 | -8.615850e-47 |
| Msa0194380 | Msa1037900 | 0.800163 | 1.639168e-48 | -8.615850e-47 |
| Msa0194380 | Msa1073340 | 0.841816 | 3.777135e-58 | -8.615850e-47 |
| Msa0194380 | Msa1092020 | 0.821643 | 3.620509e-53 | -8.615850e-47 |
| Msa0194380 | Msa1113850 | 0.817070 | 3.990637e-52 | -8.615850e-47 |
| Msa0194380 | Msa1135380 | 0.825907 | 3.628031e-54 | -8.615850e-47 |
| Msa0194380 | Msa1145020 | 0.827387 | 1.609116e-54 | -8.615850e-47 |
| Msa0194380 | Msa1169990 | 0.806547 | 7.799867e-50 | -8.615850e-47 |
| Msa0194380 | Msa1177400 | 0.808188 | 3.501446e-50 | -8.615850e-47 |
| Msa0194380 | Msa1201110 | 0.802126 | 6.505069e-49 | -8.615850e-47 |
| Msa0194380 | Msa1201160 | 0.808938 | 2.421268e-50 | -8.615850e-47 |
| Msa0194380 | Msa1228190 | 0.856672 | 2.745979e-62 | -8.615850e-47 |
| Msa0194380 | Msa1262350 | 0.803702 | 3.073266e-49 | -8.615850e-47 |
| Msa0194380 | Msa1271260 | 0.854000 | 1.646900e-61 | -8.615850e-47 |
| Msa0194380 | Msa1292040 | 0.807306 | 5.392070e-50 | -8.615850e-47 |
| Msa0194380 | Msa1294290 | 0.818298 | 2.108181e-52 | -8.615850e-47 |
| Msa0194380 | Msa1339440 | 0.804421 | 2.178015e-49 | -8.615850e-47 |
| Msa0194380 | Msa1345420 | 0.864712 | 9.981655e-65 | -8.615850e-47 |
| Msa0194380 | Msa1379970 | 0.806561 | 7.746987e-50 | -8.615850e-47 |
| Msa0194380 | Msa1389050 | 0.814320 | 1.635745e-51 | -8.615850e-47 |
| Msa0194380 | Msa1420060 | 0.833172 | 6.212977e-56 | -8.615850e-47 |
| Msa0194380 | Msa1421550 | 0.843390 | 1.443344e-58 | -8.615850e-47 |
| Msa0194380 | Msa1435480 | 0.885182 | 1.013770e-71 | -8.615850e-47 |
| Msa0194380 | Msa1442630 | 0.813182 | 2.913860e-51 | -8.615850e-47 |
| Msa0194380 | Msa1458910 | 0.851984 | 6.216542e-61 | -8.615850e-47 |
| Msa0194380 | Msa1462530 | 0.821299 | 4.345895e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194380 | MtrunA17_Chr2g0284921 | 54.310 | 232 | 72 | 1 | 4 | 201 | 129 | 360 | 1.20e-82 | 249 |
| Msa0194380 | MtrunA17_Chr2g0284991 | 47.679 | 237 | 88 | 1 | 1 | 201 | 123 | 359 | 8.23e-71 | 219 |
| Msa0194380 | MtrunA17_Chr2g0284951 | 47.083 | 240 | 86 | 4 | 1 | 204 | 123 | 357 | 7.50e-68 | 212 |
| Msa0194380 | MtrunA17_Chr2g0285001 | 45.188 | 239 | 95 | 1 | 2 | 204 | 125 | 363 | 1.96e-67 | 211 |
| Msa0194380 | MtrunA17_Chr3g0085881 | 47.414 | 232 | 84 | 4 | 4 | 201 | 125 | 352 | 2.25e-64 | 202 |
| Msa0194380 | MtrunA17_Chr2g0284941 | 49.091 | 220 | 93 | 3 | 2 | 204 | 124 | 341 | 5.12e-64 | 201 |
| Msa0194380 | MtrunA17_Chr8g0380031 | 41.991 | 231 | 99 | 5 | 4 | 201 | 177 | 405 | 1.94e-58 | 189 |
| Msa0194380 | MtrunA17_Chr2g0284931 | 42.128 | 235 | 85 | 3 | 4 | 204 | 5 | 222 | 4.77e-54 | 172 |
| Msa0194380 | MtrunA17_Chr8g0380041 | 36.929 | 241 | 108 | 5 | 4 | 201 | 123 | 362 | 7.88e-48 | 160 |
| Msa0194380 | MtrunA17_Chr2g0285041 | 86.585 | 82 | 11 | 0 | 4 | 85 | 42 | 123 | 1.52e-44 | 145 |
| Msa0194380 | MtrunA17_Chr3g0086641 | 34.025 | 241 | 114 | 7 | 4 | 201 | 131 | 369 | 1.05e-41 | 144 |
| Msa0194380 | MtrunA17_Chr2g0285061 | 33.610 | 241 | 116 | 5 | 4 | 201 | 125 | 364 | 6.34e-41 | 142 |
| Msa0194380 | MtrunA17_Chr3g0077571 | 36.279 | 215 | 91 | 6 | 29 | 201 | 146 | 356 | 2.15e-39 | 138 |
| Msa0194380 | MtrunA17_Chr2g0285031 | 80.519 | 77 | 15 | 0 | 129 | 205 | 5 | 81 | 3.18e-38 | 127 |
| Msa0194380 | MtrunA17_Chr7g0275011 | 30.672 | 238 | 112 | 5 | 10 | 196 | 125 | 360 | 1.14e-30 | 115 |
| Msa0194380 | MtrunA17_Chr3g0077581 | 30.453 | 243 | 120 | 7 | 4 | 200 | 129 | 368 | 5.39e-30 | 113 |
| Msa0194380 | MtrunA17_Chr3g0131321 | 31.174 | 247 | 116 | 9 | 4 | 201 | 127 | 368 | 2.05e-28 | 109 |
| Msa0194380 | MtrunA17_Chr7g0275021 | 32.642 | 193 | 88 | 5 | 24 | 174 | 148 | 340 | 4.27e-28 | 108 |
| Msa0194380 | MtrunA17_Chr7g0275001 | 30.568 | 229 | 109 | 6 | 14 | 199 | 134 | 355 | 1.43e-27 | 107 |
| Msa0194380 | MtrunA17_Chr6g0455661 | 30.000 | 240 | 123 | 5 | 4 | 201 | 235 | 471 | 1.82e-26 | 105 |
| Msa0194380 | MtrunA17_Chr7g0215961 | 30.244 | 205 | 99 | 4 | 37 | 199 | 147 | 349 | 1.87e-26 | 103 |
| Msa0194380 | MtrunA17_Chr6g0459921 | 30.000 | 240 | 123 | 5 | 4 | 201 | 124 | 360 | 2.26e-26 | 103 |
| Msa0194380 | MtrunA17_Chr7g0274991 | 29.358 | 218 | 110 | 4 | 24 | 199 | 147 | 362 | 3.80e-26 | 103 |
| Msa0194380 | MtrunA17_Chr6g0457921 | 30.729 | 192 | 91 | 2 | 27 | 176 | 147 | 338 | 1.23e-25 | 102 |
| Msa0194380 | MtrunA17_Chr4g0008851 | 30.516 | 213 | 98 | 6 | 20 | 182 | 142 | 354 | 1.94e-25 | 101 |
| Msa0194380 | MtrunA17_Chr1g0189901 | 30.622 | 209 | 97 | 5 | 11 | 171 | 126 | 334 | 2.01e-25 | 101 |
| Msa0194380 | MtrunA17_Chr1g0189891 | 31.019 | 216 | 111 | 5 | 20 | 199 | 140 | 353 | 2.44e-25 | 100 |
| Msa0194380 | MtrunA17_Chr1g0189931 | 30.000 | 210 | 103 | 4 | 29 | 196 | 151 | 358 | 3.83e-25 | 100 |
| Msa0194380 | MtrunA17_Chr5g0434621 | 30.841 | 214 | 104 | 6 | 12 | 184 | 129 | 339 | 5.38e-25 | 100 |
| Msa0194380 | MtrunA17_Chr1g0182811 | 30.729 | 192 | 89 | 5 | 29 | 176 | 153 | 344 | 6.96e-25 | 100 |
| Msa0194380 | MtrunA17_Chr4g0017431 | 29.386 | 228 | 113 | 7 | 20 | 201 | 137 | 362 | 2.11e-24 | 98.6 |
| Msa0194380 | MtrunA17_Chr4g0060811 | 31.068 | 206 | 91 | 6 | 16 | 178 | 140 | 337 | 2.63e-22 | 92.8 |
| Msa0194380 | MtrunA17_Chr3g0092131 | 29.688 | 192 | 91 | 4 | 29 | 178 | 144 | 333 | 9.12e-22 | 91.3 |
| Msa0194380 | MtrunA17_Chr4g0068441 | 28.251 | 223 | 113 | 6 | 24 | 201 | 147 | 367 | 3.87e-21 | 89.7 |
| Msa0194380 | MtrunA17_Chr3g0085231 | 30.244 | 205 | 92 | 5 | 36 | 201 | 157 | 349 | 7.04e-20 | 85.9 |
| Msa0194380 | MtrunA17_Chr2g0320671 | 25.806 | 217 | 112 | 7 | 7 | 178 | 128 | 340 | 3.23e-17 | 78.6 |
| Msa0194380 | MtrunA17_Chr5g0396511 | 25.523 | 239 | 132 | 7 | 4 | 199 | 141 | 376 | 9.46e-17 | 77.4 |
| Msa0194380 | MtrunA17_Chr2g0294301 | 25.112 | 223 | 120 | 6 | 24 | 201 | 147 | 367 | 2.00e-15 | 73.6 |
| Msa0194380 | MtrunA17_Chr2g0284981 | 48.611 | 72 | 37 | 0 | 130 | 201 | 8 | 79 | 2.98e-15 | 68.6 |
| Msa0194380 | MtrunA17_Chr8g0370961 | 24.242 | 231 | 114 | 8 | 20 | 200 | 24 | 243 | 2.58e-14 | 69.3 |
| Msa0194380 | MtrunA17_Chr2g0330781 | 23.963 | 217 | 117 | 7 | 7 | 178 | 129 | 342 | 5.87e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194380 | AT1G29660.1 | 37.759 | 241 | 106 | 4 | 4 | 201 | 124 | 363 | 1.05e-49 | 165 |
| Msa0194380 | AT1G29670.1 | 35.417 | 240 | 112 | 4 | 4 | 201 | 124 | 362 | 6.28e-46 | 155 |
| Msa0194380 | AT1G29670.2 | 35.417 | 240 | 112 | 4 | 4 | 201 | 192 | 430 | 2.64e-45 | 155 |
| Msa0194380 | AT5G45670.1 | 33.750 | 240 | 115 | 5 | 4 | 200 | 122 | 360 | 1.54e-41 | 144 |
| Msa0194380 | AT4G18970.1 | 34.025 | 241 | 115 | 5 | 4 | 201 | 121 | 360 | 2.94e-40 | 140 |
| Msa0194380 | AT4G18970.2 | 34.025 | 241 | 115 | 5 | 4 | 201 | 121 | 360 | 1.13e-39 | 140 |
| Msa0194380 | AT1G33811.1 | 32.245 | 245 | 115 | 6 | 4 | 200 | 127 | 368 | 1.06e-38 | 137 |
| Msa0194380 | AT1G71691.1 | 31.169 | 231 | 113 | 5 | 12 | 200 | 54 | 280 | 8.64e-37 | 130 |
| Msa0194380 | AT1G71691.2 | 31.169 | 231 | 113 | 5 | 12 | 200 | 155 | 381 | 1.74e-35 | 129 |
| Msa0194380 | AT4G30140.1 | 32.759 | 232 | 109 | 6 | 4 | 199 | 126 | 346 | 3.94e-31 | 116 |
| Msa0194380 | AT2G19050.1 | 33.990 | 203 | 92 | 5 | 37 | 201 | 150 | 348 | 4.64e-31 | 116 |
| Msa0194380 | AT2G19060.1 | 31.760 | 233 | 108 | 5 | 4 | 196 | 123 | 344 | 7.57e-31 | 115 |
| Msa0194380 | AT2G19010.1 | 30.932 | 236 | 114 | 4 | 4 | 201 | 123 | 347 | 1.09e-29 | 112 |
| Msa0194380 | AT2G19010.2 | 31.356 | 236 | 113 | 5 | 4 | 201 | 153 | 377 | 1.80e-29 | 112 |
| Msa0194380 | AT5G08460.1 | 29.098 | 244 | 124 | 7 | 4 | 201 | 144 | 384 | 3.64e-29 | 112 |
| Msa0194380 | AT5G33370.1 | 28.958 | 259 | 122 | 8 | 1 | 199 | 103 | 359 | 9.55e-28 | 107 |
| Msa0194380 | AT5G15720.3 | 33.043 | 230 | 102 | 7 | 22 | 201 | 105 | 332 | 1.82e-27 | 106 |
| Msa0194380 | AT5G15720.1 | 33.478 | 230 | 101 | 7 | 22 | 201 | 136 | 363 | 7.45e-27 | 105 |
| Msa0194380 | AT2G19050.2 | 51.111 | 90 | 44 | 0 | 37 | 126 | 150 | 239 | 1.13e-25 | 100 |
| Msa0194380 | AT1G71250.1 | 28.333 | 240 | 124 | 8 | 4 | 199 | 135 | 370 | 1.44e-25 | 102 |
| Msa0194380 | AT3G04290.1 | 29.767 | 215 | 107 | 4 | 24 | 196 | 143 | 355 | 1.64e-25 | 102 |
| Msa0194380 | AT1G71691.3 | 36.800 | 125 | 76 | 3 | 12 | 136 | 155 | 276 | 1.88e-22 | 92.8 |
| Msa0194380 | AT1G74460.1 | 30.348 | 201 | 90 | 5 | 23 | 178 | 138 | 333 | 1.36e-21 | 91.3 |
| Msa0194380 | AT4G28780.1 | 27.041 | 196 | 99 | 4 | 24 | 176 | 145 | 339 | 7.68e-21 | 89.4 |
| Msa0194380 | AT5G18430.1 | 28.365 | 208 | 100 | 5 | 24 | 182 | 143 | 350 | 7.60e-20 | 86.3 |
| Msa0194380 | AT5G37690.2 | 27.273 | 187 | 93 | 4 | 33 | 178 | 143 | 327 | 1.30e-19 | 85.5 |
| Msa0194380 | AT5G37690.1 | 27.273 | 187 | 93 | 4 | 33 | 178 | 151 | 335 | 1.34e-19 | 85.5 |
| Msa0194380 | AT5G15720.2 | 42.373 | 118 | 60 | 2 | 22 | 131 | 136 | 253 | 2.43e-19 | 84.3 |
| Msa0194380 | AT5G33370.2 | 35.374 | 147 | 76 | 5 | 1 | 128 | 103 | 249 | 4.10e-19 | 84.0 |
| Msa0194380 | AT3G50400.1 | 29.500 | 200 | 94 | 6 | 26 | 178 | 153 | 352 | 1.00e-17 | 80.5 |
| Msa0194380 | AT5G22810.1 | 27.397 | 219 | 109 | 7 | 7 | 178 | 132 | 347 | 1.73e-16 | 77.0 |
| Msa0194380 | AT3G53100.1 | 27.500 | 200 | 97 | 6 | 24 | 178 | 143 | 339 | 4.08e-16 | 75.9 |
| Msa0194380 | AT5G03820.1 | 25.688 | 218 | 113 | 7 | 7 | 178 | 131 | 345 | 6.88e-14 | 69.7 |
| Msa0194380 | AT5G03820.2 | 24.771 | 218 | 115 | 6 | 7 | 178 | 159 | 373 | 9.92e-14 | 69.3 |
| Msa0194380 | AT4G26790.1 | 26.961 | 204 | 99 | 8 | 29 | 185 | 148 | 348 | 2.42e-12 | 65.1 |
| Msa0194380 | AT4G26790.2 | 26.961 | 204 | 99 | 8 | 29 | 185 | 148 | 348 | 2.42e-12 | 65.1 |
| Msa0194380 | AT5G03810.1 | 23.502 | 217 | 118 | 6 | 7 | 178 | 128 | 341 | 2.08e-11 | 62.4 |
| Msa0194380 | AT4G16230.1 | 33.010 | 103 | 67 | 2 | 24 | 124 | 143 | 245 | 4.99e-11 | 60.8 |
Find 39 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTGTCTTGACTTAATTTA+TGG | 0.077141 | 2_1:+10335341 | None:intergenic |
| GGACAGTCTTTGTATGATTT+TGG | 0.142004 | 2_1:-10336042 | Msa0194380:intron |
| TGCGACTTGTTGGGTAAAAT+TGG | 0.181701 | 2_1:+10337417 | None:intergenic |
| TCTAAGTTTGATAACAATTC+TGG | 0.268560 | 2_1:+10337529 | None:intergenic |
| AAAACGAAAACATTTCTATT+GGG | 0.290854 | 2_1:+10335483 | None:intergenic |
| CCAGTATTCTTCTTATATAA+AGG | 0.291292 | 2_1:-10337357 | Msa0194380:intron |
| GCACTTATTTAGATAATTCA+TGG | 0.330650 | 2_1:+10337493 | None:intergenic |
| CAGGGTGCTAATGTCGCTTT+GGG | 0.330720 | 2_1:-10337584 | Msa0194380:CDS |
| GCAGGGTGCTAATGTCGCTT+TGG | 0.358650 | 2_1:-10337585 | Msa0194380:intron |
| GCGACTTGTTGGGTAAAATT+GGG | 0.359646 | 2_1:+10337418 | None:intergenic |
| CATGTTGGAATTGGCCTTAT+AGG | 0.367186 | 2_1:-10336003 | Msa0194380:CDS |
| AGAATTGTTATCAAACTTAG+AGG | 0.376223 | 2_1:-10337527 | Msa0194380:CDS |
| GTGTTATAGATGCGACTTGT+TGG | 0.391018 | 2_1:+10337407 | None:intergenic |
| CCTTTATATAAGAAGAATAC+TGG | 0.401167 | 2_1:+10337357 | None:intergenic |
| AAACTCGTGCATGTTGGAAT+TGG | 0.402053 | 2_1:-10336012 | Msa0194380:CDS |
| TGCTTGTATTATGTGAATAT+TGG | 0.411716 | 2_1:-10337473 | Msa0194380:CDS |
| TTGGGGCATGGAGTTGAATC+AGG | 0.418156 | 2_1:+10335501 | None:intergenic |
| TGTTGTCCAGTGAGGTCAGA+TGG | 0.445100 | 2_1:-10335534 | Msa0194380:CDS |
| TGTTATAGATGCGACTTGTT+GGG | 0.450708 | 2_1:+10337408 | None:intergenic |
| TCCATTGGATAGGTCGTCAT+TGG | 0.452960 | 2_1:+10335387 | None:intergenic |
| AATGTGGAGTGCAACCTATA+AGG | 0.471432 | 2_1:+10335989 | None:intergenic |
| TAGATTTAATATAATGGCTA+GGG | 0.478506 | 2_1:-10338138 | None:intergenic |
| TTAGATTTAATATAATGGCT+AGG | 0.481833 | 2_1:-10338139 | None:intergenic |
| AAACGAAAACATTTCTATTG+GGG | 0.544145 | 2_1:+10335484 | None:intergenic |
| CACATCCCATCTGACCTCAC+TGG | 0.554719 | 2_1:+10335528 | None:intergenic |
| CGACTTGTTGGGTAAAATTG+GGG | 0.556831 | 2_1:+10337419 | None:intergenic |
| GAGAAAGTTCACAGCTGATG+TGG | 0.560323 | 2_1:+10335443 | None:intergenic |
| GCAAGAAAACTCGTGCATGT+TGG | 0.562092 | 2_1:-10336018 | Msa0194380:CDS |
| ATTGCTACTCGAGGGACAGA+TGG | 0.569780 | 2_1:-10335964 | Msa0194380:CDS |
| AAAACATTTCTATTGGGGCA+TGG | 0.572507 | 2_1:+10335489 | None:intergenic |
| GTTGTCCAGTGAGGTCAGAT+GGG | 0.580131 | 2_1:-10335533 | Msa0194380:CDS |
| CACATTCAATTGCTACTCGA+GGG | 0.607858 | 2_1:-10335972 | Msa0194380:CDS |
| CCACATTCAATTGCTACTCG+AGG | 0.609254 | 2_1:-10335973 | Msa0194380:CDS |
| AAGAACTTCAGCATATTGCT+CGG | 0.615665 | 2_1:+10337385 | None:intergenic |
| TCTGACCTCACTGGACAACA+AGG | 0.616362 | 2_1:+10335537 | None:intergenic |
| CCTCGAGTAGCAATTGAATG+TGG | 0.637737 | 2_1:+10335973 | None:intergenic |
| TCCAATGACGACCTATCCAA+TGG | 0.644350 | 2_1:-10335388 | Msa0194380:CDS |
| AGAAAGTTCACAGCTGATGT+GGG | 0.668712 | 2_1:+10335444 | None:intergenic |
| GTGCTCCTTGTTGTCCAGTG+AGG | 0.670118 | 2_1:-10335542 | Msa0194380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATAAAATTTTATAAAT+TGG | + | chr2_1:10336970-10336989 | None:intergenic | 0.0% |
| !!! | GAATATATATAATATTTTTG+AGG | + | chr2_1:10335821-10335840 | None:intergenic | 10.0% |
| !! | AAAAAAAATTATATTTGTCA+TGG | - | chr2_1:10336999-10337018 | Msa0194380:intron | 10.0% |
| !! | AAAGTAGTAAAAAATAGAAT+GGG | + | chr2_1:10335718-10335737 | None:intergenic | 15.0% |
| !! | AAAAGTAGTAAAAAATAGAA+TGG | + | chr2_1:10335719-10335738 | None:intergenic | 15.0% |
| !!! | AAATTGATTTTTTTTTTACG+AGG | + | chr2_1:10336709-10336728 | None:intergenic | 15.0% |
| !!! | AGAATTTTATGTTTTGTAAA+GGG | - | chr2_1:10336783-10336802 | Msa0194380:intron | 15.0% |
| !!! | AATAATTGTCTGAGATTAAA+AGG | - | chr2_1:10335658-10335677 | Msa0194380:intron | 20.0% |
| !! | AAGTAGTAAAAAATAGAATG+GGG | + | chr2_1:10335717-10335736 | None:intergenic | 20.0% |
| !!! | TTTTAGAGCTTAAAATGTAT+TGG | + | chr2_1:10336577-10336596 | None:intergenic | 20.0% |
| !!! | CAGAATTTTATGTTTTGTAA+AGG | - | chr2_1:10336782-10336801 | Msa0194380:intron | 20.0% |
| !!! | GAATTTTATGTTTTGTAAAG+GGG | - | chr2_1:10336784-10336803 | Msa0194380:intron | 20.0% |
| !!! | ATTTTATAAATTGGTGTGTT+TGG | + | chr2_1:10336961-10336980 | None:intergenic | 20.0% |
| !!! | ACAAATACATGATTTTCTTA+TGG | + | chr2_1:10337053-10337072 | None:intergenic | 20.0% |
| !!! | AACTATTCTGATAATGATTT+CGG | - | chr2_1:10337163-10337182 | Msa0194380:intron | 20.0% |
| !! | TATATATTCAAAATATACCC+CGG | - | chr2_1:10337188-10337207 | Msa0194380:intron | 20.0% |
| !! | TGAAGTTTGAAAATGTAATA+GGG | - | chr2_1:10337365-10337384 | Msa0194380:CDS | 20.0% |
| !!! | TTTTTCAACAATGATTTGAA+TGG | - | chr2_1:10337402-10337421 | Msa0194380:CDS | 20.0% |
| !!! | TAGATTTAGAATTTGGATAT+CGG | + | chr2_1:10337618-10337637 | None:intergenic | 20.0% |
| !!! | ACAAAGATAGATTTAGAATT+TGG | + | chr2_1:10337625-10337644 | None:intergenic | 20.0% |
| !! | GATGTATCTAATTCAAAAAT+TGG | + | chr2_1:10337784-10337803 | None:intergenic | 20.0% |
| !!! | CAATTGATAATGTATGATAT+AGG | - | chr2_1:10337852-10337871 | Msa0194380:intron | 20.0% |
| !!! | ACTATGATATTTTGTATTTC+AGG | - | chr2_1:10337899-10337918 | Msa0194380:intron | 20.0% |
| !! | AAAACGAAAACATTTCTATT+GGG | + | chr2_1:10337998-10338017 | None:intergenic | 20.0% |
| !! | AAAAACGAAAACATTTCTAT+TGG | + | chr2_1:10337999-10338018 | None:intergenic | 20.0% |
| !!! | AATGTTTTCGTTTTTTATGA+TGG | - | chr2_1:10338004-10338023 | Msa0194380:intron | 20.0% |
| ! | GAGAAAAATTGAGATAAAAG+TGG | - | chr2_1:10335372-10335391 | Msa0194380:CDS | 25.0% |
| ! | CTATATATGCAATATTTGCA+GGG | - | chr2_1:10335876-10335895 | Msa0194380:intron | 25.0% |
| !! | TCTAAGTTTGATAACAATTC+TGG | + | chr2_1:10335952-10335971 | None:intergenic | 25.0% |
| ! | AGAATTGTTATCAAACTTAG+AGG | - | chr2_1:10335951-10335970 | Msa0194380:CDS | 25.0% |
| ! | GCACTTATTTAGATAATTCA+TGG | + | chr2_1:10335988-10336007 | None:intergenic | 25.0% |
| ! | TGCTTGTATTATGTGAATAT+TGG | - | chr2_1:10336005-10336024 | Msa0194380:CDS | 25.0% |
| ! | CCTTTATATAAGAAGAATAC+TGG | + | chr2_1:10336124-10336143 | None:intergenic | 25.0% |
| ! | CCAGTATTCTTCTTATATAA+AGG | - | chr2_1:10336121-10336140 | Msa0194380:intron | 25.0% |
| ! | CTACATATCAACCATAAAAT+TGG | + | chr2_1:10336348-10336367 | None:intergenic | 25.0% |
| ! | TCATGGATCCTAAATATATT+AGG | - | chr2_1:10336846-10336865 | Msa0194380:intron | 25.0% |
| ! | GAGGTAAACCTAATATATTT+AGG | + | chr2_1:10336857-10336876 | None:intergenic | 25.0% |
| !! | AATTTAGTTTACTACAACAG+AGG | + | chr2_1:10336876-10336895 | None:intergenic | 25.0% |
| ! | AACTTATCGTTCATATCATT+TGG | - | chr2_1:10336896-10336915 | Msa0194380:intron | 25.0% |
| ! | ATCATTTGGATAAATGTTCA+TGG | - | chr2_1:10336910-10336929 | Msa0194380:intron | 25.0% |
| !! | CATTGCATCAATAATTTTTG+TGG | + | chr2_1:10337026-10337045 | None:intergenic | 25.0% |
| ! | GTGAAGTTTGAAAATGTAAT+AGG | - | chr2_1:10337364-10337383 | Msa0194380:CDS | 25.0% |
| !!! | ATTTGAATGGCATTTTTTTG+TGG | - | chr2_1:10337415-10337434 | Msa0194380:CDS | 25.0% |
| ! | AAACGAAAACATTTCTATTG+GGG | + | chr2_1:10337997-10338016 | None:intergenic | 25.0% |
| !!! | TTGTTTTATATCCATTGGAT+AGG | + | chr2_1:10338104-10338123 | None:intergenic | 25.0% |
| ! | CACACATTTGATGACATTAA+GGG | + | chr2_1:10335415-10335434 | None:intergenic | 30.0% |
| ! | ACACACATTTGATGACATTA+AGG | + | chr2_1:10335416-10335435 | None:intergenic | 30.0% |
| ATATGCAAACATTAGTGACT+CGG | - | chr2_1:10335530-10335549 | Msa0194380:CDS | 30.0% | |
| GCTATATATGCAATATTTGC+AGG | - | chr2_1:10335875-10335894 | Msa0194380:intron | 30.0% | |
| ! | TTCTGGCAAAGATGATTTTA+TGG | + | chr2_1:10335935-10335954 | None:intergenic | 30.0% |
| ATCAACCATAAAATTGGTAG+CGG | + | chr2_1:10336342-10336361 | None:intergenic | 30.0% | |
| CATAATATAGTACCTAACAG+AGG | - | chr2_1:10336509-10336528 | Msa0194380:intron | 30.0% | |
| !! | GATAAATGTTCATGGTTTTG+TGG | - | chr2_1:10336918-10336937 | Msa0194380:intron | 30.0% |
| GTAAAAACTTGTGTTATGGA+GGG | + | chr2_1:10337110-10337129 | None:intergenic | 30.0% | |
| TGTAAAAACTTGTGTTATGG+AGG | + | chr2_1:10337111-10337130 | None:intergenic | 30.0% | |
| CTCTGTAAAAACTTGTGTTA+TGG | + | chr2_1:10337114-10337133 | None:intergenic | 30.0% | |
| ! | CATTCAAAAAGTGCATGAAA+CGG | + | chr2_1:10337236-10337255 | None:intergenic | 30.0% |
| CATTATACAAATGTTGTGGA+CGG | + | chr2_1:10337329-10337348 | None:intergenic | 30.0% | |
| CATGCATTATACAAATGTTG+TGG | + | chr2_1:10337333-10337352 | None:intergenic | 30.0% | |
| ! | GACAGTCTTTGTATGATTTT+GGG | - | chr2_1:10337437-10337456 | Msa0194380:CDS | 30.0% |
| ! | ACAGTCTTTGTATGATTTTG+GGG | - | chr2_1:10337438-10337457 | Msa0194380:CDS | 30.0% |
| TGTTGACAAAACTTTCTCTT+AGG | - | chr2_1:10337810-10337829 | Msa0194380:intron | 30.0% | |
| !! | GCAAGTTGTTTTATATCCAT+TGG | + | chr2_1:10338109-10338128 | None:intergenic | 30.0% |
| !! | TGAGATAAAAGTGGATTGAG+AGG | - | chr2_1:10335381-10335400 | Msa0194380:CDS | 35.0% |
| !! | AAAAGTGGATTGAGAGGATT+TGG | - | chr2_1:10335387-10335406 | Msa0194380:CDS | 35.0% |
| ! | AGCTAACATTTTACCGTTGT+AGG | - | chr2_1:10335474-10335493 | Msa0194380:CDS | 35.0% |
| CACTAATGTTTGCATATGGT+GGG | + | chr2_1:10335527-10335546 | None:intergenic | 35.0% | |
| TCACTAATGTTTGCATATGG+TGG | + | chr2_1:10335528-10335547 | None:intergenic | 35.0% | |
| GAGTCACTAATGTTTGCATA+TGG | + | chr2_1:10335531-10335550 | None:intergenic | 35.0% | |
| ACACAATACCATATGTTTGG+CGG | + | chr2_1:10335613-10335632 | None:intergenic | 35.0% | |
| CACACACAATACCATATGTT+TGG | + | chr2_1:10335616-10335635 | None:intergenic | 35.0% | |
| !! | AGAATGGTTTTACGGTGTTA+GGG | + | chr2_1:10335762-10335781 | None:intergenic | 35.0% |
| !! | AAGAATGGTTTTACGGTGTT+AGG | + | chr2_1:10335763-10335782 | None:intergenic | 35.0% |
| !! | CTTGAGGAAGAATGGTTTTA+CGG | + | chr2_1:10335770-10335789 | None:intergenic | 35.0% |
| ! | TGTTATAGATGCGACTTGTT+GGG | + | chr2_1:10336073-10336092 | None:intergenic | 35.0% |
| AAGAACTTCAGCATATTGCT+CGG | + | chr2_1:10336096-10336115 | None:intergenic | 35.0% | |
| ! | AACTTCCGCTACCAATTTTA+TGG | - | chr2_1:10336334-10336353 | Msa0194380:intron | 35.0% |
| GATAAGCCTCAAGGTTTAAA+GGG | + | chr2_1:10336386-10336405 | None:intergenic | 35.0% | |
| AATATAGTACCTAACAGAGG+TGG | - | chr2_1:10336512-10336531 | Msa0194380:intron | 35.0% | |
| !!! | ATGTTCATGGTTTTGTGGTA+TGG | - | chr2_1:10336923-10336942 | Msa0194380:intron | 35.0% |
| CATGAATGCTTCTTCAATGT+CGG | + | chr2_1:10337284-10337303 | None:intergenic | 35.0% | |
| ! | GGACAGTCTTTGTATGATTT+TGG | - | chr2_1:10337436-10337455 | Msa0194380:CDS | 35.0% |
| TCTCAAACTTAGATCTCTAG+TGG | - | chr2_1:10337579-10337598 | Msa0194380:CDS | 35.0% | |
| ATCTTTGTAAACAGTACTGC+TGG | - | chr2_1:10337637-10337656 | Msa0194380:intron | 35.0% | |
| AAACTTTCTCTTAGGATCGA+AGG | - | chr2_1:10337818-10337837 | Msa0194380:intron | 35.0% | |
| AACTTTCTCTTAGGATCGAA+GGG | - | chr2_1:10337819-10337838 | Msa0194380:intron | 35.0% | |
| AAAACATTTCTATTGGGGCA+TGG | + | chr2_1:10337992-10338011 | None:intergenic | 35.0% | |
| TCCAAGCATTTCACCTACAA+CGG | + | chr2_1:10335490-10335509 | None:intergenic | 40.0% | |
| ATAGAATGGGGTGAGAAAGA+TGG | + | chr2_1:10335705-10335724 | None:intergenic | 40.0% | |
| AAACCATTCTTCCTCAAGCA+CGG | - | chr2_1:10335772-10335791 | Msa0194380:intron | 40.0% | |
| !! | CGACTTGTTGGGTAAAATTG+GGG | + | chr2_1:10336062-10336081 | None:intergenic | 40.0% |
| !! | GCGACTTGTTGGGTAAAATT+GGG | + | chr2_1:10336063-10336082 | None:intergenic | 40.0% |
| !! | TGCGACTTGTTGGGTAAAAT+TGG | + | chr2_1:10336064-10336083 | None:intergenic | 40.0% |
| GTGTTATAGATGCGACTTGT+TGG | + | chr2_1:10336074-10336093 | None:intergenic | 40.0% | |
| ! | TTGATTCGCTCTTAATACCG+TGG | - | chr2_1:10336307-10336326 | Msa0194380:intron | 40.0% |
| TGATTCGCTCTTAATACCGT+GGG | - | chr2_1:10336308-10336327 | Msa0194380:intron | 40.0% | |
| TAACCACCCTTTAAACCTTG+AGG | - | chr2_1:10336377-10336396 | Msa0194380:intron | 40.0% | |
| GGATAAGCCTCAAGGTTTAA+AGG | + | chr2_1:10336387-10336406 | None:intergenic | 40.0% | |
| TGATATTGTCCACCTCTGTT+AGG | + | chr2_1:10336524-10336543 | None:intergenic | 40.0% | |
| ACAGAGGTGGACAATATCAT+TGG | - | chr2_1:10336525-10336544 | Msa0194380:intron | 40.0% | |
| CAGAGGTGGACAATATCATT+GGG | - | chr2_1:10336526-10336545 | Msa0194380:intron | 40.0% | |
| AGAGGTGGACAATATCATTG+GGG | - | chr2_1:10336527-10336546 | Msa0194380:intron | 40.0% | |
| TGGAGTCTACTAGACAAAGT+CGG | - | chr2_1:10336550-10336569 | Msa0194380:intron | 40.0% | |
| GGATAAGTGTGACATCATCA+TGG | - | chr2_1:10336829-10336848 | Msa0194380:intron | 40.0% | |
| CAAAATATACCCCGGTTTCT+CGG | - | chr2_1:10337196-10337215 | Msa0194380:intron | 40.0% | |
| CGGTCAAACAGTCAAAAATG+TGG | + | chr2_1:10337264-10337283 | None:intergenic | 40.0% | |
| AAACTCGTGCATGTTGGAAT+TGG | - | chr2_1:10337466-10337485 | Msa0194380:CDS | 40.0% | |
| !! | CATGTTGGAATTGGCCTTAT+AGG | - | chr2_1:10337475-10337494 | Msa0194380:CDS | 40.0% |
| AATGTGGAGTGCAACCTATA+AGG | + | chr2_1:10337492-10337511 | None:intergenic | 40.0% | |
| CACATTCAATTGCTACTCGA+GGG | - | chr2_1:10337506-10337525 | Msa0194380:CDS | 40.0% | |
| CTTACCAAGTGATTCGTCTA+TGG | + | chr2_1:10337665-10337684 | None:intergenic | 40.0% | |
| AGAAAGTTCACAGCTGATGT+GGG | + | chr2_1:10338037-10338056 | None:intergenic | 40.0% | |
| ACCGTTGTAGGTGAAATGCT+TGG | - | chr2_1:10335486-10335505 | Msa0194380:CDS | 45.0% | |
| CGTGGTGTAAACTATGCATC+TGG | - | chr2_1:10335564-10335583 | Msa0194380:intron | 45.0% | |
| AACTATGCATCTGGTGCATC+TGG | - | chr2_1:10335573-10335592 | Msa0194380:intron | 45.0% | |
| AACCATTCTTCCTCAAGCAC+GGG | - | chr2_1:10335773-10335792 | Msa0194380:intron | 45.0% | |
| TATAAAGTTGCCCGTGCTTG+AGG | + | chr2_1:10335786-10335805 | None:intergenic | 45.0% | |
| AAGCCTCAAGGTTTAAAGGG+TGG | + | chr2_1:10336383-10336402 | None:intergenic | 45.0% | |
| TCAGATCAGGATAAGCCTCA+AGG | + | chr2_1:10336395-10336414 | None:intergenic | 45.0% | |
| ATCCTGATCTGATGAGCCTT+CGG | - | chr2_1:10336403-10336422 | Msa0194380:intron | 45.0% | |
| TTATGCGAGTTAGACTCCGA+AGG | + | chr2_1:10336422-10336441 | None:intergenic | 45.0% | |
| TGTGGACGGTTTCTTGTTGA+AGG | + | chr2_1:10337315-10337334 | None:intergenic | 45.0% | |
| GCAAGAAAACTCGTGCATGT+TGG | - | chr2_1:10337460-10337479 | Msa0194380:CDS | 45.0% | |
| CCTCGAGTAGCAATTGAATG+TGG | + | chr2_1:10337508-10337527 | None:intergenic | 45.0% | |
| CCACATTCAATTGCTACTCG+AGG | - | chr2_1:10337505-10337524 | Msa0194380:CDS | 45.0% | |
| GGTTCCATAGACGAATCACT+TGG | - | chr2_1:10337658-10337677 | Msa0194380:intron | 45.0% | |
| GAGAAAGTTCACAGCTGATG+TGG | + | chr2_1:10338038-10338057 | None:intergenic | 45.0% | |
| TCCAATGACGACCTATCCAA+TGG | - | chr2_1:10338090-10338109 | Msa0194380:intron | 45.0% | |
| TCCATTGGATAGGTCGTCAT+TGG | + | chr2_1:10338094-10338113 | None:intergenic | 45.0% | |
| !!! | AATATATATAATATTTTTGA+GGG | + | chr2_1:10335820-10335839 | None:intergenic | 5.0% |
| !!! | TTTCTTTAAAAAAAAAAAAT+TGG | - | chr2_1:10336808-10336827 | Msa0194380:intron | 5.0% |
| !!! | AATATAATTTTTTTTTTTGA+GGG | + | chr2_1:10336994-10337013 | None:intergenic | 5.0% |
| !!! | AAATATAATTTTTTTTTTTG+AGG | + | chr2_1:10336995-10337014 | None:intergenic | 5.0% |
| !! | GGTTTTACGGTGTTAGGGAG+AGG | + | chr2_1:10335757-10335776 | None:intergenic | 50.0% |
| !! | CAGGGTGCTAATGTCGCTTT+GGG | - | chr2_1:10335894-10335913 | Msa0194380:intron | 50.0% |
| GGTGGACAATATCATTGGGG+TGG | - | chr2_1:10336530-10336549 | Msa0194380:intron | 50.0% | |
| AACCTTGCTGACCGAGAAAC+CGG | + | chr2_1:10337210-10337229 | None:intergenic | 50.0% | |
| ATTGCTACTCGAGGGACAGA+TGG | - | chr2_1:10337514-10337533 | Msa0194380:CDS | 50.0% | |
| TCTGACCTCACTGGACAACA+AGG | + | chr2_1:10337944-10337963 | None:intergenic | 50.0% | |
| TGTTGTCCAGTGAGGTCAGA+TGG | - | chr2_1:10337944-10337963 | Msa0194380:intron | 50.0% | |
| GTTGTCCAGTGAGGTCAGAT+GGG | - | chr2_1:10337945-10337964 | Msa0194380:intron | 50.0% | |
| TTGGGGCATGGAGTTGAATC+AGG | + | chr2_1:10337980-10337999 | None:intergenic | 50.0% | |
| GACTCGGACGACATACTTCG+TGG | - | chr2_1:10335546-10335565 | Msa0194380:CDS | 55.0% | |
| ! | TGGTGCATCTGGAATCCGCT+CGG | - | chr2_1:10335584-10335603 | Msa0194380:intron | 55.0% |
| TATGTTTGGCGGTCTCCGAG+CGG | + | chr2_1:10335602-10335621 | None:intergenic | 55.0% | |
| CTCGGAGACCGCCAAACATA+TGG | - | chr2_1:10335602-10335621 | Msa0194380:intron | 55.0% | |
| TGCCCGTGCTTGAGGAAGAA+TGG | + | chr2_1:10335778-10335797 | None:intergenic | 55.0% | |
| ! | GCAGGGTGCTAATGTCGCTT+TGG | - | chr2_1:10335893-10335912 | Msa0194380:intron | 55.0% |
| !! | GGTAGCGGAAGTTGAACCCA+CGG | + | chr2_1:10336327-10336346 | None:intergenic | 55.0% |
| CTCCGAAGGCTCATCAGATC+AGG | + | chr2_1:10336408-10336427 | None:intergenic | 55.0% | |
| ACCTTGCTGACCGAGAAACC+GGG | + | chr2_1:10337209-10337228 | None:intergenic | 55.0% | |
| GGTTTCTCGGTCAGCAAGGT+TGG | - | chr2_1:10337209-10337228 | Msa0194380:intron | 55.0% | |
| ! | GTGCTCCTTGTTGTCCAGTG+AGG | - | chr2_1:10337936-10337955 | Msa0194380:intron | 55.0% |
| CACATCCCATCTGACCTCAC+TGG | + | chr2_1:10337953-10337972 | None:intergenic | 55.0% | |
| CCTTGCTGACCGAGAAACCG+GGG | + | chr2_1:10337208-10337227 | None:intergenic | 60.0% | |
| CCCCGGTTTCTCGGTCAGCA+AGG | - | chr2_1:10337205-10337224 | Msa0194380:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 10335353 | 10338147 | 10335353 | ID=Msa0194380;Name=Msa0194380 |
| chr2_1 | mRNA | 10335353 | 10338147 | 10335353 | ID=Msa0194380-mRNA-1;Parent=Msa0194380;Name=Msa0194380-mRNA-1;_AED=0.47;_eAED=0.47;_QI=0|0|0|0.75|0.33|0.5|4|0|205 |
| chr2_1 | exon | 10338139 | 10338147 | 10338139 | ID=Msa0194380-mRNA-1:exon:4692;Parent=Msa0194380-mRNA-1 |
| chr2_1 | exon | 10337358 | 10337603 | 10337358 | ID=Msa0194380-mRNA-1:exon:4691;Parent=Msa0194380-mRNA-1 |
| chr2_1 | exon | 10335923 | 10336058 | 10335923 | ID=Msa0194380-mRNA-1:exon:4690;Parent=Msa0194380-mRNA-1 |
| chr2_1 | exon | 10335353 | 10335579 | 10335353 | ID=Msa0194380-mRNA-1:exon:4689;Parent=Msa0194380-mRNA-1 |
| chr2_1 | CDS | 10338139 | 10338147 | 10338139 | ID=Msa0194380-mRNA-1:cds;Parent=Msa0194380-mRNA-1 |
| chr2_1 | CDS | 10337358 | 10337603 | 10337358 | ID=Msa0194380-mRNA-1:cds;Parent=Msa0194380-mRNA-1 |
| chr2_1 | CDS | 10335923 | 10336058 | 10335923 | ID=Msa0194380-mRNA-1:cds;Parent=Msa0194380-mRNA-1 |
| chr2_1 | CDS | 10335353 | 10335579 | 10335353 | ID=Msa0194380-mRNA-1:cds;Parent=Msa0194380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
