Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303280 | KEH22941.1 | 97.727 | 44 | 1 | 0 | 1 | 44 | 28 | 71 | 6.06e-21 | 90.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303280 | A0A072U0M3 | 97.727 | 44 | 1 | 0 | 1 | 44 | 28 | 71 | 2.90e-21 | 90.5 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011930 | Msa1303280 | 0.806501 | 7.979191e-50 | -8.615850e-47 |
| Msa0207350 | Msa1303280 | 0.855457 | 6.228726e-62 | -8.615850e-47 |
| Msa1303270 | Msa1303280 | 0.947854 | 2.984581e-106 | -8.615850e-47 |
| Msa1303280 | Msa1390700 | 0.815235 | 1.025956e-51 | -8.615850e-47 |
| Msa1303280 | Msa1392910 | 0.805157 | 1.528599e-49 | -8.615850e-47 |
| Msa1303280 | Msa1418240 | 0.818511 | 1.887104e-52 | -8.615850e-47 |
| Msa0432160 | Msa1303280 | 0.802786 | 4.755617e-49 | -8.615850e-47 |
| Msa0467100 | Msa1303280 | 0.845004 | 5.320465e-59 | -8.615850e-47 |
| Msa0468410 | Msa1303280 | 0.805581 | 1.245771e-49 | -8.615850e-47 |
| Msa0476680 | Msa1303280 | 0.800409 | 1.460631e-48 | -8.615850e-47 |
| Msa1006010 | Msa1303280 | -0.805650 | 1.204855e-49 | -8.615850e-47 |
| Msa1039390 | Msa1303280 | 0.803559 | 3.290827e-49 | -8.615850e-47 |
| Msa0259210 | Msa1303280 | 0.810515 | 1.109587e-50 | -8.615850e-47 |
| Msa0336310 | Msa1303280 | 0.805698 | 1.177508e-49 | -8.615850e-47 |
| Msa0336320 | Msa1303280 | 0.804914 | 1.718109e-49 | -8.615850e-47 |
| Msa1144880 | Msa1303280 | 0.809022 | 2.323543e-50 | -8.615850e-47 |
| Msa0485240 | Msa1303280 | 0.811644 | 6.314606e-51 | -8.615850e-47 |
| Msa0871720 | Msa1303280 | 0.815564 | 8.667898e-52 | -8.615850e-47 |
| Msa0903710 | Msa1303280 | 0.805968 | 1.032948e-49 | -8.615850e-47 |
| Msa0928490 | Msa1303280 | 0.812057 | 5.135018e-51 | -8.615850e-47 |
| Msa0936380 | Msa1303280 | 0.802080 | 6.648949e-49 | -8.615850e-47 |
| Msa0937020 | Msa1303280 | 0.801944 | 7.088619e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 10 sgRNAs with CRISPR-Local
Find 445 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAGGCCCTTAACATTTC+TGG | 0.105015 | 8_3:+66348506 | Msa1303280:CDS |
| TCTTAAGTGCTTCATTTATA+TGG | 0.216688 | 8_3:-66341961 | None:intergenic |
| TGCCATAAAAGAAGGAAATA+AGG | 0.335057 | 8_3:+66341895 | Msa1303280:CDS |
| AGTTGTTTCCAGAAATGTTA+AGG | 0.345031 | 8_3:-66348514 | None:intergenic |
| GTTGTTTCCAGAAATGTTAA+GGG | 0.399743 | 8_3:-66348513 | None:intergenic |
| TACTTAGCTGCTGAAGGAAA+TGG | 0.418999 | 8_3:+66341869 | Msa1303280:CDS |
| TCTCTCAAAACTTCACTTTG+AGG | 0.457299 | 8_3:+66348490 | Msa1303280:CDS |
| AATGGAGATGCCATAAAAGA+AGG | 0.547076 | 8_3:+66341887 | Msa1303280:CDS |
| GAAATGTACTTAGCTGCTGA+AGG | 0.580070 | 8_3:+66341863 | None:intergenic |
| CTTCATTTATATGGTGACGA+AGG | 0.627090 | 8_3:-66341952 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTAAAATTAGATTATAT+GGG | - | chr8_3:66347489-66347508 | None:intergenic | 10.0% |
| !! | AAAAGTAAAATTAGATTATA+TGG | - | chr8_3:66347490-66347509 | None:intergenic | 10.0% |
| !! | AAAGTAAAATTAGATTATAT+GGG | - | chr8_3:66347489-66347508 | None:intergenic | 10.0% |
| !! | AAAAGTAAAATTAGATTATA+TGG | - | chr8_3:66347490-66347509 | None:intergenic | 10.0% |
| !! | AAAGTAAAATTAGATTATAT+GGG | - | chr8_3:66347489-66347508 | None:intergenic | 10.0% |
| !! | AAAAGTAAAATTAGATTATA+TGG | - | chr8_3:66347490-66347509 | None:intergenic | 10.0% |
| !! | AAAGTAAAATTATATTAGAT+GGG | - | chr8_3:66347630-66347649 | None:intergenic | 10.0% |
| !! | TTAAATATAAAAATTAGATG+GGG | - | chr8_3:66347675-66347694 | None:intergenic | 10.0% |
| !! | CATTAAATATAAAAATTAGA+TGG | - | chr8_3:66347677-66347696 | None:intergenic | 10.0% |
| !!! | CATCTAATTTTTATATTTAA+TGG | + | chr8_3:66347675-66347694 | Msa1303280:intron | 10.0% |
| !! | TATTAAATATCATCTAAATT+AGG | - | chr8_3:66347822-66347841 | None:intergenic | 10.0% |
| !! | TAATAAATTTCTATTAGACT+TGG | - | chr8_3:66342170-66342189 | None:intergenic | 15.0% |
| !! | GTGTTATAAATATATTATAG+TGG | + | chr8_3:66343290-66343309 | Msa1303280:intron | 15.0% |
| !! | TTATAAATATATTATAGTGG+AGG | + | chr8_3:66343293-66343312 | Msa1303280:intron | 15.0% |
| !!! | ATCAATATTTTATAAGTTTC+AGG | + | chr8_3:66343937-66343956 | Msa1303280:intron | 15.0% |
| !!! | TATTGTTTTTATTATTATGG+AGG | + | chr8_3:66347454-66347473 | Msa1303280:intron | 15.0% |
| !! | AAGTAAAATTAGATTATATG+GGG | - | chr8_3:66347488-66347507 | None:intergenic | 15.0% |
| !!! | AATTTTACTTTTATGCTTTA+TGG | + | chr8_3:66347498-66347517 | Msa1303280:intron | 15.0% |
| !! | AAGTAAAATTAGATTATATG+GGG | - | chr8_3:66347488-66347507 | None:intergenic | 15.0% |
| !!! | AATTTTACTTTTATGCTTTA+TGG | + | chr8_3:66347498-66347517 | Msa1303280:intron | 15.0% |
| !! | AAGTAAAATTAGATTATATG+GGG | - | chr8_3:66347488-66347507 | None:intergenic | 15.0% |
| !!! | AATTTTACTTTTATGCTTTA+TGG | + | chr8_3:66347498-66347517 | Msa1303280:intron | 15.0% |
| !! | AAGTAAAATTATATTAGATG+GGG | - | chr8_3:66347629-66347648 | None:intergenic | 15.0% |
| !! | GAAAGTAAAATTATATTAGA+TGG | - | chr8_3:66347631-66347650 | None:intergenic | 15.0% |
| !!! | AATTTTACTTTCATGTTTAA+TGG | + | chr8_3:66347639-66347658 | Msa1303280:intron | 15.0% |
| !! | CGCATTATCAATATATAATT+GGG | - | chr8_3:66342137-66342156 | None:intergenic | 20.0% |
| !! | ACGCATTATCAATATATAAT+TGG | - | chr8_3:66342138-66342157 | None:intergenic | 20.0% |
| !!! | TAACCAATTAATTCTAGTTT+GGG | - | chr8_3:66342571-66342590 | None:intergenic | 20.0% |
| !!! | ATAACCAATTAATTCTAGTT+TGG | - | chr8_3:66342572-66342591 | None:intergenic | 20.0% |
| !!! | ATTTTAGTAAGGTTTTAATG+AGG | + | chr8_3:66343239-66343258 | Msa1303280:intron | 20.0% |
| !! | ATATGTGATAAGTAATAATG+AGG | - | chr8_3:66343821-66343840 | None:intergenic | 20.0% |
| !! | AATCAAATTTCCCAATATTA+GGG | + | chr8_3:66344651-66344670 | Msa1303280:intron | 20.0% |
| !!! | CTTAATAAGAGAAAAGTTTT+TGG | + | chr8_3:66345298-66345317 | Msa1303280:intron | 20.0% |
| !!! | GAGAGACTTATATAATTTTA+TGG | - | chr8_3:66345671-66345690 | None:intergenic | 20.0% |
| !! | AAATTATATAAGTCTCTCTA+TGG | + | chr8_3:66345673-66345692 | Msa1303280:intron | 20.0% |
| !! | AATTATATAAGTCTCTCTAT+GGG | + | chr8_3:66345674-66345693 | Msa1303280:intron | 20.0% |
| !!! | GATCTTTTCATAAAAATACA+TGG | - | chr8_3:66345781-66345800 | None:intergenic | 20.0% |
| !!! | TGTATTTTTATGAAAAGATC+TGG | + | chr8_3:66345781-66345800 | Msa1303280:intron | 20.0% |
| !!! | TAACCAATTAATTCTAGTTT+GGG | - | chr8_3:66342571-66342590 | None:intergenic | 20.0% |
| !!! | ATAACCAATTAATTCTAGTT+TGG | - | chr8_3:66342572-66342591 | None:intergenic | 20.0% |
| !!! | ATTTTAGTAAGGTTTTAATG+AGG | + | chr8_3:66343239-66343258 | Msa1303280:intron | 20.0% |
| !! | GTTATAAATATATTAGTGAG+TGG | + | chr8_3:66347043-66347062 | Msa1303280:intron | 20.0% |
| !! | GAAAATATAAAATTGGTTGT+GGG | - | chr8_3:66347073-66347092 | None:intergenic | 20.0% |
| !! | ATATATATAGGCAAATGAAA+TGG | - | chr8_3:66347145-66347164 | None:intergenic | 20.0% |
| !! | ATTTGCCTATATATATATGA+AGG | + | chr8_3:66347149-66347168 | Msa1303280:intron | 20.0% |
| !! | TTTGCCTATATATATATGAA+GGG | + | chr8_3:66347150-66347169 | Msa1303280:intron | 20.0% |
| !! | AATATTATTATTATTTGCCC+CGG | + | chr8_3:66347381-66347400 | Msa1303280:intron | 20.0% |
| !! | ATGAATCAATATTATGAATG+GGG | - | chr8_3:66347711-66347730 | None:intergenic | 20.0% |
| !! | CATGAATCAATATTATGAAT+GGG | - | chr8_3:66347712-66347731 | None:intergenic | 20.0% |
| !! | TCATGAATCAATATTATGAA+TGG | - | chr8_3:66347713-66347732 | None:intergenic | 20.0% |
| !!! | TTAATGAACAGTGTTTTTAA+CGG | + | chr8_3:66347870-66347889 | Msa1303280:intron | 20.0% |
| !!! | GTCATAAACAGTATTTTAAA+CGG | + | chr8_3:66347958-66347977 | Msa1303280:intron | 20.0% |
| !! | AAAAATTATGAATGAAGATG+AGG | - | chr8_3:66348047-66348066 | None:intergenic | 20.0% |
| !!! | TTTTACACATACTTACAAAA+TGG | + | chr8_3:66348080-66348099 | Msa1303280:intron | 20.0% |
| !!! | ATCGTTGCTATTAAATAAAA+TGG | + | chr8_3:66348301-66348320 | Msa1303280:intron | 20.0% |
| !!! | AAATTTTTCTTTGATAAGCA+TGG | + | chr8_3:66348421-66348440 | Msa1303280:intron | 20.0% |
| ! | TCTTAAGTGCTTCATTTATA+TGG | - | chr8_3:66341964-66341983 | None:intergenic | 25.0% |
| ! | AGAGCTATTATCTCATTATA+TGG | + | chr8_3:66342106-66342125 | Msa1303280:intron | 25.0% |
| ! | TAAATTTCTATTAGACTTGG+AGG | - | chr8_3:66342167-66342186 | None:intergenic | 25.0% |
| ! | TTGACAGAAAATGATATATC+AGG | - | chr8_3:66342436-66342455 | None:intergenic | 25.0% |
| ! | TCAACATATACAAAGAATTG+TGG | + | chr8_3:66342780-66342799 | Msa1303280:intron | 25.0% |
| ! | TTGAAAGAAGGATACATAAA+AGG | + | chr8_3:66342867-66342886 | Msa1303280:intron | 25.0% |
| !! | TCATGAGTGAAAAAGAATTT+TGG | - | chr8_3:66342915-66342934 | None:intergenic | 25.0% |
| ! | GTTTCTCAAAAACTTTACTT+GGG | - | chr8_3:66343016-66343035 | None:intergenic | 25.0% |
| ! | AGTTTCTCAAAAACTTTACT+TGG | - | chr8_3:66343017-66343036 | None:intergenic | 25.0% |
| ! | GAGAAACTTGTACTAAAAAT+TGG | + | chr8_3:66343029-66343048 | Msa1303280:intron | 25.0% |
| ! | TTACTAAAATAAAACCCTGT+GGG | - | chr8_3:66343229-66343248 | None:intergenic | 25.0% |
| !! | TAAATATATTATAGTGGAGG+TGG | + | chr8_3:66343296-66343315 | Msa1303280:intron | 25.0% |
| ! | TGCATGTAAACAATATTAGT+GGG | - | chr8_3:66343348-66343367 | None:intergenic | 25.0% |
| ! | TGTGTCACAATATATTTGTA+TGG | - | chr8_3:66343455-66343474 | None:intergenic | 25.0% |
| ! | GACACATCTTTCATATAATT+TGG | + | chr8_3:66343469-66343488 | Msa1303280:intron | 25.0% |
| ! | AAAATTCTTGAATTCACTTC+AGG | + | chr8_3:66343528-66343547 | Msa1303280:intron | 25.0% |
| ! | ACCAAAAACTAATTTCAAAG+GGG | - | chr8_3:66344432-66344451 | None:intergenic | 25.0% |
| ! | GACCAAAAACTAATTTCAAA+GGG | - | chr8_3:66344433-66344452 | None:intergenic | 25.0% |
| ! | TGACCAAAAACTAATTTCAA+AGG | - | chr8_3:66344434-66344453 | None:intergenic | 25.0% |
| ! | ATTCTTAGATGGGAAATATT+TGG | - | chr8_3:66344461-66344480 | None:intergenic | 25.0% |
| !! | ATTTCCCATCTAAGAATTTT+TGG | + | chr8_3:66344464-66344483 | Msa1303280:intron | 25.0% |
| ! | ACATCCAAAAATTCTTAGAT+GGG | - | chr8_3:66344471-66344490 | None:intergenic | 25.0% |
| ! | GAATCAAATTTCCCAATATT+AGG | + | chr8_3:66344650-66344669 | Msa1303280:intron | 25.0% |
| ! | ATCAAATTTCCCAATATTAG+GGG | + | chr8_3:66344652-66344671 | Msa1303280:intron | 25.0% |
| ! | TGTATTTCAGATATCTGATT+AGG | - | chr8_3:66345070-66345089 | None:intergenic | 25.0% |
| ! | TCAATAAATTATGTCACCAA+TGG | + | chr8_3:66345106-66345125 | Msa1303280:intron | 25.0% |
| ! | AATGTAGACAAGGAAAAAAT+TGG | + | chr8_3:66345236-66345255 | Msa1303280:intron | 25.0% |
| !!! | TAATTGATGCAACTACTTTT+AGG | + | chr8_3:66345485-66345504 | Msa1303280:intron | 25.0% |
| ! | CATAAAAATACATGGACAAA+TGG | - | chr8_3:66345773-66345792 | None:intergenic | 25.0% |
| !!! | GTTGATGACATAAACATTAT+CGG | + | chr8_3:66345832-66345851 | Msa1303280:intron | 25.0% |
| !! | TTTAAACAATCTATGGCTTT+TGG | - | chr8_3:66345874-66345893 | None:intergenic | 25.0% |
| ! | CTCTTTCTTTAAACAATCTA+TGG | - | chr8_3:66345881-66345900 | None:intergenic | 25.0% |
| ! | TTACAAATTGAGTACCTAAA+TGG | + | chr8_3:66345943-66345962 | Msa1303280:intron | 25.0% |
| ! | TTGACAGAAAATGATATATC+AGG | - | chr8_3:66342436-66342455 | None:intergenic | 25.0% |
| ! | CAACATATACAAAAGAATTG+TGG | + | chr8_3:66346531-66346550 | Msa1303280:intron | 25.0% |
| ! | TTGAAAGAAGGATACATAAA+AGG | + | chr8_3:66342867-66342886 | Msa1303280:intron | 25.0% |
| !! | TCATGAGTGAAAAAGAATTT+TGG | - | chr8_3:66342915-66342934 | None:intergenic | 25.0% |
| ! | GTTTCTCAAAAACTTTACTT+GGG | - | chr8_3:66343016-66343035 | None:intergenic | 25.0% |
| ! | AGTTTCTCAAAAACTTTACT+TGG | - | chr8_3:66343017-66343036 | None:intergenic | 25.0% |
| ! | GAGAAACTTGTACTAAAAAT+TGG | + | chr8_3:66343029-66343048 | Msa1303280:intron | 25.0% |
| ! | TTACTAAAATAAAACCCTGT+GGG | - | chr8_3:66343229-66343248 | None:intergenic | 25.0% |
| ! | GGAAAATATAAAATTGGTTG+TGG | - | chr8_3:66347074-66347093 | None:intergenic | 25.0% |
| ! | TTGGTGGGAAAATATAAAAT+TGG | - | chr8_3:66347080-66347099 | None:intergenic | 25.0% |
| ! | TTAGTTATAAATCACTTGAC+AGG | - | chr8_3:66347424-66347443 | None:intergenic | 25.0% |
| ! | AAGTGATTTATAACTAAGAG+TGG | + | chr8_3:66347427-66347446 | Msa1303280:intron | 25.0% |
| !!! | TTTACTTTTATGCTTTATGG+AGG | + | chr8_3:66347501-66347520 | Msa1303280:intron | 25.0% |
| !!! | TTTACTTTTATGCTTTATGG+AGG | + | chr8_3:66347501-66347520 | Msa1303280:intron | 25.0% |
| !!! | TTTACTTTTATGCTTTATGG+AGG | + | chr8_3:66347501-66347520 | Msa1303280:intron | 25.0% |
| ! | TTTACTTTCATGTTTAATGG+AGG | + | chr8_3:66347642-66347661 | Msa1303280:intron | 25.0% |
| !! | GTTTTTAACGGTAACAATAA+CGG | + | chr8_3:66347992-66348011 | Msa1303280:intron | 25.0% |
| !! | ATGAAGATGAGGTATTTATA+AGG | - | chr8_3:66348036-66348055 | None:intergenic | 25.0% |
| ! | ATAGAGATATGCATATGAAA+AGG | - | chr8_3:66348113-66348132 | None:intergenic | 25.0% |
| !! | TTCTCCTATTTCTTCAATAA+GGG | - | chr8_3:66348166-66348185 | None:intergenic | 25.0% |
| !!! | GTAATTACTTTTTGTTTTCG+TGG | + | chr8_3:66348240-66348259 | Msa1303280:intron | 25.0% |
| TGCCATAAAAGAAGGAAATA+AGG | + | chr8_3:66341895-66341914 | Msa1303280:CDS | 30.0% | |
| !!! | TGCCTTATTTCCTTCTTTTA+TGG | - | chr8_3:66341900-66341919 | None:intergenic | 30.0% |
| GCCAATGTTAATACAATATC+TGG | + | chr8_3:66342055-66342074 | Msa1303280:intron | 30.0% | |
| GCCAGATATTGTATTAACAT+TGG | - | chr8_3:66342059-66342078 | None:intergenic | 30.0% | |
| TAATGAGATAATAGCTCTTC+CGG | - | chr8_3:66342104-66342123 | None:intergenic | 30.0% | |
| GCTATTATCTCATTATATGG+AGG | + | chr8_3:66342109-66342128 | Msa1303280:intron | 30.0% | |
| TTCAGAGATATTCGTCTAAA+TGG | + | chr8_3:66342193-66342212 | Msa1303280:intron | 30.0% | |
| !! | AGTGTTAAAGCGTTTTTACA+TGG | + | chr8_3:66342252-66342271 | Msa1303280:intron | 30.0% |
| ! | ATTTCTTCACCTTTTTCTTG+AGG | - | chr8_3:66342346-66342365 | None:intergenic | 30.0% |
| GAAAAAGGTGAAGAAATACT+TGG | + | chr8_3:66342349-66342368 | Msa1303280:intron | 30.0% | |
| !! | TATTGTTGCATCCATTTTTC+CGG | - | chr8_3:66342814-66342833 | None:intergenic | 30.0% |
| !! | TTGGAGAAATGTGTTTTGTT+CGG | - | chr8_3:66342896-66342915 | None:intergenic | 30.0% |
| AAGAGATATTTGTCTTCATG+AGG | + | chr8_3:66343064-66343083 | Msa1303280:intron | 30.0% | |
| AGAGATATTTGTCTTCATGA+GGG | + | chr8_3:66343065-66343084 | Msa1303280:intron | 30.0% | |
| GGGAAAAAAAATTCTAGTGA+AGG | - | chr8_3:66343209-66343228 | None:intergenic | 30.0% | |
| !!! | ACTAGAATTTTTTTTCCCAC+AGG | + | chr8_3:66343211-66343230 | Msa1303280:intron | 30.0% |
| !!! | CTAGAATTTTTTTTCCCACA+GGG | + | chr8_3:66343212-66343231 | Msa1303280:intron | 30.0% |
| CTTACTAAAATAAAACCCTG+TGG | - | chr8_3:66343230-66343249 | None:intergenic | 30.0% | |
| !!! | CACAGGGTTTTATTTTAGTA+AGG | + | chr8_3:66343228-66343247 | Msa1303280:intron | 30.0% |
| ATGTAAACAATATTAGTGGG+AGG | - | chr8_3:66343345-66343364 | None:intergenic | 30.0% | |
| GTGCATGTAAACAATATTAG+TGG | - | chr8_3:66343349-66343368 | None:intergenic | 30.0% | |
| AATATTGTTTACATGCACGT+AGG | + | chr8_3:66343351-66343370 | Msa1303280:intron | 30.0% | |
| TAAGTTCAGTAGCAAATGAA+AGG | - | chr8_3:66343495-66343514 | None:intergenic | 30.0% | |
| TATGTTCACATGAAGAGAAT+TGG | - | chr8_3:66343607-66343626 | None:intergenic | 30.0% | |
| TCGCGAAAAGAGAATTAAAA+TGG | - | chr8_3:66343655-66343674 | None:intergenic | 30.0% | |
| ! | GCTTTGTAAAGCTGAATTTT+TGG | - | chr8_3:66343733-66343752 | None:intergenic | 30.0% |
| AAGAAAGAGAAAGATCTCAA+TGG | - | chr8_3:66343903-66343922 | None:intergenic | 30.0% | |
| TAATTGATGCATCAACTAGA+TGG | + | chr8_3:66344048-66344067 | Msa1303280:intron | 30.0% | |
| ! | TTTTCTTGACAGGATAATCA+GGG | - | chr8_3:66344154-66344173 | None:intergenic | 30.0% |
| ! | ATTTTCTTGACAGGATAATC+AGG | - | chr8_3:66344155-66344174 | None:intergenic | 30.0% |
| AATGAATATTGCATGTCCAT+TGG | + | chr8_3:66344215-66344234 | Msa1303280:intron | 30.0% | |
| ATGTTCAACATCAATTCCAA+TGG | - | chr8_3:66344234-66344253 | None:intergenic | 30.0% | |
| !!! | TCCCCTTTGAAATTAGTTTT+TGG | + | chr8_3:66344428-66344447 | Msa1303280:intron | 30.0% |
| CACATCCAAAAATTCTTAGA+TGG | - | chr8_3:66344472-66344491 | None:intergenic | 30.0% | |
| !! | TCTAAGAATTTTTGGATGTG+CGG | + | chr8_3:66344472-66344491 | Msa1303280:intron | 30.0% |
| ! | TCGAGATACTTTATAATGGA+TGG | - | chr8_3:66344578-66344597 | None:intergenic | 30.0% |
| TGGTTCGAGATACTTTATAA+TGG | - | chr8_3:66344582-66344601 | None:intergenic | 30.0% | |
| GTAAATAAATCTCCTGTTGT+TGG | - | chr8_3:66344602-66344621 | None:intergenic | 30.0% | |
| TCAAATTTCCCAATATTAGG+GGG | + | chr8_3:66344653-66344672 | Msa1303280:intron | 30.0% | |
| AGAGAAAATGCAGCTAAAAA+GGG | + | chr8_3:66344676-66344695 | Msa1303280:intron | 30.0% | |
| TTTGGATCAGTGAATGTATT+TGG | - | chr8_3:66344809-66344828 | None:intergenic | 30.0% | |
| ! | TGTGATTTAGTCACACTTTT+TGG | - | chr8_3:66344827-66344846 | None:intergenic | 30.0% |
| TGCTAATGCTCCAATAAAAA+TGG | + | chr8_3:66344856-66344875 | Msa1303280:intron | 30.0% | |
| ! | CAATTTTAGATTGTCCAACA+GGG | - | chr8_3:66344886-66344905 | None:intergenic | 30.0% |
| !!! | TTTTTATCTTTGGAACCGAT+TGG | - | chr8_3:66344944-66344963 | None:intergenic | 30.0% |
| ! | AGAGTTTCTATATCCTCTTT+TGG | - | chr8_3:66345004-66345023 | None:intergenic | 30.0% |
| ATAATGATGATCAAGAACCA+AGG | + | chr8_3:66345203-66345222 | Msa1303280:intron | 30.0% | |
| TCTATTAAGGAATGTAGACA+AGG | + | chr8_3:66345226-66345245 | Msa1303280:intron | 30.0% | |
| AAGGAAAAAATTGGCCAAAA+TGG | + | chr8_3:66345245-66345264 | Msa1303280:intron | 30.0% | |
| ! | TCAATTGCATCTTTCCATTT+TGG | - | chr8_3:66345262-66345281 | None:intergenic | 30.0% |
| TGAAACCAGTTGGATATAAA+TGG | + | chr8_3:66345347-66345366 | Msa1303280:intron | 30.0% | |
| GAAACCAGTTGGATATAAAT+GGG | + | chr8_3:66345348-66345367 | Msa1303280:intron | 30.0% | |
| TGTCTCATCAAAATCAATTC+CGG | - | chr8_3:66345455-66345474 | None:intergenic | 30.0% | |
| AAAGTAGTTGCATCAATTAC+AGG | - | chr8_3:66345484-66345503 | None:intergenic | 30.0% | |
| !! | AGTGTTAAAGCGTTTTTACA+TGG | + | chr8_3:66342252-66342271 | Msa1303280:intron | 30.0% |
| ! | ATTTCTTCACCTTTTTCTTG+AGG | - | chr8_3:66342346-66342365 | None:intergenic | 30.0% |
| GAAAAAGGTGAAGAAATACT+TGG | + | chr8_3:66342349-66342368 | Msa1303280:intron | 30.0% | |
| !! | TATTGTTGCATCCATTTTTC+CGG | - | chr8_3:66342814-66342833 | None:intergenic | 30.0% |
| !! | TTGGAGAAATGTGTTTTGTT+CGG | - | chr8_3:66342896-66342915 | None:intergenic | 30.0% |
| AAGAGATATTTGTCTTCATG+AGG | + | chr8_3:66343064-66343083 | Msa1303280:intron | 30.0% | |
| AGAGATATTTGTCTTCATGA+GGG | + | chr8_3:66343065-66343084 | Msa1303280:intron | 30.0% | |
| GGGAAAAAAAATTCTAGTGA+AGG | - | chr8_3:66343209-66343228 | None:intergenic | 30.0% | |
| !!! | ACTAGAATTTTTTTTCCCAC+AGG | + | chr8_3:66343211-66343230 | Msa1303280:intron | 30.0% |
| !!! | CTAGAATTTTTTTTCCCACA+GGG | + | chr8_3:66343212-66343231 | Msa1303280:intron | 30.0% |
| CTTACTAAAATAAAACCCTG+TGG | - | chr8_3:66343230-66343249 | None:intergenic | 30.0% | |
| !!! | CACAGGGTTTTATTTTAGTA+AGG | + | chr8_3:66343228-66343247 | Msa1303280:intron | 30.0% |
| ATATAGGCAAATGAAATGGT+TGG | - | chr8_3:66347141-66347160 | None:intergenic | 30.0% | |
| GCAACCCTTCATATATATAT+AGG | - | chr8_3:66347157-66347176 | None:intergenic | 30.0% | |
| AAAACACTGTTCATTAACGT+TGG | - | chr8_3:66347867-66347886 | None:intergenic | 30.0% | |
| GTCATGAACAGTAAAATCAA+CGG | + | chr8_3:66347892-66347911 | Msa1303280:intron | 30.0% | |
| !! | GCTATGAACAGTGTTTTTAA+CGG | + | chr8_3:66347980-66347999 | Msa1303280:intron | 30.0% |
| CATATGCATATCTCTATTTG+TGG | + | chr8_3:66348116-66348135 | Msa1303280:intron | 30.0% | |
| ! | CTTCTCCTATTTCTTCAATA+AGG | - | chr8_3:66348167-66348186 | None:intergenic | 30.0% |
| !!! | ATTACTTTTTGTTTTCGTGG+AGG | + | chr8_3:66348243-66348262 | Msa1303280:intron | 30.0% |
| AGAATTATGAAAATCCCTGA+AGG | + | chr8_3:66348386-66348405 | Msa1303280:intron | 30.0% | |
| ! | GTTGTTTCCAGAAATGTTAA+GGG | - | chr8_3:66348516-66348535 | None:intergenic | 30.0% |
| ! | AGTTGTTTCCAGAAATGTTA+AGG | - | chr8_3:66348517-66348536 | None:intergenic | 30.0% |
| AATGGAGATGCCATAAAAGA+AGG | + | chr8_3:66341887-66341906 | Msa1303280:CDS | 35.0% | |
| !!! | TGCTTTTGCTTTTTGTTGCT+CGG | - | chr8_3:66341924-66341943 | None:intergenic | 35.0% |
| ! | CTTCATTTATATGGTGACGA+AGG | - | chr8_3:66341955-66341974 | None:intergenic | 35.0% |
| AGAGATATTCGTCTAAATGG+CGG | + | chr8_3:66342196-66342215 | Msa1303280:intron | 35.0% | |
| TCTAGTGATCTAACAACCAT+GGG | - | chr8_3:66342301-66342320 | None:intergenic | 35.0% | |
| ATCTAGTGATCTAACAACCA+TGG | - | chr8_3:66342302-66342321 | None:intergenic | 35.0% | |
| CTACACAAAGACATTGGAAT+GGG | + | chr8_3:66342482-66342501 | Msa1303280:intron | 35.0% | |
| GTGCCCAAACTAGAATTAAT+TGG | + | chr8_3:66342565-66342584 | Msa1303280:intron | 35.0% | |
| TTAATTGGTTATGCAGATGC+AGG | + | chr8_3:66342580-66342599 | Msa1303280:intron | 35.0% | |
| ACAGGTTACTTGTTTACAAG+TGG | + | chr8_3:66342637-66342656 | Msa1303280:intron | 35.0% | |
| CTTTACAGATCTCCATGAAA+TGG | - | chr8_3:66342671-66342690 | None:intergenic | 35.0% | |
| GTAGAGAATGTGTTTGGTTA+AGG | + | chr8_3:66342749-66342768 | Msa1303280:intron | 35.0% | |
| AAGAATTGTGGTTTATCCTC+CGG | + | chr8_3:66342792-66342811 | Msa1303280:intron | 35.0% | |
| ACTCATGATCTTCAGAAGAA+TGG | + | chr8_3:66342927-66342946 | Msa1303280:intron | 35.0% | |
| GAGATATTTGTCTTCATGAG+GGG | + | chr8_3:66343066-66343085 | Msa1303280:intron | 35.0% | |
| AGATATTTGTCTTCATGAGG+GGG | + | chr8_3:66343067-66343086 | Msa1303280:intron | 35.0% | |
| ! | TCCTGGTAAGGTTTTTAATG+AGG | + | chr8_3:66343149-66343168 | Msa1303280:intron | 35.0% |
| ATATTTATAACACTCCCCCT+TGG | - | chr8_3:66343283-66343302 | None:intergenic | 35.0% | |
| TACAATCTGTGAAACAACAG+TGG | + | chr8_3:66343396-66343415 | Msa1303280:intron | 35.0% | |
| !!! | CAAAGCGATTTTGATTTCAC+TGG | + | chr8_3:66343747-66343766 | Msa1303280:intron | 35.0% |
| GTCTATTAAAGATCTGCAGA+TGG | - | chr8_3:66343785-66343804 | None:intergenic | 35.0% | |
| TTGTTCCAGAAGAACTAATC+AGG | - | chr8_3:66343965-66343984 | None:intergenic | 35.0% | |
| TGAGTTTCTATATCCTCGTT+TGG | + | chr8_3:66344012-66344031 | Msa1303280:intron | 35.0% | |
| GAGTTTCTATATCCTCGTTT+GGG | + | chr8_3:66344013-66344032 | Msa1303280:intron | 35.0% | |
| AAAGAATGATAACCCAAACG+AGG | - | chr8_3:66344028-66344047 | None:intergenic | 35.0% | |
| TTTATTATCAACTCGCAACC+AGG | + | chr8_3:66344082-66344101 | Msa1303280:intron | 35.0% | |
| ! | TCAAGTCGTATTTTCTTGAC+AGG | - | chr8_3:66344164-66344183 | None:intergenic | 35.0% |
| GCACATGTTCATACACAAAA+TGG | + | chr8_3:66344260-66344279 | Msa1303280:intron | 35.0% | |
| ! | GAAGAGTCATGATAACTTGT+TGG | - | chr8_3:66344410-66344429 | None:intergenic | 35.0% |
| TATATTCCCAACCTTCTTTG+AGG | - | chr8_3:66344539-66344558 | None:intergenic | 35.0% | |
| AGAAGGTTGGGAATATATGT+TGG | + | chr8_3:66344542-66344561 | Msa1303280:intron | 35.0% | |
| ! | TTTTCTCTCCCCCTAATATT+GGG | - | chr8_3:66344664-66344683 | None:intergenic | 35.0% |
| ! | ATTTTCTCTCCCCCTAATAT+TGG | - | chr8_3:66344665-66344684 | None:intergenic | 35.0% |
| GAGAGAAAATGCAGCTAAAA+AGG | + | chr8_3:66344675-66344694 | Msa1303280:intron | 35.0% | |
| TCGAACAAAACAATGTGAAC+TGG | + | chr8_3:66344739-66344758 | Msa1303280:intron | 35.0% | |
| !! | ACAGGGACATCCATTTTTAT+TGG | - | chr8_3:66344869-66344888 | None:intergenic | 35.0% |
| ATAAAAATGGATGTCCCTGT+TGG | + | chr8_3:66344869-66344888 | Msa1303280:intron | 35.0% | |
| ! | GCAATTTTAGATTGTCCAAC+AGG | - | chr8_3:66344887-66344906 | None:intergenic | 35.0% |
| ! | TGCTCGAGGATTTTTATCTT+TGG | - | chr8_3:66344954-66344973 | None:intergenic | 35.0% |
| AAAAATCCTCGAGCAAGAAA+AGG | + | chr8_3:66344959-66344978 | Msa1303280:intron | 35.0% | |
| AGCAAGAAAAGGAGCAAAAA+GGG | + | chr8_3:66344970-66344989 | Msa1303280:intron | 35.0% | |
| GATATCTGATTAGGTTCTTC+TGG | - | chr8_3:66345061-66345080 | None:intergenic | 35.0% | |
| ATGTCACCAATGGAATACAA+TGG | + | chr8_3:66345116-66345135 | Msa1303280:intron | 35.0% | |
| !! | GATATGCAAAAGCATCATCA+AGG | - | chr8_3:66345159-66345178 | None:intergenic | 35.0% |
| TCAAGAACCAAGGTCTATTA+AGG | + | chr8_3:66345213-66345232 | Msa1303280:intron | 35.0% | |
| CTACATTCCTTAATAGACCT+TGG | - | chr8_3:66345223-66345242 | None:intergenic | 35.0% | |
| AACACCCATTTATATCCAAC+TGG | - | chr8_3:66345355-66345374 | None:intergenic | 35.0% | |
| AAAATCAATTCCGGGTCTTT+GGG | - | chr8_3:66345446-66345465 | None:intergenic | 35.0% | |
| GTCTCATCAAAATCAATTCC+GGG | - | chr8_3:66345454-66345473 | None:intergenic | 35.0% | |
| !! | ATTAGTCTTATAGCTCACGA+AGG | + | chr8_3:66345514-66345533 | Msa1303280:intron | 35.0% |
| !! | TTAGTCTTATAGCTCACGAA+GGG | + | chr8_3:66345515-66345534 | Msa1303280:intron | 35.0% |
| GTTGTAACAGCCTACTTATA+TGG | + | chr8_3:66345559-66345578 | Msa1303280:intron | 35.0% | |
| ATTTACATGAAACTCCCTGA+AGG | + | chr8_3:66345598-66345617 | Msa1303280:intron | 35.0% | |
| CAGGCAAATTAAATCCTTCA+GGG | - | chr8_3:66345615-66345634 | None:intergenic | 35.0% | |
| TCAGGCAAATTAAATCCTTC+AGG | - | chr8_3:66345616-66345635 | None:intergenic | 35.0% | |
| AAGCAAATAGTTCAGGATCT+AGG | + | chr8_3:66345635-66345654 | Msa1303280:intron | 35.0% | |
| AGCAAATAGTTCAGGATCTA+GGG | + | chr8_3:66345636-66345655 | Msa1303280:intron | 35.0% | |
| ! | AGTGAATATTTGCTGAAGGA+AGG | + | chr8_3:66345733-66345752 | Msa1303280:intron | 35.0% |
| !! | GGAAAGACAAAGTTTTGTCT+TGG | + | chr8_3:66345919-66345938 | Msa1303280:intron | 35.0% |
| CAAATTGAGTACCTAAATGG+CGG | + | chr8_3:66345946-66345965 | Msa1303280:intron | 35.0% | |
| AAATTGAGTACCTAAATGGC+GGG | + | chr8_3:66345947-66345966 | Msa1303280:intron | 35.0% | |
| TCTAGTGATCTAACAACCAT+GGG | - | chr8_3:66342301-66342320 | None:intergenic | 35.0% | |
| ATCTAGTGATCTAACAACCA+TGG | - | chr8_3:66342302-66342321 | None:intergenic | 35.0% | |
| CTACACAAAGACATTGGAAT+GGG | + | chr8_3:66342482-66342501 | Msa1303280:intron | 35.0% | |
| GTGCCCAAACTAGAATTAAT+TGG | + | chr8_3:66342565-66342584 | Msa1303280:intron | 35.0% | |
| TTAATTGGTTATGCAGATGC+AGG | + | chr8_3:66342580-66342599 | Msa1303280:intron | 35.0% | |
| ACAGGTTACTTGTTTACAAG+TGG | + | chr8_3:66342637-66342656 | Msa1303280:intron | 35.0% | |
| CTTTACAGATCTCCATGAAA+TGG | - | chr8_3:66342671-66342690 | None:intergenic | 35.0% | |
| GTAGAGAATGTGTTTGGTTA+AGG | + | chr8_3:66342749-66342768 | Msa1303280:intron | 35.0% | |
| AAGAATTGTGGTTTATCCTC+CGG | + | chr8_3:66342792-66342811 | Msa1303280:intron | 35.0% | |
| ACTCATGATCTTCAGAAGAA+TGG | + | chr8_3:66342927-66342946 | Msa1303280:intron | 35.0% | |
| GAGATATTTGTCTTCATGAG+GGG | + | chr8_3:66343066-66343085 | Msa1303280:intron | 35.0% | |
| AGATATTTGTCTTCATGAGG+GGG | + | chr8_3:66343067-66343086 | Msa1303280:intron | 35.0% | |
| ATATTTATAACACTCCCCCT+TGG | - | chr8_3:66343283-66343302 | None:intergenic | 35.0% | |
| ! | GTCCTGAACAGTGATTTTAA+CGG | + | chr8_3:66347914-66347933 | Msa1303280:intron | 35.0% |
| TTCGCCCTTATTGAAGAAAT+AGG | + | chr8_3:66348159-66348178 | Msa1303280:intron | 35.0% | |
| ACACAAGCTAAGACTAGAAA+TGG | - | chr8_3:66348222-66348241 | None:intergenic | 35.0% | |
| TATGAAAATCCCTGAAGGAT+TGG | + | chr8_3:66348391-66348410 | Msa1303280:intron | 35.0% | |
| TTCATTTGTCCAATCCTTCA+GGG | - | chr8_3:66348403-66348422 | None:intergenic | 35.0% | |
| TTTCATTTGTCCAATCCTTC+AGG | - | chr8_3:66348404-66348423 | None:intergenic | 35.0% | |
| TCTCTCAAAACTTCACTTTG+AGG | + | chr8_3:66348490-66348509 | Msa1303280:CDS | 35.0% | |
| TACTTAGCTGCTGAAGGAAA+TGG | + | chr8_3:66341869-66341888 | Msa1303280:CDS | 40.0% | |
| AGTTTATTCCAGAGCACAAG+TGG | - | chr8_3:66342010-66342029 | None:intergenic | 40.0% | |
| GGCACTACACAGATAATTGA+AGG | + | chr8_3:66342076-66342095 | Msa1303280:intron | 40.0% | |
| ACACAGATAATTGAAGGCTC+CGG | + | chr8_3:66342082-66342101 | Msa1303280:intron | 40.0% | |
| GAGATATTCGTCTAAATGGC+GGG | + | chr8_3:66342197-66342216 | Msa1303280:intron | 40.0% | |
| TCATCCATTATCTACTCCCA+TGG | + | chr8_3:66342282-66342301 | Msa1303280:intron | 40.0% | |
| ACAACCATGGGAGTAGATAA+TGG | - | chr8_3:66342289-66342308 | None:intergenic | 40.0% | |
| ! | CCTTTTTCTTGAGGTCTGAA+AGG | - | chr8_3:66342337-66342356 | None:intergenic | 40.0% |
| CCTTTCAGACCTCAAGAAAA+AGG | + | chr8_3:66342334-66342353 | Msa1303280:intron | 40.0% | |
| GTACCATATCTCAGTGCAAT+AGG | + | chr8_3:66342379-66342398 | Msa1303280:intron | 40.0% | |
| CTTCACCTACACAAAGACAT+TGG | + | chr8_3:66342476-66342495 | Msa1303280:intron | 40.0% | |
| CCATTCCAATGTCTTTGTGT+AGG | - | chr8_3:66342484-66342503 | None:intergenic | 40.0% | |
| CCTACACAAAGACATTGGAA+TGG | + | chr8_3:66342481-66342500 | Msa1303280:intron | 40.0% | |
| CTTCGAGGTACAATGGATAT+GGG | + | chr8_3:66342526-66342545 | Msa1303280:intron | 40.0% | |
| TATTTGTCAGATCCTCACCA+TGG | + | chr8_3:66342604-66342623 | Msa1303280:intron | 40.0% | |
| AACCTGTTTGTGATCTACCA+TGG | - | chr8_3:66342624-66342643 | None:intergenic | 40.0% | |
| AGGCAAGTAGAGAATGTGTT+TGG | + | chr8_3:66342743-66342762 | Msa1303280:intron | 40.0% | |
| TGGTTTATCCTCCGGAAAAA+TGG | + | chr8_3:66342800-66342819 | Msa1303280:intron | 40.0% | |
| TGGGATAAAACCTAGGTGAA+GGG | - | chr8_3:66343121-66343140 | None:intergenic | 40.0% | |
| ATGGGATAAAACCTAGGTGA+AGG | - | chr8_3:66343122-66343141 | None:intergenic | 40.0% | |
| !! | TCACCTAGGTTTTATCCCAT+TGG | + | chr8_3:66343122-66343141 | Msa1303280:intron | 40.0% |
| !! | CACCTAGGTTTTATCCCATT+GGG | + | chr8_3:66343123-66343142 | Msa1303280:intron | 40.0% |
| AACCCAATGGGATAAAACCT+AGG | - | chr8_3:66343128-66343147 | None:intergenic | 40.0% | |
| ! | TTTATCCCATTGGGTTTTCC+TGG | + | chr8_3:66343132-66343151 | Msa1303280:intron | 40.0% |
| GCCTCATTAAAAACCTTACC+AGG | - | chr8_3:66343153-66343172 | None:intergenic | 40.0% | |
| TTAATGAGGCATATCCTCGA+TGG | + | chr8_3:66343253-66343272 | Msa1303280:intron | 40.0% | |
| ! | ATATTAGTGGGAGGCATGAA+AGG | - | chr8_3:66343336-66343355 | None:intergenic | 40.0% |
| ! | AGGTACCTGATTAGTTCTTC+TGG | + | chr8_3:66343957-66343976 | Msa1303280:intron | 40.0% |
| TGATTGAGATGAGAACTCAG+CGG | - | chr8_3:66344192-66344211 | None:intergenic | 40.0% | |
| TGTGTATGAACATGTGCTAC+AGG | - | chr8_3:66344257-66344276 | None:intergenic | 40.0% | |
| ! | AGTTTGCTTCTCATGAGAAG+TGG | - | chr8_3:66344329-66344348 | None:intergenic | 40.0% |
| CAAACTTCCAGTTTCCACTT+GGG | + | chr8_3:66344343-66344362 | Msa1303280:intron | 40.0% | |
| AAACTTCCAGTTTCCACTTG+GGG | + | chr8_3:66344344-66344363 | Msa1303280:intron | 40.0% | |
| AAGTATCTCGAACCAACAAC+AGG | + | chr8_3:66344587-66344606 | Msa1303280:intron | 40.0% | |
| AGCTAAAAAGGGAGATCAGT+TGG | + | chr8_3:66344687-66344706 | Msa1303280:intron | 40.0% | |
| ! | TTTATTGGAGCATTAGCAGC+TGG | - | chr8_3:66344854-66344873 | None:intergenic | 40.0% |
| GAGCAAGAAAAGGAGCAAAA+AGG | + | chr8_3:66344969-66344988 | Msa1303280:intron | 40.0% | |
| TCGGTTCCATTGTATTCCAT+TGG | - | chr8_3:66345125-66345144 | None:intergenic | 40.0% | |
| ! | CATCAAGGTTGACTTCATCT+CGG | - | chr8_3:66345144-66345163 | None:intergenic | 40.0% |
| CTGTTGTCCAAACACCTAAA+GGG | + | chr8_3:66345323-66345342 | Msa1303280:intron | 40.0% | |
| TGTTGTCCAAACACCTAAAG+GGG | + | chr8_3:66345324-66345343 | Msa1303280:intron | 40.0% | |
| ATCCGAAAACGCAATGAGAA+TGG | + | chr8_3:66345376-66345395 | Msa1303280:intron | 40.0% | |
| ! | CACCATTCTCATTGCGTTTT+CGG | - | chr8_3:66345381-66345400 | None:intergenic | 40.0% |
| !! | AAAGCAAGACTTGTTGCTCA+AGG | + | chr8_3:66345415-66345434 | Msa1303280:intron | 40.0% |
| !! | AAGCAAGACTTGTTGCTCAA+GGG | + | chr8_3:66345416-66345435 | Msa1303280:intron | 40.0% |
| CAAAATCAATTCCGGGTCTT+TGG | - | chr8_3:66345447-66345466 | None:intergenic | 40.0% | |
| GTCAAGTGAGCCATATAAGT+AGG | - | chr8_3:66345572-66345591 | None:intergenic | 40.0% | |
| TTGCCTGAAGCAAATAGTTC+AGG | + | chr8_3:66345628-66345647 | Msa1303280:intron | 40.0% | |
| GATCCTGAACTATTTGCTTC+AGG | - | chr8_3:66345634-66345653 | None:intergenic | 40.0% | |
| ! | CTCTATGGGCTAAAACAATC+AGG | + | chr8_3:66345688-66345707 | Msa1303280:intron | 40.0% |
| TAAAACAATCAGGACGCATG+TGG | + | chr8_3:66345698-66345717 | Msa1303280:intron | 40.0% | |
| CCTTCAGCAAATATTCACTG+AGG | - | chr8_3:66345732-66345751 | None:intergenic | 40.0% | |
| ! | CCTCAGTGAATATTTGCTGA+AGG | + | chr8_3:66345729-66345748 | Msa1303280:intron | 40.0% |
| GAGTTCGAGATGAAAGACTT+AGG | + | chr8_3:66345898-66345917 | Msa1303280:intron | 40.0% | |
| TCATCCATTATCTACTCCCA+TGG | + | chr8_3:66342282-66342301 | Msa1303280:intron | 40.0% | |
| ACAACCATGGGAGTAGATAA+TGG | - | chr8_3:66342289-66342308 | None:intergenic | 40.0% | |
| ! | CCTTTTTCTTGAGGTCTGAA+AGG | - | chr8_3:66342337-66342356 | None:intergenic | 40.0% |
| CCTTTCAGACCTCAAGAAAA+AGG | + | chr8_3:66342334-66342353 | Msa1303280:intron | 40.0% | |
| GTACCATATCTCAGTGCAAT+AGG | + | chr8_3:66342379-66342398 | Msa1303280:intron | 40.0% | |
| CTTCACCTACACAAAGACAT+TGG | + | chr8_3:66342476-66342495 | Msa1303280:intron | 40.0% | |
| CCATTCCAATGTCTTTGTGT+AGG | - | chr8_3:66342484-66342503 | None:intergenic | 40.0% | |
| CCTACACAAAGACATTGGAA+TGG | + | chr8_3:66342481-66342500 | Msa1303280:intron | 40.0% | |
| CTTCGAGGTACAATGGATAT+GGG | + | chr8_3:66342526-66342545 | Msa1303280:intron | 40.0% | |
| TATTTGTCAGATCCTCACCA+TGG | + | chr8_3:66342604-66342623 | Msa1303280:intron | 40.0% | |
| AACCTGTTTGTGATCTACCA+TGG | - | chr8_3:66342624-66342643 | None:intergenic | 40.0% | |
| AGGCAAGTAGAGAATGTGTT+TGG | + | chr8_3:66342743-66342762 | Msa1303280:intron | 40.0% | |
| TGGTTTATCCTCCGGAAAAA+TGG | + | chr8_3:66342800-66342819 | Msa1303280:intron | 40.0% | |
| TGGGATAAAACCTAGGTGAA+GGG | - | chr8_3:66343121-66343140 | None:intergenic | 40.0% | |
| ATGGGATAAAACCTAGGTGA+AGG | - | chr8_3:66343122-66343141 | None:intergenic | 40.0% | |
| !! | TCACCTAGGTTTTATCCCAT+TGG | + | chr8_3:66343122-66343141 | Msa1303280:intron | 40.0% |
| !! | CACCTAGGTTTTATCCCATT+GGG | + | chr8_3:66343123-66343142 | Msa1303280:intron | 40.0% |
| AACCCAATGGGATAAAACCT+AGG | - | chr8_3:66343128-66343147 | None:intergenic | 40.0% | |
| ! | TTTATCCCATTGGGTTTTCC+TGG | + | chr8_3:66343132-66343151 | Msa1303280:intron | 40.0% |
| ! | TCCTGGTAAGGTTTTTAACG+AGG | + | chr8_3:66346900-66346919 | Msa1303280:intron | 40.0% |
| TTAATGAGGCATATCCTCGA+TGG | + | chr8_3:66343253-66343272 | Msa1303280:intron | 40.0% | |
| GAGCATAGTAAATGGTTGGT+GGG | - | chr8_3:66347095-66347114 | None:intergenic | 40.0% | |
| TGGGAGTAAATAATGGTAGG+CGG | - | chr8_3:66347118-66347137 | None:intergenic | 40.0% | |
| TGGTGGGAGTAAATAATGGT+AGG | - | chr8_3:66347121-66347140 | None:intergenic | 40.0% | |
| !! | TGGTTGGTGGGAGTAAATAA+TGG | - | chr8_3:66347125-66347144 | None:intergenic | 40.0% |
| AGGCAAATGAAATGGTTGGT+GGG | - | chr8_3:66347137-66347156 | None:intergenic | 40.0% | |
| TAGGCAAATGAAATGGTTGG+TGG | - | chr8_3:66347138-66347157 | None:intergenic | 40.0% | |
| !! | ATCAGCACGATTGTTTCTAC+CGG | + | chr8_3:66347290-66347309 | Msa1303280:intron | 40.0% |
| GACCGTTAAAATCACTGTTC+AGG | - | chr8_3:66347919-66347938 | None:intergenic | 40.0% | |
| ! | GTCCTGAACAGTGTTTTCAA+CGG | + | chr8_3:66347936-66347955 | Msa1303280:intron | 40.0% |
| ! | TTTGAGGCCCTTAACATTTC+TGG | + | chr8_3:66348506-66348525 | Msa1303280:CDS | 40.0% |
| CAAGTGGATCTTTCACAGTG+AGG | - | chr8_3:66341994-66342013 | None:intergenic | 45.0% | |
| TGAAAGATCCACTTGTGCTC+TGG | + | chr8_3:66341999-66342018 | Msa1303280:intron | 45.0% | |
| GCACTGAGATATGGTACTTC+AGG | - | chr8_3:66342376-66342395 | None:intergenic | 45.0% | |
| GCACCTATTGCACTGAGATA+TGG | - | chr8_3:66342385-66342404 | None:intergenic | 45.0% | |
| CATGTACTTCGTTACCTTCG+AGG | + | chr8_3:66342511-66342530 | Msa1303280:intron | 45.0% | |
| TCGTTACCTTCGAGGTACAA+TGG | + | chr8_3:66342519-66342538 | Msa1303280:intron | 45.0% | |
| CCATATCCATTGTACCTCGA+AGG | - | chr8_3:66342528-66342547 | None:intergenic | 45.0% | |
| CCTTCGAGGTACAATGGATA+TGG | + | chr8_3:66342525-66342544 | Msa1303280:intron | 45.0% | |
| GTTTGTGATCTACCATGGTG+AGG | - | chr8_3:66342619-66342638 | None:intergenic | 45.0% | |
| CACCATGGTAGATCACAAAC+AGG | + | chr8_3:66342619-66342638 | Msa1303280:intron | 45.0% | |
| GTGGAGAAACAGCCATTTCA+TGG | + | chr8_3:66342656-66342675 | Msa1303280:intron | 45.0% | |
| ! | AGAACTTTTAGCACTCCACG+AGG | + | chr8_3:66342723-66342742 | Msa1303280:intron | 45.0% |
| !! | TGTTGCATCCATTTTTCCGG+AGG | - | chr8_3:66342811-66342830 | None:intergenic | 45.0% |
| TGCATCGCTCAGTTGAAAGA+AGG | + | chr8_3:66342855-66342874 | Msa1303280:intron | 45.0% | |
| ! | CACTCTTTTTCCCTTCACCT+AGG | + | chr8_3:66343108-66343127 | Msa1303280:intron | 45.0% |
| CCTTACCAGGAAAACCCAAT+GGG | - | chr8_3:66343140-66343159 | None:intergenic | 45.0% | |
| ACCTTACCAGGAAAACCCAA+TGG | - | chr8_3:66343141-66343160 | None:intergenic | 45.0% | |
| ATATCCTCGATGGACATCCA+AGG | + | chr8_3:66343263-66343282 | Msa1303280:intron | 45.0% | |
| TATCCTCGATGGACATCCAA+GGG | + | chr8_3:66343264-66343283 | Msa1303280:intron | 45.0% | |
| ! | GAGGCATGAAAGGATTAGTG+GGG | - | chr8_3:66343326-66343345 | None:intergenic | 45.0% |
| ! | GGAGGCATGAAAGGATTAGT+GGG | - | chr8_3:66343327-66343346 | None:intergenic | 45.0% |
| ACTTCACATCTTCGAGTGTG+CGG | + | chr8_3:66343698-66343717 | Msa1303280:intron | 45.0% | |
| !! | CGTCGACGTTGACTTCATTT+CGG | + | chr8_3:66343865-66343884 | Msa1303280:intron | 45.0% |
| GCAAACTTCCAGTTTCCACT+TGG | + | chr8_3:66344342-66344361 | Msa1303280:intron | 45.0% | |
| CATAATTGCATGTCCCCAAG+TGG | - | chr8_3:66344360-66344379 | None:intergenic | 45.0% | |
| CTAAGATGGGTCCTCAAAGA+AGG | + | chr8_3:66344525-66344544 | Msa1303280:intron | 45.0% | |
| ATGGGTCCTCAAAGAAGGTT+GGG | + | chr8_3:66344530-66344549 | Msa1303280:intron | 45.0% | |
| TTGAAGCGTGGTAGACCAAT+CGG | + | chr8_3:66344926-66344945 | Msa1303280:intron | 45.0% | |
| ! | TTTGCTCCTTTTCTTGCTCG+AGG | - | chr8_3:66344968-66344987 | None:intergenic | 45.0% |
| AAGGGAAGATGAGCCAAAAG+AGG | + | chr8_3:66344988-66345007 | Msa1303280:intron | 45.0% | |
| CCTTTAGGTGTTTGGACAAC+AGG | - | chr8_3:66345325-66345344 | None:intergenic | 45.0% | |
| CCTGTTGTCCAAACACCTAA+AGG | + | chr8_3:66345322-66345341 | Msa1303280:intron | 45.0% | |
| GTTTCACCCCTTTAGGTGTT+TGG | - | chr8_3:66345333-66345352 | None:intergenic | 45.0% | |
| AGGGCTCAATTTGCACATGT+TGG | + | chr8_3:66345534-66345553 | Msa1303280:intron | 45.0% | |
| GCACTGAGATATGGTACTTC+AGG | - | chr8_3:66342376-66342395 | None:intergenic | 45.0% | |
| GCACCTATTGCACTGAGATA+TGG | - | chr8_3:66342385-66342404 | None:intergenic | 45.0% | |
| CATGTACTTCGTTACCTTCG+AGG | + | chr8_3:66342511-66342530 | Msa1303280:intron | 45.0% | |
| TCGTTACCTTCGAGGTACAA+TGG | + | chr8_3:66342519-66342538 | Msa1303280:intron | 45.0% | |
| CCATATCCATTGTACCTCGA+AGG | - | chr8_3:66342528-66342547 | None:intergenic | 45.0% | |
| CCTTCGAGGTACAATGGATA+TGG | + | chr8_3:66342525-66342544 | Msa1303280:intron | 45.0% | |
| GTTTGTGATCTACCATGGTG+AGG | - | chr8_3:66342619-66342638 | None:intergenic | 45.0% | |
| CACCATGGTAGATCACAAAC+AGG | + | chr8_3:66342619-66342638 | Msa1303280:intron | 45.0% | |
| GTGGAGAAACAGCCATTTCA+TGG | + | chr8_3:66342656-66342675 | Msa1303280:intron | 45.0% | |
| ! | AGAACTTTTAGCACTCCACG+AGG | + | chr8_3:66342723-66342742 | Msa1303280:intron | 45.0% |
| !! | TGTTGCATCCATTTTTCCGG+AGG | - | chr8_3:66342811-66342830 | None:intergenic | 45.0% |
| TGCATCGCTCAGTTGAAAGA+AGG | + | chr8_3:66342855-66342874 | Msa1303280:intron | 45.0% | |
| ! | CACTCTTTTTCCCTTCACCT+AGG | + | chr8_3:66343108-66343127 | Msa1303280:intron | 45.0% |
| CCTTACCAGGAAAACCCAAT+GGG | - | chr8_3:66343140-66343159 | None:intergenic | 45.0% | |
| ACCTTACCAGGAAAACCCAA+TGG | - | chr8_3:66343141-66343160 | None:intergenic | 45.0% | |
| GCCTCGTTAAAAACCTTACC+AGG | - | chr8_3:66346904-66346923 | None:intergenic | 45.0% | |
| ATATCCTCGATGGACATCCA+AGG | + | chr8_3:66343263-66343282 | Msa1303280:intron | 45.0% | |
| TATCCTCGATGGACATCCAA+GGG | + | chr8_3:66343264-66343283 | Msa1303280:intron | 45.0% | |
| GGAGCATAGTAAATGGTTGG+TGG | - | chr8_3:66347096-66347115 | None:intergenic | 45.0% | |
| GGGAGTAAATAATGGTAGGC+GGG | - | chr8_3:66347117-66347136 | None:intergenic | 45.0% | |
| CTAGCAGTAGTGTAAGCTTC+CGG | - | chr8_3:66347312-66347331 | None:intergenic | 45.0% | |
| TTGCCAGTTCTCTATAACCG+GGG | - | chr8_3:66347401-66347420 | None:intergenic | 45.0% | |
| GTTGCCAGTTCTCTATAACC+GGG | - | chr8_3:66347402-66347421 | None:intergenic | 45.0% | |
| GGTTGCCAGTTCTCTATAAC+CGG | - | chr8_3:66347403-66347422 | None:intergenic | 45.0% | |
| GACCGTTGAAAACACTGTTC+AGG | - | chr8_3:66347941-66347960 | None:intergenic | 45.0% | |
| !!! | TATTATTGTTTTTATTATTA+TGG | + | chr8_3:66347451-66347470 | Msa1303280:intron | 5.0% |
| !! | ATTAAATATAAAAATTAGAT+GGG | - | chr8_3:66347676-66347695 | None:intergenic | 5.0% |
| CACATTCTCTACTTGCCTCG+TGG | - | chr8_3:66342741-66342760 | None:intergenic | 50.0% | |
| ! | CCCATTGGGTTTTCCTGGTA+AGG | + | chr8_3:66343137-66343156 | Msa1303280:intron | 50.0% |
| ATCCTCGATGGACATCCAAG+GGG | + | chr8_3:66343265-66343284 | Msa1303280:intron | 50.0% | |
| ! | GGGAGGCATGAAAGGATTAG+TGG | - | chr8_3:66343328-66343347 | None:intergenic | 50.0% |
| GCACGTAGGCTTATAGCTTG+CGG | + | chr8_3:66343365-66343384 | Msa1303280:intron | 50.0% | |
| CTAGCAATCTTGCAAACGCC+TGG | - | chr8_3:66344103-66344122 | None:intergenic | 50.0% | |
| !! | GTGCGTTGTGGTGGATGAAT+TGG | - | chr8_3:66344506-66344525 | None:intergenic | 50.0% |
| TCCACCACAACGCACTAAGA+TGG | + | chr8_3:66344511-66344530 | Msa1303280:intron | 50.0% | |
| CCACCACAACGCACTAAGAT+GGG | + | chr8_3:66344512-66344531 | Msa1303280:intron | 50.0% | |
| GATGGGTCCTCAAAGAAGGT+TGG | + | chr8_3:66344529-66344548 | Msa1303280:intron | 50.0% | |
| ! | CCAACTGGTTTCACCCCTTT+AGG | - | chr8_3:66345340-66345359 | None:intergenic | 50.0% |
| CCTAAAGGGGTGAAACCAGT+TGG | + | chr8_3:66345337-66345356 | Msa1303280:intron | 50.0% | |
| ! | CAAGGGTTTTCCCAAAGACC+CGG | + | chr8_3:66345433-66345452 | Msa1303280:intron | 50.0% |
| GCACAAGAATCCCGCCATTT+AGG | - | chr8_3:66342210-66342229 | None:intergenic | 50.0% | |
| CACATTCTCTACTTGCCTCG+TGG | - | chr8_3:66342741-66342760 | None:intergenic | 50.0% | |
| ! | CCCATTGGGTTTTCCTGGTA+AGG | + | chr8_3:66343137-66343156 | Msa1303280:intron | 50.0% |
| ATCCTCGATGGACATCCAAG+GGG | + | chr8_3:66343265-66343284 | Msa1303280:intron | 50.0% | |
| ! | GCGGGAGCATAGTAAATGGT+TGG | - | chr8_3:66347099-66347118 | None:intergenic | 50.0% |
| ! | GTAGGCGGGAGCATAGTAAA+TGG | - | chr8_3:66347103-66347122 | None:intergenic | 50.0% |
| CGGAAGCTTACACTACTGCT+AGG | + | chr8_3:66347310-66347329 | Msa1303280:intron | 50.0% | |
| TTGCCCCGGTTATAGAGAAC+TGG | + | chr8_3:66347395-66347414 | Msa1303280:intron | 50.0% | |
| TCCTCGATGGACATCCAAGG+GGG | + | chr8_3:66343266-66343285 | Msa1303280:intron | 55.0% | |
| ! | TCTTCGAGTGTGCGGACTAC+AGG | + | chr8_3:66343706-66343725 | Msa1303280:intron | 55.0% |
| GCATGTCCCCAAGTGGAAAC+TGG | - | chr8_3:66344353-66344372 | None:intergenic | 55.0% | |
| CCCATCTTAGTGCGTTGTGG+TGG | - | chr8_3:66344515-66344534 | None:intergenic | 55.0% | |
| GGACCCATCTTAGTGCGTTG+TGG | - | chr8_3:66344518-66344537 | None:intergenic | 55.0% | |
| TCTGAACCACGCTTGAAGCG+TGG | + | chr8_3:66344914-66344933 | Msa1303280:intron | 55.0% | |
| TCCTCGATGGACATCCAAGG+GGG | + | chr8_3:66343266-66343285 | Msa1303280:intron | 55.0% | |
| TCCCCCTTGGATGTCCATCG+AGG | - | chr8_3:66343270-66343289 | None:intergenic | 60.0% | |
| GGTCTACCACGCTTCAAGCG+TGG | - | chr8_3:66344923-66344942 | None:intergenic | 60.0% | |
| TCCCCCTTGGATGTCCATCG+AGG | - | chr8_3:66343270-66343289 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 66341866 | 66348542 | 66341866 | ID=Msa1303280;Name=Msa1303280 |
| chr8_3 | mRNA | 66341866 | 66348542 | 66341866 | ID=Msa1303280-mRNA-1;Parent=Msa1303280;Name=Msa1303280-mRNA-1;_AED=0.43;_eAED=0.61;_QI=0|0|0|1|0|0|2|0|65 |
| chr8_3 | exon | 66341866 | 66341997 | 66341866 | ID=Msa1303280-mRNA-1:exon:20158;Parent=Msa1303280-mRNA-1 |
| chr8_3 | exon | 66348477 | 66348542 | 66348477 | ID=Msa1303280-mRNA-1:exon:20159;Parent=Msa1303280-mRNA-1 |
| chr8_3 | CDS | 66341866 | 66341997 | 66341866 | ID=Msa1303280-mRNA-1:cds;Parent=Msa1303280-mRNA-1 |
| chr8_3 | CDS | 66348477 | 66348542 | 66348477 | ID=Msa1303280-mRNA-1:cds;Parent=Msa1303280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
