Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1006010 | XP_003621109.1 | 100.000 | 101 | 0 | 0 | 30 | 130 | 177 | 277 | 4.24e-65 | 209 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1006010 | sp|P42054|VDAC_PEA | 83.168 | 101 | 17 | 0 | 30 | 130 | 176 | 276 | 5.84e-58 | 183 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1006010 | G7KYU2 | 100.000 | 101 | 0 | 0 | 30 | 130 | 177 | 277 | 2.03e-65 | 209 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017320 | Msa1006010 | -0.819249 | 1.282701e-52 | -8.615850e-47 |
| Msa0021210 | Msa1006010 | -0.806585 | 7.658192e-50 | -8.615850e-47 |
| Msa0038870 | Msa1006010 | -0.811637 | 6.337750e-51 | -8.615850e-47 |
| Msa0039900 | Msa1006010 | 0.816663 | 4.923136e-52 | -8.615850e-47 |
| Msa0046560 | Msa1006010 | -0.812294 | 4.557004e-51 | -8.615850e-47 |
| Msa0056450 | Msa1006010 | -0.811201 | 7.880782e-51 | -8.615850e-47 |
| Msa0061500 | Msa1006010 | -0.837125 | 6.252556e-57 | -8.615850e-47 |
| Msa0065680 | Msa1006010 | 0.829792 | 4.221942e-55 | -8.615850e-47 |
| Msa0078610 | Msa1006010 | -0.800929 | 1.144376e-48 | -8.615850e-47 |
| Msa0078640 | Msa1006010 | -0.810797 | 9.638972e-51 | -8.615850e-47 |
| Msa0082440 | Msa1006010 | -0.807227 | 5.601710e-50 | -8.615850e-47 |
| Msa0095360 | Msa1006010 | -0.807867 | 4.097391e-50 | -8.615850e-47 |
| Msa0095770 | Msa1006010 | -0.807424 | 5.089294e-50 | -8.615850e-47 |
| Msa0106620 | Msa1006010 | -0.809991 | 1.439221e-50 | -8.615850e-47 |
| Msa0106710 | Msa1006010 | -0.820012 | 8.586357e-53 | -8.615850e-47 |
| Msa0111080 | Msa1006010 | -0.812534 | 4.038554e-51 | -8.615850e-47 |
| Msa0118540 | Msa1006010 | -0.818264 | 2.146164e-52 | -8.615850e-47 |
| Msa0120530 | Msa1006010 | 0.801178 | 1.017631e-48 | -8.615850e-47 |
| Msa0602980 | Msa1006010 | -0.801265 | 9.768261e-49 | -8.615850e-47 |
| Msa0604290 | Msa1006010 | -0.822376 | 2.448314e-53 | -8.615850e-47 |
| Msa0607320 | Msa1006010 | -0.818121 | 2.312859e-52 | -8.615850e-47 |
| Msa0616450 | Msa1006010 | -0.806786 | 6.944643e-50 | -8.615850e-47 |
| Msa0616550 | Msa1006010 | -0.840574 | 8.011097e-58 | -8.615850e-47 |
| Msa0624960 | Msa1006010 | -0.805590 | 1.240572e-49 | -8.615850e-47 |
| Msa0629240 | Msa1006010 | -0.822291 | 2.562384e-53 | -8.615850e-47 |
| Msa0638360 | Msa1006010 | -0.836970 | 6.849243e-57 | -8.615850e-47 |
| Msa0640940 | Msa1006010 | -0.849581 | 2.950781e-60 | -8.615850e-47 |
| Msa0641730 | Msa1006010 | -0.825048 | 5.795419e-54 | -8.615850e-47 |
| Msa0645530 | Msa1006010 | -0.808394 | 3.165085e-50 | -8.615850e-47 |
| Msa0651560 | Msa1006010 | -0.811330 | 7.390893e-51 | -8.615850e-47 |
| Msa0654310 | Msa1006010 | -0.801802 | 7.582734e-49 | -8.615850e-47 |
| Msa0656000 | Msa1006010 | -0.821057 | 4.942387e-53 | -8.615850e-47 |
| Msa0661320 | Msa1006010 | -0.815995 | 6.947713e-52 | -8.615850e-47 |
| Msa0667740 | Msa1006010 | -0.804944 | 1.693567e-49 | -8.615850e-47 |
| Msa0679360 | Msa1006010 | -0.846084 | 2.711513e-59 | -8.615850e-47 |
| Msa0682680 | Msa1006010 | -0.807270 | 5.485699e-50 | -8.615850e-47 |
| Msa0685090 | Msa1006010 | -0.808998 | 2.350734e-50 | -8.615850e-47 |
| Msa0689760 | Msa1006010 | -0.819463 | 1.146165e-52 | -8.615850e-47 |
| Msa0689780 | Msa1006010 | -0.806134 | 9.532557e-50 | -8.615850e-47 |
| Msa0696850 | Msa1006010 | -0.844190 | 8.813296e-59 | -8.615850e-47 |
| Msa0696860 | Msa1006010 | -0.814985 | 1.165842e-51 | -8.615850e-47 |
| Msa0699880 | Msa1006010 | -0.821950 | 3.073919e-53 | -8.615850e-47 |
| Msa0705190 | Msa1006010 | -0.806986 | 6.300709e-50 | -8.615850e-47 |
| Msa0705990 | Msa1006010 | -0.810772 | 9.761299e-51 | -8.615850e-47 |
| Msa0709120 | Msa1006010 | -0.826700 | 2.349274e-54 | -8.615850e-47 |
| Msa0711130 | Msa1006010 | -0.801641 | 8.182906e-49 | -8.615850e-47 |
| Msa0711150 | Msa1006010 | -0.801200 | 1.007291e-48 | -8.615850e-47 |
| Msa0712260 | Msa1006010 | -0.805133 | 1.546394e-49 | -8.615850e-47 |
| Msa0715410 | Msa1006010 | -0.801418 | 9.089060e-49 | -8.615850e-47 |
| Msa0716860 | Msa1006010 | -0.814083 | 1.845745e-51 | -8.615850e-47 |
| Msa0743530 | Msa1006010 | -0.820456 | 6.795563e-53 | -8.615850e-47 |
| Msa0746170 | Msa1006010 | -0.836599 | 8.513191e-57 | -8.615850e-47 |
| Msa0746210 | Msa1006010 | -0.837582 | 4.775194e-57 | -8.615850e-47 |
| Msa0749440 | Msa1006010 | -0.821977 | 3.030168e-53 | -8.615850e-47 |
| Msa0750250 | Msa1006010 | -0.808663 | 2.772618e-50 | -8.615850e-47 |
| Msa0750850 | Msa1006010 | -0.802978 | 4.340163e-49 | -8.615850e-47 |
| Msa0756380 | Msa1006010 | -0.850603 | 1.525934e-60 | -8.615850e-47 |
| Msa0763890 | Msa1006010 | -0.840533 | 8.213571e-58 | -8.615850e-47 |
| Msa0763920 | Msa1006010 | -0.856492 | 3.100888e-62 | -8.615850e-47 |
| Msa0780280 | Msa1006010 | -0.800178 | 1.627733e-48 | -8.615850e-47 |
| Msa0784480 | Msa1006010 | -0.810978 | 8.808014e-51 | -8.615850e-47 |
| Msa0789560 | Msa1006010 | -0.838680 | 2.489841e-57 | -8.615850e-47 |
| Msa0797250 | Msa1006010 | -0.801788 | 7.632556e-49 | -8.615850e-47 |
| Msa0808100 | Msa1006010 | -0.809453 | 1.878209e-50 | -8.615850e-47 |
| Msa0810270 | Msa1006010 | -0.820617 | 6.240117e-53 | -8.615850e-47 |
| Msa0818060 | Msa1006010 | -0.800550 | 1.367663e-48 | -8.615850e-47 |
| Msa0821800 | Msa1006010 | -0.803390 | 3.566815e-49 | -8.615850e-47 |
| Msa0830230 | Msa1006010 | -0.801232 | 9.923128e-49 | -8.615850e-47 |
| Msa0831130 | Msa1006010 | -0.808537 | 2.949381e-50 | -8.615850e-47 |
| Msa0831850 | Msa1006010 | -0.800267 | 1.561873e-48 | -8.615850e-47 |
| Msa0124320 | Msa1006010 | -0.806418 | 8.307352e-50 | -8.615850e-47 |
| Msa0126790 | Msa1006010 | -0.821446 | 4.021416e-53 | -8.615850e-47 |
| Msa0130720 | Msa1006010 | -0.841886 | 3.620679e-58 | -8.615850e-47 |
| Msa0136630 | Msa1006010 | -0.803943 | 2.738738e-49 | -8.615850e-47 |
| Msa0139670 | Msa1006010 | -0.830936 | 2.218184e-55 | -8.615850e-47 |
| Msa0142500 | Msa1006010 | -0.800119 | 1.673669e-48 | -8.615850e-47 |
| Msa0152560 | Msa1006010 | -0.847765 | 9.402910e-60 | -8.615850e-47 |
| Msa0154840 | Msa1006010 | 0.809833 | 1.556006e-50 | -8.615850e-47 |
| Msa0154920 | Msa1006010 | -0.819680 | 1.022853e-52 | -8.615850e-47 |
| Msa0160960 | Msa1006010 | -0.829499 | 4.973642e-55 | -8.615850e-47 |
| Msa0163770 | Msa1006010 | 0.824788 | 6.675610e-54 | -8.615850e-47 |
| Msa0167980 | Msa1006010 | -0.801861 | 7.373455e-49 | -8.615850e-47 |
| Msa0171870 | Msa1006010 | -0.830107 | 3.538031e-55 | -8.615850e-47 |
| Msa0172080 | Msa1006010 | -0.807034 | 6.157032e-50 | -8.615850e-47 |
| Msa0183760 | Msa1006010 | -0.828501 | 8.680628e-55 | -8.615850e-47 |
| Msa0183850 | Msa1006010 | -0.807843 | 4.145679e-50 | -8.615850e-47 |
| Msa0186950 | Msa1006010 | -0.802076 | 6.659066e-49 | -8.615850e-47 |
| Msa0187830 | Msa1006010 | -0.821633 | 3.639383e-53 | -8.615850e-47 |
| Msa0189030 | Msa1006010 | -0.805728 | 1.160635e-49 | -8.615850e-47 |
| Msa0189610 | Msa1006010 | -0.800481 | 1.412685e-48 | -8.615850e-47 |
| Msa0192640 | Msa1006010 | -0.840163 | 1.025893e-57 | -8.615850e-47 |
| Msa0195100 | Msa1006010 | -0.802340 | 5.878227e-49 | -8.615850e-47 |
| Msa0197650 | Msa1006010 | -0.800579 | 1.349029e-48 | -8.615850e-47 |
| Msa0200650 | Msa1006010 | -0.803739 | 3.019453e-49 | -8.615850e-47 |
| Msa0202800 | Msa1006010 | -0.823475 | 1.357722e-53 | -8.615850e-47 |
| Msa0204840 | Msa1006010 | -0.805622 | 1.221535e-49 | -8.615850e-47 |
| Msa0207040 | Msa1006010 | 0.820680 | 6.036367e-53 | -8.615850e-47 |
| Msa0218370 | Msa1006010 | -0.804336 | 2.268722e-49 | -8.615850e-47 |
| Msa0220730 | Msa1006010 | -0.848797 | 4.874015e-60 | -8.615850e-47 |
| Msa0223330 | Msa1006010 | -0.807620 | 4.623407e-50 | -8.615850e-47 |
| Msa0223340 | Msa1006010 | -0.807983 | 3.871325e-50 | -8.615850e-47 |
| Msa0231240 | Msa1006010 | -0.800163 | 1.639296e-48 | -8.615850e-47 |
| Msa0232340 | Msa1006010 | -0.827671 | 1.375415e-54 | -8.615850e-47 |
| Msa0233380 | Msa1006010 | -0.813242 | 2.826266e-51 | -8.615850e-47 |
| Msa0236420 | Msa1006010 | -0.806355 | 8.565211e-50 | -8.615850e-47 |
| Msa0236720 | Msa1006010 | -0.805373 | 1.377273e-49 | -8.615850e-47 |
| Msa0366210 | Msa1006010 | -0.818254 | 2.157456e-52 | -8.615850e-47 |
| Msa0371950 | Msa1006010 | -0.820349 | 7.190866e-53 | -8.615850e-47 |
| Msa0381610 | Msa1006010 | 0.823774 | 1.155537e-53 | -8.615850e-47 |
| Msa0382370 | Msa1006010 | -0.882027 | 1.469803e-70 | -8.615850e-47 |
| Msa0382490 | Msa1006010 | -0.816885 | 4.390339e-52 | -8.615850e-47 |
| Msa0388650 | Msa1006010 | -0.835822 | 1.341638e-56 | -8.615850e-47 |
| Msa0388730 | Msa1006010 | -0.844633 | 6.697922e-59 | -8.615850e-47 |
| Msa0389210 | Msa1006010 | -0.813071 | 3.080776e-51 | -8.615850e-47 |
| Msa0389770 | Msa1006010 | -0.800583 | 1.346336e-48 | -8.615850e-47 |
| Msa0390530 | Msa1006010 | -0.805833 | 1.103074e-49 | -8.615850e-47 |
| Msa0393430 | Msa1006010 | -0.845349 | 4.293467e-59 | -8.615850e-47 |
| Msa0393620 | Msa1006010 | -0.801340 | 9.431825e-49 | -8.615850e-47 |
| Msa0394120 | Msa1006010 | -0.810087 | 1.371838e-50 | -8.615850e-47 |
| Msa0394470 | Msa1006010 | -0.802633 | 5.114942e-49 | -8.615850e-47 |
| Msa0395980 | Msa1006010 | -0.853796 | 1.885574e-61 | -8.615850e-47 |
| Msa0398200 | Msa1006010 | -0.836541 | 8.807423e-57 | -8.615850e-47 |
| Msa0403770 | Msa1006010 | -0.840740 | 7.246207e-58 | -8.615850e-47 |
| Msa0414140 | Msa1006010 | -0.810396 | 1.176805e-50 | -8.615850e-47 |
| Msa0417330 | Msa1006010 | -0.815877 | 7.378707e-52 | -8.615850e-47 |
| Msa0432160 | Msa1006010 | -0.876193 | 1.696398e-68 | -8.615850e-47 |
| Msa0432670 | Msa1006010 | -0.828021 | 1.132980e-54 | -8.615850e-47 |
| Msa0433410 | Msa1006010 | 0.801318 | 9.527513e-49 | -8.615850e-47 |
| Msa0440510 | Msa1006010 | -0.832391 | 9.707162e-56 | -8.615850e-47 |
| Msa0443430 | Msa1006010 | -0.814302 | 1.651133e-51 | -8.615850e-47 |
| Msa0450400 | Msa1006010 | 0.806200 | 9.233680e-50 | -8.615850e-47 |
| Msa0458740 | Msa1006010 | -0.806686 | 7.293263e-50 | -8.615850e-47 |
| Msa0469620 | Msa1006010 | 0.815177 | 1.056479e-51 | -8.615850e-47 |
| Msa0476680 | Msa1006010 | -0.881180 | 2.972611e-70 | -8.615850e-47 |
| Msa0481970 | Msa1006010 | -0.804764 | 1.846713e-49 | -8.615850e-47 |
| Msa0482180 | Msa1006010 | -0.815561 | 8.678265e-52 | -8.615850e-47 |
| Msa0985180 | Msa1006010 | -0.811733 | 6.041092e-51 | -8.615850e-47 |
| Msa0985220 | Msa1006010 | -0.802163 | 6.390569e-49 | -8.615850e-47 |
| Msa0986510 | Msa1006010 | -0.819051 | 1.422990e-52 | -8.615850e-47 |
| Msa0992580 | Msa1006010 | -0.802691 | 4.975193e-49 | -8.615850e-47 |
| Msa0992600 | Msa1006010 | -0.810953 | 8.919508e-51 | -8.615850e-47 |
| Msa0994370 | Msa1006010 | -0.809290 | 2.036067e-50 | -8.615850e-47 |
| Msa0994910 | Msa1006010 | -0.843894 | 1.057938e-58 | -8.615850e-47 |
| Msa1006010 | Msa1011090 | -0.827242 | 1.743587e-54 | -8.615850e-47 |
| Msa1006010 | Msa1018040 | -0.828089 | 1.091109e-54 | -8.615850e-47 |
| Msa1006010 | Msa1024680 | -0.800570 | 1.354426e-48 | -8.615850e-47 |
| Msa1006010 | Msa1025080 | -0.807967 | 3.902457e-50 | -8.615850e-47 |
| Msa1006010 | Msa1029060 | 0.806233 | 9.088212e-50 | -8.615850e-47 |
| Msa1006010 | Msa1034280 | -0.817790 | 2.746516e-52 | -8.615850e-47 |
| Msa1006010 | Msa1034500 | -0.819757 | 9.823486e-53 | -8.615850e-47 |
| Msa1006010 | Msa1036610 | -0.803341 | 3.651304e-49 | -8.615850e-47 |
| Msa1006010 | Msa1037520 | -0.807345 | 5.290326e-50 | -8.615850e-47 |
| Msa1006010 | Msa1039710 | 0.809010 | 2.337636e-50 | -8.615850e-47 |
| Msa1006010 | Msa1040980 | -0.824710 | 6.962920e-54 | -8.615850e-47 |
| Msa1006010 | Msa1048070 | 0.837030 | 6.609973e-57 | -8.615850e-47 |
| Msa1006010 | Msa1050700 | -0.800329 | 1.516539e-48 | -8.615850e-47 |
| Msa1006010 | Msa1050740 | -0.800494 | 1.403913e-48 | -8.615850e-47 |
| Msa1006010 | Msa1054150 | 0.812361 | 4.406780e-51 | -8.615850e-47 |
| Msa1006010 | Msa1063420 | -0.822750 | 2.004149e-53 | -8.615850e-47 |
| Msa1006010 | Msa1068870 | -0.820289 | 7.419114e-53 | -8.615850e-47 |
| Msa1006010 | Msa1071320 | -0.814250 | 1.695080e-51 | -8.615850e-47 |
| Msa1006010 | Msa1072900 | -0.824214 | 9.113017e-54 | -8.615850e-47 |
| Msa1006010 | Msa1076960 | -0.810099 | 1.364270e-50 | -8.615850e-47 |
| Msa1006010 | Msa1077070 | -0.807702 | 4.441962e-50 | -8.615850e-47 |
| Msa1006010 | Msa1079430 | -0.808435 | 3.101122e-50 | -8.615850e-47 |
| Msa1006010 | Msa1080330 | 0.809278 | 2.047863e-50 | -8.615850e-47 |
| Msa1006010 | Msa1081220 | -0.817293 | 3.554803e-52 | -8.615850e-47 |
| Msa1006010 | Msa1081790 | 0.818827 | 1.599575e-52 | -8.615850e-47 |
| Msa1006010 | Msa1087990 | -0.808516 | 2.980652e-50 | -8.615850e-47 |
| Msa1006010 | Msa1100130 | 0.846258 | 2.431610e-59 | -8.615850e-47 |
| Msa1006010 | Msa1122780 | -0.800998 | 1.107683e-48 | -8.615850e-47 |
| Msa1006010 | Msa1122860 | -0.809296 | 2.029648e-50 | -8.615850e-47 |
| Msa1006010 | Msa1127380 | -0.812981 | 3.224300e-51 | -8.615850e-47 |
| Msa1006010 | Msa1127430 | -0.813258 | 2.803853e-51 | -8.615850e-47 |
| Msa1006010 | Msa1130400 | -0.827519 | 1.496298e-54 | -8.615850e-47 |
| Msa1006010 | Msa1131490 | -0.810461 | 1.139804e-50 | -8.615850e-47 |
| Msa1006010 | Msa1135510 | 0.834226 | 3.386778e-56 | -8.615850e-47 |
| Msa1006010 | Msa1137830 | -0.824561 | 7.549325e-54 | -8.615850e-47 |
| Msa1006010 | Msa1142670 | -0.807725 | 4.392110e-50 | -8.615850e-47 |
| Msa1006010 | Msa1156150 | 0.808969 | 2.384537e-50 | -8.615850e-47 |
| Msa1006010 | Msa1166090 | 0.801157 | 1.027945e-48 | -8.615850e-47 |
| Msa1006010 | Msa1168550 | -0.839536 | 1.493979e-57 | -8.615850e-47 |
| Msa1006010 | Msa1168590 | -0.831497 | 1.614115e-55 | -8.615850e-47 |
| Msa1006010 | Msa1177560 | -0.827516 | 1.498101e-54 | -8.615850e-47 |
| Msa1006010 | Msa1177780 | -0.824196 | 9.200351e-54 | -8.615850e-47 |
| Msa1006010 | Msa1188180 | -0.819011 | 1.452822e-52 | -8.615850e-47 |
| Msa1006010 | Msa1188710 | -0.802030 | 6.807602e-49 | -8.615850e-47 |
| Msa1006010 | Msa1190970 | -0.806318 | 8.718375e-50 | -8.615850e-47 |
| Msa1006010 | Msa1205590 | -0.812445 | 4.223652e-51 | -8.615850e-47 |
| Msa1006010 | Msa1211340 | -0.825330 | 4.972493e-54 | -8.615850e-47 |
| Msa1006010 | Msa1220870 | -0.811368 | 7.250211e-51 | -8.615850e-47 |
| Msa1006010 | Msa1221330 | -0.824958 | 6.087017e-54 | -8.615850e-47 |
| Msa1006010 | Msa1225100 | -0.810418 | 1.164387e-50 | -8.615850e-47 |
| Msa1006010 | Msa1234620 | -0.815478 | 9.055988e-52 | -8.615850e-47 |
| Msa1006010 | Msa1246360 | -0.824603 | 7.381077e-54 | -8.615850e-47 |
| Msa1006010 | Msa1248830 | -0.820162 | 7.934108e-53 | -8.615850e-47 |
| Msa1006010 | Msa1253450 | -0.801644 | 8.169336e-49 | -8.615850e-47 |
| Msa1006010 | Msa1257800 | 0.803926 | 2.760255e-49 | -8.615850e-47 |
| Msa1006010 | Msa1258370 | -0.803807 | 2.922850e-49 | -8.615850e-47 |
| Msa1006010 | Msa1259640 | -0.819818 | 9.509636e-53 | -8.615850e-47 |
| Msa1006010 | Msa1270660 | -0.827723 | 1.336112e-54 | -8.615850e-47 |
| Msa1006010 | Msa1271130 | -0.861396 | 1.057010e-63 | -8.615850e-47 |
| Msa1006010 | Msa1283740 | -0.826467 | 2.669969e-54 | -8.615850e-47 |
| Msa1006010 | Msa1297530 | -0.850463 | 1.670371e-60 | -8.615850e-47 |
| Msa1006010 | Msa1299330 | -0.802250 | 6.132771e-49 | -8.615850e-47 |
| Msa1006010 | Msa1303270 | -0.800435 | 1.442985e-48 | -8.615850e-47 |
| Msa1006010 | Msa1303280 | -0.805650 | 1.204855e-49 | -8.615850e-47 |
| Msa1006010 | Msa1305200 | -0.800819 | 1.204885e-48 | -8.615850e-47 |
| Msa1006010 | Msa1305350 | -0.810282 | 1.245739e-50 | -8.615850e-47 |
| Msa1006010 | Msa1305810 | -0.805565 | 1.255448e-49 | -8.615850e-47 |
| Msa1006010 | Msa1323690 | -0.827203 | 1.781533e-54 | -8.615850e-47 |
| Msa1006010 | Msa1329790 | -0.816671 | 4.903971e-52 | -8.615850e-47 |
| Msa1006010 | Msa1329800 | -0.804734 | 1.874037e-49 | -8.615850e-47 |
| Msa1006010 | Msa1329870 | -0.809324 | 2.001576e-50 | -8.615850e-47 |
| Msa1006010 | Msa1332050 | -0.834260 | 3.321633e-56 | -8.615850e-47 |
| Msa1006010 | Msa1335230 | -0.802188 | 6.315066e-49 | -8.615850e-47 |
| Msa1006010 | Msa1336040 | -0.814899 | 1.217970e-51 | -8.615850e-47 |
| Msa1006010 | Msa1338400 | -0.852552 | 4.284664e-61 | -8.615850e-47 |
| Msa1006010 | Msa1349450 | -0.819684 | 1.020380e-52 | -8.615850e-47 |
| Msa1006010 | Msa1355890 | -0.808045 | 3.756441e-50 | -8.615850e-47 |
| Msa1006010 | Msa1369920 | 0.827012 | 1.978363e-54 | -8.615850e-47 |
| Msa1006010 | Msa1370590 | -0.814755 | 1.310575e-51 | -8.615850e-47 |
| Msa1006010 | Msa1370690 | 0.818026 | 2.429440e-52 | -8.615850e-47 |
| Msa1006010 | Msa1371940 | -0.816506 | 5.339657e-52 | -8.615850e-47 |
| Msa1006010 | Msa1372290 | -0.837549 | 4.868420e-57 | -8.615850e-47 |
| Msa1006010 | Msa1378410 | -0.804457 | 2.140846e-49 | -8.615850e-47 |
| Msa1006010 | Msa1384100 | -0.815675 | 8.188165e-52 | -8.615850e-47 |
| Msa1006010 | Msa1390680 | -0.812381 | 4.362957e-51 | -8.615850e-47 |
| Msa1006010 | Msa1390700 | -0.804715 | 1.891404e-49 | -8.615850e-47 |
| Msa1006010 | Msa1392890 | -0.811918 | 5.505337e-51 | -8.615850e-47 |
| Msa1006010 | Msa1392910 | -0.803954 | 2.723572e-49 | -8.615850e-47 |
| Msa1006010 | Msa1394310 | -0.824433 | 8.092275e-54 | -8.615850e-47 |
| Msa1006010 | Msa1396400 | 0.800183 | 1.623897e-48 | -8.615850e-47 |
| Msa1006010 | Msa1400930 | -0.850665 | 1.466170e-60 | -8.615850e-47 |
| Msa1006010 | Msa1401460 | -0.848997 | 4.288355e-60 | -8.615850e-47 |
| Msa1006010 | Msa1405220 | -0.807556 | 4.770790e-50 | -8.615850e-47 |
| Msa1006010 | Msa1416260 | -0.809303 | 2.022551e-50 | -8.615850e-47 |
| Msa1006010 | Msa1418440 | -0.807695 | 4.457857e-50 | -8.615850e-47 |
| Msa1006010 | Msa1420250 | -0.820342 | 7.214814e-53 | -8.615850e-47 |
| Msa1006010 | Msa1420270 | -0.819281 | 1.261346e-52 | -8.615850e-47 |
| Msa1006010 | Msa1424350 | -0.834075 | 3.696065e-56 | -8.615850e-47 |
| Msa1006010 | Msa1426910 | -0.845742 | 3.359729e-59 | -8.615850e-47 |
| Msa1006010 | Msa1430130 | -0.815471 | 9.089866e-52 | -8.615850e-47 |
| Msa1006010 | Msa1433220 | -0.806762 | 7.028987e-50 | -8.615850e-47 |
| Msa1006010 | Msa1437730 | -0.814003 | 1.921960e-51 | -8.615850e-47 |
| Msa1006010 | Msa1442790 | -0.832879 | 7.347976e-56 | -8.615850e-47 |
| Msa1006010 | Msa1444120 | -0.821680 | 3.550216e-53 | -8.615850e-47 |
| Msa1006010 | Msa1444260 | -0.801561 | 8.495300e-49 | -8.615850e-47 |
| Msa1006010 | Msa1446080 | -0.839529 | 1.500751e-57 | -8.615850e-47 |
| Msa1006010 | Msa1454570 | -0.800075 | 1.708380e-48 | -8.615850e-47 |
| Msa1006010 | Msa1454960 | -0.832289 | 1.028976e-55 | -8.615850e-47 |
| Msa1006010 | Msa1456230 | -0.839960 | 1.159257e-57 | -8.615850e-47 |
| Msa1006010 | Msa1457160 | -0.816518 | 5.306187e-52 | -8.615850e-47 |
| Msa1006010 | Msa1458090 | -0.813360 | 2.662863e-51 | -8.615850e-47 |
| Msa1006010 | Msa1458340 | -0.847263 | 1.291454e-59 | -8.615850e-47 |
| Msa1006010 | Msa1458600 | -0.831250 | 1.856396e-55 | -8.615850e-47 |
| Msa1006010 | Msa1460320 | 0.842903 | 1.945902e-58 | -8.615850e-47 |
| Msa1006010 | Msa1460750 | -0.815079 | 1.110695e-51 | -8.615850e-47 |
| Msa1006010 | Msa1462360 | -0.808673 | 2.758646e-50 | -8.615850e-47 |
| Msa1006010 | Msa1462660 | -0.811953 | 5.408712e-51 | -8.615850e-47 |
| Msa1006010 | Msa1465570 | -0.828474 | 8.813403e-55 | -8.615850e-47 |
| Msa0249550 | Msa1006010 | -0.822554 | 2.226408e-53 | -8.615850e-47 |
| Msa0257490 | Msa1006010 | -0.804182 | 2.442168e-49 | -8.615850e-47 |
| Msa0259210 | Msa1006010 | -0.803924 | 2.763790e-49 | -8.615850e-47 |
| Msa0259230 | Msa1006010 | -0.806459 | 8.140470e-50 | -8.615850e-47 |
| Msa0264830 | Msa1006010 | -0.811220 | 7.806777e-51 | -8.615850e-47 |
| Msa0270960 | Msa1006010 | -0.804462 | 2.135675e-49 | -8.615850e-47 |
| Msa0271790 | Msa1006010 | -0.840126 | 1.049156e-57 | -8.615850e-47 |
| Msa0277420 | Msa1006010 | -0.831354 | 1.750945e-55 | -8.615850e-47 |
| Msa0278580 | Msa1006010 | -0.800233 | 1.586951e-48 | -8.615850e-47 |
| Msa0296790 | Msa1006010 | -0.812689 | 3.737121e-51 | -8.615850e-47 |
| Msa0296820 | Msa1006010 | -0.805531 | 1.276241e-49 | -8.615850e-47 |
| Msa0299660 | Msa1006010 | -0.803647 | 3.155077e-49 | -8.615850e-47 |
| Msa0303150 | Msa1006010 | -0.812907 | 3.347897e-51 | -8.615850e-47 |
| Msa0308460 | Msa1006010 | -0.820675 | 6.052116e-53 | -8.615850e-47 |
| Msa0308630 | Msa1006010 | -0.804482 | 2.114667e-49 | -8.615850e-47 |
| Msa0309270 | Msa1006010 | -0.824855 | 6.439254e-54 | -8.615850e-47 |
| Msa0310430 | Msa1006010 | -0.826856 | 2.155949e-54 | -8.615850e-47 |
| Msa0311510 | Msa1006010 | -0.817069 | 3.992434e-52 | -8.615850e-47 |
| Msa0311730 | Msa1006010 | -0.803224 | 3.860218e-49 | -8.615850e-47 |
| Msa0312530 | Msa1006010 | -0.805930 | 1.052365e-49 | -8.615850e-47 |
| Msa0312910 | Msa1006010 | -0.835223 | 1.901093e-56 | -8.615850e-47 |
| Msa0317970 | Msa1006010 | -0.812107 | 5.007719e-51 | -8.615850e-47 |
| Msa0319290 | Msa1006010 | -0.826922 | 2.079637e-54 | -8.615850e-47 |
| Msa0320430 | Msa1006010 | -0.804086 | 2.556773e-49 | -8.615850e-47 |
| Msa0336300 | Msa1006010 | -0.811493 | 6.810013e-51 | -8.615850e-47 |
| Msa0336310 | Msa1006010 | -0.813581 | 2.380598e-51 | -8.615850e-47 |
| Msa0336320 | Msa1006010 | -0.809415 | 1.913878e-50 | -8.615850e-47 |
| Msa0340340 | Msa1006010 | -0.811822 | 5.776366e-51 | -8.615850e-47 |
| Msa0340690 | Msa1006010 | -0.811727 | 6.058156e-51 | -8.615850e-47 |
| Msa0340710 | Msa1006010 | -0.817998 | 2.465460e-52 | -8.615850e-47 |
| Msa0343850 | Msa1006010 | -0.818528 | 1.870104e-52 | -8.615850e-47 |
| Msa0347750 | Msa1006010 | -0.831180 | 1.931994e-55 | -8.615850e-47 |
| Msa0347950 | Msa1006010 | -0.802471 | 5.524107e-49 | -8.615850e-47 |
| Msa0347990 | Msa1006010 | -0.810772 | 9.763281e-51 | -8.615850e-47 |
| Msa0362890 | Msa1006010 | -0.841802 | 3.809280e-58 | -8.615850e-47 |
| Msa0363790 | Msa1006010 | -0.805748 | 1.149380e-49 | -8.615850e-47 |
| Msa0482940 | Msa1006010 | -0.816642 | 4.977838e-52 | -8.615850e-47 |
| Msa0488780 | Msa1006010 | -0.808954 | 2.402363e-50 | -8.615850e-47 |
| Msa0489660 | Msa1006010 | -0.802058 | 6.716088e-49 | -8.615850e-47 |
| Msa0491000 | Msa1006010 | -0.855185 | 7.473944e-62 | -8.615850e-47 |
| Msa0521010 | Msa1006010 | -0.881913 | 1.615700e-70 | -8.615850e-47 |
| Msa0526070 | Msa1006010 | 0.805424 | 1.343946e-49 | -8.615850e-47 |
| Msa0542560 | Msa1006010 | -0.829962 | 3.837837e-55 | -8.615850e-47 |
| Msa0549780 | Msa1006010 | -0.800520 | 1.386666e-48 | -8.615850e-47 |
| Msa0549890 | Msa1006010 | -0.825847 | 3.749781e-54 | -8.615850e-47 |
| Msa0555320 | Msa1006010 | -0.816521 | 5.298205e-52 | -8.615850e-47 |
| Msa0566350 | Msa1006010 | -0.826117 | 3.234889e-54 | -8.615850e-47 |
| Msa0566750 | Msa1006010 | -0.834925 | 2.260037e-56 | -8.615850e-47 |
| Msa0581400 | Msa1006010 | -0.823435 | 1.386985e-53 | -8.615850e-47 |
| Msa0582280 | Msa1006010 | -0.808352 | 3.230351e-50 | -8.615850e-47 |
| Msa0585650 | Msa1006010 | 0.801512 | 8.694562e-49 | -8.615850e-47 |
| Msa0588220 | Msa1006010 | -0.815055 | 1.124426e-51 | -8.615850e-47 |
| Msa0592270 | Msa1006010 | -0.812217 | 4.738807e-51 | -8.615850e-47 |
| Msa0594200 | Msa1006010 | -0.809996 | 1.435326e-50 | -8.615850e-47 |
| Msa0600450 | Msa1006010 | -0.847728 | 9.624808e-60 | -8.615850e-47 |
| Msa0842770 | Msa1006010 | -0.802401 | 5.708673e-49 | -8.615850e-47 |
| Msa0844110 | Msa1006010 | -0.834452 | 2.973161e-56 | -8.615850e-47 |
| Msa0857300 | Msa1006010 | -0.827899 | 1.212386e-54 | -8.615850e-47 |
| Msa0861470 | Msa1006010 | -0.809757 | 1.616348e-50 | -8.615850e-47 |
| Msa0861570 | Msa1006010 | -0.812599 | 3.909301e-51 | -8.615850e-47 |
| Msa0868160 | Msa1006010 | -0.812303 | 4.537030e-51 | -8.615850e-47 |
| Msa0892570 | Msa1006010 | -0.803062 | 4.170456e-49 | -8.615850e-47 |
| Msa0894710 | Msa1006010 | -0.805055 | 1.605344e-49 | -8.615850e-47 |
| Msa0902830 | Msa1006010 | -0.806823 | 6.821061e-50 | -8.615850e-47 |
| Msa0903780 | Msa1006010 | -0.802941 | 4.417051e-49 | -8.615850e-47 |
| Msa0905750 | Msa1006010 | -0.803005 | 4.284796e-49 | -8.615850e-47 |
| Msa0921420 | Msa1006010 | -0.844211 | 8.700522e-59 | -8.615850e-47 |
| Msa0927380 | Msa1006010 | -0.812049 | 5.153829e-51 | -8.615850e-47 |
| Msa0936390 | Msa1006010 | -0.819593 | 1.070662e-52 | -8.615850e-47 |
| Msa0958030 | Msa1006010 | -0.805391 | 1.365356e-49 | -8.615850e-47 |
| Msa0960390 | Msa1006010 | -0.850594 | 1.535237e-60 | -8.615850e-47 |
| Msa0969370 | Msa1006010 | -0.801551 | 8.535803e-49 | -8.615850e-47 |
| Msa0974950 | Msa1006010 | -0.818263 | 2.147573e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1006010 | MtrunA17_Chr7g0216561 | 100.000 | 101 | 0 | 0 | 30 | 130 | 177 | 277 | 3.90e-69 | 209 |
| Msa1006010 | MtrunA17_Chr7g0216561 | 96.552 | 29 | 1 | 0 | 1 | 29 | 1 | 29 | 4.66e-13 | 63.9 |
| Msa1006010 | MtrunA17_Chr6g0452811 | 68.317 | 101 | 32 | 0 | 30 | 130 | 178 | 278 | 8.66e-46 | 149 |
| Msa1006010 | MtrunA17_Chr8g0362621 | 57.426 | 101 | 43 | 0 | 30 | 130 | 176 | 276 | 5.48e-39 | 132 |
| Msa1006010 | MtrunA17_Chr5g0401201 | 48.000 | 100 | 52 | 0 | 31 | 130 | 177 | 276 | 1.35e-27 | 102 |
| Msa1006010 | MtrunA17_Chr4g0072511 | 44.554 | 101 | 55 | 1 | 31 | 130 | 179 | 279 | 9.04e-23 | 90.1 |
| Msa1006010 | MtrunA17_Chr1g0152591 | 40.000 | 100 | 60 | 0 | 31 | 130 | 178 | 277 | 1.54e-20 | 84.3 |
| Msa1006010 | MtrunA17_Chr4g0060181 | 40.816 | 98 | 57 | 1 | 34 | 130 | 147 | 244 | 6.20e-20 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1006010 | AT3G01280.1 | 61.386 | 101 | 39 | 0 | 30 | 130 | 176 | 276 | 5.05e-44 | 145 |
| Msa1006010 | AT5G15090.1 | 60.396 | 101 | 38 | 1 | 30 | 130 | 176 | 274 | 7.24e-41 | 137 |
| Msa1006010 | AT5G15090.2 | 60.396 | 101 | 38 | 1 | 30 | 130 | 176 | 274 | 7.24e-41 | 137 |
| Msa1006010 | AT5G57490.1 | 48.000 | 100 | 50 | 1 | 31 | 130 | 177 | 274 | 6.82e-28 | 103 |
| Msa1006010 | AT5G67500.3 | 46.000 | 100 | 54 | 0 | 31 | 130 | 177 | 276 | 1.83e-23 | 92.4 |
| Msa1006010 | AT5G67500.2 | 46.000 | 100 | 54 | 0 | 31 | 130 | 204 | 303 | 2.30e-23 | 92.4 |
| Msa1006010 | AT3G49920.1 | 42.000 | 100 | 58 | 0 | 31 | 130 | 127 | 226 | 1.18e-20 | 84.0 |
| Msa1006010 | AT5G67500.1 | 44.318 | 88 | 49 | 0 | 31 | 118 | 177 | 264 | 2.50e-18 | 79.0 |
Find 62 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGATGTTGATTCTCTTCT+TGG | 0.147123 | 7_1:-4602668 | Msa1006010:three_prime_UTR |
| AGAAAGGTTAGAAATAAATT+AGG | 0.182856 | 7_1:-4607415 | Msa1006010:five_prime_UTR |
| CAAGATAGATCAAAACTATC+AGG | 0.275931 | 7_1:+4602734 | None:intergenic |
| GAAATGGTGATGAGTGATTT+AGG | 0.306493 | 7_1:+4602822 | None:intergenic |
| ATTCACAGAAACATGATTCT+TGG | 0.320636 | 7_1:+4602383 | None:intergenic |
| TGCTGTATTTGAACTCTTGT+TGG | 0.342551 | 7_1:-4602351 | Msa1006010:three_prime_UTR |
| GTTAGAAATAAATTAGGGTT+CGG | 0.344296 | 7_1:-4607409 | Msa1006010:five_prime_UTR |
| TTAGAAATAAATTAGGGTTC+GGG | 0.353146 | 7_1:-4607408 | Msa1006010:five_prime_UTR |
| ATGAAATTGAGGTAGGCTTT+AGG | 0.354453 | 7_1:-4602709 | Msa1006010:three_prime_UTR |
| GAAAGGTTAGAAATAAATTA+GGG | 0.360417 | 7_1:-4607414 | Msa1006010:five_prime_UTR |
| TGCTAAGGTTGGATTGAGTT+TGG | 0.368402 | 7_1:-4602766 | Msa1006010:CDS |
| TTGATGTTGATTCTCTTCTT+GGG | 0.390960 | 7_1:-4602667 | Msa1006010:three_prime_UTR |
| GACGCCACTCGTGCTGGATA+AGG | 0.393225 | 7_1:+4602844 | None:intergenic |
| AAAGAGACTTGTTGAGCCTC+TGG | 0.414752 | 7_1:+4602550 | None:intergenic |
| ACGCCACTCGTGCTGGATAA+GGG | 0.420370 | 7_1:+4602845 | None:intergenic |
| AAGAAGTTATCTACTTCTGT+TGG | 0.430855 | 7_1:-4602282 | Msa1006010:three_prime_UTR |
| GGGCATTTAAGAGTAACATT+TGG | 0.432897 | 7_1:+4602571 | None:intergenic |
| TTCACAGAAACATGATTCTT+GGG | 0.441313 | 7_1:+4602384 | None:intergenic |
| GGCACTTGCCTTGGCTGAGT+TGG | 0.447115 | 7_1:+4602866 | None:intergenic |
| CACTGCTGTTGGTGTTGACA+TGG | 0.447929 | 7_1:-4602976 | Msa1006010:CDS |
| CAACCTTGTAGAAATAAAGT+AGG | 0.449236 | 7_1:-4602604 | Msa1006010:three_prime_UTR |
| ACTCAAAGAGTATCAATTCT+CGG | 0.455409 | 7_1:+4602520 | None:intergenic |
| GGTGTCTAGCTCAGTAGAAA+TGG | 0.457756 | 7_1:+4602806 | None:intergenic |
| CTGTTAGTGAGCGTTTGAAA+TGG | 0.467289 | 7_1:-4602421 | Msa1006010:three_prime_UTR |
| CTGGATAAGGGCACTTGCCT+TGG | 0.473358 | 7_1:+4602857 | None:intergenic |
| CGACCCTTCAATGTTGTCAA+TGG | 0.474649 | 7_1:+4602894 | None:intergenic |
| GAATCAAGCTATGGCTGCTA+AGG | 0.489854 | 7_1:-4607315 | Msa1006010:exon |
| AGAATAATGGAAAATTTCAA+TGG | 0.493195 | 7_1:+4602311 | None:intergenic |
| TCTATCTTGTCATGAAATTG+AGG | 0.493322 | 7_1:-4602720 | Msa1006010:three_prime_UTR |
| GGATCCATTGACAACATTGA+AGG | 0.493835 | 7_1:-4602898 | Msa1006010:CDS |
| TTAGCAGCCATAGCTTGATT+CGG | 0.496192 | 7_1:+4607317 | None:intergenic |
| TCTTGGGTAAGAAATGTTCA+AGG | 0.505272 | 7_1:-4602651 | Msa1006010:three_prime_UTR |
| CCAACAGCAGTGTTGGTCAC+GGG | 0.519304 | 7_1:+4602987 | None:intergenic |
| AAACCTACTTTATTTCTACA+AGG | 0.523937 | 7_1:+4602601 | None:intergenic |
| GCCGATGTCAGAGTAGAGAC+CGG | 0.550627 | 7_1:+4607289 | None:intergenic |
| TCTTGTCATGAAATTGAGGT+AGG | 0.553266 | 7_1:-4602716 | Msa1006010:three_prime_UTR |
| ACTTGGTGTCCAACATGCAT+TGG | 0.554631 | 7_1:-4602919 | Msa1006010:CDS |
| CCGATGTCAGAGTAGAGACC+GGG | 0.556425 | 7_1:+4607290 | None:intergenic |
| GTCAACACCAACAGCAGTGT+TGG | 0.558396 | 7_1:+4602980 | None:intergenic |
| AAGAGACTTGTTGAGCCTCT+GGG | 0.558634 | 7_1:+4602551 | None:intergenic |
| GATCCATTGACAACATTGAA+GGG | 0.562746 | 7_1:-4602897 | Msa1006010:CDS |
| CCCGGTCTCTACTCTGACAT+CGG | 0.568162 | 7_1:-4607290 | Msa1006010:CDS |
| GTTTCCACCGAATCAAGCTA+TGG | 0.571083 | 7_1:-4607324 | Msa1006010:exon |
| GCTATGGCTGCTAAGGGTCC+CGG | 0.572243 | 7_1:-4607308 | Msa1006010:CDS |
| ACCAACAGCAGTGTTGGTCA+CGG | 0.576428 | 7_1:+4602986 | None:intergenic |
| GCAGCCATAGCTTGATTCGG+TGG | 0.579818 | 7_1:+4607320 | None:intergenic |
| AAGATAGATCAAAACTATCA+GGG | 0.588944 | 7_1:+4602735 | None:intergenic |
| GGCCATTGAAAAGAGTGCTA+AGG | 0.593327 | 7_1:-4602781 | Msa1006010:CDS |
| ATTGAAAAGAGTGCTAAGGT+TGG | 0.595148 | 7_1:-4602777 | Msa1006010:CDS |
| TTTGTGTGCAGGAATGAGAA+AGG | 0.601343 | 7_1:-4603047 | Msa1006010:intron |
| GTGCCCTTATCCAGCACGAG+TGG | 0.606194 | 7_1:-4602848 | Msa1006010:CDS |
| CCCGTGACCAACACTGCTGT+TGG | 0.613752 | 7_1:-4602987 | Msa1006010:CDS |
| CAACAGCAGTGTTGGTCACG+GGG | 0.615828 | 7_1:+4602988 | None:intergenic |
| TCGTATCACCAACTCAGCCA+AGG | 0.624155 | 7_1:-4602874 | Msa1006010:CDS |
| TCAATGGATCCAATGCATGT+TGG | 0.627022 | 7_1:+4602910 | None:intergenic |
| AGAGAGAACAACTTCACACT+TGG | 0.632696 | 7_1:-4602936 | Msa1006010:CDS |
| AATCAAGCTATGGCTGCTAA+GGG | 0.637442 | 7_1:-4607314 | Msa1006010:exon |
| ACTGCTGTTGGTGTTGACAT+GGG | 0.661896 | 7_1:-4602975 | Msa1006010:CDS |
| TTCTACTGAGCTAGACACCA+AGG | 0.676467 | 7_1:-4602802 | Msa1006010:CDS |
| GACATCGGCAAGAAAGCCAG+AGG | 0.689867 | 7_1:-4607275 | Msa1006010:intron |
| TTTCAAACGCTCACTAACAG+CGG | 0.696831 | 7_1:+4602424 | None:intergenic |
| TGTTACTCTTAAATGCCCAG+AGG | 0.747944 | 7_1:-4602566 | Msa1006010:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAATGAAATTTGTAT+TGG | - | chr7_1:4602556-4602575 | Msa1006010:three_prime_UTR | 10.0% |
| !!! | TTTTTAATGAAATTTGTATT+GGG | - | chr7_1:4602557-4602576 | Msa1006010:three_prime_UTR | 10.0% |
| !!! | ATTTTTTATGAATTTTGTAA+TGG | - | chr7_1:4602699-4602718 | Msa1006010:three_prime_UTR | 10.0% |
| !!! | TTTTTTATGAATTTTGTAAT+GGG | - | chr7_1:4602700-4602719 | Msa1006010:three_prime_UTR | 10.0% |
| !!! | AAATTTTTTTTTTTGTTTGT+AGG | + | chr7_1:4603923-4603942 | None:intergenic | 10.0% |
| !!! | TGTTTTTTTAGTTGAAATTT+TGG | - | chr7_1:4602459-4602478 | Msa1006010:three_prime_UTR | 15.0% |
| !!! | TTGAAATTTTGGTTTTTTTT+TGG | - | chr7_1:4602470-4602489 | Msa1006010:three_prime_UTR | 15.0% |
| !!! | GTTTTTTTAATGATTTTGTA+TGG | - | chr7_1:4602584-4602603 | Msa1006010:three_prime_UTR | 15.0% |
| !!! | AAATTTTCGATTTTCATTTT+TGG | - | chr7_1:4602660-4602679 | Msa1006010:three_prime_UTR | 15.0% |
| !!! | AATTTTCGATTTTCATTTTT+GGG | - | chr7_1:4602661-4602680 | Msa1006010:three_prime_UTR | 15.0% |
| !!! | TTTGATTTTTTTTTTGTTGT+TGG | - | chr7_1:4602737-4602756 | Msa1006010:exon | 15.0% |
| !!! | TTGATTTTTTTTTTGTTGTT+GGG | - | chr7_1:4602738-4602757 | Msa1006010:exon | 15.0% |
| !!! | TTGCTATATATTTTTTTGAA+AGG | - | chr7_1:4603087-4603106 | Msa1006010:intron | 15.0% |
| !! | TTATTTGAAAATGAAAGAAA+TGG | - | chr7_1:4603133-4603152 | Msa1006010:intron | 15.0% |
| !!! | ATTTATGTTTTAACCATTTT+TGG | - | chr7_1:4603632-4603651 | Msa1006010:intron | 15.0% |
| !! | ATAATCTTCAAAAGTAAATA+AGG | + | chr7_1:4603996-4604015 | None:intergenic | 15.0% |
| !!! | TATTTACTTTTGAAGATTAT+TGG | - | chr7_1:4603996-4604015 | Msa1006010:intron | 15.0% |
| !!! | ATTTACTTTTGAAGATTATT+GGG | - | chr7_1:4603997-4604016 | Msa1006010:intron | 15.0% |
| !!! | TTTTGTTTATTTCATTTTCA+TGG | - | chr7_1:4604233-4604252 | Msa1006010:intron | 15.0% |
| !! | TTGACAAATTTATTTGATAA+AGG | - | chr7_1:4604634-4604653 | Msa1006010:intron | 15.0% |
| !!! | TTATTTCTAACCTTTCTTTT+TGG | + | chr7_1:4602256-4602275 | None:intergenic | 20.0% |
| !! | AGAAAGGTTAGAAATAAATT+AGG | - | chr7_1:4602259-4602278 | Msa1006010:three_prime_UTR | 20.0% |
| !! | GAAAGGTTAGAAATAAATTA+GGG | - | chr7_1:4602260-4602279 | Msa1006010:three_prime_UTR | 20.0% |
| !!! | TCTTTTGATGAAATTTGAAA+TGG | - | chr7_1:4602618-4602637 | Msa1006010:three_prime_UTR | 20.0% |
| !!! | CTTTTGATGAAATTTGAAAT+GGG | - | chr7_1:4602619-4602638 | Msa1006010:three_prime_UTR | 20.0% |
| !!! | TGATTTTTTTTTTGTTGTTG+GGG | - | chr7_1:4602739-4602758 | Msa1006010:exon | 20.0% |
| !! | TTACTTTATGTATGGTTAAT+TGG | - | chr7_1:4602765-4602784 | Msa1006010:CDS | 20.0% |
| !! | TGATGAAGTTAATAAAATCA+AGG | - | chr7_1:4603002-4603021 | Msa1006010:CDS | 20.0% |
| !!! | TTTTTTAGTTATTTGCTGAA+TGG | - | chr7_1:4603217-4603236 | Msa1006010:intron | 20.0% |
| !!! | ATGTATTTCTTTTGTTGAAA+AGG | - | chr7_1:4603325-4603344 | Msa1006010:intron | 20.0% |
| !!! | CATGTTATGTTCTTTAAAAT+GGG | - | chr7_1:4603359-4603378 | Msa1006010:intron | 20.0% |
| !!! | TAGATTGTAGTTTTTTTGTT+CGG | - | chr7_1:4603474-4603493 | Msa1006010:intron | 20.0% |
| !!! | TTTTTTGTTCGGATAAAAAA+TGG | - | chr7_1:4603485-4603504 | Msa1006010:intron | 20.0% |
| !!! | AATCAAGTTTAGTTTATACT+AGG | + | chr7_1:4603615-4603634 | None:intergenic | 20.0% |
| !! | GTTTATGTAATGTAATGTAT+CGG | - | chr7_1:4604912-4604931 | Msa1006010:intron | 20.0% |
| !! | AATTATTTATTGCTAAACAG+AGG | + | chr7_1:4604958-4604977 | None:intergenic | 20.0% |
| !! | ATAAAACAATTCAATGTCAA+AGG | + | chr7_1:4605275-4605294 | None:intergenic | 20.0% |
| !! | AAATTAATATTGACACATAG+CGG | - | chr7_1:4606149-4606168 | Msa1006010:intron | 20.0% |
| !!! | TAAATTTTCTTGTATGACTA+TGG | - | chr7_1:4607193-4607212 | Msa1006010:intron | 20.0% |
| !!! | AGAATAATGGAAAATTTCAA+TGG | + | chr7_1:4607366-4607385 | None:intergenic | 20.0% |
| ! | AAAATCTTGTCCAAAAAGAA+AGG | - | chr7_1:4602243-4602262 | Msa1006010:three_prime_UTR | 25.0% |
| ! | GTTAGAAATAAATTAGGGTT+CGG | - | chr7_1:4602265-4602284 | Msa1006010:three_prime_UTR | 25.0% |
| ! | TTAGAAATAAATTAGGGTTC+GGG | - | chr7_1:4602266-4602285 | Msa1006010:three_prime_UTR | 25.0% |
| !!! | TGTTTTGGTAAAATCTGTAA+TGG | - | chr7_1:4602505-4602524 | Msa1006010:three_prime_UTR | 25.0% |
| !!! | GTTTTGGTAAAATCTGTAAT+GGG | - | chr7_1:4602506-4602525 | Msa1006010:three_prime_UTR | 25.0% |
| !!! | ATGGGTTTTGTTTGTTTTAT+TGG | - | chr7_1:4602637-4602656 | Msa1006010:three_prime_UTR | 25.0% |
| !! | TGGTTTGATGAAATTTTTGA+TGG | - | chr7_1:4602790-4602809 | Msa1006010:CDS | 25.0% |
| !! | GGTTTGATGAAATTTTTGAT+GGG | - | chr7_1:4602791-4602810 | Msa1006010:CDS | 25.0% |
| ! | ATATAGCAAAAATGCAACTA+AGG | + | chr7_1:4603076-4603095 | None:intergenic | 25.0% |
| !! | GCATGTTATGTTCTTTAAAA+TGG | - | chr7_1:4603358-4603377 | Msa1006010:intron | 25.0% |
| !!! | TGTTCTTTAAAATGGGAAAA+AGG | - | chr7_1:4603366-4603385 | Msa1006010:intron | 25.0% |
| !!! | GTTCTTTAAAATGGGAAAAA+GGG | - | chr7_1:4603367-4603386 | Msa1006010:intron | 25.0% |
| ! | TAAAGAAACATTTAGGGAAA+AGG | + | chr7_1:4603532-4603551 | None:intergenic | 25.0% |
| ! | TGCAACTAAAGAAACATTTA+GGG | + | chr7_1:4603538-4603557 | None:intergenic | 25.0% |
| ! | TTGCAACTAAAGAAACATTT+AGG | + | chr7_1:4603539-4603558 | None:intergenic | 25.0% |
| ! | CTACTTGTAAAATCCAAAAA+TGG | + | chr7_1:4603648-4603667 | None:intergenic | 25.0% |
| ! | TTTAATGTAAATGCAAAGTC+TGG | - | chr7_1:4603693-4603712 | Msa1006010:intron | 25.0% |
| !!! | CATTTTTAGCTATAGTTTGT+TGG | - | chr7_1:4604159-4604178 | Msa1006010:intron | 25.0% |
| ! | ACAAAAAAAACCTAAAGTGA+AGG | + | chr7_1:4604219-4604238 | None:intergenic | 25.0% |
| ! | CACAGAAAATTATGCAAAAA+AGG | + | chr7_1:4604507-4604526 | None:intergenic | 25.0% |
| !! | TTTGCATAATTTTCTGTGTT+TGG | - | chr7_1:4604509-4604528 | Msa1006010:intron | 25.0% |
| ! | CACAGAAAATTATGCAAAAA+AGG | + | chr7_1:4604507-4604526 | None:intergenic | 25.0% |
| !! | TTTGCATAATTTTCTGTGTT+TGG | - | chr7_1:4604509-4604528 | Msa1006010:intron | 25.0% |
| ! | GTGAAAAGATTATAGGAATA+TGG | + | chr7_1:4605535-4605554 | None:intergenic | 25.0% |
| ! | CGAAAACTTATGATGTAAAA+TGG | + | chr7_1:4605688-4605707 | None:intergenic | 25.0% |
| !! | TTTGTTCTGTTTTATGAAAC+AGG | - | chr7_1:4605811-4605830 | Msa1006010:intron | 25.0% |
| ! | TTTCTTATGATACCAAACTT+AGG | - | chr7_1:4605954-4605973 | Msa1006010:intron | 25.0% |
| ! | TTCTTATGATACCAAACTTA+GGG | - | chr7_1:4605955-4605974 | Msa1006010:intron | 25.0% |
| ! | AGTAGAACTATCATATGTAA+TGG | + | chr7_1:4606125-4606144 | None:intergenic | 25.0% |
| ! | CAATAATGCACATTTAATCT+CGG | - | chr7_1:4606317-4606336 | Msa1006010:intron | 25.0% |
| ! | ACAAAAACAGGTATACTTAA+GGG | + | chr7_1:4606376-4606395 | None:intergenic | 25.0% |
| ! | TACAAAAACAGGTATACTTA+AGG | + | chr7_1:4606377-4606396 | None:intergenic | 25.0% |
| !! | TTTTGTGTTGGATTATAGTA+TGG | - | chr7_1:4606428-4606447 | Msa1006010:intron | 25.0% |
| ! | TTTGTGTTGGATTATAGTAT+GGG | - | chr7_1:4606429-4606448 | Msa1006010:intron | 25.0% |
| ! | ACAAAAACAGGTATACTTAA+GGG | + | chr7_1:4606376-4606395 | None:intergenic | 25.0% |
| ! | TACAAAAACAGGTATACTTA+AGG | + | chr7_1:4606377-4606396 | None:intergenic | 25.0% |
| ! | TTTGTGTTGGATTATAGTAT+GGG | - | chr7_1:4606429-4606448 | Msa1006010:intron | 25.0% |
| ! | ACAAAAACAGGTATACTTAA+GGG | + | chr7_1:4606376-4606395 | None:intergenic | 25.0% |
| ! | TACAAAAACAGGTATACTTA+AGG | + | chr7_1:4606377-4606396 | None:intergenic | 25.0% |
| ! | AAGATAGATCAAAACTATCA+GGG | + | chr7_1:4606942-4606961 | None:intergenic | 25.0% |
| !!! | AAACCTACTTTATTTCTACA+AGG | + | chr7_1:4607076-4607095 | None:intergenic | 25.0% |
| !! | ACTTCTTTTTGACAGAATAA+TGG | + | chr7_1:4607379-4607398 | None:intergenic | 25.0% |
| !!! | ATGGGTTTTGTTTGTTTTGT+TGG | - | chr7_1:4602524-4602543 | Msa1006010:three_prime_UTR | 30.0% |
| !!! | AATTTTGTAATGGGTACTGT+TGG | - | chr7_1:4602709-4602728 | Msa1006010:three_prime_UTR | 30.0% |
| ! | TGGGGTATTTACTTTATGTA+TGG | - | chr7_1:4602757-4602776 | Msa1006010:CDS | 30.0% |
| TTATGTATGGTTAATTGGTG+TGG | - | chr7_1:4602770-4602789 | Msa1006010:CDS | 30.0% | |
| ! | TTTTGTAGATCTGTTGTTCA+AGG | - | chr7_1:4602825-4602844 | Msa1006010:CDS | 30.0% |
| !! | TTCAGTGTTTAGCTTGTAAT+TGG | - | chr7_1:4602937-4602956 | Msa1006010:CDS | 30.0% |
| !! | TCAGTGTTTAGCTTGTAATT+GGG | - | chr7_1:4602938-4602957 | Msa1006010:CDS | 30.0% |
| AAACCACATAAACACAACAA+AGG | + | chr7_1:4603173-4603192 | None:intergenic | 30.0% | |
| !!! | TCTCTGTATGTTGTTTTAGT+TGG | - | chr7_1:4603266-4603285 | Msa1006010:intron | 30.0% |
| ATGTTTCTTTAGTTGCAAGA+TGG | - | chr7_1:4603541-4603560 | Msa1006010:intron | 30.0% | |
| CAAATATCAAAACGTGCTTT+AGG | - | chr7_1:4603970-4603989 | Msa1006010:intron | 30.0% | |
| !! | ACTTTTGAAGATTATTGGGT+CGG | - | chr7_1:4604001-4604020 | Msa1006010:intron | 30.0% |
| GTACAAAATTGCACAAATTC+AGG | - | chr7_1:4604132-4604151 | Msa1006010:intron | 30.0% | |
| CTACATTATAAGTGCAACAA+CGG | + | chr7_1:4604302-4604321 | None:intergenic | 30.0% | |
| AGGAAATCAATGCAAATTAC+AGG | + | chr7_1:4604421-4604440 | None:intergenic | 30.0% | |
| ! | TAGAAGTTGATCTATCAAGA+GGG | + | chr7_1:4604471-4604490 | None:intergenic | 30.0% |
| ! | ATAGAAGTTGATCTATCAAG+AGG | + | chr7_1:4604472-4604491 | None:intergenic | 30.0% |
| TTAATCGTTTCGGATTGTTA+TGG | - | chr7_1:4604743-4604762 | Msa1006010:intron | 30.0% | |
| AAAGCGATATGAATACAATG+TGG | + | chr7_1:4604804-4604823 | None:intergenic | 30.0% | |
| !! | ATTCATATCGCTTTTAAGTG+TGG | - | chr7_1:4604810-4604829 | Msa1006010:intron | 30.0% |
| !! | TTAGGTTGAAGTTTACGTAA+TGG | - | chr7_1:4604885-4604904 | Msa1006010:intron | 30.0% |
| ! | GTAGTTTTTGTTCTTCAACT+GGG | + | chr7_1:4605069-4605088 | None:intergenic | 30.0% |
| ! | TGTAGTTTTTGTTCTTCAAC+TGG | + | chr7_1:4605070-4605089 | None:intergenic | 30.0% |
| AGATAAGAACAGATTGACTA+GGG | + | chr7_1:4605334-4605353 | None:intergenic | 30.0% | |
| !! | CTTGTTTCTTTTGTTTCAAC+CGG | - | chr7_1:4605415-4605434 | Msa1006010:intron | 30.0% |
| TTTGCATGTAAAGGAAAAAC+CGG | + | chr7_1:4605437-4605456 | None:intergenic | 30.0% | |
| CACTTCAGTGAAAAGATTAT+AGG | + | chr7_1:4605542-4605561 | None:intergenic | 30.0% | |
| AACAAACAATTTAACAGCCA+TGG | + | chr7_1:4605797-4605816 | None:intergenic | 30.0% | |
| GAGCTAACAAAATCTAATGT+TGG | - | chr7_1:4605977-4605996 | Msa1006010:intron | 30.0% | |
| !! | TTTATCAAAGATGACTTGCT+TGG | - | chr7_1:4606007-4606026 | Msa1006010:intron | 30.0% |
| TTTCACACTAACATGAATGT+TGG | - | chr7_1:4606099-4606118 | Msa1006010:intron | 30.0% | |
| ! | AAACTGCAATTTTCCATGAT+TGG | - | chr7_1:4606294-4606313 | Msa1006010:intron | 30.0% |
| TGAACAATGTGTACAAAAAC+AGG | + | chr7_1:4606388-4606407 | None:intergenic | 30.0% | |
| CCAACACAAAAACAAAACAT+TGG | + | chr7_1:4606419-4606438 | None:intergenic | 30.0% | |
| !!! | CCAATGTTTTGTTTTTGTGT+TGG | - | chr7_1:4606416-4606435 | Msa1006010:intron | 30.0% |
| !!! | TTCCAATGTTTTGTTTGTGT+TGG | - | chr7_1:4606498-4606517 | Msa1006010:intron | 30.0% |
| ATCCAACACAAACAAAACAT+TGG | + | chr7_1:4606503-4606522 | None:intergenic | 30.0% | |
| GTTTGTGTTGGATTATAGTA+TGG | - | chr7_1:4606510-4606529 | Msa1006010:intron | 30.0% | |
| CAAGATAGATCAAAACTATC+AGG | + | chr7_1:4606943-4606962 | None:intergenic | 30.0% | |
| TCTATCTTGTCATGAAATTG+AGG | - | chr7_1:4606954-4606973 | Msa1006010:intron | 30.0% | |
| !! | TTTGATGTTGATTCTCTTCT+TGG | - | chr7_1:4607006-4607025 | Msa1006010:intron | 30.0% |
| !! | TTGATGTTGATTCTCTTCTT+GGG | - | chr7_1:4607007-4607026 | Msa1006010:intron | 30.0% |
| CAACCTTGTAGAAATAAAGT+AGG | - | chr7_1:4607070-4607089 | Msa1006010:intron | 30.0% | |
| !! | ACTCAAAGAGTATCAATTCT+CGG | + | chr7_1:4607157-4607176 | None:intergenic | 30.0% |
| TTCACAGAAACATGATTCTT+GGG | + | chr7_1:4607293-4607312 | None:intergenic | 30.0% | |
| ATTCACAGAAACATGATTCT+TGG | + | chr7_1:4607294-4607313 | None:intergenic | 30.0% | |
| AAGAAGTTATCTACTTCTGT+TGG | - | chr7_1:4607392-4607411 | Msa1006010:five_prime_UTR | 30.0% | |
| !! | TGGCTTAATAGATGCTGTTT+TGG | - | chr7_1:4602490-4602509 | Msa1006010:three_prime_UTR | 35.0% |
| ! | GTTCCTTTGTTGTGTTTATG+TGG | - | chr7_1:4603167-4603186 | Msa1006010:intron | 35.0% |
| ATATAATCAAAATGCCACCG+AGG | + | chr7_1:4603307-4603326 | None:intergenic | 35.0% | |
| !!! | GCTTATGTTTCTGTTGCTTT+TGG | - | chr7_1:4603389-4603408 | Msa1006010:intron | 35.0% |
| GTATGCTATTACTGTATGCA+AGG | - | chr7_1:4603750-4603769 | Msa1006010:intron | 35.0% | |
| CAAAGTAGAGTGTAGTTCAA+CGG | - | chr7_1:4603852-4603871 | Msa1006010:intron | 35.0% | |
| ! | TTGTGCAATTTTGTACTGCA+AGG | + | chr7_1:4604128-4604147 | None:intergenic | 35.0% |
| AAAAACCTAAAGTGAAGGCT+AGG | + | chr7_1:4604214-4604233 | None:intergenic | 35.0% | |
| ! | ATTCTATTTGATTTCCCAGC+AGG | - | chr7_1:4604322-4604341 | Msa1006010:intron | 35.0% |
| ! | TTCTATTTGATTTCCCAGCA+GGG | - | chr7_1:4604323-4604342 | Msa1006010:intron | 35.0% |
| ! | AAATTACAGGAAGCGCAAAA+AGG | + | chr7_1:4604408-4604427 | None:intergenic | 35.0% |
| !!! | CATTGATTTCCTTTCGCTTT+TGG | - | chr7_1:4604429-4604448 | Msa1006010:intron | 35.0% |
| !! | GCTTTTGGTGATTGATCTTT+GGG | - | chr7_1:4604444-4604463 | Msa1006010:intron | 35.0% |
| !! | GCTTCATAGACATTTGTTGT+TGG | - | chr7_1:4604536-4604555 | Msa1006010:intron | 35.0% |
| ! | GTTTATTGTCCACTTGTTGA+TGG | - | chr7_1:4604682-4604701 | Msa1006010:intron | 35.0% |
| AACCTTATTCCATCAACAAG+TGG | + | chr7_1:4604694-4604713 | None:intergenic | 35.0% | |
| GTATGCGTGTTTAATCGTTT+CGG | - | chr7_1:4604733-4604752 | Msa1006010:intron | 35.0% | |
| TATTGCAAAGTATGGGATAC+AGG | + | chr7_1:4604858-4604877 | None:intergenic | 35.0% | |
| GCATTCGTATTGCAAAGTAT+GGG | + | chr7_1:4604865-4604884 | None:intergenic | 35.0% | |
| AGCATTCGTATTGCAAAGTA+TGG | + | chr7_1:4604866-4604885 | None:intergenic | 35.0% | |
| ACTTTGCAATACGAATGCTT+AGG | - | chr7_1:4604867-4604886 | Msa1006010:intron | 35.0% | |
| ACATCATCAGGTACAAAGAA+AGG | - | chr7_1:4605017-4605036 | Msa1006010:intron | 35.0% | |
| AAAGAAAGGTGAACTGTTTG+TGG | - | chr7_1:4605031-4605050 | Msa1006010:intron | 35.0% | |
| AAGAAAGGTGAACTGTTTGT+GGG | - | chr7_1:4605032-4605051 | Msa1006010:intron | 35.0% | |
| TAGTTTGACAATTCTGTACG+AGG | + | chr7_1:4605166-4605185 | None:intergenic | 35.0% | |
| ! | ACCCTTAAGAGTGTGTTTAT+CGG | - | chr7_1:4605213-4605232 | Msa1006010:intron | 35.0% |
| ACCGATAAACACACTCTTAA+GGG | + | chr7_1:4605217-4605236 | None:intergenic | 35.0% | |
| AACCGATAAACACACTCTTA+AGG | + | chr7_1:4605218-4605237 | None:intergenic | 35.0% | |
| GAGATAAGAACAGATTGACT+AGG | + | chr7_1:4605335-4605354 | None:intergenic | 35.0% | |
| AAAGTACAAGAACTTTGGTC+TGG | + | chr7_1:4605461-4605480 | None:intergenic | 35.0% | |
| ! | GACCAAAGTTCTTGTACTTT+TGG | - | chr7_1:4605461-4605480 | Msa1006010:intron | 35.0% |
| ! | TGCCAAAAGTACAAGAACTT+TGG | + | chr7_1:4605466-4605485 | None:intergenic | 35.0% |
| ! | GTTCTGTTTTATGAAACAGG+TGG | - | chr7_1:4605814-4605833 | Msa1006010:intron | 35.0% |
| ! | GTCAACTTATCTGGTGTTTT+TGG | - | chr7_1:4605902-4605921 | Msa1006010:intron | 35.0% |
| ! | TTTTGTTAGCTCCCTAAGTT+TGG | + | chr7_1:4605969-4605988 | None:intergenic | 35.0% |
| ATGTGCATTATTGCCAATCA+TGG | + | chr7_1:4606310-4606329 | None:intergenic | 35.0% | |
| AAAACAGGTATACTTAAGGG+AGG | + | chr7_1:4606373-4606392 | None:intergenic | 35.0% | |
| TGAACAGTGAGTACAAAAAC+AGG | + | chr7_1:4606472-4606491 | None:intergenic | 35.0% | |
| TGAACAGTGAGTACAAAAAC+AGG | + | chr7_1:4606472-4606491 | None:intergenic | 35.0% | |
| CCAACGCAAAAACAAAACAT+TGG | + | chr7_1:4606585-4606604 | None:intergenic | 35.0% | |
| !!! | CCAATGTTTTGTTTTTGCGT+TGG | - | chr7_1:4606582-4606601 | Msa1006010:intron | 35.0% |
| !!! | TATGATTTGCTTTTGTGTGC+AGG | - | chr7_1:4606616-4606635 | Msa1006010:intron | 35.0% |
| GATCCATTGACAACATTGAA+GGG | - | chr7_1:4606777-4606796 | Msa1006010:intron | 35.0% | |
| ! | GAAATGGTGATGAGTGATTT+AGG | + | chr7_1:4606855-4606874 | None:intergenic | 35.0% |
| ! | AACCTTAGCACTCTTTTCAA+TGG | + | chr7_1:4606898-4606917 | None:intergenic | 35.0% |
| !! | ATTGAAAAGAGTGCTAAGGT+TGG | - | chr7_1:4606897-4606916 | Msa1006010:intron | 35.0% |
| TCTTGTCATGAAATTGAGGT+AGG | - | chr7_1:4606958-4606977 | Msa1006010:intron | 35.0% | |
| ATGAAATTGAGGTAGGCTTT+AGG | - | chr7_1:4606965-4606984 | Msa1006010:intron | 35.0% | |
| TCTTGGGTAAGAAATGTTCA+AGG | - | chr7_1:4607023-4607042 | Msa1006010:intron | 35.0% | |
| GGGCATTTAAGAGTAACATT+TGG | + | chr7_1:4607106-4607125 | None:intergenic | 35.0% | |
| ! | GACTGATACTTTTGATGCAA+TGG | - | chr7_1:4607227-4607246 | Msa1006010:intron | 35.0% |
| TGCTGTATTTGAACTCTTGT+TGG | - | chr7_1:4607323-4607342 | Msa1006010:exon | 35.0% | |
| TTAGCAGCCATAGCTTGATT+CGG | + | chr7_1:4602360-4602379 | None:intergenic | 40.0% | |
| AATCAAGCTATGGCTGCTAA+GGG | - | chr7_1:4602360-4602379 | Msa1006010:three_prime_UTR | 40.0% | |
| AGGTAGAAACAGTGAACTTC+TGG | + | chr7_1:4602864-4602883 | None:intergenic | 40.0% | |
| ATTCAACTCACAACTCCAGT+GGG | + | chr7_1:4602892-4602911 | None:intergenic | 40.0% | |
| AATTCAACTCACAACTCCAG+TGG | + | chr7_1:4602893-4602912 | None:intergenic | 40.0% | |
| AGGAGCTAGTTGAAGAAAAC+AGG | - | chr7_1:4603022-4603041 | Msa1006010:CDS | 40.0% | |
| GCAAGATGGAAATGAGATAC+TGG | - | chr7_1:4603555-4603574 | Msa1006010:intron | 40.0% | |
| CTATTACTGTATGCAAGGTC+TGG | - | chr7_1:4603755-4603774 | Msa1006010:intron | 40.0% | |
| AGTAGCTAGAGTGAGAACAT+TGG | - | chr7_1:4603826-4603845 | Msa1006010:intron | 40.0% | |
| GTCACTAAAGTCCTTGCTTT+CGG | - | chr7_1:4603897-4603916 | Msa1006010:intron | 40.0% | |
| !!! | TGCTCTGTTTTAGAGTGATC+TGG | - | chr7_1:4604043-4604062 | Msa1006010:intron | 40.0% |
| TGCTTGTGTACTCTGCATAT+AGG | - | chr7_1:4604066-4604085 | Msa1006010:intron | 40.0% | |
| TTAGATGCGTTCAGAACAGA+GGG | + | chr7_1:4604260-4604279 | None:intergenic | 40.0% | |
| ATTATAAGTGCAACAACGGC+AGG | + | chr7_1:4604298-4604317 | None:intergenic | 40.0% | |
| AAACCTAGTGCCAAAATGGT+AGG | + | chr7_1:4604363-4604382 | None:intergenic | 40.0% | |
| TGCAAAACCTAGTGCCAAAA+TGG | + | chr7_1:4604367-4604386 | None:intergenic | 40.0% | |
| GATCAATCACCAAAAGCGAA+AGG | + | chr7_1:4604441-4604460 | None:intergenic | 40.0% | |
| !! | CGCTTTTGGTGATTGATCTT+TGG | - | chr7_1:4604443-4604462 | Msa1006010:intron | 40.0% |
| ! | GTCCACTTGTTGATGGAATA+AGG | - | chr7_1:4604689-4604708 | Msa1006010:intron | 40.0% |
| AGACACTGTCTTCATTGTAG+CGG | - | chr7_1:4604778-4604797 | Msa1006010:intron | 40.0% | |
| GGATACAGGTTAGGAACATA+AGG | + | chr7_1:4604844-4604863 | None:intergenic | 40.0% | |
| CAAAGTATGGGATACAGGTT+AGG | + | chr7_1:4604853-4604872 | None:intergenic | 40.0% | |
| !! | TGTGTCTACTTTGAAGTCAG+CGG | + | chr7_1:4605093-4605112 | None:intergenic | 40.0% |
| GATAAACACACTCTTAAGGG+TGG | + | chr7_1:4605214-4605233 | None:intergenic | 40.0% | |
| !!! | TGGTCTGGTTTTGCATGTAA+AGG | + | chr7_1:4605446-4605465 | None:intergenic | 40.0% |
| CAGTGATAGTTGTGAAAAGC+TGG | + | chr7_1:4605584-4605603 | None:intergenic | 40.0% | |
| CTTATAATAGCCTTCACACC+AGG | + | chr7_1:4605621-4605640 | None:intergenic | 40.0% | |
| GATCTCTTCTTCTTACTCCA+TGG | - | chr7_1:4605777-4605796 | Msa1006010:intron | 40.0% | |
| CAATACTTGCATGACTATGC+TGG | - | chr7_1:4605842-4605861 | Msa1006010:intron | 40.0% | |
| AACCCAGTTGTCAACTTATC+TGG | - | chr7_1:4605893-4605912 | Msa1006010:intron | 40.0% | |
| ! | CACCAGATAAGTTGACAACT+GGG | + | chr7_1:4605898-4605917 | None:intergenic | 40.0% |
| ! | ACACCAGATAAGTTGACAAC+TGG | + | chr7_1:4605899-4605918 | None:intergenic | 40.0% |
| GGAACTAATGCTCTTGCATT+TGG | - | chr7_1:4605923-4605942 | Msa1006010:intron | 40.0% | |
| ACTAATGCTCTTGCATTTGG+TGG | - | chr7_1:4605926-4605945 | Msa1006010:intron | 40.0% | |
| TTTGTGTGCAGGAATGAGAA+AGG | - | chr7_1:4606627-4606646 | Msa1006010:intron | 40.0% | |
| AGAGAGAACAACTTCACACT+TGG | - | chr7_1:4606738-4606757 | Msa1006010:intron | 40.0% | |
| TCAATGGATCCAATGCATGT+TGG | + | chr7_1:4606767-4606786 | None:intergenic | 40.0% | |
| GGATCCATTGACAACATTGA+AGG | - | chr7_1:4606776-4606795 | Msa1006010:intron | 40.0% | |
| TGCTAAGGTTGGATTGAGTT+TGG | - | chr7_1:4606908-4606927 | Msa1006010:intron | 40.0% | |
| TGTTACTCTTAAATGCCCAG+AGG | - | chr7_1:4607108-4607127 | Msa1006010:intron | 40.0% | |
| TTTCAAACGCTCACTAACAG+CGG | + | chr7_1:4607253-4607272 | None:intergenic | 40.0% | |
| CTGTTAGTGAGCGTTTGAAA+TGG | - | chr7_1:4607253-4607272 | Msa1006010:intron | 40.0% | |
| GTTTCCACCGAATCAAGCTA+TGG | - | chr7_1:4602350-4602369 | Msa1006010:three_prime_UTR | 45.0% | |
| GAATCAAGCTATGGCTGCTA+AGG | - | chr7_1:4602359-4602378 | Msa1006010:three_prime_UTR | 45.0% | |
| GGAAGATTTGTGTGCTTCCT+CGG | - | chr7_1:4603287-4603306 | Msa1006010:intron | 45.0% | |
| TATGCTGTTACTGCGAAGTC+TGG | - | chr7_1:4603722-4603741 | Msa1006010:intron | 45.0% | |
| AGAGTGTAGTTCAACGGATC+AGG | - | chr7_1:4603858-4603877 | Msa1006010:intron | 45.0% | |
| GAGTGTAGTTCAACGGATCA+GGG | - | chr7_1:4603859-4603878 | Msa1006010:intron | 45.0% | |
| ACTTTAGTGACTTTGCCCTG+GGG | + | chr7_1:4603888-4603907 | None:intergenic | 45.0% | |
| GACTTTAGTGACTTTGCCCT+GGG | + | chr7_1:4603889-4603908 | None:intergenic | 45.0% | |
| TTGTTTGTAGGCCGAAAGCA+AGG | + | chr7_1:4603911-4603930 | None:intergenic | 45.0% | |
| !! | CACTCTAAAACAGAGCACCA+GGG | + | chr7_1:4604040-4604059 | None:intergenic | 45.0% |
| !! | TCACTCTAAAACAGAGCACC+AGG | + | chr7_1:4604041-4604060 | None:intergenic | 45.0% |
| TAGATGCGTTCAGAACAGAG+GGG | + | chr7_1:4604259-4604278 | None:intergenic | 45.0% | |
| GTTAGATGCGTTCAGAACAG+AGG | + | chr7_1:4604261-4604280 | None:intergenic | 45.0% | |
| AAATGGTAGGCAGGGGAAAA+GGG | + | chr7_1:4604350-4604369 | None:intergenic | 45.0% | |
| AAAATGGTAGGCAGGGGAAA+AGG | + | chr7_1:4604351-4604370 | None:intergenic | 45.0% | |
| ! | TTTTCCCCTGCCTACCATTT+TGG | - | chr7_1:4604350-4604369 | Msa1006010:intron | 45.0% |
| TAGTGCCAAAATGGTAGGCA+GGG | + | chr7_1:4604358-4604377 | None:intergenic | 45.0% | |
| CTCACTGTGTATTGTGCTAC+AGG | - | chr7_1:4604989-4605008 | Msa1006010:intron | 45.0% | |
| CTACAGGCTATCACATCATC+AGG | - | chr7_1:4605005-4605024 | Msa1006010:intron | 45.0% | |
| AAAGTTCCTGATCCAGCATC+TGG | - | chr7_1:4605645-4605664 | Msa1006010:intron | 45.0% | |
| AAGTTCCTGATCCAGCATCT+GGG | - | chr7_1:4605646-4605665 | Msa1006010:intron | 45.0% | |
| TATCTTACCTTCCCAGATGC+TGG | + | chr7_1:4605660-4605679 | None:intergenic | 45.0% | |
| CATGACTATGCTGGAGTAAG+CGG | - | chr7_1:4605851-4605870 | Msa1006010:intron | 45.0% | |
| !! | TGCGAAGTGTTGTCAAACAG+AGG | - | chr7_1:4606238-4606257 | Msa1006010:intron | 45.0% |
| !! | ACTGCTGTTGGTGTTGACAT+GGG | - | chr7_1:4606699-4606718 | Msa1006010:intron | 45.0% |
| !! | ACTTGGTGTCCAACATGCAT+TGG | - | chr7_1:4606755-4606774 | Msa1006010:intron | 45.0% |
| CGACCCTTCAATGTTGTCAA+TGG | + | chr7_1:4606783-4606802 | None:intergenic | 45.0% | |
| ! | GGTGTCTAGCTCAGTAGAAA+TGG | + | chr7_1:4606871-4606890 | None:intergenic | 45.0% |
| TTCTACTGAGCTAGACACCA+AGG | - | chr7_1:4606872-4606891 | Msa1006010:intron | 45.0% | |
| ! | AGCACTCTTTTCAATGGCCT+TGG | + | chr7_1:4606892-4606911 | None:intergenic | 45.0% |
| !! | GGCCATTGAAAAGAGTGCTA+AGG | - | chr7_1:4606893-4606912 | Msa1006010:intron | 45.0% |
| !! | AAGAGACTTGTTGAGCCTCT+GGG | + | chr7_1:4607126-4607145 | None:intergenic | 45.0% |
| !! | AAAGAGACTTGTTGAGCCTC+TGG | + | chr7_1:4607127-4607146 | None:intergenic | 45.0% |
| GAGAGAGAGAGAGAGAGAGA+GGG | + | chr7_1:4602433-4602452 | None:intergenic | 50.0% | |
| TGAGAGAGAGAGAGAGAGAG+AGG | + | chr7_1:4602434-4602453 | None:intergenic | 50.0% | |
| GTTTCTACCTACTCACCCAC+TGG | - | chr7_1:4602874-4602893 | Msa1006010:CDS | 50.0% | |
| AGATTTGTGTGCTTCCTCGG+TGG | - | chr7_1:4603290-4603309 | Msa1006010:intron | 50.0% | |
| !!! | GCTTTTGGTGCTTTGCTGTG+AGG | - | chr7_1:4603404-4603423 | Msa1006010:intron | 50.0% |
| GGACTTTAGTGACTTTGCCC+TGG | + | chr7_1:4603890-4603909 | None:intergenic | 50.0% | |
| ! | GCTAGCCTAGCCTTCACTTT+AGG | - | chr7_1:4604206-4604225 | Msa1006010:intron | 50.0% |
| GAACGCATCTAACTTCCCCT+TGG | - | chr7_1:4604268-4604287 | Msa1006010:intron | 50.0% | |
| AGTGCCAAAATGGTAGGCAG+GGG | + | chr7_1:4604357-4604376 | None:intergenic | 50.0% | |
| CTAGTGCCAAAATGGTAGGC+AGG | + | chr7_1:4604359-4604378 | None:intergenic | 50.0% | |
| !! | CTGCCTACCATTTTGGCACT+AGG | - | chr7_1:4604357-4604376 | Msa1006010:intron | 50.0% |
| !! | GGAAGCGCAAAAAGGCATCA+GGG | + | chr7_1:4604400-4604419 | None:intergenic | 50.0% |
| !! | AGGAAGCGCAAAAAGGCATC+AGG | + | chr7_1:4604401-4604420 | None:intergenic | 50.0% |
| CTGGAGTAAGCGGCAACATT+GGG | - | chr7_1:4605861-4605880 | Msa1006010:intron | 50.0% | |
| !! | ACCAACAGCAGTGTTGGTCA+CGG | + | chr7_1:4606691-4606710 | None:intergenic | 50.0% |
| GTCAACACCAACAGCAGTGT+TGG | + | chr7_1:4606697-4606716 | None:intergenic | 50.0% | |
| !! | CACTGCTGTTGGTGTTGACA+TGG | - | chr7_1:4606698-4606717 | Msa1006010:intron | 50.0% |
| TCGTATCACCAACTCAGCCA+AGG | - | chr7_1:4606800-4606819 | Msa1006010:intron | 50.0% | |
| !! | GCAGCCATAGCTTGATTCGG+TGG | + | chr7_1:4602357-4602376 | None:intergenic | 55.0% |
| CCGATGTCAGAGTAGAGACC+GGG | + | chr7_1:4602387-4602406 | None:intergenic | 55.0% | |
| CCCGGTCTCTACTCTGACAT+CGG | - | chr7_1:4602384-4602403 | Msa1006010:three_prime_UTR | 55.0% | |
| GCCGATGTCAGAGTAGAGAC+CGG | + | chr7_1:4602388-4602407 | None:intergenic | 55.0% | |
| GACATCGGCAAGAAAGCCAG+AGG | - | chr7_1:4602399-4602418 | Msa1006010:three_prime_UTR | 55.0% | |
| AGAGAGGGAGAAGCTACCTC+TGG | + | chr7_1:4602418-4602437 | None:intergenic | 55.0% | |
| CACAACTCCAGTGGGTGAGT+AGG | + | chr7_1:4602884-4602903 | None:intergenic | 55.0% | |
| TTAGTGACTTTGCCCTGGGG+TGG | + | chr7_1:4603885-4603904 | None:intergenic | 55.0% | |
| TTATTGGGTCGGCCCTGCAA+CGG | - | chr7_1:4604012-4604031 | Msa1006010:intron | 55.0% | |
| CTTCACACCAGGAGCAGGTT+CGG | + | chr7_1:4605610-4605629 | None:intergenic | 55.0% | |
| ATAGCCTTCACACCAGGAGC+AGG | + | chr7_1:4605615-4605634 | None:intergenic | 55.0% | |
| TCCTGATCCAGCATCTGGGA+AGG | - | chr7_1:4605650-4605669 | Msa1006010:intron | 55.0% | |
| ACCTTCCCAGATGCTGGATC+AGG | + | chr7_1:4605654-4605673 | None:intergenic | 55.0% | |
| GCTGGAGTAAGCGGCAACAT+TGG | - | chr7_1:4605860-4605879 | Msa1006010:intron | 55.0% | |
| !! | CAACAGCAGTGTTGGTCACG+GGG | + | chr7_1:4606689-4606708 | None:intergenic | 55.0% |
| !! | CCAACAGCAGTGTTGGTCAC+GGG | + | chr7_1:4606690-4606709 | None:intergenic | 55.0% |
| !! | CTGGATAAGGGCACTTGCCT+TGG | + | chr7_1:4606820-4606839 | None:intergenic | 55.0% |
| ACGCCACTCGTGCTGGATAA+GGG | + | chr7_1:4606832-4606851 | None:intergenic | 55.0% | |
| ! | ATTTAGGACGCCACTCGTGC+TGG | + | chr7_1:4606839-4606858 | None:intergenic | 55.0% |
| GCTATGGCTGCTAAGGGTCC+CGG | - | chr7_1:4602366-4602385 | Msa1006010:three_prime_UTR | 60.0% | |
| AGCACCAGGGATCCGTTGCA+GGG | + | chr7_1:4604027-4604046 | None:intergenic | 60.0% | |
| AACAACGGCAGGCGAGCCAA+GGG | + | chr7_1:4604287-4604306 | None:intergenic | 60.0% | |
| AGGGGAAAAGGGACCCTGCT+GGG | + | chr7_1:4604339-4604358 | None:intergenic | 60.0% | |
| ACTGTCACCGAACCTGCTCC+TGG | - | chr7_1:4605600-4605619 | Msa1006010:intron | 60.0% | |
| CGAACCTGCTCCTGGTGTGA+AGG | - | chr7_1:4605608-4605627 | Msa1006010:intron | 60.0% | |
| CCCGTGACCAACACTGCTGT+TGG | - | chr7_1:4606687-4606706 | Msa1006010:intron | 60.0% | |
| GGCACTTGCCTTGGCTGAGT+TGG | + | chr7_1:4606811-4606830 | None:intergenic | 60.0% | |
| GTGCCCTTATCCAGCACGAG+TGG | - | chr7_1:4606826-4606845 | Msa1006010:intron | 60.0% | |
| GACGCCACTCGTGCTGGATA+AGG | + | chr7_1:4606833-4606852 | None:intergenic | 60.0% | |
| AACGGATCAGGGCCACCCCA+GGG | - | chr7_1:4603870-4603889 | Msa1006010:intron | 65.0% | |
| GAGCACCAGGGATCCGTTGC+AGG | + | chr7_1:4604028-4604047 | None:intergenic | 65.0% | |
| ACAACGGCAGGCGAGCCAAG+GGG | + | chr7_1:4604286-4604305 | None:intergenic | 65.0% | |
| CAACAACGGCAGGCGAGCCA+AGG | + | chr7_1:4604288-4604307 | None:intergenic | 65.0% | |
| CAGGGGAAAAGGGACCCTGC+TGG | + | chr7_1:4604340-4604359 | None:intergenic | 65.0% | |
| CAACGGATCAGGGCCACCCC+AGG | - | chr7_1:4603869-4603888 | Msa1006010:intron | 70.0% | |
| TCGGCCCTGCAACGGATCCC+TGG | - | chr7_1:4604020-4604039 | Msa1006010:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 4602223 | 4607473 | 4602223 | ID=Msa1006010;Name=Msa1006010 |
| chr7_1 | mRNA | 4602223 | 4607473 | 4602223 | ID=Msa1006010-mRNA-1;Parent=Msa1006010;Name=Msa1006010-mRNA-1;_AED=0.15;_eAED=0.15;_QI=146|0.5|0.66|1|0.5|0.66|3|529|130 |
| chr7_1 | exon | 4602223 | 4603058 | 4602223 | ID=Msa1006010-mRNA-1:exon:1565;Parent=Msa1006010-mRNA-1 |
| chr7_1 | exon | 4606830 | 4606863 | 4606830 | ID=Msa1006010-mRNA-1:exon:1564;Parent=Msa1006010-mRNA-1 |
| chr7_1 | exon | 4607276 | 4607473 | 4607276 | ID=Msa1006010-mRNA-1:exon:1563;Parent=Msa1006010-mRNA-1 |
| chr7_1 | five_prime_UTR | 4607328 | 4607473 | 4607328 | ID=Msa1006010-mRNA-1:five_prime_utr;Parent=Msa1006010-mRNA-1 |
| chr7_1 | CDS | 4607276 | 4607327 | 4607276 | ID=Msa1006010-mRNA-1:cds;Parent=Msa1006010-mRNA-1 |
| chr7_1 | CDS | 4606830 | 4606863 | 4606830 | ID=Msa1006010-mRNA-1:cds;Parent=Msa1006010-mRNA-1 |
| chr7_1 | CDS | 4602752 | 4603058 | 4602752 | ID=Msa1006010-mRNA-1:cds;Parent=Msa1006010-mRNA-1 |
| chr7_1 | three_prime_UTR | 4602223 | 4602751 | 4602223 | ID=Msa1006010-mRNA-1:three_prime_utr;Parent=Msa1006010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
