Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0871720 | XP_013450954.2 | 94.145 | 427 | 22 | 1 | 1 | 427 | 1 | 424 | 0.0 | 827 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0871720 | sp|Q9FLE8|Y5986_ARATH | 47.368 | 437 | 171 | 15 | 1 | 426 | 1 | 389 | 5.18e-113 | 340 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0871720 | A0A396H9Q3 | 94.145 | 427 | 22 | 1 | 1 | 427 | 1 | 424 | 0.0 | 827 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001960 | Msa0871720 | 0.802281 | 6.044910e-49 | -8.615850e-47 |
| Msa0002680 | Msa0871720 | 0.826661 | 2.400114e-54 | -8.615850e-47 |
| Msa0002710 | Msa0871720 | 0.807871 | 4.090663e-50 | -8.615850e-47 |
| Msa0011930 | Msa0871720 | 0.832724 | 8.028970e-56 | -8.615850e-47 |
| Msa0030160 | Msa0871720 | 0.818474 | 1.924044e-52 | -8.615850e-47 |
| Msa0035120 | Msa0871720 | 0.863322 | 2.704734e-64 | -8.615850e-47 |
| Msa0036890 | Msa0871720 | 0.806983 | 6.311547e-50 | -8.615850e-47 |
| Msa0039250 | Msa0871720 | 0.810851 | 9.386091e-51 | -8.615850e-47 |
| Msa0039570 | Msa0871720 | 0.822838 | 1.912148e-53 | -8.615850e-47 |
| Msa0052870 | Msa0871720 | 0.821152 | 4.698986e-53 | -8.615850e-47 |
| Msa0053860 | Msa0871720 | 0.805720 | 1.164624e-49 | -8.615850e-47 |
| Msa0056450 | Msa0871720 | 0.820060 | 8.372854e-53 | -8.615850e-47 |
| Msa0084970 | Msa0871720 | 0.804223 | 2.395311e-49 | -8.615850e-47 |
| Msa0089980 | Msa0871720 | 0.827633 | 1.404964e-54 | -8.615850e-47 |
| Msa0090010 | Msa0871720 | 0.824863 | 6.410534e-54 | -8.615850e-47 |
| Msa0093850 | Msa0871720 | 0.818168 | 2.256183e-52 | -8.615850e-47 |
| Msa0098470 | Msa0871720 | 0.826948 | 2.049494e-54 | -8.615850e-47 |
| Msa0106620 | Msa0871720 | 0.848954 | 4.408054e-60 | -8.615850e-47 |
| Msa0106710 | Msa0871720 | 0.832724 | 8.030049e-56 | -8.615850e-47 |
| Msa0108390 | Msa0871720 | 0.830622 | 2.648112e-55 | -8.615850e-47 |
| Msa0108410 | Msa0871720 | 0.830854 | 2.323238e-55 | -8.615850e-47 |
| Msa0112270 | Msa0871720 | 0.833596 | 4.869301e-56 | -8.615850e-47 |
| Msa0116790 | Msa0871720 | 0.825784 | 3.880193e-54 | -8.615850e-47 |
| Msa0607320 | Msa0871720 | 0.831342 | 1.762618e-55 | -8.615850e-47 |
| Msa0619050 | Msa0871720 | 0.815963 | 7.060196e-52 | -8.615850e-47 |
| Msa0619420 | Msa0871720 | 0.828071 | 1.102337e-54 | -8.615850e-47 |
| Msa0626270 | Msa0871720 | 0.827107 | 1.877761e-54 | -8.615850e-47 |
| Msa0626450 | Msa0871720 | 0.800821 | 1.203926e-48 | -8.615850e-47 |
| Msa0626460 | Msa0871720 | 0.819032 | 1.436862e-52 | -8.615850e-47 |
| Msa0626490 | Msa0871720 | 0.801675 | 8.051900e-49 | -8.615850e-47 |
| Msa0630940 | Msa0871720 | 0.827811 | 1.273092e-54 | -8.615850e-47 |
| Msa0638350 | Msa0871720 | 0.817067 | 3.995909e-52 | -8.615850e-47 |
| Msa0638360 | Msa0871720 | 0.834016 | 3.824840e-56 | -8.615850e-47 |
| Msa0640500 | Msa0871720 | 0.800095 | 1.692431e-48 | -8.615850e-47 |
| Msa0655920 | Msa0871720 | 0.811858 | 5.671868e-51 | -8.615850e-47 |
| Msa0659550 | Msa0871720 | 0.802394 | 5.728293e-49 | -8.615850e-47 |
| Msa0661320 | Msa0871720 | 0.816617 | 5.041612e-52 | -8.615850e-47 |
| Msa0663270 | Msa0871720 | 0.814427 | 1.549551e-51 | -8.615850e-47 |
| Msa0664090 | Msa0871720 | 0.822585 | 2.189042e-53 | -8.615850e-47 |
| Msa0664150 | Msa0871720 | 0.800002 | 1.767758e-48 | -8.615850e-47 |
| Msa0664540 | Msa0871720 | 0.828170 | 1.043478e-54 | -8.615850e-47 |
| Msa0664600 | Msa0871720 | 0.806393 | 8.408209e-50 | -8.615850e-47 |
| Msa0669180 | Msa0871720 | 0.815970 | 7.036079e-52 | -8.615850e-47 |
| Msa0689760 | Msa0871720 | 0.814504 | 1.489925e-51 | -8.615850e-47 |
| Msa0692880 | Msa0871720 | 0.842437 | 2.587870e-58 | -8.615850e-47 |
| Msa0693330 | Msa0871720 | 0.803070 | 4.154610e-49 | -8.615850e-47 |
| Msa0696850 | Msa0871720 | 0.823714 | 1.193521e-53 | -8.615850e-47 |
| Msa0696860 | Msa0871720 | 0.816712 | 4.800747e-52 | -8.615850e-47 |
| Msa0698100 | Msa0871720 | 0.816963 | 4.216356e-52 | -8.615850e-47 |
| Msa0698290 | Msa0871720 | 0.806286 | 8.853695e-50 | -8.615850e-47 |
| Msa0701360 | Msa0871720 | 0.815035 | 1.136060e-51 | -8.615850e-47 |
| Msa0702720 | Msa0871720 | 0.819405 | 1.181642e-52 | -8.615850e-47 |
| Msa0705580 | Msa0871720 | 0.818507 | 1.891010e-52 | -8.615850e-47 |
| Msa0706760 | Msa0871720 | 0.810707 | 1.008188e-50 | -8.615850e-47 |
| Msa0708310 | Msa0871720 | 0.804765 | 1.845905e-49 | -8.615850e-47 |
| Msa0712260 | Msa0871720 | 0.810237 | 1.273844e-50 | -8.615850e-47 |
| Msa0713680 | Msa0871720 | 0.804823 | 1.795606e-49 | -8.615850e-47 |
| Msa0715420 | Msa0871720 | 0.808695 | 2.729936e-50 | -8.615850e-47 |
| Msa0716860 | Msa0871720 | 0.818334 | 2.069900e-52 | -8.615850e-47 |
| Msa0738240 | Msa0871720 | 0.819550 | 1.095090e-52 | -8.615850e-47 |
| Msa0751260 | Msa0871720 | 0.844768 | 6.161997e-59 | -8.615850e-47 |
| Msa0756380 | Msa0871720 | 0.800742 | 1.249741e-48 | -8.615850e-47 |
| Msa0757800 | Msa0871720 | 0.822276 | 2.582868e-53 | -8.615850e-47 |
| Msa0760560 | Msa0871720 | 0.816350 | 5.786940e-52 | -8.615850e-47 |
| Msa0784480 | Msa0871720 | 0.800336 | 1.511877e-48 | -8.615850e-47 |
| Msa0789100 | Msa0871720 | 0.814556 | 1.450634e-51 | -8.615850e-47 |
| Msa0795070 | Msa0871720 | 0.845476 | 3.966712e-59 | -8.615850e-47 |
| Msa0828240 | Msa0871720 | 0.827348 | 1.644103e-54 | -8.615850e-47 |
| Msa0833530 | Msa0871720 | 0.820283 | 7.443723e-53 | -8.615850e-47 |
| Msa0125650 | Msa0871720 | 0.819267 | 1.270128e-52 | -8.615850e-47 |
| Msa0133720 | Msa0871720 | 0.805333 | 1.404417e-49 | -8.615850e-47 |
| Msa0133820 | Msa0871720 | 0.812740 | 3.641420e-51 | -8.615850e-47 |
| Msa0138360 | Msa0871720 | 0.844784 | 6.102029e-59 | -8.615850e-47 |
| Msa0141400 | Msa0871720 | 0.821574 | 3.756258e-53 | -8.615850e-47 |
| Msa0144360 | Msa0871720 | 0.821052 | 4.955600e-53 | -8.615850e-47 |
| Msa0147980 | Msa0871720 | 0.824840 | 6.491371e-54 | -8.615850e-47 |
| Msa0170210 | Msa0871720 | 0.821430 | 4.055468e-53 | -8.615850e-47 |
| Msa0176050 | Msa0871720 | 0.805870 | 1.083388e-49 | -8.615850e-47 |
| Msa0181230 | Msa0871720 | 0.820637 | 6.173600e-53 | -8.615850e-47 |
| Msa0187030 | Msa0871720 | 0.849167 | 3.846857e-60 | -8.615850e-47 |
| Msa0187830 | Msa0871720 | 0.811758 | 5.964081e-51 | -8.615850e-47 |
| Msa0191890 | Msa0871720 | 0.800161 | 1.641006e-48 | -8.615850e-47 |
| Msa0192640 | Msa0871720 | 0.807097 | 5.971015e-50 | -8.615850e-47 |
| Msa0198800 | Msa0871720 | 0.807229 | 5.596119e-50 | -8.615850e-47 |
| Msa0200790 | Msa0871720 | 0.800719 | 1.262913e-48 | -8.615850e-47 |
| Msa0205010 | Msa0871720 | 0.809122 | 2.212024e-50 | -8.615850e-47 |
| Msa0207350 | Msa0871720 | 0.861195 | 1.216477e-63 | -8.615850e-47 |
| Msa0211200 | Msa0871720 | 0.820440 | 6.853124e-53 | -8.615850e-47 |
| Msa0211430 | Msa0871720 | 0.805176 | 1.514435e-49 | -8.615850e-47 |
| Msa0220730 | Msa0871720 | 0.833871 | 4.157766e-56 | -8.615850e-47 |
| Msa0227340 | Msa0871720 | 0.830565 | 2.733641e-55 | -8.615850e-47 |
| Msa0229920 | Msa0871720 | 0.809792 | 1.588181e-50 | -8.615850e-47 |
| Msa0230150 | Msa0871720 | 0.814277 | 1.671984e-51 | -8.615850e-47 |
| Msa0230370 | Msa0871720 | 0.811932 | 5.466074e-51 | -8.615850e-47 |
| Msa0231190 | Msa0871720 | 0.812148 | 4.905182e-51 | -8.615850e-47 |
| Msa0237210 | Msa0871720 | 0.838429 | 2.891625e-57 | -8.615850e-47 |
| Msa0369230 | Msa0871720 | 0.804635 | 1.965130e-49 | -8.615850e-47 |
| Msa0378720 | Msa0871720 | 0.801823 | 7.507785e-49 | -8.615850e-47 |
| Msa0379610 | Msa0871720 | 0.804419 | 2.180004e-49 | -8.615850e-47 |
| Msa0382370 | Msa0871720 | 0.822995 | 1.757300e-53 | -8.615850e-47 |
| Msa0382490 | Msa0871720 | 0.819454 | 1.151790e-52 | -8.615850e-47 |
| Msa0403640 | Msa0871720 | 0.800213 | 1.601878e-48 | -8.615850e-47 |
| Msa0403660 | Msa0871720 | 0.819000 | 1.461175e-52 | -8.615850e-47 |
| Msa0432160 | Msa0871720 | 0.836829 | 7.438942e-57 | -8.615850e-47 |
| Msa0432670 | Msa0871720 | 0.826145 | 3.186254e-54 | -8.615850e-47 |
| Msa0435370 | Msa0871720 | 0.803394 | 3.560695e-49 | -8.615850e-47 |
| Msa0435420 | Msa0871720 | 0.802230 | 6.192390e-49 | -8.615850e-47 |
| Msa0450400 | Msa0871720 | -0.832071 | 1.164994e-55 | -8.615850e-47 |
| Msa0467100 | Msa0871720 | 0.838135 | 3.442356e-57 | -8.615850e-47 |
| Msa0468250 | Msa0871720 | 0.803838 | 2.879169e-49 | -8.615850e-47 |
| Msa0468410 | Msa0871720 | 0.804901 | 1.728833e-49 | -8.615850e-47 |
| Msa0476680 | Msa0871720 | 0.838004 | 3.718922e-57 | -8.615850e-47 |
| Msa0479200 | Msa0871720 | 0.822897 | 1.852881e-53 | -8.615850e-47 |
| Msa0481970 | Msa0871720 | 0.814928 | 1.199760e-51 | -8.615850e-47 |
| Msa0240900 | Msa0871720 | 0.816396 | 5.652302e-52 | -8.615850e-47 |
| Msa0241830 | Msa0871720 | 0.818166 | 2.259197e-52 | -8.615850e-47 |
| Msa0258690 | Msa0871720 | 0.813848 | 2.078919e-51 | -8.615850e-47 |
| Msa0264830 | Msa0871720 | 0.830748 | 2.465224e-55 | -8.615850e-47 |
| Msa0274980 | Msa0871720 | 0.814763 | 1.305693e-51 | -8.615850e-47 |
| Msa0279850 | Msa0871720 | 0.850991 | 1.186753e-60 | -8.615850e-47 |
| Msa0298410 | Msa0871720 | 0.832502 | 9.115859e-56 | -8.615850e-47 |
| Msa0300270 | Msa0871720 | 0.805295 | 1.430220e-49 | -8.615850e-47 |
| Msa0300320 | Msa0871720 | 0.821099 | 4.834611e-53 | -8.615850e-47 |
| Msa0302870 | Msa0871720 | 0.827548 | 1.472530e-54 | -8.615850e-47 |
| Msa0307570 | Msa0871720 | 0.815921 | 7.214405e-52 | -8.615850e-47 |
| Msa0312530 | Msa0871720 | 0.806946 | 6.424847e-50 | -8.615850e-47 |
| Msa0315690 | Msa0871720 | 0.839232 | 1.791748e-57 | -8.615850e-47 |
| Msa0317970 | Msa0871720 | 0.844894 | 5.698325e-59 | -8.615850e-47 |
| Msa0322900 | Msa0871720 | 0.856032 | 4.230932e-62 | -8.615850e-47 |
| Msa0340340 | Msa0871720 | 0.828693 | 7.802994e-55 | -8.615850e-47 |
| Msa0341690 | Msa0871720 | 0.818044 | 2.407079e-52 | -8.615850e-47 |
| Msa0342010 | Msa0871720 | 0.820501 | 6.634570e-53 | -8.615850e-47 |
| Msa0358400 | Msa0871720 | 0.803840 | 2.877405e-49 | -8.615850e-47 |
| Msa0485240 | Msa0871720 | 0.868785 | 5.041703e-66 | -8.615850e-47 |
| Msa0518030 | Msa0871720 | 0.846997 | 1.527679e-59 | -8.615850e-47 |
| Msa0521010 | Msa0871720 | 0.835676 | 1.461185e-56 | -8.615850e-47 |
| Msa0527190 | Msa0871720 | 0.840035 | 1.108150e-57 | -8.615850e-47 |
| Msa0527820 | Msa0871720 | 0.818006 | 2.454871e-52 | -8.615850e-47 |
| Msa0534400 | Msa0871720 | 0.810248 | 1.266569e-50 | -8.615850e-47 |
| Msa0553200 | Msa0871720 | 0.808772 | 2.628286e-50 | -8.615850e-47 |
| Msa0556010 | Msa0871720 | 0.838379 | 2.978748e-57 | -8.615850e-47 |
| Msa0565170 | Msa0871720 | 0.845737 | 3.369241e-59 | -8.615850e-47 |
| Msa0579660 | Msa0871720 | 0.849099 | 4.017205e-60 | -8.615850e-47 |
| Msa0581690 | Msa0871720 | 0.840751 | 7.199102e-58 | -8.615850e-47 |
| Msa0582480 | Msa0871720 | 0.817645 | 2.961575e-52 | -8.615850e-47 |
| Msa0586220 | Msa0871720 | 0.818693 | 1.715657e-52 | -8.615850e-47 |
| Msa0590640 | Msa0871720 | 0.812468 | 4.175391e-51 | -8.615850e-47 |
| Msa0597770 | Msa0871720 | 0.839115 | 1.922103e-57 | -8.615850e-47 |
| Msa0601950 | Msa0871720 | 0.813583 | 2.378740e-51 | -8.615850e-47 |
| Msa0855870 | Msa0871720 | 0.811222 | 7.797275e-51 | -8.615850e-47 |
| Msa0867870 | Msa0871720 | 0.805469 | 1.314854e-49 | -8.615850e-47 |
| Msa0868160 | Msa0871720 | 0.814249 | 1.696478e-51 | -8.615850e-47 |
| Msa0870520 | Msa0871720 | 0.818480 | 1.917333e-52 | -8.615850e-47 |
| Msa0870540 | Msa0871720 | 0.805138 | 1.542702e-49 | -8.615850e-47 |
| Msa0871720 | Msa0901110 | 0.809694 | 1.666838e-50 | -8.615850e-47 |
| Msa0871720 | Msa0903710 | 0.815399 | 9.431295e-52 | -8.615850e-47 |
| Msa0871720 | Msa0903780 | 0.824714 | 6.948499e-54 | -8.615850e-47 |
| Msa0871720 | Msa0910440 | 0.824229 | 9.037585e-54 | -8.615850e-47 |
| Msa0871720 | Msa0934140 | 0.820871 | 5.453692e-53 | -8.615850e-47 |
| Msa0871720 | Msa0936380 | 0.835422 | 1.693463e-56 | -8.615850e-47 |
| Msa0871720 | Msa0937020 | 0.932069 | 1.479101e-94 | -8.615850e-47 |
| Msa0871720 | Msa0948300 | 0.800180 | 1.626566e-48 | -8.615850e-47 |
| Msa0871720 | Msa0960420 | 0.805275 | 1.444427e-49 | -8.615850e-47 |
| Msa0871720 | Msa0965080 | 0.801134 | 1.039187e-48 | -8.615850e-47 |
| Msa0871720 | Msa0965290 | 0.801545 | 8.559470e-49 | -8.615850e-47 |
| Msa0871720 | Msa0971650 | 0.804996 | 1.652001e-49 | -8.615850e-47 |
| Msa0871720 | Msa0973140 | 0.813599 | 2.359537e-51 | -8.615850e-47 |
| Msa0871720 | Msa0974290 | 0.847160 | 1.378890e-59 | -8.615850e-47 |
| Msa0871720 | Msa0979180 | 0.809452 | 1.878746e-50 | -8.615850e-47 |
| Msa0871720 | Msa0984690 | 0.803425 | 3.507603e-49 | -8.615850e-47 |
| Msa0871720 | Msa0984710 | 0.815402 | 9.415415e-52 | -8.615850e-47 |
| Msa0871720 | Msa0999680 | 0.807196 | 5.688022e-50 | -8.615850e-47 |
| Msa0871720 | Msa1000160 | 0.801611 | 8.299056e-49 | -8.615850e-47 |
| Msa0871720 | Msa1000920 | 0.812715 | 3.686857e-51 | -8.615850e-47 |
| Msa0871720 | Msa1006810 | 0.823403 | 1.411361e-53 | -8.615850e-47 |
| Msa0871720 | Msa1012800 | 0.800860 | 1.182363e-48 | -8.615850e-47 |
| Msa0871720 | Msa1022820 | 0.831043 | 2.087892e-55 | -8.615850e-47 |
| Msa0871720 | Msa1027990 | 0.816974 | 4.194059e-52 | -8.615850e-47 |
| Msa0871720 | Msa1028280 | 0.840831 | 6.861911e-58 | -8.615850e-47 |
| Msa0871720 | Msa1034500 | 0.857677 | 1.387150e-62 | -8.615850e-47 |
| Msa0871720 | Msa1038060 | 0.804505 | 2.092155e-49 | -8.615850e-47 |
| Msa0871720 | Msa1038080 | 0.814161 | 1.773353e-51 | -8.615850e-47 |
| Msa0871720 | Msa1044470 | 0.826424 | 2.733682e-54 | -8.615850e-47 |
| Msa0871720 | Msa1061980 | 0.843118 | 1.705111e-58 | -8.615850e-47 |
| Msa0871720 | Msa1076560 | 0.810632 | 1.046854e-50 | -8.615850e-47 |
| Msa0871720 | Msa1079230 | 0.809927 | 1.485577e-50 | -8.615850e-47 |
| Msa0871720 | Msa1085330 | 0.822536 | 2.247627e-53 | -8.615850e-47 |
| Msa0871720 | Msa1089450 | 0.846505 | 2.082497e-59 | -8.615850e-47 |
| Msa0871720 | Msa1111380 | 0.833415 | 5.405369e-56 | -8.615850e-47 |
| Msa0871720 | Msa1131050 | 0.803596 | 3.232599e-49 | -8.615850e-47 |
| Msa0871720 | Msa1145580 | 0.800800 | 1.215677e-48 | -8.615850e-47 |
| Msa0871720 | Msa1145810 | 0.825202 | 5.329425e-54 | -8.615850e-47 |
| Msa0871720 | Msa1162770 | 0.805091 | 1.578358e-49 | -8.615850e-47 |
| Msa0871720 | Msa1189650 | 0.800145 | 1.653707e-48 | -8.615850e-47 |
| Msa0871720 | Msa1204100 | -0.829723 | 4.388061e-55 | -8.615850e-47 |
| Msa0871720 | Msa1208430 | 0.800898 | 1.161406e-48 | -8.615850e-47 |
| Msa0871720 | Msa1211340 | 0.809957 | 1.463259e-50 | -8.615850e-47 |
| Msa0871720 | Msa1219000 | 0.801170 | 1.021865e-48 | -8.615850e-47 |
| Msa0871720 | Msa1219900 | 0.811661 | 6.262313e-51 | -8.615850e-47 |
| Msa0871720 | Msa1225100 | 0.813393 | 2.618542e-51 | -8.615850e-47 |
| Msa0871720 | Msa1234550 | 0.807117 | 5.911636e-50 | -8.615850e-47 |
| Msa0871720 | Msa1238820 | 0.801485 | 8.806182e-49 | -8.615850e-47 |
| Msa0871720 | Msa1243870 | 0.811786 | 5.882943e-51 | -8.615850e-47 |
| Msa0871720 | Msa1252850 | -0.807375 | 5.213420e-50 | -8.615850e-47 |
| Msa0871720 | Msa1259640 | 0.800364 | 1.492439e-48 | -8.615850e-47 |
| Msa0871720 | Msa1262010 | 0.808682 | 2.747017e-50 | -8.615850e-47 |
| Msa0871720 | Msa1265590 | 0.804442 | 2.155999e-49 | -8.615850e-47 |
| Msa0871720 | Msa1266330 | 0.809492 | 1.842254e-50 | -8.615850e-47 |
| Msa0871720 | Msa1266490 | 0.811543 | 6.643100e-51 | -8.615850e-47 |
| Msa0871720 | Msa1269890 | 0.806844 | 6.752457e-50 | -8.615850e-47 |
| Msa0871720 | Msa1275450 | 0.806261 | 8.962940e-50 | -8.615850e-47 |
| Msa0871720 | Msa1277080 | 0.847180 | 1.360831e-59 | -8.615850e-47 |
| Msa0871720 | Msa1283740 | 0.801080 | 1.065865e-48 | -8.615850e-47 |
| Msa0871720 | Msa1285550 | 0.827050 | 1.937804e-54 | -8.615850e-47 |
| Msa0871720 | Msa1297170 | 0.810121 | 1.349162e-50 | -8.615850e-47 |
| Msa0871720 | Msa1303270 | 0.805615 | 1.225707e-49 | -8.615850e-47 |
| Msa0871720 | Msa1303280 | 0.815564 | 8.667898e-52 | -8.615850e-47 |
| Msa0871720 | Msa1307870 | 0.801300 | 9.607245e-49 | -8.615850e-47 |
| Msa0871720 | Msa1319820 | 0.811641 | 6.326021e-51 | -8.615850e-47 |
| Msa0871720 | Msa1323690 | 0.816337 | 5.826628e-52 | -8.615850e-47 |
| Msa0871720 | Msa1325920 | 0.800973 | 1.120686e-48 | -8.615850e-47 |
| Msa0871720 | Msa1328640 | 0.810538 | 1.096743e-50 | -8.615850e-47 |
| Msa0871720 | Msa1329050 | -0.823786 | 1.148198e-53 | -8.615850e-47 |
| Msa0871720 | Msa1329790 | 0.808922 | 2.441175e-50 | -8.615850e-47 |
| Msa0871720 | Msa1329870 | 0.814056 | 1.870743e-51 | -8.615850e-47 |
| Msa0871720 | Msa1335160 | 0.843957 | 1.017869e-58 | -8.615850e-47 |
| Msa0871720 | Msa1341840 | 0.814641 | 1.389349e-51 | -8.615850e-47 |
| Msa0871720 | Msa1345810 | 0.809110 | 2.224559e-50 | -8.615850e-47 |
| Msa0871720 | Msa1348090 | 0.830777 | 2.426309e-55 | -8.615850e-47 |
| Msa0871720 | Msa1353890 | 0.817500 | 3.193008e-52 | -8.615850e-47 |
| Msa0871720 | Msa1355450 | 0.809938 | 1.477333e-50 | -8.615850e-47 |
| Msa0871720 | Msa1369690 | 0.816624 | 5.024968e-52 | -8.615850e-47 |
| Msa0871720 | Msa1371520 | 0.842988 | 1.847191e-58 | -8.615850e-47 |
| Msa0871720 | Msa1373820 | 0.812130 | 4.949585e-51 | -8.615850e-47 |
| Msa0871720 | Msa1393820 | 0.833213 | 6.067022e-56 | -8.615850e-47 |
| Msa0871720 | Msa1403710 | 0.815733 | 7.947294e-52 | -8.615850e-47 |
| Msa0871720 | Msa1405220 | 0.813846 | 2.081206e-51 | -8.615850e-47 |
| Msa0871720 | Msa1409490 | 0.804977 | 1.666780e-49 | -8.615850e-47 |
| Msa0871720 | Msa1410420 | 0.822150 | 2.763424e-53 | -8.615850e-47 |
| Msa0871720 | Msa1418240 | 0.878772 | 2.143304e-69 | -8.615850e-47 |
| Msa0871720 | Msa1420250 | 0.812418 | 4.281732e-51 | -8.615850e-47 |
| Msa0871720 | Msa1424350 | 0.804987 | 1.658802e-49 | -8.615850e-47 |
| Msa0871720 | Msa1425090 | 0.804550 | 2.047383e-49 | -8.615850e-47 |
| Msa0871720 | Msa1427110 | 0.805260 | 1.454751e-49 | -8.615850e-47 |
| Msa0871720 | Msa1446330 | 0.819636 | 1.046658e-52 | -8.615850e-47 |
| Msa0871720 | Msa1446780 | 0.808005 | 3.829686e-50 | -8.615850e-47 |
| Msa0871720 | Msa1447180 | 0.812473 | 4.164633e-51 | -8.615850e-47 |
| Msa0871720 | Msa1449860 | 0.809999 | 1.433221e-50 | -8.615850e-47 |
| Msa0871720 | Msa1453360 | 0.845089 | 5.048351e-59 | -8.615850e-47 |
| Msa0871720 | Msa1454530 | 0.824426 | 8.123728e-54 | -8.615850e-47 |
| Msa0871720 | Msa1456230 | 0.816795 | 4.600444e-52 | -8.615850e-47 |
| Msa0871720 | Msa1458340 | 0.833317 | 5.716039e-56 | -8.615850e-47 |
| Msa0871720 | Msa1459100 | 0.814809 | 1.275310e-51 | -8.615850e-47 |
| Msa0871720 | Msa1461370 | 0.807912 | 4.009319e-50 | -8.615850e-47 |
| Msa0871720 | Msa1461540 | 0.832014 | 1.203685e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0871720 | MtrunA17_Chr6g0453031 | 94.145 | 427 | 22 | 1 | 1 | 427 | 1 | 424 | 0.0 | 827 |
| Msa0871720 | MtrunA17_Chr7g0217121 | 51.789 | 475 | 139 | 15 | 1 | 427 | 1 | 433 | 4.96e-130 | 382 |
| Msa0871720 | MtrunA17_Chr3g0089011 | 88.387 | 155 | 18 | 0 | 273 | 427 | 1 | 155 | 4.85e-84 | 254 |
| Msa0871720 | MtrunA17_Chr5g0412021 | 87.379 | 103 | 13 | 0 | 302 | 404 | 1 | 103 | 6.27e-55 | 177 |
| Msa0871720 | MtrunA17_Chr7g0248731 | 73.016 | 126 | 20 | 2 | 302 | 427 | 1 | 112 | 1.01e-52 | 172 |
| Msa0871720 | MtrunA17_Chr1g0171871 | 30.752 | 452 | 199 | 15 | 1 | 426 | 1 | 364 | 4.16e-45 | 160 |
| Msa0871720 | MtrunA17_Chr7g0256501 | 29.688 | 448 | 211 | 14 | 15 | 426 | 46 | 425 | 4.59e-44 | 159 |
| Msa0871720 | MtrunA17_Chr3g0105871 | 45.455 | 165 | 71 | 3 | 261 | 425 | 87 | 232 | 1.12e-36 | 134 |
| Msa0871720 | MtrunA17_Chr5g0437471 | 43.636 | 165 | 73 | 4 | 263 | 427 | 96 | 240 | 2.36e-36 | 133 |
| Msa0871720 | MtrunA17_Chr8g0352771 | 45.181 | 166 | 76 | 4 | 262 | 427 | 106 | 256 | 2.20e-35 | 131 |
| Msa0871720 | MtrunA17_Chr3g0083531 | 41.618 | 173 | 81 | 5 | 253 | 425 | 108 | 260 | 2.29e-35 | 132 |
| Msa0871720 | MtrunA17_Chr7g0266401 | 43.558 | 163 | 72 | 3 | 264 | 426 | 263 | 405 | 2.81e-33 | 129 |
| Msa0871720 | MtrunA17_Chr5g0431071 | 41.317 | 167 | 74 | 4 | 261 | 425 | 109 | 253 | 1.03e-32 | 124 |
| Msa0871720 | MtrunA17_Chr3g0113971 | 37.306 | 193 | 99 | 5 | 237 | 427 | 64 | 236 | 1.79e-32 | 123 |
| Msa0871720 | MtrunA17_Chr7g0267591 | 39.877 | 163 | 87 | 4 | 264 | 426 | 128 | 279 | 4.73e-30 | 117 |
| Msa0871720 | MtrunA17_Chr1g0196971 | 36.073 | 219 | 110 | 7 | 216 | 425 | 171 | 368 | 1.41e-28 | 115 |
| Msa0871720 | MtrunA17_Chr8g0388481 | 39.881 | 168 | 82 | 5 | 262 | 425 | 215 | 367 | 1.89e-27 | 112 |
| Msa0871720 | MtrunA17_Chr8g0392761 | 41.279 | 172 | 88 | 4 | 254 | 425 | 115 | 273 | 3.72e-25 | 103 |
| Msa0871720 | MtrunA17_Chr4g0060701 | 64.179 | 67 | 23 | 1 | 339 | 404 | 18 | 84 | 1.49e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0871720 | AT5G39865.1 | 47.368 | 437 | 171 | 15 | 1 | 426 | 1 | 389 | 5.27e-114 | 340 |
| Msa0871720 | AT3G28850.1 | 46.970 | 462 | 174 | 16 | 1 | 426 | 1 | 427 | 7.40e-97 | 297 |
| Msa0871720 | AT2G41330.1 | 31.739 | 460 | 180 | 16 | 15 | 427 | 30 | 402 | 1.21e-51 | 179 |
| Msa0871720 | AT3G57070.1 | 32.751 | 458 | 182 | 18 | 20 | 427 | 36 | 417 | 3.51e-49 | 172 |
| Msa0871720 | AT5G58530.1 | 39.560 | 182 | 87 | 3 | 252 | 427 | 103 | 267 | 1.54e-37 | 138 |
| Msa0871720 | AT5G13810.1 | 38.725 | 204 | 105 | 5 | 224 | 425 | 87 | 272 | 7.40e-36 | 133 |
| Msa0871720 | AT1G64500.1 | 40.606 | 165 | 86 | 4 | 262 | 425 | 212 | 365 | 1.17e-32 | 127 |
| Msa0871720 | AT5G06470.1 | 40.000 | 165 | 85 | 3 | 261 | 425 | 88 | 238 | 5.32e-29 | 114 |
| Msa0871720 | AT4G10630.1 | 32.215 | 298 | 151 | 11 | 136 | 425 | 79 | 333 | 1.44e-28 | 115 |
| Msa0871720 | AT5G03870.1 | 28.205 | 429 | 204 | 15 | 35 | 425 | 21 | 383 | 6.92e-27 | 111 |
| Msa0871720 | AT1G32760.1 | 33.553 | 304 | 135 | 11 | 122 | 425 | 77 | 313 | 1.04e-26 | 109 |
| Msa0871720 | AT3G11773.1 | 36.875 | 160 | 80 | 3 | 266 | 425 | 11 | 149 | 2.09e-24 | 99.0 |
| Msa0871720 | AT5G01420.1 | 32.727 | 165 | 92 | 3 | 261 | 425 | 255 | 400 | 4.27e-18 | 86.3 |
| Msa0871720 | AT3G11773.2 | 25.692 | 253 | 115 | 7 | 177 | 425 | 16 | 199 | 4.48e-16 | 77.0 |
Find 76 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATTCTTGGCAATAGATTT+TGG | 0.171501 | 6_1:+6779462 | None:intergenic |
| ATCAACAACATTAGGTTCTT+TGG | 0.176849 | 6_1:-6779685 | Msa0871720:CDS |
| GAGAAGCTTCTTACTTGATT+TGG | 0.223842 | 6_1:+6779357 | None:intergenic |
| GGATTACCAAAGGTCTTTAT+TGG | 0.262282 | 6_1:-6778856 | Msa0871720:CDS |
| AGAGATGTGTCAATGCATTT+AGG | 0.289518 | 6_1:-6778931 | Msa0871720:CDS |
| TGTCCTCATTGCAATGAAAA+TGG | 0.298206 | 6_1:-6778592 | Msa0871720:CDS |
| CTTCTAGAGACAGAGCAATA+AGG | 0.309913 | 6_1:+6779774 | None:intergenic |
| ATGAGGATTGTTGCAAAGTT+AGG | 0.312147 | 6_1:-6778990 | Msa0871720:CDS |
| TTCTAGAGACAGAGCAATAA+GGG | 0.325660 | 6_1:+6779775 | None:intergenic |
| CCCTCTTGCTTCTCTTGCAA+TGG | 0.331746 | 6_1:+6779147 | None:intergenic |
| TGGTGTTGTGATTTGATTCT+TGG | 0.347946 | 6_1:+6779449 | None:intergenic |
| CATCAACACATGGGAACTAA+TGG | 0.354432 | 6_1:-6779412 | Msa0871720:CDS |
| CATTGCAATGAGGACACCTT+TGG | 0.363064 | 6_1:+6778599 | None:intergenic |
| TCCACAAAAGACTAGTTTCA+TGG | 0.366065 | 6_1:-6779304 | Msa0871720:CDS |
| ACCTCAGAAAAGCAGTCTAA+TGG | 0.373912 | 6_1:-6779597 | Msa0871720:CDS |
| GCATTGACATCAACAACATT+AGG | 0.382700 | 6_1:-6779693 | Msa0871720:CDS |
| TTCCTTCCAATAAAGACCTT+TGG | 0.389330 | 6_1:+6778850 | None:intergenic |
| GCTTTGAGCAGAGTTGAATA+TGG | 0.429778 | 6_1:+6779627 | None:intergenic |
| TTGTGTGAGTTCCAAGCAAA+AGG | 0.433319 | 6_1:-6779817 | Msa0871720:CDS |
| TGATTTACACAAACCAAAGT+TGG | 0.433774 | 6_1:-6779265 | Msa0871720:CDS |
| TTACTTAGTGAAGGGAACTA+TGG | 0.443250 | 6_1:-6778886 | Msa0871720:CDS |
| ACTTGATTTGGTGATTGAAA+AGG | 0.446353 | 6_1:+6779369 | None:intergenic |
| AATGGATTTGAGGTCGGAAA+AGG | 0.457205 | 6_1:-6779579 | Msa0871720:CDS |
| ATAATCATATGATCCAACTT+TGG | 0.462563 | 6_1:+6779252 | None:intergenic |
| CAAAGAAGAGGTTGAAAATG+AGG | 0.464026 | 6_1:-6779520 | Msa0871720:CDS |
| GATTGTGAGGTTGGTGAGTG+TGG | 0.464732 | 6_1:-6778625 | Msa0871720:CDS |
| TTTGAAAGGATTGGGCATAA+GGG | 0.468130 | 6_1:-6778962 | Msa0871720:CDS |
| GAAGATGATGATTGTGAGGT+TGG | 0.472290 | 6_1:-6778634 | Msa0871720:CDS |
| TAGTGAGAATTTCAAAGAAG+AGG | 0.480365 | 6_1:-6779532 | Msa0871720:CDS |
| TACCAAAGGTCTTTATTGGA+AGG | 0.497940 | 6_1:-6778852 | Msa0871720:CDS |
| CTCAAAGAGTTACTTAGTGA+AGG | 0.498994 | 6_1:-6778895 | Msa0871720:CDS |
| GTTGGATCATATGATTATTG+AGG | 0.501173 | 6_1:-6779247 | Msa0871720:CDS |
| AAAGCAGTCTAATGGATTTG+AGG | 0.513273 | 6_1:-6779589 | Msa0871720:CDS |
| GATTGCCACTTATGAGAAGA+AGG | 0.514269 | 6_1:-6779061 | Msa0871720:CDS |
| ATTCTCACTAACCTTACCAT+TGG | 0.518981 | 6_1:+6779545 | None:intergenic |
| GCAAGAGAAGCAAGAGGGGA+TGG | 0.520846 | 6_1:-6779142 | Msa0871720:CDS |
| GACATTGAAGGAGGTGATGG+TGG | 0.521306 | 6_1:-6778742 | Msa0871720:CDS |
| AGTTGTAAAATCTACTATGA+AGG | 0.542921 | 6_1:-6778667 | Msa0871720:CDS |
| GAAAGGATTGATGACATTGA+AGG | 0.550438 | 6_1:-6778754 | Msa0871720:CDS |
| GAAATACATTGGTGGAGTTG+AGG | 0.554005 | 6_1:-6778830 | Msa0871720:CDS |
| AGTGAAGGGAACTATGGTAA+AGG | 0.556776 | 6_1:-6778880 | Msa0871720:CDS |
| TTTATTGGAAGGAAATACAT+TGG | 0.560125 | 6_1:-6778841 | Msa0871720:CDS |
| GAACTTGTATCTCAAAGTCA+AGG | 0.563359 | 6_1:-6779663 | Msa0871720:CDS |
| AATTGCTTGATTGTTGTGAA+AGG | 0.563544 | 6_1:-6778771 | Msa0871720:CDS |
| GACATGGTCTAATATGATTG+AGG | 0.564318 | 6_1:-6779493 | Msa0871720:CDS |
| AGTTTCATGGAGAATGATGA+TGG | 0.566951 | 6_1:-6779291 | Msa0871720:CDS |
| GAAGGGAACTATGGTAAAGG+AGG | 0.573000 | 6_1:-6778877 | Msa0871720:CDS |
| GTATCTCAAAGTCAAGGCAA+TGG | 0.579991 | 6_1:-6779657 | Msa0871720:CDS |
| CATTGCAAGAGAAGCAAGAG+GGG | 0.583235 | 6_1:-6779146 | Msa0871720:CDS |
| TCAAAGAGTTACTTAGTGAA+GGG | 0.588614 | 6_1:-6778894 | Msa0871720:CDS |
| AATCACAACACCACCTTGTG+AGG | 0.588710 | 6_1:-6779439 | Msa0871720:CDS |
| TGTGTGAGTTCCAAGCAAAA+GGG | 0.588882 | 6_1:-6779816 | Msa0871720:CDS |
| CTTCCATAGCATGTTTCACA+AGG | 0.589883 | 6_1:+6778688 | None:intergenic |
| CAGTCTAATGGATTTGAGGT+CGG | 0.593557 | 6_1:-6779585 | Msa0871720:CDS |
| ATTGGAAGGAAATACATTGG+TGG | 0.594677 | 6_1:-6778838 | Msa0871720:CDS |
| TTGAAAATGAGGCAAAGACA+TGG | 0.606871 | 6_1:-6779509 | Msa0871720:CDS |
| GTTCCTTGTGAAACATGCTA+TGG | 0.609208 | 6_1:-6778691 | Msa0871720:CDS |
| GATGGTGGATGTGAGGCTTG+TGG | 0.611737 | 6_1:-6778727 | Msa0871720:CDS |
| GATGACATTGAAGGAGGTGA+TGG | 0.620042 | 6_1:-6778745 | Msa0871720:CDS |
| CCATTGCAAGAGAAGCAAGA+GGG | 0.622568 | 6_1:-6779147 | Msa0871720:CDS |
| GTGAGGACATCATCAACACA+TGG | 0.623721 | 6_1:-6779422 | Msa0871720:CDS |
| GATCATATGATTATTGAGGA+CGG | 0.631472 | 6_1:-6779243 | Msa0871720:CDS |
| AGGAGGTGATGGTGGATGTG+AGG | 0.631666 | 6_1:-6778734 | Msa0871720:CDS |
| CATCATCCACCTCAAAACAA+AGG | 0.648374 | 6_1:-6779735 | Msa0871720:CDS |
| AACACATGGGAACTAATGGA+AGG | 0.650905 | 6_1:-6779408 | Msa0871720:CDS |
| GCCATTGCAAGAGAAGCAAG+AGG | 0.651463 | 6_1:-6779148 | Msa0871720:CDS |
| TCTAGAGACAGAGCAATAAG+GGG | 0.653504 | 6_1:+6779776 | None:intergenic |
| AGGATTGATGACATTGAAGG+AGG | 0.665821 | 6_1:-6778751 | Msa0871720:CDS |
| TGAAGAAGATGATGATTGTG+AGG | 0.670498 | 6_1:-6778638 | Msa0871720:CDS |
| TGGTAAAGGAGGATTACCAA+AGG | 0.688045 | 6_1:-6778866 | Msa0871720:CDS |
| ATATTCAACTCTGCTCAAAG+CGG | 0.696374 | 6_1:-6779625 | Msa0871720:CDS |
| GTGTTGATGATGTCCTCACA+AGG | 0.697785 | 6_1:+6779426 | None:intergenic |
| TGAGGACATCATCAACACAT+GGG | 0.714205 | 6_1:-6779421 | Msa0871720:CDS |
| TTGATGATGTCCTCACAAGG+TGG | 0.717699 | 6_1:+6779429 | None:intergenic |
| TATGAACTAGAAACAACACA+TGG | 0.724959 | 6_1:+6778555 | None:intergenic |
| TTGGTGAGTGTGGATTCCAA+AGG | 0.730787 | 6_1:-6778615 | Msa0871720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGGTTTCATATTTTCCAA+TGG | - | chr6_1:6778822-6778841 | Msa0871720:CDS | 25.0% |
| !! | TTTCATATTTTCCAATGGTA+AGG | - | chr6_1:6778827-6778846 | Msa0871720:CDS | 25.0% |
| !! | TCTTTTGATGTTAATGTCAA+TGG | - | chr6_1:6779047-6779066 | Msa0871720:CDS | 25.0% |
| ! | ATAATCATATGATCCAACTT+TGG | + | chr6_1:6779134-6779153 | None:intergenic | 25.0% |
| !! | AAAGTTAGGATGATTTTGAA+AGG | - | chr6_1:6779407-6779426 | Msa0871720:CDS | 25.0% |
| ! | TTTATTGGAAGGAAATACAT+TGG | - | chr6_1:6779542-6779561 | Msa0871720:CDS | 25.0% |
| ! | AGTTGTAAAATCTACTATGA+AGG | - | chr6_1:6779716-6779735 | Msa0871720:CDS | 25.0% |
| !! | AAAGGTTTCATATTTTCCAA+TGG | - | chr6_1:6778822-6778841 | Msa0871720:CDS | 25.0% |
| !! | TTTCATATTTTCCAATGGTA+AGG | - | chr6_1:6778827-6778846 | Msa0871720:CDS | 25.0% |
| !! | TCTTTTGATGTTAATGTCAA+TGG | - | chr6_1:6779047-6779066 | Msa0871720:CDS | 25.0% |
| ! | ATAATCATATGATCCAACTT+TGG | + | chr6_1:6779134-6779153 | None:intergenic | 25.0% |
| !! | AAAGTTAGGATGATTTTGAA+AGG | - | chr6_1:6779407-6779426 | Msa0871720:CDS | 25.0% |
| ! | TTTATTGGAAGGAAATACAT+TGG | - | chr6_1:6779542-6779561 | Msa0871720:CDS | 25.0% |
| ! | AGTTGTAAAATCTACTATGA+AGG | - | chr6_1:6779716-6779735 | Msa0871720:CDS | 25.0% |
| !!! | TAACTATCTCCTTTGTTTTG+AGG | + | chr6_1:6778660-6778679 | None:intergenic | 30.0% |
| ATCAACAACATTAGGTTCTT+TGG | - | chr6_1:6778698-6778717 | Msa0871720:CDS | 30.0% | |
| TAGTGAGAATTTCAAAGAAG+AGG | - | chr6_1:6778851-6778870 | Msa0871720:CDS | 30.0% | |
| ! | TGATTCTTGGCAATAGATTT+TGG | + | chr6_1:6778924-6778943 | None:intergenic | 30.0% |
| !! | ACTTGATTTGGTGATTGAAA+AGG | + | chr6_1:6779017-6779036 | None:intergenic | 30.0% |
| TGATTTACACAAACCAAAGT+TGG | - | chr6_1:6779118-6779137 | Msa0871720:CDS | 30.0% | |
| GTTGGATCATATGATTATTG+AGG | - | chr6_1:6779136-6779155 | Msa0871720:CDS | 30.0% | |
| GATCATATGATTATTGAGGA+CGG | - | chr6_1:6779140-6779159 | Msa0871720:CDS | 30.0% | |
| !! | AGATTTTGATGATTGCAAAG+TGG | - | chr6_1:6779196-6779215 | Msa0871720:CDS | 30.0% |
| ! | GACAAAAAGATTCTCTTTTG+AGG | - | chr6_1:6779265-6779284 | Msa0871720:CDS | 30.0% |
| ! | TTTTTCCTTCTTCTCATAAG+TGG | + | chr6_1:6779330-6779349 | None:intergenic | 30.0% |
| TATGGTGAGAAAAACTTATG+AGG | - | chr6_1:6779376-6779395 | Msa0871720:CDS | 30.0% | |
| !! | TAGGATGATTTTGAAAGGAT+TGG | - | chr6_1:6779412-6779431 | Msa0871720:CDS | 30.0% |
| !! | AGGATGATTTTGAAAGGATT+GGG | - | chr6_1:6779413-6779432 | Msa0871720:CDS | 30.0% |
| TCAAAGAGTTACTTAGTGAA+GGG | - | chr6_1:6779489-6779508 | Msa0871720:CDS | 30.0% | |
| AATTGCTTGATTGTTGTGAA+AGG | - | chr6_1:6779612-6779631 | Msa0871720:CDS | 30.0% | |
| !!! | TAACTATCTCCTTTGTTTTG+AGG | + | chr6_1:6778660-6778679 | None:intergenic | 30.0% |
| ATCAACAACATTAGGTTCTT+TGG | - | chr6_1:6778698-6778717 | Msa0871720:CDS | 30.0% | |
| TAGTGAGAATTTCAAAGAAG+AGG | - | chr6_1:6778851-6778870 | Msa0871720:CDS | 30.0% | |
| ! | TGATTCTTGGCAATAGATTT+TGG | + | chr6_1:6778924-6778943 | None:intergenic | 30.0% |
| !! | ACTTGATTTGGTGATTGAAA+AGG | + | chr6_1:6779017-6779036 | None:intergenic | 30.0% |
| TGATTTACACAAACCAAAGT+TGG | - | chr6_1:6779118-6779137 | Msa0871720:CDS | 30.0% | |
| GTTGGATCATATGATTATTG+AGG | - | chr6_1:6779136-6779155 | Msa0871720:CDS | 30.0% | |
| GATCATATGATTATTGAGGA+CGG | - | chr6_1:6779140-6779159 | Msa0871720:CDS | 30.0% | |
| !! | AGATTTTGATGATTGCAAAG+TGG | - | chr6_1:6779196-6779215 | Msa0871720:CDS | 30.0% |
| ! | GACAAAAAGATTCTCTTTTG+AGG | - | chr6_1:6779265-6779284 | Msa0871720:CDS | 30.0% |
| ! | TTTTTCCTTCTTCTCATAAG+TGG | + | chr6_1:6779330-6779349 | None:intergenic | 30.0% |
| TATGGTGAGAAAAACTTATG+AGG | - | chr6_1:6779376-6779395 | Msa0871720:CDS | 30.0% | |
| !! | TAGGATGATTTTGAAAGGAT+TGG | - | chr6_1:6779412-6779431 | Msa0871720:CDS | 30.0% |
| !! | AGGATGATTTTGAAAGGATT+GGG | - | chr6_1:6779413-6779432 | Msa0871720:CDS | 30.0% |
| TCAAAGAGTTACTTAGTGAA+GGG | - | chr6_1:6779489-6779508 | Msa0871720:CDS | 30.0% | |
| AATTGCTTGATTGTTGTGAA+AGG | - | chr6_1:6779612-6779631 | Msa0871720:CDS | 30.0% | |
| ! | ATGACAATATCCCTTTTGCT+TGG | + | chr6_1:6778580-6778599 | None:intergenic | 35.0% |
| ! | TTCTAGAGACAGAGCAATAA+GGG | + | chr6_1:6778611-6778630 | None:intergenic | 35.0% |
| ! | GCATTGACATCAACAACATT+AGG | - | chr6_1:6778690-6778709 | Msa0871720:CDS | 35.0% |
| GAACTTGTATCTCAAAGTCA+AGG | - | chr6_1:6778720-6778739 | Msa0871720:CDS | 35.0% | |
| ATATTCAACTCTGCTCAAAG+CGG | - | chr6_1:6778758-6778777 | Msa0871720:CDS | 35.0% | |
| !! | AAAGCAGTCTAATGGATTTG+AGG | - | chr6_1:6778794-6778813 | Msa0871720:CDS | 35.0% |
| ATTCTCACTAACCTTACCAT+TGG | + | chr6_1:6778841-6778860 | None:intergenic | 35.0% | |
| CAAAGAAGAGGTTGAAAATG+AGG | - | chr6_1:6778863-6778882 | Msa0871720:CDS | 35.0% | |
| TTGAAAATGAGGCAAAGACA+TGG | - | chr6_1:6778874-6778893 | Msa0871720:CDS | 35.0% | |
| GACATGGTCTAATATGATTG+AGG | - | chr6_1:6778890-6778909 | Msa0871720:CDS | 35.0% | |
| !! | TGGTGTTGTGATTTGATTCT+TGG | + | chr6_1:6778937-6778956 | None:intergenic | 35.0% |
| GAGAAGCTTCTTACTTGATT+TGG | + | chr6_1:6779029-6779048 | None:intergenic | 35.0% | |
| ! | TAGTCTTTTGTGGATCAACA+TGG | + | chr6_1:6779073-6779092 | None:intergenic | 35.0% |
| !! | TCCACAAAAGACTAGTTTCA+TGG | - | chr6_1:6779079-6779098 | Msa0871720:CDS | 35.0% |
| !!! | TCCATGAAACTAGTCTTTTG+TGG | + | chr6_1:6779083-6779102 | None:intergenic | 35.0% |
| AGTTTCATGGAGAATGATGA+TGG | - | chr6_1:6779092-6779111 | Msa0871720:CDS | 35.0% | |
| ! | GTATTTTACAAGCCTACGTA+TGG | - | chr6_1:6779358-6779377 | Msa0871720:CDS | 35.0% |
| ! | AAGTTTTTCTCACCATACGT+AGG | + | chr6_1:6779373-6779392 | None:intergenic | 35.0% |
| ATGAGGATTGTTGCAAAGTT+AGG | - | chr6_1:6779393-6779412 | Msa0871720:CDS | 35.0% | |
| !! | TTTTGAAAGGATTGGGCATA+AGG | - | chr6_1:6779420-6779439 | Msa0871720:CDS | 35.0% |
| TTTGAAAGGATTGGGCATAA+GGG | - | chr6_1:6779421-6779440 | Msa0871720:CDS | 35.0% | |
| AGAGATGTGTCAATGCATTT+AGG | - | chr6_1:6779452-6779471 | Msa0871720:CDS | 35.0% | |
| CTCAAAGAGTTACTTAGTGA+AGG | - | chr6_1:6779488-6779507 | Msa0871720:CDS | 35.0% | |
| TTACTTAGTGAAGGGAACTA+TGG | - | chr6_1:6779497-6779516 | Msa0871720:CDS | 35.0% | |
| GGATTACCAAAGGTCTTTAT+TGG | - | chr6_1:6779527-6779546 | Msa0871720:CDS | 35.0% | |
| TACCAAAGGTCTTTATTGGA+AGG | - | chr6_1:6779531-6779550 | Msa0871720:CDS | 35.0% | |
| TTCCTTCCAATAAAGACCTT+TGG | + | chr6_1:6779536-6779555 | None:intergenic | 35.0% | |
| ATTGGAAGGAAATACATTGG+TGG | - | chr6_1:6779545-6779564 | Msa0871720:CDS | 35.0% | |
| ! | GAAAGGATTGATGACATTGA+AGG | - | chr6_1:6779629-6779648 | Msa0871720:CDS | 35.0% |
| TGAAGAAGATGATGATTGTG+AGG | - | chr6_1:6779745-6779764 | Msa0871720:CDS | 35.0% | |
| TGTCCTCATTGCAATGAAAA+TGG | - | chr6_1:6779791-6779810 | Msa0871720:CDS | 35.0% | |
| ! | AGTCCATTTTCATTGCAATG+AGG | + | chr6_1:6779797-6779816 | None:intergenic | 35.0% |
| ! | ATGACAATATCCCTTTTGCT+TGG | + | chr6_1:6778580-6778599 | None:intergenic | 35.0% |
| ! | TTCTAGAGACAGAGCAATAA+GGG | + | chr6_1:6778611-6778630 | None:intergenic | 35.0% |
| ! | GCATTGACATCAACAACATT+AGG | - | chr6_1:6778690-6778709 | Msa0871720:CDS | 35.0% |
| GAACTTGTATCTCAAAGTCA+AGG | - | chr6_1:6778720-6778739 | Msa0871720:CDS | 35.0% | |
| ATATTCAACTCTGCTCAAAG+CGG | - | chr6_1:6778758-6778777 | Msa0871720:CDS | 35.0% | |
| !! | AAAGCAGTCTAATGGATTTG+AGG | - | chr6_1:6778794-6778813 | Msa0871720:CDS | 35.0% |
| ATTCTCACTAACCTTACCAT+TGG | + | chr6_1:6778841-6778860 | None:intergenic | 35.0% | |
| CAAAGAAGAGGTTGAAAATG+AGG | - | chr6_1:6778863-6778882 | Msa0871720:CDS | 35.0% | |
| TTGAAAATGAGGCAAAGACA+TGG | - | chr6_1:6778874-6778893 | Msa0871720:CDS | 35.0% | |
| GACATGGTCTAATATGATTG+AGG | - | chr6_1:6778890-6778909 | Msa0871720:CDS | 35.0% | |
| !! | TGGTGTTGTGATTTGATTCT+TGG | + | chr6_1:6778937-6778956 | None:intergenic | 35.0% |
| GAGAAGCTTCTTACTTGATT+TGG | + | chr6_1:6779029-6779048 | None:intergenic | 35.0% | |
| ! | TAGTCTTTTGTGGATCAACA+TGG | + | chr6_1:6779073-6779092 | None:intergenic | 35.0% |
| !! | TCCACAAAAGACTAGTTTCA+TGG | - | chr6_1:6779079-6779098 | Msa0871720:CDS | 35.0% |
| !!! | TCCATGAAACTAGTCTTTTG+TGG | + | chr6_1:6779083-6779102 | None:intergenic | 35.0% |
| AGTTTCATGGAGAATGATGA+TGG | - | chr6_1:6779092-6779111 | Msa0871720:CDS | 35.0% | |
| ! | GTATTTTACAAGCCTACGTA+TGG | - | chr6_1:6779358-6779377 | Msa0871720:CDS | 35.0% |
| ! | AAGTTTTTCTCACCATACGT+AGG | + | chr6_1:6779373-6779392 | None:intergenic | 35.0% |
| ATGAGGATTGTTGCAAAGTT+AGG | - | chr6_1:6779393-6779412 | Msa0871720:CDS | 35.0% | |
| !! | TTTTGAAAGGATTGGGCATA+AGG | - | chr6_1:6779420-6779439 | Msa0871720:CDS | 35.0% |
| TTTGAAAGGATTGGGCATAA+GGG | - | chr6_1:6779421-6779440 | Msa0871720:CDS | 35.0% | |
| AGAGATGTGTCAATGCATTT+AGG | - | chr6_1:6779452-6779471 | Msa0871720:CDS | 35.0% | |
| CTCAAAGAGTTACTTAGTGA+AGG | - | chr6_1:6779488-6779507 | Msa0871720:CDS | 35.0% | |
| TTACTTAGTGAAGGGAACTA+TGG | - | chr6_1:6779497-6779516 | Msa0871720:CDS | 35.0% | |
| GGATTACCAAAGGTCTTTAT+TGG | - | chr6_1:6779527-6779546 | Msa0871720:CDS | 35.0% | |
| TACCAAAGGTCTTTATTGGA+AGG | - | chr6_1:6779531-6779550 | Msa0871720:CDS | 35.0% | |
| TTCCTTCCAATAAAGACCTT+TGG | + | chr6_1:6779536-6779555 | None:intergenic | 35.0% | |
| ATTGGAAGGAAATACATTGG+TGG | - | chr6_1:6779545-6779564 | Msa0871720:CDS | 35.0% | |
| ! | GAAAGGATTGATGACATTGA+AGG | - | chr6_1:6779629-6779648 | Msa0871720:CDS | 35.0% |
| TGAAGAAGATGATGATTGTG+AGG | - | chr6_1:6779745-6779764 | Msa0871720:CDS | 35.0% | |
| TGTCCTCATTGCAATGAAAA+TGG | - | chr6_1:6779791-6779810 | Msa0871720:CDS | 35.0% | |
| ! | AGTCCATTTTCATTGCAATG+AGG | + | chr6_1:6779797-6779816 | None:intergenic | 35.0% |
| TTGTGTGAGTTCCAAGCAAA+AGG | - | chr6_1:6778566-6778585 | Msa0871720:CDS | 40.0% | |
| TGTGTGAGTTCCAAGCAAAA+GGG | - | chr6_1:6778567-6778586 | Msa0871720:CDS | 40.0% | |
| TCTAGAGACAGAGCAATAAG+GGG | + | chr6_1:6778610-6778629 | None:intergenic | 40.0% | |
| ! | CTTCTAGAGACAGAGCAATA+AGG | + | chr6_1:6778612-6778631 | None:intergenic | 40.0% |
| CATCATCCACCTCAAAACAA+AGG | - | chr6_1:6778648-6778667 | Msa0871720:CDS | 40.0% | |
| !!! | CTATCTCCTTTGTTTTGAGG+TGG | + | chr6_1:6778657-6778676 | None:intergenic | 40.0% |
| GTATCTCAAAGTCAAGGCAA+TGG | - | chr6_1:6778726-6778745 | Msa0871720:CDS | 40.0% | |
| ! | GCTTTGAGCAGAGTTGAATA+TGG | + | chr6_1:6778759-6778778 | None:intergenic | 40.0% |
| ACCTCAGAAAAGCAGTCTAA+TGG | - | chr6_1:6778786-6778805 | Msa0871720:CDS | 40.0% | |
| !! | TCCATTAGACTGCTTTTCTG+AGG | + | chr6_1:6778790-6778809 | None:intergenic | 40.0% |
| !! | CAGTCTAATGGATTTGAGGT+CGG | - | chr6_1:6778798-6778817 | Msa0871720:CDS | 40.0% |
| ! | AATGGATTTGAGGTCGGAAA+AGG | - | chr6_1:6778804-6778823 | Msa0871720:CDS | 40.0% |
| TGAGGACATCATCAACACAT+GGG | - | chr6_1:6778962-6778981 | Msa0871720:CDS | 40.0% | |
| CATCAACACATGGGAACTAA+TGG | - | chr6_1:6778971-6778990 | Msa0871720:CDS | 40.0% | |
| AACACATGGGAACTAATGGA+AGG | - | chr6_1:6778975-6778994 | Msa0871720:CDS | 40.0% | |
| ! | GATTGCCACTTATGAGAAGA+AGG | - | chr6_1:6779322-6779341 | Msa0871720:CDS | 40.0% |
| AGTGAAGGGAACTATGGTAA+AGG | - | chr6_1:6779503-6779522 | Msa0871720:CDS | 40.0% | |
| TGGTAAAGGAGGATTACCAA+AGG | - | chr6_1:6779517-6779536 | Msa0871720:CDS | 40.0% | |
| GAAATACATTGGTGGAGTTG+AGG | - | chr6_1:6779553-6779572 | Msa0871720:CDS | 40.0% | |
| ! | AGGATTGATGACATTGAAGG+AGG | - | chr6_1:6779632-6779651 | Msa0871720:CDS | 40.0% |
| GTTCCTTGTGAAACATGCTA+TGG | - | chr6_1:6779692-6779711 | Msa0871720:CDS | 40.0% | |
| CTTCCATAGCATGTTTCACA+AGG | + | chr6_1:6779698-6779717 | None:intergenic | 40.0% | |
| GAAGATGATGATTGTGAGGT+TGG | - | chr6_1:6779749-6779768 | Msa0871720:CDS | 40.0% | |
| TTGTGTGAGTTCCAAGCAAA+AGG | - | chr6_1:6778566-6778585 | Msa0871720:CDS | 40.0% | |
| TGTGTGAGTTCCAAGCAAAA+GGG | - | chr6_1:6778567-6778586 | Msa0871720:CDS | 40.0% | |
| TCTAGAGACAGAGCAATAAG+GGG | + | chr6_1:6778610-6778629 | None:intergenic | 40.0% | |
| ! | CTTCTAGAGACAGAGCAATA+AGG | + | chr6_1:6778612-6778631 | None:intergenic | 40.0% |
| CATCATCCACCTCAAAACAA+AGG | - | chr6_1:6778648-6778667 | Msa0871720:CDS | 40.0% | |
| !!! | CTATCTCCTTTGTTTTGAGG+TGG | + | chr6_1:6778657-6778676 | None:intergenic | 40.0% |
| GTATCTCAAAGTCAAGGCAA+TGG | - | chr6_1:6778726-6778745 | Msa0871720:CDS | 40.0% | |
| ! | GCTTTGAGCAGAGTTGAATA+TGG | + | chr6_1:6778759-6778778 | None:intergenic | 40.0% |
| ACCTCAGAAAAGCAGTCTAA+TGG | - | chr6_1:6778786-6778805 | Msa0871720:CDS | 40.0% | |
| !! | TCCATTAGACTGCTTTTCTG+AGG | + | chr6_1:6778790-6778809 | None:intergenic | 40.0% |
| !! | CAGTCTAATGGATTTGAGGT+CGG | - | chr6_1:6778798-6778817 | Msa0871720:CDS | 40.0% |
| ! | AATGGATTTGAGGTCGGAAA+AGG | - | chr6_1:6778804-6778823 | Msa0871720:CDS | 40.0% |
| TGAGGACATCATCAACACAT+GGG | - | chr6_1:6778962-6778981 | Msa0871720:CDS | 40.0% | |
| CATCAACACATGGGAACTAA+TGG | - | chr6_1:6778971-6778990 | Msa0871720:CDS | 40.0% | |
| AACACATGGGAACTAATGGA+AGG | - | chr6_1:6778975-6778994 | Msa0871720:CDS | 40.0% | |
| ! | GATTGCCACTTATGAGAAGA+AGG | - | chr6_1:6779322-6779341 | Msa0871720:CDS | 40.0% |
| AGTGAAGGGAACTATGGTAA+AGG | - | chr6_1:6779503-6779522 | Msa0871720:CDS | 40.0% | |
| TGGTAAAGGAGGATTACCAA+AGG | - | chr6_1:6779517-6779536 | Msa0871720:CDS | 40.0% | |
| GAAATACATTGGTGGAGTTG+AGG | - | chr6_1:6779553-6779572 | Msa0871720:CDS | 40.0% | |
| ! | AGGATTGATGACATTGAAGG+AGG | - | chr6_1:6779632-6779651 | Msa0871720:CDS | 40.0% |
| GTTCCTTGTGAAACATGCTA+TGG | - | chr6_1:6779692-6779711 | Msa0871720:CDS | 40.0% | |
| CTTCCATAGCATGTTTCACA+AGG | + | chr6_1:6779698-6779717 | None:intergenic | 40.0% | |
| GAAGATGATGATTGTGAGGT+TGG | - | chr6_1:6779749-6779768 | Msa0871720:CDS | 40.0% | |
| AATCACAACACCACCTTGTG+AGG | - | chr6_1:6778944-6778963 | Msa0871720:CDS | 45.0% | |
| !! | TTGATGATGTCCTCACAAGG+TGG | + | chr6_1:6778957-6778976 | None:intergenic | 45.0% |
| !! | GTGTTGATGATGTCCTCACA+AGG | + | chr6_1:6778960-6778979 | None:intergenic | 45.0% |
| GTGAGGACATCATCAACACA+TGG | - | chr6_1:6778961-6778980 | Msa0871720:CDS | 45.0% | |
| CCATTGCAAGAGAAGCAAGA+GGG | - | chr6_1:6779236-6779255 | Msa0871720:CDS | 45.0% | |
| CATTGCAAGAGAAGCAAGAG+GGG | - | chr6_1:6779237-6779256 | Msa0871720:CDS | 45.0% | |
| GAAGGGAACTATGGTAAAGG+AGG | - | chr6_1:6779506-6779525 | Msa0871720:CDS | 45.0% | |
| GATGACATTGAAGGAGGTGA+TGG | - | chr6_1:6779638-6779657 | Msa0871720:CDS | 45.0% | |
| TTGGTGAGTGTGGATTCCAA+AGG | - | chr6_1:6779768-6779787 | Msa0871720:CDS | 45.0% | |
| CATTGCAATGAGGACACCTT+TGG | + | chr6_1:6779787-6779806 | None:intergenic | 45.0% | |
| AATCACAACACCACCTTGTG+AGG | - | chr6_1:6778944-6778963 | Msa0871720:CDS | 45.0% | |
| !! | TTGATGATGTCCTCACAAGG+TGG | + | chr6_1:6778957-6778976 | None:intergenic | 45.0% |
| !! | GTGTTGATGATGTCCTCACA+AGG | + | chr6_1:6778960-6778979 | None:intergenic | 45.0% |
| GTGAGGACATCATCAACACA+TGG | - | chr6_1:6778961-6778980 | Msa0871720:CDS | 45.0% | |
| CCATTGCAAGAGAAGCAAGA+GGG | - | chr6_1:6779236-6779255 | Msa0871720:CDS | 45.0% | |
| CATTGCAAGAGAAGCAAGAG+GGG | - | chr6_1:6779237-6779256 | Msa0871720:CDS | 45.0% | |
| GAAGGGAACTATGGTAAAGG+AGG | - | chr6_1:6779506-6779525 | Msa0871720:CDS | 45.0% | |
| GATGACATTGAAGGAGGTGA+TGG | - | chr6_1:6779638-6779657 | Msa0871720:CDS | 45.0% | |
| TTGGTGAGTGTGGATTCCAA+AGG | - | chr6_1:6779768-6779787 | Msa0871720:CDS | 45.0% | |
| CATTGCAATGAGGACACCTT+TGG | + | chr6_1:6779787-6779806 | None:intergenic | 45.0% | |
| GCCATTGCAAGAGAAGCAAG+AGG | - | chr6_1:6779235-6779254 | Msa0871720:CDS | 50.0% | |
| CCCTCTTGCTTCTCTTGCAA+TGG | + | chr6_1:6779239-6779258 | None:intergenic | 50.0% | |
| ! | GACATTGAAGGAGGTGATGG+TGG | - | chr6_1:6779641-6779660 | Msa0871720:CDS | 50.0% |
| !! | GATTGTGAGGTTGGTGAGTG+TGG | - | chr6_1:6779758-6779777 | Msa0871720:CDS | 50.0% |
| GCCATTGCAAGAGAAGCAAG+AGG | - | chr6_1:6779235-6779254 | Msa0871720:CDS | 50.0% | |
| CCCTCTTGCTTCTCTTGCAA+TGG | + | chr6_1:6779239-6779258 | None:intergenic | 50.0% | |
| ! | GACATTGAAGGAGGTGATGG+TGG | - | chr6_1:6779641-6779660 | Msa0871720:CDS | 50.0% |
| !! | GATTGTGAGGTTGGTGAGTG+TGG | - | chr6_1:6779758-6779777 | Msa0871720:CDS | 50.0% |
| GCAAGAGAAGCAAGAGGGGA+TGG | - | chr6_1:6779241-6779260 | Msa0871720:CDS | 55.0% | |
| !! | AGGAGGTGATGGTGGATGTG+AGG | - | chr6_1:6779649-6779668 | Msa0871720:CDS | 55.0% |
| !! | GATGGTGGATGTGAGGCTTG+TGG | - | chr6_1:6779656-6779675 | Msa0871720:CDS | 55.0% |
| GCAAGAGAAGCAAGAGGGGA+TGG | - | chr6_1:6779241-6779260 | Msa0871720:CDS | 55.0% | |
| !! | AGGAGGTGATGGTGGATGTG+AGG | - | chr6_1:6779649-6779668 | Msa0871720:CDS | 55.0% |
| !! | GATGGTGGATGTGAGGCTTG+TGG | - | chr6_1:6779656-6779675 | Msa0871720:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 6778561 | 6779844 | 6778561 | ID=Msa0871720;Name=Msa0871720 |
| chr6_1 | mRNA | 6778561 | 6779844 | 6778561 | ID=Msa0871720-mRNA-1;Parent=Msa0871720;Name=Msa0871720-mRNA-1;_AED=0.00;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|427 |
| chr6_1 | exon | 6778561 | 6779844 | 6778561 | ID=Msa0871720-mRNA-1:exon:2115;Parent=Msa0871720-mRNA-1 |
| chr6_1 | CDS | 6778561 | 6779844 | 6778561 | ID=Msa0871720-mRNA-1:cds;Parent=Msa0871720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
