AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0936380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0936380 MtrunA17_Chr6g0452171 96.396 777 28 0 1 777 500 1276 0.0 1546
Msa0936380 MtrunA17_Chr6g0452171 38.015 534 325 5 245 777 86 614 3.45e-110 364
Msa0936380 MtrunA17_Chr6g0452041 91.763 777 63 1 1 777 500 1275 0.0 1464
Msa0936380 MtrunA17_Chr6g0452041 36.441 590 357 6 183 763 20 600 1.10e-114 376
Msa0936380 MtrunA17_Chr6g0452141 90.476 777 70 2 1 777 501 1273 0.0 1396
Msa0936380 MtrunA17_Chr6g0452141 38.077 520 316 5 245 763 87 601 4.40e-110 363
Msa0936380 MtrunA17_Chr6g0452111 86.340 776 97 3 1 776 507 1273 0.0 1373
Msa0936380 MtrunA17_Chr6g0452111 38.577 534 322 5 245 777 93 621 8.25e-113 371
Msa0936380 MtrunA17_Chr6g0452061 84.556 777 108 4 1 777 21 785 0.0 1327
Msa0936380 MtrunA17_Chr6g0452061 64.486 107 37 1 657 763 16 121 1.39e-34 141
Msa0936380 MtrunA17_Chr6g0451881 82.519 778 121 4 1 777 500 1263 0.0 1300
Msa0936380 MtrunA17_Chr6g0451881 38.803 518 313 3 246 763 87 600 7.93e-114 374
Msa0936380 MtrunA17_Chr6g0451911 79.055 783 149 6 1 777 500 1273 0.0 1217
Msa0936380 MtrunA17_Chr6g0451911 36.486 518 325 3 246 763 87 600 1.10e-111 368
Msa0936380 MtrunA17_Chr7g0233901 66.580 766 232 4 1 764 496 1239 0.0 1043
Msa0936380 MtrunA17_Chr7g0233901 36.149 592 333 11 194 763 28 596 3.49e-104 347
Msa0936380 MtrunA17_Chr6g0452071 94.053 454 26 1 311 764 4 456 0.0 872
Msa0936380 MtrunA17_Chr6g0452071 60.784 102 39 1 1 101 354 455 6.55e-32 130
Msa0936380 MtrunA17_Chr4g0041871 55.065 770 334 6 1 763 482 1246 0.0 848
Msa0936380 MtrunA17_Chr4g0041871 34.783 575 355 9 200 763 20 585 1.55e-103 345
Msa0936380 MtrunA17_Chr3g0123411 54.545 770 331 8 1 763 388 1145 0.0 835
Msa0936380 MtrunA17_Chr3g0123411 38.189 508 305 5 274 777 1 503 5.60e-96 323
Msa0936380 MtrunA17_Chr3g0123411 65.714 105 35 1 1 104 1044 1148 2.51e-33 138
Msa0936380 MtrunA17_Chr6g0486841 51.571 764 346 5 1 762 498 1239 0.0 784
Msa0936380 MtrunA17_Chr6g0486841 38.973 526 304 8 243 762 83 597 2.45e-102 342
Msa0936380 MtrunA17_Chr7g0264631 43.226 775 424 6 1 770 565 1328 0.0 677
Msa0936380 MtrunA17_Chr7g0264631 37.582 612 373 6 157 762 57 665 2.41e-122 398
Msa0936380 MtrunA17_Chr5g0410921 45.349 774 374 8 1 764 495 1229 0.0 672
Msa0936380 MtrunA17_Chr5g0410921 36.816 603 367 7 173 766 7 604 1.77e-114 375
Msa0936380 MtrunA17_Chr5g0410921 63.551 107 39 0 1 107 1128 1234 2.00e-35 145
Msa0936380 MtrunA17_Chr6g0453051 44.805 770 396 8 1 764 502 1248 0.0 670
Msa0936380 MtrunA17_Chr6g0453051 39.189 592 351 5 174 762 15 600 1.11e-127 411
Msa0936380 MtrunA17_Chr1g0180601 43.959 778 421 7 1 773 538 1305 0.0 662
Msa0936380 MtrunA17_Chr1g0180601 38.938 565 340 3 200 762 77 638 7.96e-124 402
Msa0936380 MtrunA17_Chr4g0069401 44.386 766 417 6 1 762 512 1272 0.0 628
Msa0936380 MtrunA17_Chr4g0069401 35.714 616 385 9 153 763 3 612 1.65e-114 376
Msa0936380 MtrunA17_Chr2g0285191 44.329 767 411 8 1 762 537 1292 0.0 626
Msa0936380 MtrunA17_Chr2g0285191 37.598 641 351 8 162 763 7 637 1.12e-124 404
Msa0936380 MtrunA17_Chr2g0285191 64.706 102 36 0 1 102 1193 1294 1.13e-33 139
Msa0936380 MtrunA17_Chr2g0285311 43.709 771 411 9 1 762 508 1264 0.0 622
Msa0936380 MtrunA17_Chr2g0285311 39.130 598 355 4 165 762 19 607 4.93e-126 407
Msa0936380 MtrunA17_Chr2g0285311 62.745 102 38 0 1 102 1165 1266 4.56e-33 137
Msa0936380 MtrunA17_Chr4g0069411 43.320 771 419 6 1 766 535 1292 0.0 620
Msa0936380 MtrunA17_Chr4g0069411 35.880 602 376 8 165 763 41 635 5.66e-112 369
Msa0936380 MtrunA17_Chr4g0039821 42.194 775 418 11 1 762 515 1272 0.0 614
Msa0936380 MtrunA17_Chr4g0039821 35.563 613 387 7 154 763 8 615 2.65e-113 372
Msa0936380 MtrunA17_Chr6g0481921 43.450 771 413 9 1 762 410 1166 0.0 612
Msa0936380 MtrunA17_Chr6g0481921 42.771 498 277 7 267 762 18 509 6.10e-117 380
Msa0936380 MtrunA17_Chr6g0481921 65.686 102 35 0 1 102 1067 1168 7.83e-35 143
Msa0936380 MtrunA17_Chr1g0193991 43.839 771 409 8 1 762 528 1283 0.0 611
Msa0936380 MtrunA17_Chr1g0193991 37.793 598 365 5 168 762 34 627 1.28e-122 398
Msa0936380 MtrunA17_Chr4g0069361 42.248 774 421 9 1 763 517 1275 0.0 608
Msa0936380 MtrunA17_Chr4g0069361 35.073 613 390 6 154 763 10 617 6.54e-119 388
Msa0936380 MtrunA17_Chr4g0069351 42.448 768 426 8 1 762 517 1274 0.0 603
Msa0936380 MtrunA17_Chr4g0069351 35.237 613 389 7 154 763 10 617 2.10e-119 389
Msa0936380 MtrunA17_Chr2g0285301 43.264 772 414 8 1 762 503 1260 0.0 602
Msa0936380 MtrunA17_Chr2g0285301 38.063 599 362 5 170 763 9 603 7.93e-121 393
Msa0936380 MtrunA17_Chr3g0138211 42.362 779 405 8 1 767 535 1281 0.0 591
Msa0936380 MtrunA17_Chr3g0138211 36.079 607 363 10 168 762 41 634 1.45e-104 349
Msa0936380 MtrunA17_Chr1g0156821 41.919 761 402 9 3 763 513 1233 0.0 591
Msa0936380 MtrunA17_Chr1g0156821 35.596 604 376 7 173 773 23 616 4.30e-101 338
Msa0936380 MtrunA17_Chr1g0156821 60.550 109 43 0 1 109 1133 1241 1.55e-32 135
Msa0936380 MtrunA17_Chr3g0119381 42.913 769 415 8 1 759 538 1292 0.0 582
Msa0936380 MtrunA17_Chr3g0119381 35.479 606 381 7 163 763 38 638 8.55e-120 390
Msa0936380 MtrunA17_Chr8g0366481 43.029 581 325 4 183 763 51 625 5.33e-160 478
Msa0936380 MtrunA17_Chr8g0366481 70.297 101 30 0 1 101 525 625 2.18e-35 142
Msa0936380 MtrunA17_Chr8g0344651 38.392 771 434 10 1 759 737 1478 4.45e-158 497
Msa0936380 MtrunA17_Chr8g0344651 36.602 571 354 4 194 761 269 834 1.26e-121 399
Msa0936380 MtrunA17_Chr1g0212701 39.655 580 344 4 182 759 807 1382 6.98e-140 446
Msa0936380 MtrunA17_Chr1g0212701 33.675 585 377 6 175 759 60 633 2.80e-91 313
Msa0936380 MtrunA17_Chr1g0212701 52.577 97 45 1 5 101 542 637 1.16e-21 101
Msa0936380 MtrunA17_Chr1g0212701 53.846 104 43 3 1 103 1286 1385 5.14e-17 86.3
Msa0936380 MtrunA17_Chr7g0222781 37.874 602 363 5 165 759 793 1390 4.41e-139 444
Msa0936380 MtrunA17_Chr7g0222781 33.393 560 361 6 194 748 78 630 5.48e-91 312
Msa0936380 MtrunA17_Chr7g0222781 46.269 134 64 3 5 136 548 675 5.26e-24 108
Msa0936380 MtrunA17_Chr7g0222781 51.923 104 45 3 1 103 1294 1393 6.71e-17 85.9
Msa0936380 MtrunA17_Chr3g0128381 34.936 624 376 8 151 762 31 636 6.15e-128 395
Msa0936380 MtrunA17_Chr3g0128381 55.556 108 40 2 1 100 529 636 5.80e-26 114
Msa0936380 MtrunA17_Chr1g0194031 37.049 610 377 5 157 763 18 623 4.05e-125 396
Msa0936380 MtrunA17_Chr1g0194031 39.306 346 198 5 1 342 523 860 2.37e-69 245
Msa0936380 MtrunA17_Chr1g0194001 47.581 372 194 1 377 748 3 373 1.33e-115 354
Msa0936380 MtrunA17_Chr1g0194001 75.581 86 21 0 1 86 287 372 2.78e-35 138
Msa0936380 MtrunA17_Chr4g0061601 34.872 585 360 11 184 758 48 621 7.00e-105 335
Msa0936380 MtrunA17_Chr4g0061601 60.417 96 37 1 1 96 527 621 7.43e-29 122
Msa0936380 MtrunA17_Chr6g0474071 37.644 433 212 5 375 758 25 448 8.17e-84 274
Msa0936380 MtrunA17_Chr6g0474071 57.292 96 40 1 1 96 354 448 1.39e-25 110
Msa0936380 MtrunA17_Chr6g0452081 53.247 231 102 2 497 727 3 227 1.32e-79 255
Msa0936380 MtrunA17_Chr6g0452081 98.485 66 1 0 1 66 162 227 6.07e-34 130
Msa0936380 MtrunA17_Chr5g0412741 35.178 506 298 11 270 762 208 696 1.05e-75 259
Msa0936380 MtrunA17_Chr5g0412741 56.731 104 40 2 1 100 594 696 1.46e-23 106
Msa0936380 MtrunA17_Chr7g0227391 32.638 527 326 11 248 762 155 664 4.28e-74 254
Msa0936380 MtrunA17_Chr7g0227391 57.282 103 40 2 1 100 563 664 4.59e-25 111
Msa0936380 MtrunA17_Chr6g0452051 31.719 413 277 4 242 653 4 412 4.02e-68 231
Msa0936380 MtrunA17_Chr1g0178481 30.057 529 325 11 247 750 107 615 4.15e-63 223
Msa0936380 MtrunA17_Chr1g0178481 47.368 95 50 0 1 95 520 614 6.25e-17 85.1
Msa0936380 MtrunA17_Chr5g0433051 30.978 552 329 14 248 769 179 708 2.30e-61 220
Msa0936380 MtrunA17_Chr5g0433051 53.409 88 41 0 1 88 603 690 2.45e-21 99.4
Msa0936380 MtrunA17_Chr8g0366451 31.401 414 279 4 241 653 36 445 1.25e-60 211
Msa0936380 MtrunA17_Chr3g0128391 32.225 391 257 6 265 653 2 386 6.07e-57 204
Msa0936380 MtrunA17_Chr3g0128391 68.224 107 32 1 656 762 448 552 7.75e-37 146
Msa0936380 MtrunA17_Chr3g0128391 69.000 100 30 1 1 100 454 552 1.01e-34 140
Msa0936380 MtrunA17_Chr5g0433071 33.623 461 272 13 310 758 261 699 4.19e-55 202
Msa0936380 MtrunA17_Chr5g0433071 54.545 88 40 0 1 88 605 692 2.35e-21 99.4
Msa0936380 MtrunA17_Chr8g0353541 24.938 802 473 27 1 752 333 1055 5.07e-50 190
Msa0936380 MtrunA17_Chr8g0353541 25.116 430 277 12 352 767 39 437 1.06e-24 110
Msa0936380 MtrunA17_Chr2g0295911 24.081 789 494 21 1 751 766 1487 5.69e-50 190
Msa0936380 MtrunA17_Chr2g0295911 28.571 231 148 3 521 750 641 855 2.02e-20 97.4
Msa0936380 MtrunA17_Chr2g0295911 33.981 103 67 1 2 104 1399 1500 8.75e-11 65.9
Msa0936380 MtrunA17_Chr1g0195691 25.064 786 493 22 1 751 775 1499 1.02e-49 189
Msa0936380 MtrunA17_Chr1g0195691 29.183 257 162 4 498 750 624 864 4.99e-23 105
Msa0936380 MtrunA17_Chr1g0195691 33.981 103 67 1 2 104 1411 1512 3.52e-12 70.5
Msa0936380 MtrunA17_Chr8g0341811 23.681 777 489 22 1 752 562 1259 1.32e-48 186
Msa0936380 MtrunA17_Chr8g0341811 23.913 414 274 12 352 752 268 653 5.85e-21 99.0
Msa0936380 MtrunA17_Chr8g0341811 35.417 96 61 1 2 97 1170 1264 1.91e-11 68.2
Msa0936380 MtrunA17_Chr8g0337191 25.032 791 511 25 1 759 732 1472 1.21e-47 183
Msa0936380 MtrunA17_Chr8g0337191 25.831 391 258 11 366 749 455 820 1.34e-24 110
Msa0936380 MtrunA17_Chr8g0337191 33.981 103 68 0 2 104 1377 1479 2.44e-14 77.4
Msa0936380 MtrunA17_Chr6g0463201 23.688 781 497 26 1 752 750 1460 1.63e-47 182
Msa0936380 MtrunA17_Chr6g0463201 25.735 408 256 10 370 763 476 850 3.86e-26 115
Msa0936380 MtrunA17_Chr6g0463201 36.082 97 62 0 2 98 1371 1467 5.57e-14 76.3
Msa0936380 MtrunA17_Chr8g0337121 24.905 791 512 26 1 759 752 1492 2.53e-47 182
Msa0936380 MtrunA17_Chr8g0337121 25.385 390 261 10 366 749 475 840 7.66e-25 111
Msa0936380 MtrunA17_Chr8g0337121 33.981 103 68 0 2 104 1397 1499 2.31e-14 77.8
Msa0936380 MtrunA17_Chr8g0341751 24.020 791 494 21 1 752 549 1271 1.46e-44 173
Msa0936380 MtrunA17_Chr8g0341751 24.942 429 271 13 352 763 255 649 1.86e-24 110
Msa0936380 MtrunA17_Chr6g0463121 22.589 788 497 25 1 752 745 1455 1.47e-44 174
Msa0936380 MtrunA17_Chr6g0463121 25.490 459 285 13 323 764 428 846 1.35e-26 117
Msa0936380 MtrunA17_Chr6g0463121 35.052 97 63 0 2 98 1366 1462 3.51e-14 77.0
Msa0936380 MtrunA17_Chr2g0285731 24.112 788 500 27 1 753 741 1465 3.26e-44 172
Msa0936380 MtrunA17_Chr2g0285731 28.692 237 153 4 515 750 609 830 1.04e-23 107
Msa0936380 MtrunA17_Chr2g0285731 36.792 106 67 0 1 106 1374 1479 1.77e-11 68.2
Msa0936380 MtrunA17_Chr1g0183191 24.596 805 493 25 1 752 768 1511 1.19e-43 171
Msa0936380 MtrunA17_Chr1g0183191 24.191 587 378 19 195 760 325 865 1.70e-27 120
Msa0936380 MtrunA17_Chr1g0183191 32.407 108 73 0 2 109 1422 1529 6.00e-13 73.2
Msa0936380 MtrunA17_Chr6g0463141 22.333 806 503 27 1 752 744 1480 2.15e-43 170
Msa0936380 MtrunA17_Chr6g0463141 26.592 267 141 5 515 748 613 857 4.48e-21 99.4
Msa0936380 MtrunA17_Chr6g0463141 30.928 97 67 0 2 98 1391 1487 3.09e-12 70.9
Msa0936380 MtrunA17_Chr8g0341851 23.402 782 504 23 1 752 731 1447 4.97e-43 169
Msa0936380 MtrunA17_Chr8g0341851 22.642 477 324 13 290 752 377 822 2.50e-20 97.1
Msa0936380 MtrunA17_Chr8g0341851 34.375 96 63 0 2 97 1358 1453 1.91e-12 71.2
Msa0936380 MtrunA17_Chr7g0262191 24.345 801 504 26 1 752 764 1511 7.92e-43 168
Msa0936380 MtrunA17_Chr7g0262191 27.446 419 264 11 366 774 487 875 4.82e-29 125
Msa0936380 MtrunA17_Chr7g0262191 31.068 103 71 0 2 104 1422 1524 6.23e-12 69.7
Msa0936380 MtrunA17_Chr3g0101441 24.813 802 513 31 1 767 557 1303 1.52e-42 167
Msa0936380 MtrunA17_Chr3g0101441 26.995 426 256 12 364 766 278 671 1.08e-23 107
Msa0936380 MtrunA17_Chr8g0366471 68.182 110 34 1 656 765 20 128 2.27e-42 150
Msa0936380 MtrunA17_Chr8g0366471 68.269 104 33 0 1 104 26 129 5.35e-42 149
Msa0936380 MtrunA17_Chr3g0080941 24.813 802 485 31 1 759 742 1468 9.77e-42 165
Msa0936380 MtrunA17_Chr3g0080941 27.237 257 160 8 494 746 594 827 6.42e-21 99.0
Msa0936380 MtrunA17_Chr3g0080941 37.755 98 61 0 1 98 1372 1469 5.16e-11 66.6
Msa0936380 MtrunA17_Chr3g0101481 24.324 777 510 27 1 747 749 1477 6.29e-41 162
Msa0936380 MtrunA17_Chr3g0101481 25.714 420 260 12 345 751 459 839 1.67e-24 110
Msa0936380 MtrunA17_Chr3g0101481 33.019 106 71 0 2 107 1393 1498 1.26e-12 72.0
Msa0936380 MtrunA17_Chr6g0463131 22.911 790 492 23 1 752 746 1456 1.11e-40 161
Msa0936380 MtrunA17_Chr6g0463131 26.667 465 290 13 322 771 428 856 1.88e-32 135
Msa0936380 MtrunA17_Chr6g0463131 31.959 97 66 0 2 98 1367 1463 1.42e-12 71.6
Msa0936380 MtrunA17_Chr6g0471281 22.922 794 487 25 1 752 746 1456 4.22e-38 153
Msa0936380 MtrunA17_Chr6g0471281 25.217 460 293 11 322 767 428 850 1.92e-28 123
Msa0936380 MtrunA17_Chr6g0471281 31.250 96 66 0 2 97 1367 1462 1.54e-11 68.6
Msa0936380 MtrunA17_Chr2g0295921 35.319 235 144 4 519 751 1271 1499 3.25e-37 150
Msa0936380 MtrunA17_Chr2g0295921 27.706 231 150 3 521 750 653 867 5.86e-20 95.9
Msa0936380 MtrunA17_Chr2g0295921 33.981 103 67 1 2 104 1411 1512 7.92e-11 66.2
Msa0936380 MtrunA17_Chr2g0295901 34.894 235 145 4 519 751 1256 1484 2.93e-36 147
Msa0936380 MtrunA17_Chr2g0295901 30.583 206 126 4 546 750 666 855 7.68e-20 95.5
Msa0936380 MtrunA17_Chr2g0295901 33.981 103 67 1 2 104 1396 1497 5.39e-11 66.6
Msa0936380 MtrunA17_Chr2g0333911 35.319 235 145 4 519 752 772 1000 1.33e-35 145
Msa0936380 MtrunA17_Chr2g0333911 31.280 211 125 6 537 744 176 369 2.91e-19 93.2
Msa0936380 MtrunA17_Chr2g0333911 35.714 98 63 0 1 98 910 1007 4.93e-14 76.3
Msa0936380 MtrunA17_Chr2g0333911 21.130 407 272 13 1 400 285 649 1.46e-13 74.7
Msa0936380 MtrunA17_Chr6g0463391 24.399 541 343 15 242 752 136 640 2.03e-35 143
Msa0936380 MtrunA17_Chr6g0463391 32.632 95 64 0 4 98 553 647 1.63e-12 71.2
Msa0936380 MtrunA17_Chr8g0376961 33.745 243 154 5 519 760 1196 1432 4.42e-35 144
Msa0936380 MtrunA17_Chr8g0376961 24.890 454 272 13 321 748 390 800 4.38e-27 118
Msa0936380 MtrunA17_Chr8g0376961 34.579 107 70 0 2 108 1336 1442 1.89e-13 74.7
Msa0936380 MtrunA17_Chr8g0376961 36.957 92 57 1 1 91 713 804 9.62e-11 65.9
Msa0936380 MtrunA17_Chr8g0363771 35.319 235 144 4 519 751 1256 1484 5.77e-35 144
Msa0936380 MtrunA17_Chr8g0363771 28.571 231 148 3 521 750 636 850 2.26e-20 97.1
Msa0936380 MtrunA17_Chr8g0353781 34.746 236 146 4 519 752 1209 1438 1.00e-34 143
Msa0936380 MtrunA17_Chr8g0353781 24.429 438 270 13 352 767 430 828 8.45e-24 108
Msa0936380 MtrunA17_Chr8g0353781 22.892 415 264 13 1 404 724 1093 1.26e-13 75.1
Msa0936380 MtrunA17_Chr5g0412941 31.064 235 156 4 519 752 83 312 1.53e-34 134
Msa0936380 MtrunA17_Chr5g0412941 31.731 104 71 0 2 105 223 326 2.98e-13 71.6
Msa0936380 MtrunA17_Chr6g0463181 24.845 483 314 16 293 752 983 1439 1.55e-34 142
Msa0936380 MtrunA17_Chr6g0463181 24.654 434 284 8 330 748 414 819 2.55e-27 119
Msa0936380 MtrunA17_Chr6g0463181 31.959 97 66 0 2 98 1350 1446 2.22e-12 71.2
Msa0936380 MtrunA17_Chr8g0341761 34.746 236 146 4 519 752 1203 1432 1.91e-34 142
Msa0936380 MtrunA17_Chr8g0341761 24.286 420 265 12 352 752 427 812 2.08e-23 107
Msa0936380 MtrunA17_Chr8g0341761 35.354 99 62 2 1 98 721 818 4.71e-11 67.0
Msa0936380 MtrunA17_Chr8g0359291 23.875 511 328 15 268 752 162 637 2.58e-34 139
Msa0936380 MtrunA17_Chr8g0359291 30.928 97 67 0 2 98 548 644 1.66e-11 67.8
Msa0936380 MtrunA17_Chr1g0202221 24.895 474 296 14 293 752 935 1362 8.38e-34 140
Msa0936380 MtrunA17_Chr1g0202221 24.222 450 291 14 326 763 433 844 5.13e-23 105
Msa0936380 MtrunA17_Chr1g0202221 30.928 97 67 0 2 98 1273 1369 1.73e-11 68.2
Msa0936380 MtrunA17_Chr5g0445741 31.489 235 155 4 519 752 1249 1478 3.21e-33 138
Msa0936380 MtrunA17_Chr5g0445741 26.531 539 319 20 261 764 360 856 7.11e-25 111
Msa0936380 MtrunA17_Chr5g0445741 31.731 104 71 0 2 105 1389 1492 1.06e-12 72.0
Msa0936380 MtrunA17_Chr3g0085281 32.099 243 158 5 519 760 1219 1455 4.37e-33 137
Msa0936380 MtrunA17_Chr3g0085281 25.682 440 284 12 323 748 396 806 4.43e-28 122
Msa0936380 MtrunA17_Chr3g0085281 31.132 106 73 0 2 107 1359 1464 2.20e-12 71.2
Msa0936380 MtrunA17_Chr3g0085281 32.308 130 76 3 1 121 719 845 1.82e-11 68.2
Msa0936380 MtrunA17_Chr6g0463211 31.646 237 153 5 518 752 1297 1526 4.50e-33 137
Msa0936380 MtrunA17_Chr6g0463211 27.416 445 256 13 330 747 465 869 2.49e-26 116
Msa0936380 MtrunA17_Chr6g0463211 32.990 97 65 0 2 98 1437 1533 2.15e-12 71.2
Msa0936380 MtrunA17_Chr5g0412721 31.064 235 156 4 519 752 1244 1473 1.40e-32 136
Msa0936380 MtrunA17_Chr5g0412721 27.251 411 257 11 364 764 467 845 2.62e-25 113
Msa0936380 MtrunA17_Chr5g0412721 32.692 104 70 0 2 105 1384 1487 5.25e-13 73.2
Msa0936380 MtrunA17_Chr3g0101461 25.169 445 292 14 339 764 879 1301 4.09e-32 134
Msa0936380 MtrunA17_Chr3g0101461 28.070 285 173 6 498 766 403 671 4.75e-23 105
Msa0936380 MtrunA17_Chr3g0101461 33.333 96 64 0 2 97 1200 1295 3.87e-11 67.0
Msa0936380 MtrunA17_Chr6g0484351 26.938 516 328 18 263 752 147 639 5.02e-32 132
Msa0936380 MtrunA17_Chr6g0484351 35.417 96 61 1 2 97 550 644 2.06e-11 67.4
Msa0936380 MtrunA17_Chr6g0472531 28.626 262 175 5 498 752 1150 1406 7.23e-32 134
Msa0936380 MtrunA17_Chr6g0472531 32.000 250 151 5 515 763 565 796 8.30e-26 114
Msa0936380 MtrunA17_Chr6g0472531 32.110 109 69 1 2 105 1317 1425 4.93e-13 73.2
Msa0936380 MtrunA17_Chr6g0463151 30.213 235 158 4 519 752 1044 1273 9.77e-32 133
Msa0936380 MtrunA17_Chr6g0463151 24.516 465 282 11 322 763 245 663 6.86e-26 114
Msa0936380 MtrunA17_Chr6g0463151 30.275 109 75 1 2 110 1184 1291 5.40e-12 69.7
Msa0936380 MtrunA17_Chr5g0445671 30.638 235 157 4 519 752 858 1087 3.02e-31 131
Msa0936380 MtrunA17_Chr5g0445671 24.699 498 308 15 295 769 17 470 2.44e-25 112
Msa0936380 MtrunA17_Chr5g0445671 30.928 97 67 0 2 98 998 1094 2.91e-11 67.4
Msa0936380 MtrunA17_Chr3g0080981 33.333 243 153 5 519 759 1232 1467 3.98e-31 131
Msa0936380 MtrunA17_Chr3g0080981 22.680 485 296 17 296 750 396 831 1.63e-20 97.4
Msa0936380 MtrunA17_Chr8g0341801 33.475 236 149 4 519 752 185 414 1.71e-30 125
Msa0936380 MtrunA17_Chr8g0341801 35.484 93 59 1 5 97 328 419 3.45e-11 66.2
Msa0936380 MtrunA17_Chr8g0393151 34.906 212 114 4 538 739 35 232 5.29e-30 119
Msa0936380 MtrunA17_Chr5g0445701 30.932 236 151 5 531 760 7 236 1.13e-29 118
Msa0936380 MtrunA17_Chr3g0101471 27.823 248 173 4 518 764 1057 1299 1.33e-29 126
Msa0936380 MtrunA17_Chr3g0101471 23.873 599 388 19 195 766 112 669 9.07e-25 111
Msa0936380 MtrunA17_Chr3g0101471 35.417 96 62 0 2 97 1198 1293 4.89e-12 70.1
Msa0936380 MtrunA17_Chr2g0285231 68.831 77 24 0 11 87 25 101 3.75e-29 112
Msa0936380 MtrunA17_Chr2g0285231 64.474 76 27 0 672 747 25 100 9.62e-26 102
Msa0936380 MtrunA17_Chr5g0412921 25.229 547 343 18 225 751 325 825 1.30e-26 117
Msa0936380 MtrunA17_Chr5g0412921 36.782 87 54 1 1 86 735 821 3.89e-11 67.0
Msa0936380 MtrunA17_Chr2g0300791 33.566 143 87 2 173 313 3 139 1.73e-22 94.7
Msa0936380 MtrunA17_Chr6g0463401 27.665 394 221 14 330 698 435 789 2.16e-22 103
Msa0936380 MtrunA17_Chr7g0249091 36.145 249 121 12 521 743 86 322 4.01e-22 98.6
Msa0936380 MtrunA17_Chr8g0341791 32.353 170 109 3 599 767 16 180 1.44e-19 91.3
Msa0936380 MtrunA17_Chr1g0202431 33.755 237 123 11 531 750 44 263 1.90e-18 90.1
Msa0936380 MtrunA17_Chr6g0484361 24.682 393 234 14 352 720 434 788 1.28e-17 87.8
Msa0936380 MtrunA17_Chr1g0176451 31.276 243 151 11 538 771 23 258 1.44e-17 87.0
Msa0936380 MtrunA17_Chr3g0130211 29.487 234 140 7 521 748 36 250 1.89e-17 83.2
Msa0936380 MtrunA17_Chr8g0359931 30.041 243 154 9 537 771 65 299 3.32e-17 85.9
Msa0936380 MtrunA17_Chr1g0176441 31.855 248 142 12 538 771 171 405 4.50e-17 85.9
Msa0936380 MtrunA17_Chr6g0452091 24.876 201 146 3 252 450 22 219 4.02e-15 75.9
Msa0936380 MtrunA17_Chr7g0257341 28.295 258 171 9 513 766 545 792 1.66e-14 78.2
Msa0936380 MtrunA17_Chr7g0267971 26.721 247 156 11 538 771 160 394 1.99e-14 77.4
Msa0936380 MtrunA17_Chr8g0349441 27.273 198 124 2 503 700 27 204 4.47e-14 72.0
Msa0936380 MtrunA17_Chr4g0065231 34.286 210 112 9 553 746 90 289 5.75e-14 75.9
Msa0936380 MtrunA17_Chr6g0477811 33.654 208 121 8 547 744 75 275 8.48e-14 75.1
Msa0936380 MtrunA17_Chr4g0060401 23.707 232 164 6 530 756 619 842 1.08e-13 75.1
Msa0936380 MtrunA17_Chr7g0263351 31.429 210 128 10 549 748 138 341 2.30e-13 73.9
Msa0936380 MtrunA17_Chr1g0198931 27.830 212 141 6 538 741 107 314 2.98e-13 73.6
Msa0936380 MtrunA17_Chr5g0408061 27.381 252 157 11 538 776 65 303 3.95e-13 73.2
Msa0936380 MtrunA17_Chr3g0093091 23.276 232 165 6 530 756 626 849 4.37e-13 73.2
Msa0936380 MtrunA17_Chr1g0213091 31.100 209 130 9 549 748 133 336 4.84e-13 72.8
Msa0936380 MtrunA17_Chr8g0384391 29.469 207 124 9 553 748 71 266 6.95e-13 72.4
Msa0936380 MtrunA17_Chr4g0060431 23.504 234 162 7 530 756 606 829 1.20e-12 71.6
Msa0936380 MtrunA17_Chr1g0199471 28.241 216 142 8 513 721 493 702 1.86e-12 71.2
Msa0936380 MtrunA17_Chr1g0208391 29.493 217 134 8 537 741 92 301 2.12e-12 70.9
Msa0936380 MtrunA17_Chr4g0039261 31.034 203 123 8 538 733 51 243 3.10e-12 70.1
Msa0936380 MtrunA17_Chr4g0060421 23.707 232 164 6 530 756 141 364 3.35e-12 69.3
Msa0936380 MtrunA17_Chr4g0039251 32.701 211 117 11 534 733 89 285 3.40e-12 70.1
Msa0936380 MtrunA17_Chr3g0102731 26.860 242 161 9 538 771 98 331 3.48e-12 69.7
Msa0936380 MtrunA17_Chr2g0285211 33.333 105 70 0 446 550 14 118 3.63e-12 63.9
Msa0936380 MtrunA17_Chr2g0318061 26.400 250 162 11 538 776 31 269 3.73e-12 68.9
Msa0936380 MtrunA17_Chr8g0393191 30.622 209 127 10 549 746 80 281 3.81e-12 70.1
Msa0936380 MtrunA17_Chr5g0446901 28.774 212 141 6 538 741 109 318 5.94e-12 69.3
Msa0936380 MtrunA17_Chr5g0411621 31.343 201 127 9 549 742 62 258 9.31e-12 68.6
Msa0936380 MtrunA17_Chr2g0316301 27.706 231 151 9 522 742 56 280 9.34e-12 68.6
Msa0936380 MtrunA17_Chr4g0060471 23.415 205 147 5 554 756 1 197 1.15e-11 66.2
Msa0936380 MtrunA17_Chr3g0130331 31.188 202 119 8 553 742 73 266 1.17e-11 68.2
Msa0936380 MtrunA17_Chr4g0050261 30.151 199 115 7 538 722 73 261 1.32e-11 68.2
Msa0936380 MtrunA17_Chr4g0060501 22.269 238 171 6 523 756 617 844 1.80e-11 68.2
Msa0936380 MtrunA17_Chr8g0371961 34.524 84 55 0 537 620 17 100 1.81e-11 62.0
Msa0936380 MtrunA17_Chr4g0050251 29.464 224 132 8 538 745 73 286 1.90e-11 67.8
Msa0936380 MtrunA17_Chr4g0050221 29.911 224 141 7 532 744 25 243 4.99e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0936380 AT3G28345.1 71.762 772 175 6 1 762 498 1236 0.0 1110
Msa0936380 AT3G28345.1 38.542 576 340 7 194 763 31 598 9.59e-118 384
Msa0936380 AT3G28415.1 65.714 770 229 3 1 763 477 1218 0.0 1038
Msa0936380 AT3G28415.1 37.500 568 335 8 200 762 24 576 8.15e-111 365
Msa0936380 AT3G28415.1 62.500 104 38 1 1 103 1117 1220 4.47e-32 134
Msa0936380 AT3G28415.2 65.714 770 229 3 1 763 485 1226 0.0 1037
Msa0936380 AT3G28415.2 37.391 575 334 8 200 762 24 584 1.72e-112 370
Msa0936380 AT3G28415.2 62.500 104 38 1 1 103 1125 1228 4.57e-32 134
Msa0936380 AT3G28380.1 65.400 763 241 4 1 763 498 1237 0.0 1023
Msa0936380 AT3G28380.1 38.475 577 339 7 194 763 31 598 1.41e-114 376
Msa0936380 AT3G28390.1 65.662 763 236 4 1 763 486 1222 0.0 1017
Msa0936380 AT3G28390.1 38.316 582 333 12 194 763 19 586 5.69e-116 379
Msa0936380 AT3G28360.1 64.921 764 244 5 1 764 485 1224 0.0 1005
Msa0936380 AT3G28360.1 37.543 578 342 9 194 763 18 584 1.42e-112 370
Msa0936380 AT3G28860.1 44.993 769 392 7 1 762 504 1248 0.0 671
Msa0936380 AT3G28860.1 38.071 591 359 4 174 762 17 602 1.17e-121 395
Msa0936380 AT3G28860.1 59.223 103 42 0 1 103 1149 1251 1.66e-30 130
Msa0936380 AT1G02520.1 43.912 772 415 8 1 767 520 1278 0.0 653
Msa0936380 AT1G02520.1 41.431 531 283 8 243 762 106 619 5.58e-119 388
Msa0936380 AT1G02520.2 43.912 772 415 8 1 767 520 1278 0.0 653
Msa0936380 AT1G02520.2 41.431 531 283 8 243 762 106 619 5.58e-119 388
Msa0936380 AT1G02520.3 43.912 772 415 8 1 767 520 1278 0.0 653
Msa0936380 AT1G02520.3 41.431 531 283 8 243 762 106 619 5.58e-119 388
Msa0936380 AT2G36910.1 44.061 783 393 8 1 763 507 1264 0.0 649
Msa0936380 AT2G36910.1 37.056 591 366 4 175 762 20 607 1.25e-117 385
Msa0936380 AT1G10680.1 43.099 768 388 8 1 764 500 1222 0.0 649
Msa0936380 AT1G10680.1 37.353 597 363 7 169 762 11 599 3.03e-117 383
Msa0936380 AT4G25960.1 45.170 766 383 10 1 764 540 1270 0.0 648
Msa0936380 AT4G25960.1 36.968 587 357 6 200 777 79 661 4.45e-116 380
Msa0936380 AT1G27940.2 44.882 762 391 5 1 762 296 1028 0.0 643
Msa0936380 AT1G27940.2 44.361 399 216 4 365 762 1 394 6.26e-100 332
Msa0936380 AT1G27940.2 59.406 101 41 0 1 101 929 1029 7.75e-31 130
Msa0936380 AT1G27940.1 44.882 762 391 5 1 762 510 1242 0.0 642
Msa0936380 AT1G27940.1 37.279 566 346 6 200 762 49 608 1.20e-113 373
Msa0936380 AT1G27940.1 59.406 101 41 0 1 101 1143 1243 9.30e-31 130
Msa0936380 AT2G47000.6 44.544 779 395 7 1 762 523 1281 0.0 640
Msa0936380 AT2G47000.6 37.031 586 360 7 181 764 46 624 1.05e-114 377
Msa0936380 AT2G47000.6 67.647 102 33 0 1 102 1182 1283 1.88e-35 145
Msa0936380 AT2G47000.5 44.544 779 395 7 1 762 523 1281 0.0 640
Msa0936380 AT2G47000.5 37.031 586 360 7 181 764 46 624 1.05e-114 377
Msa0936380 AT2G47000.5 67.647 102 33 0 1 102 1182 1283 1.88e-35 145
Msa0936380 AT2G47000.1 44.544 779 395 7 1 762 523 1281 0.0 640
Msa0936380 AT2G47000.1 37.031 586 360 7 181 764 46 624 1.05e-114 377
Msa0936380 AT2G47000.1 67.647 102 33 0 1 102 1182 1283 1.88e-35 145
Msa0936380 AT3G62150.3 45.538 762 403 7 1 762 542 1291 0.0 636
Msa0936380 AT3G62150.3 38.143 603 362 9 177 775 58 653 4.21e-123 400
Msa0936380 AT3G62150.2 45.538 762 403 7 1 762 542 1291 0.0 636
Msa0936380 AT3G62150.2 38.143 603 362 9 177 775 58 653 4.21e-123 400
Msa0936380 AT3G62150.1 45.538 762 403 7 1 762 542 1291 0.0 636
Msa0936380 AT3G62150.1 38.143 603 362 9 177 775 58 653 4.21e-123 400
Msa0936380 AT1G02530.1 43.389 779 417 12 1 767 507 1273 0.0 629
Msa0936380 AT1G02530.1 36.624 628 361 11 167 773 13 624 1.15e-112 371
Msa0936380 AT1G28010.1 44.882 762 392 5 1 762 511 1244 0.0 625
Msa0936380 AT1G28010.1 37.279 566 346 6 200 762 50 609 3.11e-114 375
Msa0936380 AT1G28010.1 59.406 101 41 0 1 101 1145 1245 6.46e-30 128
Msa0936380 AT4G01830.1 42.950 773 401 6 1 767 492 1230 0.0 595
Msa0936380 AT4G01830.1 37.542 594 366 4 170 762 2 591 2.42e-122 397
Msa0936380 AT4G01830.2 42.950 773 401 6 1 767 258 996 0.0 595
Msa0936380 AT4G01830.2 50.578 346 168 2 417 762 15 357 6.66e-102 337
Msa0936380 AT4G01820.1 42.651 762 413 6 1 762 487 1224 0.0 590
Msa0936380 AT4G01820.1 37.562 607 366 9 176 776 2 601 4.17e-114 374
Msa0936380 AT1G10680.2 42.433 707 359 7 1 703 500 1162 0.0 586
Msa0936380 AT1G10680.2 37.353 597 363 7 169 762 11 599 1.68e-117 382
Msa0936380 AT5G46540.1 41.022 763 433 6 1 761 496 1243 0.0 568
Msa0936380 AT5G46540.1 40.070 569 329 7 199 763 36 596 9.94e-133 425
Msa0936380 AT5G46540.1 65.385 104 36 0 1 104 1145 1248 2.20e-33 139
Msa0936380 AT4G18050.1 43.081 766 405 9 1 762 494 1232 0.0 566
Msa0936380 AT4G18050.1 39.292 565 337 5 200 763 35 594 5.84e-120 390
Msa0936380 AT4G18050.1 68.269 104 33 0 1 104 1133 1236 1.62e-35 145
Msa0936380 AT4G18050.2 43.081 766 405 9 1 762 504 1242 0.0 566
Msa0936380 AT4G18050.2 39.292 565 337 5 200 763 45 604 7.90e-120 390
Msa0936380 AT4G18050.2 68.269 104 33 0 1 104 1143 1246 1.69e-35 145
Msa0936380 AT2G47000.2 40.902 665 357 6 1 648 523 1168 4.78e-157 488
Msa0936380 AT2G47000.2 37.031 586 360 7 181 764 46 624 3.53e-115 376
Msa0936380 AT2G39480.2 39.562 594 346 6 171 759 628 1213 2.01e-142 450
Msa0936380 AT2G39480.2 35.269 465 295 4 287 751 1 459 2.34e-85 295
Msa0936380 AT2G39480.2 53.608 97 44 1 5 101 374 469 2.26e-22 103
Msa0936380 AT2G39480.2 49.524 105 51 2 1 104 1117 1220 2.61e-16 84.3
Msa0936380 AT2G39480.1 39.562 594 346 6 171 759 808 1393 6.13e-141 450
Msa0936380 AT2G39480.1 32.624 564 368 6 194 751 82 639 4.99e-88 304
Msa0936380 AT2G39480.1 53.608 97 44 1 5 101 554 649 2.09e-22 103
Msa0936380 AT2G39480.1 49.524 105 51 2 1 104 1297 1400 2.22e-16 84.7
Msa0936380 AT3G55320.1 39.262 596 349 6 169 759 807 1394 1.24e-138 444
Msa0936380 AT3G55320.1 31.833 600 395 7 169 762 59 650 3.79e-90 310
Msa0936380 AT3G55320.1 51.485 101 48 1 1 101 552 651 1.85e-22 104
Msa0936380 AT3G55320.1 50.962 104 46 3 1 103 1298 1397 9.38e-16 82.4
Msa0936380 AT2G47000.3 37.031 586 360 7 181 764 46 624 1.86e-116 376
Msa0936380 AT2G47000.3 37.657 478 263 5 1 461 523 982 1.07e-95 320
Msa0936380 AT2G47000.7 37.031 586 360 7 181 764 46 624 1.86e-116 376
Msa0936380 AT2G47000.7 37.657 478 263 5 1 461 523 982 1.07e-95 320
Msa0936380 AT4G01820.2 37.562 607 366 9 176 776 2 601 6.37e-116 374
Msa0936380 AT4G01820.2 35.931 462 273 5 1 462 487 925 1.22e-86 295
Msa0936380 AT2G47000.4 38.095 567 316 5 1 550 523 1071 1.01e-115 376
Msa0936380 AT2G47000.4 37.158 584 358 7 181 762 46 622 2.06e-115 375
Msa0936380 AT1G02530.2 36.624 628 361 11 167 773 13 624 1.05e-114 370
Msa0936380 AT1G02530.2 37.931 464 266 10 1 453 507 959 9.34e-93 311
Msa0936380 AT5G39040.1 34.694 588 365 9 184 762 57 634 1.73e-93 306
Msa0936380 AT5G39040.1 57.000 100 42 1 1 100 536 634 1.36e-28 122
Msa0936380 AT1G70610.2 33.945 545 307 14 236 762 5 514 3.13e-82 272
Msa0936380 AT1G70610.2 53.211 109 43 3 1 105 412 516 1.34e-23 105
Msa0936380 AT1G70610.1 33.160 576 348 12 206 762 138 695 9.10e-81 273
Msa0936380 AT1G70610.1 53.211 109 43 3 1 105 593 697 2.49e-23 106
Msa0936380 AT4G25450.3 33.766 539 299 10 274 763 12 541 4.84e-80 267
Msa0936380 AT4G25450.3 56.436 101 43 1 1 101 442 541 1.25e-25 112
Msa0936380 AT4G25450.1 34.387 538 297 9 274 763 181 710 6.14e-78 266
Msa0936380 AT4G25450.1 56.436 101 43 1 1 101 611 710 2.13e-25 112
Msa0936380 AT4G28620.1 34.125 463 259 11 313 762 245 674 3.19e-63 224
Msa0936380 AT4G28620.1 53.488 86 40 0 1 86 576 661 2.34e-20 96.7
Msa0936380 AT5G58270.1 31.550 542 315 15 252 769 212 721 7.48e-62 222
Msa0936380 AT5G58270.1 47.222 108 56 1 1 108 616 722 1.79e-20 97.1
Msa0936380 AT4G28630.1 43.750 288 152 5 478 762 392 672 4.11e-61 219
Msa0936380 AT4G28630.1 49.425 87 44 0 1 87 574 660 2.52e-19 93.6
Msa0936380 AT5G03910.1 44.928 276 147 4 474 748 350 621 3.29e-58 209
Msa0936380 AT5G03910.1 48.421 95 49 0 1 95 536 630 2.04e-17 87.0
Msa0936380 AT2G47800.1 25.718 801 479 28 1 751 766 1500 3.09e-50 191
Msa0936380 AT2G47800.1 29.870 231 145 4 521 750 641 855 6.31e-21 99.4
Msa0936380 AT3G13090.1 25.063 798 475 27 1 752 726 1446 1.89e-47 183
Msa0936380 AT3G13090.1 21.162 671 415 24 127 751 214 816 2.78e-18 90.9
Msa0936380 AT3G13090.1 35.417 96 62 0 2 97 1357 1452 5.31e-13 73.6
Msa0936380 AT1G04120.3 23.965 797 513 21 1 752 712 1460 1.37e-45 177
Msa0936380 AT1G04120.3 24.726 457 245 9 319 760 437 809 1.24e-25 114
Msa0936380 AT1G04120.3 31.068 103 71 0 2 104 1371 1473 2.26e-12 71.6
Msa0936380 AT1G04120.1 23.965 797 513 21 1 752 747 1495 1.55e-45 177
Msa0936380 AT1G04120.1 25.380 461 272 10 319 760 437 844 3.32e-27 119
Msa0936380 AT1G04120.1 31.068 103 71 0 2 104 1406 1508 1.99e-12 71.6
Msa0936380 AT1G30400.2 24.808 782 501 24 1 752 740 1464 3.87e-45 176
Msa0936380 AT1G30400.2 30.172 232 146 5 521 751 614 830 6.23e-24 108
Msa0936380 AT1G30400.2 37.736 106 66 0 1 106 1374 1479 8.09e-11 66.6
Msa0936380 AT1G30400.1 24.808 782 501 24 1 752 740 1464 3.87e-45 176
Msa0936380 AT1G30400.1 30.172 232 146 5 521 751 614 830 6.23e-24 108
Msa0936380 AT1G30400.1 37.736 106 66 0 1 106 1374 1479 8.09e-11 66.6
Msa0936380 AT2G34660.3 25.063 790 495 26 1 752 453 1183 3.22e-44 173
Msa0936380 AT2G34660.3 30.172 232 144 5 521 750 327 542 1.52e-23 107
Msa0936380 AT2G34660.3 38.776 98 60 0 1 98 1092 1189 3.73e-11 67.4
Msa0936380 AT2G34660.1 24.844 801 483 26 1 752 740 1470 3.71e-44 173
Msa0936380 AT2G34660.1 30.043 233 145 5 521 751 614 830 1.60e-23 107
Msa0936380 AT2G34660.1 38.776 98 60 0 1 98 1379 1476 2.75e-11 68.2
Msa0936380 AT2G34660.2 24.844 801 483 26 1 752 740 1470 3.71e-44 173
Msa0936380 AT2G34660.2 30.043 233 145 5 521 751 614 830 1.60e-23 107
Msa0936380 AT2G34660.2 38.776 98 60 0 1 98 1379 1476 2.75e-11 68.2
Msa0936380 AT1G04120.2 24.216 797 506 23 1 752 747 1490 4.70e-44 172
Msa0936380 AT1G04120.2 25.380 461 272 10 319 760 437 844 2.86e-27 119
Msa0936380 AT1G04120.2 31.068 103 71 0 2 104 1401 1503 2.04e-12 71.6
Msa0936380 AT3G62700.1 23.786 824 491 27 1 751 764 1523 8.44e-44 172
Msa0936380 AT3G62700.1 28.139 231 149 3 521 750 639 853 4.39e-21 99.8
Msa0936380 AT4G25450.2 29.571 443 258 9 274 668 181 617 6.90e-42 162
Msa0936380 AT3G13080.1 24.116 792 501 28 1 752 765 1496 1.11e-41 165
Msa0936380 AT3G13080.1 32.680 153 99 2 600 751 706 855 3.45e-18 90.5
Msa0936380 AT3G13080.1 33.333 108 72 0 2 109 1407 1514 7.46e-13 73.2
Msa0936380 AT1G30410.5 23.899 795 502 28 1 759 626 1353 3.88e-41 163
Msa0936380 AT1G30410.5 29.060 234 144 6 521 750 500 715 8.22e-20 95.5
Msa0936380 AT1G30410.2 23.899 795 502 28 1 759 741 1468 6.46e-41 162
Msa0936380 AT1G30410.2 29.060 234 144 6 521 750 615 830 8.33e-20 95.9
Msa0936380 AT1G30410.6 23.899 795 502 28 1 759 741 1468 6.46e-41 162
Msa0936380 AT1G30410.6 29.060 234 144 6 521 750 615 830 8.33e-20 95.9
Msa0936380 AT1G30410.4 23.899 795 502 28 1 759 741 1468 6.46e-41 162
Msa0936380 AT1G30410.4 29.060 234 144 6 521 750 615 830 8.33e-20 95.9
Msa0936380 AT1G30410.1 23.899 795 502 28 1 759 744 1471 7.66e-41 162
Msa0936380 AT1G30410.1 29.060 234 144 6 521 750 618 833 9.01e-20 95.5
Msa0936380 AT3G13080.5 23.810 777 488 28 1 735 765 1479 1.01e-39 159
Msa0936380 AT3G13080.5 32.680 153 99 2 600 751 706 855 3.11e-18 90.5
Msa0936380 AT5G39040.2 27.983 461 315 8 184 635 57 509 2.91e-39 153
Msa0936380 AT1G30420.1 25.686 510 333 16 272 759 983 1468 8.54e-37 150
Msa0936380 AT1G30420.1 22.479 476 309 17 296 751 396 831 3.45e-19 93.6
Msa0936380 AT3G59140.1 26.263 495 298 16 278 739 961 1421 8.22e-36 147
Msa0936380 AT3G59140.1 25.180 417 260 12 364 763 446 827 1.35e-25 114
Msa0936380 AT3G59140.1 29.907 107 75 0 2 108 1345 1451 2.34e-13 74.7
Msa0936380 AT3G21250.2 34.855 241 146 5 519 757 1213 1444 1.97e-35 145
Msa0936380 AT3G21250.2 24.235 425 277 9 364 775 443 835 5.34e-23 105
Msa0936380 AT3G21250.5 34.855 241 146 5 519 757 1208 1439 2.00e-35 145
Msa0936380 AT3G21250.5 23.765 425 268 10 364 775 449 830 7.45e-20 95.9
Msa0936380 AT3G21250.4 34.855 241 146 5 519 757 1219 1450 2.01e-35 145
Msa0936380 AT3G21250.4 24.235 425 277 9 364 775 449 841 5.93e-23 105
Msa0936380 AT3G21250.1 34.855 241 146 5 519 757 1202 1433 2.10e-35 145
Msa0936380 AT3G21250.1 23.765 425 268 10 364 775 443 824 7.64e-20 95.9
Msa0936380 AT3G21250.6 34.855 241 146 5 519 757 797 1028 2.52e-35 145
Msa0936380 AT3G21250.6 28.514 249 159 4 528 775 189 419 2.51e-21 100
Msa0936380 AT3G21250.3 34.855 241 146 5 519 757 797 1028 2.52e-35 145
Msa0936380 AT3G21250.3 28.514 249 159 4 528 775 189 419 2.51e-21 100
Msa0936380 AT3G60160.3 26.305 498 318 16 277 752 976 1446 9.71e-35 143
Msa0936380 AT3G60160.3 25.434 519 339 15 246 749 322 807 1.84e-24 110
Msa0936380 AT3G60160.3 34.286 105 69 0 2 106 1357 1461 5.23e-15 80.1
Msa0936380 AT3G60160.3 32.812 128 71 3 1 113 719 846 3.52e-12 70.9
Msa0936380 AT3G60160.1 26.305 498 318 16 277 752 1012 1482 1.15e-34 143
Msa0936380 AT3G60160.1 24.565 517 346 13 246 749 358 843 2.14e-24 110
Msa0936380 AT3G60160.1 34.286 105 69 0 2 106 1393 1497 4.97e-15 80.1
Msa0936380 AT3G60160.1 32.812 128 71 3 1 113 755 882 3.30e-12 70.9
Msa0936380 AT3G13100.2 24.954 545 340 16 238 752 718 1223 1.18e-34 143
Msa0936380 AT3G13100.2 26.866 335 206 11 439 751 277 594 4.01e-18 90.1
Msa0936380 AT3G13100.2 35.417 96 62 0 2 97 1134 1229 6.22e-13 73.2
Msa0936380 AT3G13100.1 24.954 545 340 16 238 752 963 1468 1.76e-34 142
Msa0936380 AT3G13100.1 26.866 335 206 11 439 751 522 839 2.92e-18 90.9
Msa0936380 AT3G13100.1 35.417 96 62 0 2 97 1379 1474 4.61e-13 73.9
Msa0936380 AT3G60970.1 25.904 498 320 15 277 752 559 1029 8.99e-33 137
Msa0936380 AT3G60970.1 26.877 413 270 9 344 749 40 427 1.36e-28 123
Msa0936380 AT3G60970.1 34.286 105 69 0 2 106 940 1044 6.88e-15 79.7
Msa0936380 AT3G60970.1 39.326 89 53 1 1 88 339 427 5.17e-12 70.1
Msa0936380 AT3G13080.2 23.194 789 487 28 1 752 765 1471 1.07e-31 134
Msa0936380 AT3G13080.2 32.680 153 99 2 600 751 706 855 3.35e-18 90.5
Msa0936380 AT3G13080.2 33.333 108 72 0 2 109 1382 1489 7.55e-13 73.2
Msa0936380 AT2G07680.6 23.954 526 362 14 242 752 815 1317 4.30e-31 132
Msa0936380 AT2G07680.6 25.761 427 270 12 327 742 301 691 1.52e-25 114
Msa0936380 AT2G07680.6 36.634 101 64 0 1 101 1227 1327 2.50e-14 77.8
Msa0936380 AT2G07680.3 23.954 526 362 14 242 752 914 1416 4.99e-31 131
Msa0936380 AT2G07680.3 25.761 427 270 12 327 742 400 790 1.47e-25 114
Msa0936380 AT2G07680.3 36.634 101 64 0 1 101 1326 1426 2.67e-14 77.8
Msa0936380 AT2G07680.4 23.954 526 362 14 242 752 889 1391 5.02e-31 131
Msa0936380 AT2G07680.4 25.761 427 270 12 327 742 375 765 1.41e-25 114
Msa0936380 AT2G07680.4 36.634 101 64 0 1 101 1301 1401 2.65e-14 77.8
Msa0936380 AT2G07680.1 23.954 526 362 14 242 752 892 1394 5.21e-31 131
Msa0936380 AT2G07680.1 25.761 427 270 12 327 742 378 768 1.52e-25 114
Msa0936380 AT2G07680.1 36.634 101 64 0 1 101 1304 1404 2.80e-14 77.8
Msa0936380 AT2G07680.5 23.954 526 362 14 242 752 898 1400 5.84e-31 131
Msa0936380 AT2G07680.5 25.761 427 270 12 327 742 384 774 1.41e-25 114
Msa0936380 AT2G07680.5 36.634 101 64 0 1 101 1310 1410 2.75e-14 77.8
Msa0936380 AT1G67940.1 34.466 206 122 4 538 739 44 240 2.70e-30 120
Msa0936380 AT2G07680.2 25.761 427 270 12 327 742 400 790 1.20e-25 114
Msa0936380 AT3G60160.2 24.565 517 346 13 246 749 358 843 2.00e-24 110
Msa0936380 AT3G60160.2 24.862 362 228 14 277 617 1012 1350 1.28e-15 82.0
Msa0936380 AT3G60160.2 32.812 128 71 3 1 113 755 882 2.59e-12 71.2
Msa0936380 AT1G30410.3 21.802 688 436 27 1 652 741 1362 2.71e-22 103
Msa0936380 AT1G30410.3 29.060 234 144 6 521 750 615 830 9.55e-20 95.5
Msa0936380 AT1G30420.2 27.039 233 152 6 521 751 615 831 7.06e-19 92.4
Msa0936380 AT1G65410.1 32.129 249 131 11 521 743 85 321 1.11e-18 89.0
Msa0936380 AT3G13080.3 32.680 153 99 2 600 751 706 855 2.15e-18 90.9
Msa0936380 AT3G13080.4 32.680 153 99 2 600 751 706 855 2.15e-18 90.9
Msa0936380 AT4G33460.1 28.750 240 132 8 521 746 40 254 4.86e-16 79.7
Msa0936380 AT5G06530.2 29.880 251 143 12 538 771 179 413 4.13e-15 80.1
Msa0936380 AT5G06530.1 29.880 251 143 12 538 771 179 413 4.13e-15 80.1
Msa0936380 AT5G06530.3 29.482 251 144 11 538 771 179 413 4.35e-15 79.7
Msa0936380 AT3G25620.2 27.626 257 163 10 533 777 94 339 5.26e-15 79.7
Msa0936380 AT4G25750.1 30.088 226 135 8 537 750 29 243 8.92e-15 78.6
Msa0936380 AT3G25620.1 29.412 221 134 9 533 741 94 304 9.59e-15 78.2
Msa0936380 AT1G71330.1 33.333 123 78 2 630 751 8 127 1.64e-14 75.9
Msa0936380 AT1G31770.1 28.112 249 159 10 538 776 81 319 2.13e-14 77.4
Msa0936380 AT4G27420.1 26.877 253 161 10 538 776 66 308 2.18e-14 77.4
Msa0936380 AT1G17840.1 33.641 217 127 8 538 744 69 278 2.97e-14 77.0
Msa0936380 AT2G41700.1 27.132 258 174 9 513 766 540 787 3.98e-14 77.4
Msa0936380 AT2G41700.1 22.692 260 162 11 523 765 1455 1692 8.88e-13 72.8
Msa0936380 AT2G41700.2 27.132 258 174 9 513 766 470 717 4.39e-14 77.4
Msa0936380 AT2G41700.2 23.478 230 142 10 523 735 1413 1625 1.09e-12 72.8
Msa0936380 AT5G61700.1 24.370 238 165 7 523 755 600 827 4.49e-14 77.0
Msa0936380 AT2G13610.1 25.701 214 142 6 538 742 62 267 4.49e-14 76.6
Msa0936380 AT1G51500.1 32.127 221 114 12 530 733 36 237 4.52e-14 76.6
Msa0936380 AT5G19410.1 32.314 229 124 11 538 746 66 283 5.14e-14 76.3
Msa0936380 AT5G19410.2 32.314 229 124 11 538 746 75 292 5.17e-14 76.3
Msa0936380 AT3G21090.1 31.905 210 120 9 534 733 41 237 9.95e-14 75.5
Msa0936380 AT2G37360.1 30.455 220 137 10 537 746 132 345 1.02e-13 75.5
Msa0936380 AT3G55090.1 30.806 211 128 9 549 748 118 321 1.41e-13 75.1
Msa0936380 AT3G55100.1 30.357 224 130 9 538 746 51 263 1.58e-13 74.7
Msa0936380 AT3G55100.2 30.357 224 130 9 538 746 51 263 1.58e-13 74.7
Msa0936380 AT2G01320.7 29.333 225 124 11 537 741 89 298 1.63e-13 74.3
Msa0936380 AT2G01320.6 29.333 225 124 11 537 741 89 298 1.63e-13 74.3
Msa0936380 AT5G61740.1 23.629 237 169 7 523 756 592 819 1.77e-13 75.1
Msa0936380 AT2G01320.8 29.333 225 124 11 537 741 89 298 1.95e-13 74.3
Msa0936380 AT2G01320.5 29.333 225 124 11 537 741 89 298 1.95e-13 74.3
Msa0936380 AT5G61740.2 23.629 237 169 7 523 756 558 785 2.21e-13 74.7
Msa0936380 AT5G61740.3 23.629 237 169 7 523 756 453 680 2.22e-13 74.3
Msa0936380 AT2G01320.1 29.333 225 124 11 537 741 89 298 2.44e-13 74.3
Msa0936380 AT2G01320.4 29.333 225 124 11 537 741 89 298 2.44e-13 74.3
Msa0936380 AT2G01320.2 29.333 225 124 11 537 741 89 298 2.55e-13 74.3
Msa0936380 AT2G01320.3 29.333 225 124 11 537 741 89 298 2.62e-13 74.3
Msa0936380 AT3G55110.1 31.925 213 132 9 549 752 102 310 2.98e-13 73.9
Msa0936380 AT3G47780.1 21.790 257 183 6 523 777 618 858 5.38e-13 73.6
Msa0936380 AT5G61700.2 25.592 211 142 7 523 727 600 801 7.05e-13 72.8
Msa0936380 AT5G61700.4 25.592 211 142 7 523 727 600 801 7.05e-13 72.8
Msa0936380 AT5G52860.1 30.317 221 134 7 534 746 40 248 7.67e-13 72.4
Msa0936380 AT3G47790.1 25.210 238 163 8 523 755 591 818 9.46e-13 72.4
Msa0936380 AT3G53510.1 30.594 219 138 10 537 746 125 338 1.21e-12 72.0
Msa0936380 AT3G55130.1 31.250 208 128 9 549 746 110 312 1.40e-12 72.0
Msa0936380 AT5G06530.4 29.825 228 139 11 555 771 1 218 1.50e-12 71.2
Msa0936380 AT2G39350.1 30.144 209 128 9 549 746 120 321 1.57e-12 71.6
Msa0936380 AT3G13220.1 29.388 245 151 13 538 771 106 339 2.56e-12 70.9
Msa0936380 AT3G47760.3 23.849 239 170 7 523 758 619 848 3.11e-12 70.9
Msa0936380 AT3G47760.1 23.849 239 170 7 523 758 579 808 3.24e-12 70.9
Msa0936380 AT3G47760.2 23.849 239 170 7 523 758 589 818 3.48e-12 70.9
Msa0936380 AT4G39850.3 25.806 217 144 8 521 733 448 651 1.72e-11 68.6
Msa0936380 AT4G39850.1 25.806 217 144 8 521 733 448 651 1.90e-11 68.6
Msa0936380 AT4G39850.4 25.806 217 144 8 521 733 448 651 1.90e-11 68.6
Msa0936380 AT4G39850.2 25.806 217 144 8 521 733 448 651 1.95e-11 68.6
Msa0936380 AT5G14100.1 28.139 231 143 9 521 741 51 268 1.97e-11 65.9
Msa0936380 AT3G47750.1 21.212 264 197 6 497 758 595 849 3.59e-11 67.4
Msa0936380 AT1G53270.1 27.751 209 132 7 552 749 64 264 4.10e-11 67.0
Msa0936380 AT1G51460.1 35.359 181 94 9 553 721 45 214 4.17e-11 67.0
Msa0936380 AT3G47790.2 26.064 188 126 6 523 706 472 650 5.55e-11 66.6
Msa0936380 AT3G47790.3 26.064 188 126 6 523 706 591 769 7.78e-11 66.2

Find 151 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAATTGAGAAGAGATTTA+AGG 0.130152 6_3:-7071276 Msa0936380:three_prime_UTR
AATTCCTATGTTATTAATTA+TGG 0.179713 6_3:-7071177 Msa0936380:three_prime_UTR
CAACAACATTGTTATAATTA+AGG 0.183606 6_3:+7074149 None:intergenic
TTTCCATGATCTTACCATTT+TGG 0.185468 6_3:+7074371 None:intergenic
CTGCAATGATGTCTGCATTT+TGG 0.220988 6_3:+7074398 None:intergenic
GTACTTGGGCATTGGACTTT+TGG 0.224283 6_3:-7072396 Msa0936380:CDS
TTGTGATTTGATTGCTGTTT+TGG 0.232267 6_3:-7071531 Msa0936380:CDS
GAGAAGAGATTTAAGGAAAT+TGG 0.232606 6_3:-7071269 Msa0936380:three_prime_UTR
TAACCCTTTCTAAAGCTTCT+TGG 0.255235 6_3:+7071606 None:intergenic
TGGCTCCGACCTTGAAAATA+AGG 0.261849 6_3:-7071083 Msa0936380:three_prime_UTR
ACATACCACATTGGCATCTT+TGG 0.262089 6_3:+7073670 None:intergenic
GTATAATTGTTGTGGTAATT+TGG 0.267633 6_3:-7071315 Msa0936380:three_prime_UTR
ATGAGATCAAGAAGCAAATT+AGG 0.271355 6_3:-7073889 Msa0936380:CDS
ACATTCATCTTGGGCCTTGA+TGG 0.293255 6_3:+7072591 None:intergenic
AATAACACAGGTAAGATCTT+TGG 0.297974 6_3:-7072785 Msa0936380:intron
CCTGTATATTCGTTTGCATT+GGG 0.304375 6_3:-7073947 Msa0936380:CDS
AGATTCTATGATCCACTTAA+TGG 0.310077 6_3:-7071995 Msa0936380:CDS
TCATCCAAAAGCAACACTTC+TGG 0.310287 6_3:+7071668 None:intergenic
CAATCCTGGTTTGCAGGTAT+TGG 0.312009 6_3:-7072448 Msa0936380:CDS
CCTTGAAAATAAGGGGAGTT+AGG 0.317167 6_3:-7071074 Msa0936380:three_prime_UTR
TTGGTAGGGGAAAGTGGTTC+TGG 0.321236 6_3:-7072046 Msa0936380:CDS
TTTGGTCATTTCTAGTTTGT+TGG 0.321503 6_3:+7074287 None:intergenic
ATCATTGCAGTTGTCCAAAA+TGG 0.323631 6_3:-7074385 Msa0936380:CDS
AAGTGGAGCTTATTACTCTT+TGG 0.339199 6_3:-7071453 Msa0936380:CDS
GAATCCAGAAGTGTTGCTTT+TGG 0.344852 6_3:-7071672 Msa0936380:CDS
AGAGTGGAAGCAAGCATGTT+TGG 0.349219 6_3:-7074005 Msa0936380:CDS
CATGTGAAGAATCAACAATT+AGG 0.350763 6_3:+7071405 None:intergenic
AATGTTTATTACTATAGGTT+GGG 0.357008 6_3:-7074621 Msa0936380:five_prime_UTR
ATTCATCTTTGTTGTCTAAA+GGG 0.360608 6_3:-7071478 Msa0936380:CDS
ACATAAAGACATATAATCTT+AGG 0.361228 6_3:-7071949 Msa0936380:CDS
TAATAAATATAATAAGAAAA+AGG 0.363463 6_3:-7074077 Msa0936380:CDS
ATCTTTGGTGGGTGATAGAT+TGG 0.365517 6_3:-7072770 Msa0936380:CDS
ATGTTAATGTTTATTACTAT+AGG 0.374423 6_3:-7074626 Msa0936380:five_prime_UTR
CATTCATCTTTGTTGTCTAA+AGG 0.375005 6_3:-7071479 Msa0936380:CDS
ACCTGTATATTCGTTTGCAT+TGG 0.383883 6_3:-7073948 Msa0936380:CDS
TCTGGAAAATCGACAATCAT+AGG 0.387595 6_3:-7072028 Msa0936380:CDS
AGGGTTGGCTGTTATCTCAA+TGG 0.394186 6_3:-7073846 Msa0936380:CDS
CAAGAACCAACATTGTTTAG+TGG 0.394284 6_3:-7071896 Msa0936380:CDS
TAGAAACAACATATGATAAC+TGG 0.396082 6_3:+7072652 None:intergenic
TATCCTCTATTCATGATAGA+TGG 0.396351 6_3:+7074253 None:intergenic
ACATTATAGCTTTGCTTACA+TGG 0.396877 6_3:-7073807 Msa0936380:CDS
GAGTGGAAGCAAGCATGTTT+GGG 0.401179 6_3:-7074004 Msa0936380:CDS
AGAAGCTTTAGAAAGGGTTA+TGG 0.404581 6_3:-7071603 Msa0936380:CDS
ATCGAGCCCGATGATTTAGA+AGG 0.405182 6_3:-7072196 Msa0936380:CDS
ATTAGACAATCCTGGTTTGC+AGG 0.408062 6_3:-7072454 Msa0936380:CDS
TAATGTTTATTACTATAGGT+TGG 0.408218 6_3:-7074622 Msa0936380:five_prime_UTR
GATTCTATGATCCACTTAAT+GGG 0.417653 6_3:-7071994 Msa0936380:CDS
ATAAGGGAAAATATTGCATA+TGG 0.423678 6_3:-7071869 Msa0936380:CDS
TGCAGGAAAATCAACGGCTT+TGG 0.424503 6_3:-7072065 Msa0936380:CDS
AACTTCAAATGTGAGTATCT+TGG 0.426494 6_3:+7073745 None:intergenic
CATTGTTTAGTGGTACCATA+AGG 0.429182 6_3:-7071886 Msa0936380:CDS
AAGATACTCACATTTGAAGT+TGG 0.429629 6_3:-7073743 Msa0936380:CDS
GATGAGGATCAAAATTCTAC+AGG 0.433099 6_3:-7073713 Msa0936380:CDS
TCATATGTTGTTTCTATACA+AGG 0.436797 6_3:-7072645 Msa0936380:CDS
TCTATTTATGGTTAAAATTG+TGG 0.446416 6_3:-7071103 Msa0936380:three_prime_UTR
AGCTTCTTGAACAACTCGTT+CGG 0.453198 6_3:+7074480 None:intergenic
TTACTATAGGTTGGGGAGAG+AGG 0.454048 6_3:-7074613 Msa0936380:five_prime_UTR
GGCTCCGACCTTGAAAATAA+GGG 0.457396 6_3:-7071082 Msa0936380:three_prime_UTR
TACTTGACATGTTCTTAAGA+AGG 0.464695 6_3:+7072617 None:intergenic
TTGTAACCTTCTAAATCATC+GGG 0.469119 6_3:+7072190 None:intergenic
TAGTCCAAGAAGCTTTAGAA+AGG 0.469291 6_3:-7071610 Msa0936380:CDS
GAGAGAGGAGTTCAGATGTC+AGG 0.469673 6_3:-7074598 Msa0936380:exon
GCTTTAGAAAGGGTTATGGT+TGG 0.469979 6_3:-7071599 Msa0936380:CDS
TTTGTAACCTTCTAAATCAT+CGG 0.470995 6_3:+7072189 None:intergenic
TTTGTATCAAGCTTAAAAGA+TGG 0.472827 6_3:-7071779 Msa0936380:CDS
GAATCAACAATTAGGTTGGT+TGG 0.475662 6_3:+7071413 None:intergenic
AATGGTAAGATCATGGAAAC+GGG 0.477650 6_3:-7074367 Msa0936380:CDS
AAATGGTAAGATCATGGAAA+CGG 0.478684 6_3:-7074368 Msa0936380:CDS
CTTGAAAATAAGGGGAGTTA+GGG 0.480037 6_3:-7071073 Msa0936380:three_prime_UTR
TACTCACATTTGAAGTTGGT+TGG 0.483766 6_3:-7073739 Msa0936380:CDS
TTCTCGATTAAAATTGATGC+AGG 0.486277 6_3:-7072082 Msa0936380:CDS
TGTCCAAAATGGTAAGATCA+TGG 0.491207 6_3:-7074374 Msa0936380:CDS
ATTGTCACTATCCCATTAAG+TGG 0.491301 6_3:+7071983 None:intergenic
ATGTTTATTACTATAGGTTG+GGG 0.493116 6_3:-7074620 Msa0936380:five_prime_UTR
TTTGCTTCTTGATCTCATCA+TGG 0.496658 6_3:+7073894 None:intergenic
ATTGTTTAGTGGTACCATAA+GGG 0.498161 6_3:-7071885 Msa0936380:CDS
TGTCTAATACTTTCATGACT+TGG 0.499562 6_3:+7072469 None:intergenic
TGAGATTATAGAGGCATCAA+AGG 0.502637 6_3:-7071819 Msa0936380:CDS
AAGATCATTCGTCATGCTAC+CGG 0.505808 6_3:+7072276 None:intergenic
TGTACAATCATCAAAACTGT+TGG 0.508674 6_3:-7071217 Msa0936380:three_prime_UTR
GCTCTAGACAAAGCCGCAGT+TGG 0.513601 6_3:-7074460 Msa0936380:CDS
AAACATGCTTGCTTCCACTC+TGG 0.514251 6_3:+7074007 None:intergenic
ACTCCATCTATCATGAATAG+AGG 0.515610 6_3:-7074256 Msa0936380:CDS
TGAAGAATCAACAATTAGGT+TGG 0.517666 6_3:+7071409 None:intergenic
ATCATAACATTAGGTCTACC+TGG 0.518185 6_3:+7072115 None:intergenic
ATGAAAGTATTAGACAATCC+TGG 0.518960 6_3:-7072462 Msa0936380:CDS
AGTCCAAGAAGCTTTAGAAA+GGG 0.522140 6_3:-7071609 Msa0936380:CDS
GTGGTAATAGCATTCACAAT+GGG 0.523230 6_3:-7072721 Msa0936380:CDS
AAGGGAAGTGTTGTTGAGAA+AGG 0.523547 6_3:-7071506 Msa0936380:CDS
AAGTCCAATACCTGCAAACC+AGG 0.524712 6_3:+7072444 None:intergenic
AAAATCAACGGCTTTGGTAG+GGG 0.525938 6_3:-7072059 Msa0936380:CDS
CCCAATGCAAACGAATATAC+AGG 0.528629 6_3:+7073947 None:intergenic
TAGAAAGGGTTATGGTTGGA+AGG 0.530375 6_3:-7071595 Msa0936380:CDS
CTGTATATTCGTTTGCATTG+GGG 0.531631 6_3:-7073946 Msa0936380:CDS
GGAAAATCAACGGCTTTGGT+AGG 0.531929 6_3:-7072061 Msa0936380:CDS
CATGTCAAGTAAAGCCATCA+AGG 0.532656 6_3:-7072605 Msa0936380:CDS
CATATAATCTTAGGTCATTG+AGG 0.534368 6_3:-7071940 Msa0936380:CDS
TGATGAGAGTGAGATTATAG+AGG 0.534756 6_3:-7071828 Msa0936380:CDS
ATGACGAATGATCTTGCTAA+AGG 0.534910 6_3:-7072268 Msa0936380:CDS
GATACACTGTGTGGTGATAG+AGG 0.535381 6_3:-7071752 Msa0936380:CDS
TCCTTCGTTTCGAAGGTTGT+TGG 0.535430 6_3:-7074041 Msa0936380:CDS
TCAAGGTTCCTTCGTTTCGA+AGG 0.537276 6_3:-7074048 Msa0936380:CDS
ATGGTACCACTAAACAATGT+TGG 0.543943 6_3:+7071890 None:intergenic
GAAAATCAACGGCTTTGGTA+GGG 0.544128 6_3:-7072060 Msa0936380:CDS
TGGGAGAGTACTTGACTAAG+AGG 0.544290 6_3:-7073787 Msa0936380:CDS
ACGGCTTTGGTAGGGGAAAG+TGG 0.544349 6_3:-7072052 Msa0936380:CDS
AGAGAGGAGTTCAGATGTCA+GGG 0.545022 6_3:-7074597 Msa0936380:exon
ATATTCGTTTGCATTGGGGT+CGG 0.548150 6_3:-7073942 Msa0936380:CDS
CATTATAGCTTTGCTTACAT+GGG 0.552491 6_3:-7073806 Msa0936380:CDS
TATTGTTAATAATGCTGTTG+TGG 0.553669 6_3:-7074122 Msa0936380:CDS
AATGGGATAGTGACAATTGA+CGG 0.559625 6_3:-7071977 Msa0936380:CDS
GCTAAAGGCTCTGATGCCGT+TGG 0.560861 6_3:-7072253 Msa0936380:CDS
AACACAGGTAAGATCTTTGG+TGG 0.560918 6_3:-7072782 Msa0936380:intron
ATAACCATAATTAATAACAT+AGG 0.563715 6_3:+7071173 None:intergenic
GGGTGATAGATTGGCTCTAG+TGG 0.574754 6_3:-7072761 Msa0936380:CDS
GGAAGAGTTATTGCTGATGC+CGG 0.578004 6_3:-7072295 Msa0936380:CDS
AATTGATGCAGGAAAATCAA+CGG 0.584264 6_3:-7072071 Msa0936380:CDS
TGAAGTTGGTTGGTTTGATG+AGG 0.588277 6_3:-7073729 Msa0936380:CDS
GCAAGGTTATATCTCGGCTA+AGG 0.590372 6_3:-7072353 Msa0936380:CDS
TTGTTGTCTAAAGGGTCAAG+TGG 0.591126 6_3:-7071470 Msa0936380:CDS
TAGATGGAGTGTCATCACTT+TGG 0.594249 6_3:+7074269 None:intergenic
GCCAACAACCTTCGAAACGA+AGG 0.598360 6_3:+7074040 None:intergenic
CAATGGGACTAATCATTGCA+TGG 0.598709 6_3:-7072705 Msa0936380:CDS
ATGTTTGGGTTGTATAAATG+CGG 0.610761 6_3:-7073990 Msa0936380:CDS
TGTGTCGCAAGGTTATATCT+CGG 0.619791 6_3:-7072359 Msa0936380:CDS
GCTCCGACCTTGAAAATAAG+GGG 0.622879 6_3:-7071081 Msa0936380:three_prime_UTR
TTGATGATGTATAATTGTTG+TGG 0.626158 6_3:-7071323 Msa0936380:three_prime_UTR
GGTGGAAAACTTGTGTCGCA+AGG 0.628793 6_3:-7072370 Msa0936380:CDS
TAGTTTGTTGGAGACGAACG+AGG 0.631439 6_3:+7074299 None:intergenic
TCTTTCAACTCAATGACGCA+TGG 0.633065 6_3:-7074184 Msa0936380:CDS
GATAGAGGAGTTCAACTTAG+CGG 0.637302 6_3:-7071737 Msa0936380:CDS
GGTACAAACAATTTCAGCAG+TGG 0.641972 6_3:-7072740 Msa0936380:CDS
GATGGTGGTGCGTCCAACTG+CGG 0.642040 6_3:+7074447 None:intergenic
AATAAGGGGAGTTAGGGAGA+TGG 0.646200 6_3:-7071067 Msa0936380:three_prime_UTR
TTGAACTGCTATCATAACAA+TGG 0.647321 6_3:+7072675 None:intergenic
AGAGGAGTTCAGATGTCAGG+GGG 0.650329 6_3:-7074595 Msa0936380:exon
TTGAGAAGAACATACCACAT+TGG 0.651727 6_3:+7073661 None:intergenic
CAAGCGTGGTTGTAGCACAT+AGG 0.654525 6_3:-7071571 Msa0936380:CDS
TTCAACTCAATGACGCATGG+TGG 0.667315 6_3:-7074181 Msa0936380:CDS
AGTTTGTTGGAGACGAACGA+GGG 0.673095 6_3:+7074300 None:intergenic
AGAGGAGTTCAACTTAGCGG+TGG 0.676026 6_3:-7071734 Msa0936380:CDS
TAAGCGGTGAGCAATGATGA+TGG 0.679127 6_3:+7074429 None:intergenic
AGTGGTAATAGCATTCACAA+TGG 0.681910 6_3:-7072722 Msa0936380:CDS
GAGAGGAGTTCAGATGTCAG+GGG 0.683641 6_3:-7074596 Msa0936380:exon
ACTTGCCAAAGATGCCAATG+TGG 0.684674 6_3:-7073675 Msa0936380:intron
TTGTTGGAGACGAACGAGGG+AGG 0.687691 6_3:+7074303 None:intergenic
ACACAGGTAAGATCTTTGGT+GGG 0.696726 6_3:-7072781 Msa0936380:intron
TATGGTTGGAAGGACAAGCG+TGG 0.707501 6_3:-7071585 Msa0936380:CDS
TGGCAATGAATGTACCAGAG+TGG 0.750093 6_3:-7074021 Msa0936380:CDS
GATGGTTATGATACACTGTG+TGG 0.799907 6_3:-7071761 Msa0936380:CDS
GCGGTGAGCAATGATGATGG+TGG 0.803718 6_3:+7074432 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTAATCAATTTTTTTAATT+TGG - chr6_3:7072147-7072166 Msa0936380:CDS 10.0%
!!! GTTTTAAAAAAATTTTAATG+GGG + chr6_3:7072911-7072930 None:intergenic 10.0%
!! ATGTTAATGTTTATTACTAT+AGG - chr6_3:7071105-7071124 Msa0936380:three_prime_UTR 15.0%
!!! ATCTATATATTTTGTTTTCT+AGG - chr6_3:7071865-7071884 Msa0936380:CDS 15.0%
!!! TCTATATATTTTGTTTTCTA+GGG - chr6_3:7071866-7071885 Msa0936380:CDS 15.0%
!!! ATATTGAAAACTATTTTGTT+AGG + chr6_3:7072384-7072403 None:intergenic 15.0%
!!! AAATTACAAATTTCTAAGAA+AGG - chr6_3:7072559-7072578 Msa0936380:CDS 15.0%
!! TAAAATGTTTAATTCTCATT+AGG + chr6_3:7072787-7072806 None:intergenic 15.0%
!!! ATTGTACAAATGAAAAATTT+TGG + chr6_3:7074502-7074521 None:intergenic 15.0%
!! AATTCCTATGTTATTAATTA+TGG - chr6_3:7074554-7074573 Msa0936380:CDS 15.0%
!! ATAACCATAATTAATAACAT+AGG + chr6_3:7074561-7074580 None:intergenic 15.0%
!! TAATGTTTATTACTATAGGT+TGG - chr6_3:7071109-7071128 Msa0936380:three_prime_UTR 20.0%
!! AATGTTTATTACTATAGGTT+GGG - chr6_3:7071110-7071129 Msa0936380:three_prime_UTR 20.0%
!!! AATTTTCGGCATTTTTATTA+TGG + chr6_3:7071191-7071210 None:intergenic 20.0%
!!! TCATCTAGTAATAGAATTTT+CGG + chr6_3:7071205-7071224 None:intergenic 20.0%
!! CAACAACATTGTTATAATTA+AGG + chr6_3:7071585-7071604 None:intergenic 20.0%
!! TTTCTTCAATTTAATAACAC+AGG - chr6_3:7072934-7072953 Msa0936380:intron 20.0%
!!! AGATAGAATTCTAAAAATAC+TGG - chr6_3:7073222-7073241 Msa0936380:intron 20.0%
!!! ATTTGAGACTTTTATGATTT+TGG - chr6_3:7073405-7073424 Msa0936380:intron 20.0%
!! TACAAAGCTGAAAAATTAAT+AGG - chr6_3:7073559-7073578 Msa0936380:intron 20.0%
!!! CTAATGTTATGATTTTTCAA+GGG - chr6_3:7073626-7073645 Msa0936380:intron 20.0%
!! ACATAAAGACATATAATCTT+AGG - chr6_3:7073782-7073801 Msa0936380:CDS 20.0%
!! TCTATTTATGGTTAAAATTG+TGG - chr6_3:7074628-7074647 Msa0936380:five_prime_UTR 20.0%
! ATGTTTATTACTATAGGTTG+GGG - chr6_3:7071111-7071130 Msa0936380:three_prime_UTR 25.0%
! TATTGTTAATAATGCTGTTG+TGG - chr6_3:7071609-7071628 Msa0936380:CDS 25.0%
!!! TGTATAAATGCGGTTTTATT+TGG - chr6_3:7071751-7071770 Msa0936380:CDS 25.0%
!!! TATATTTTGTTTTCTAGGGT+TGG - chr6_3:7071870-7071889 Msa0936380:CDS 25.0%
! AATGACAATTAAATCACGTA+AGG - chr6_3:7072183-7072202 Msa0936380:CDS 25.0%
! ATGACAATTAAATCACGTAA+GGG - chr6_3:7072184-7072203 Msa0936380:CDS 25.0%
! TCTGTTGTATTAACAATAAC+CGG + chr6_3:7072494-7072513 None:intergenic 25.0%
!!! AATTTTAGTGCCAATTGAAT+GGG + chr6_3:7072544-7072563 None:intergenic 25.0%
!!! TAATTTTAGTGCCAATTGAA+TGG + chr6_3:7072545-7072564 None:intergenic 25.0%
! ACATGAAAAGATAATCCAAA+AGG + chr6_3:7072591-7072610 None:intergenic 25.0%
! TAGAAACAACATATGATAAC+TGG + chr6_3:7073082-7073101 None:intergenic 25.0%
!!! TCATATGTTGTTTCTATACA+AGG - chr6_3:7073086-7073105 Msa0936380:intron 25.0%
!! TATTTTGCTACATTCATCTT+GGG + chr6_3:7073152-7073171 None:intergenic 25.0%
!! AAAGTCTCAATTTTTGTACT+TGG - chr6_3:7073320-7073339 Msa0936380:intron 25.0%
!! AAGTCTCAATTTTTGTACTT+GGG - chr6_3:7073321-7073340 Msa0936380:intron 25.0%
!!! TTTATGATTTTGGTAAGTAC+AGG - chr6_3:7073415-7073434 Msa0936380:intron 25.0%
! TTTGTAACCTTCTAAATCAT+CGG + chr6_3:7073545-7073564 None:intergenic 25.0%
! CCTTGAAAAATCATAACATT+AGG + chr6_3:7073628-7073647 None:intergenic 25.0%
!! CCTAATGTTATGATTTTTCA+AGG - chr6_3:7073625-7073644 Msa0936380:intron 25.0%
!! ATATGCAATATTTTCCCTTA+TGG + chr6_3:7073863-7073882 None:intergenic 25.0%
! ATAAGGGAAAATATTGCATA+TGG - chr6_3:7073862-7073881 Msa0936380:CDS 25.0%
! TTTGTATCAAGCTTAAAAGA+TGG - chr6_3:7073952-7073971 Msa0936380:CDS 25.0%
!! ATTCATCTTTGTTGTCTAAA+GGG - chr6_3:7074253-7074272 Msa0936380:CDS 25.0%
!! TCAAGTTTTTCATGTTTGAA+TGG - chr6_3:7074370-7074389 Msa0936380:CDS 25.0%
!!! TTGATGATGTATAATTGTTG+TGG - chr6_3:7074408-7074427 Msa0936380:CDS 25.0%
! GTATAATTGTTGTGGTAATT+TGG - chr6_3:7074416-7074435 Msa0936380:CDS 25.0%
! GAAAATTGAGAAGAGATTTA+AGG - chr6_3:7074455-7074474 Msa0936380:CDS 25.0%
!! GTACAAATGAAAAATTTTGG+AGG + chr6_3:7074499-7074518 None:intergenic 25.0%
!! TAGTCTTTTGTCTCTATTTA+TGG - chr6_3:7074616-7074635 Msa0936380:five_prime_UTR 25.0%
! TTTTATTATGGCTCTTGCAA+TGG + chr6_3:7071179-7071198 None:intergenic 30.0%
! TTTCCATGATCTTACCATTT+TGG + chr6_3:7071363-7071382 None:intergenic 30.0%
AAATGGTAAGATCATGGAAA+CGG - chr6_3:7071363-7071382 Msa0936380:three_prime_UTR 30.0%
! GAGAATTTTCATTTTGCATG+AGG + chr6_3:7071402-7071421 None:intergenic 30.0%
!! TTTGGTCATTTCTAGTTTGT+TGG + chr6_3:7071447-7071466 None:intergenic 30.0%
TATCCTCTATTCATGATAGA+TGG + chr6_3:7071481-7071500 None:intergenic 30.0%
TAAGAAAAAGGAGAAAGTCA+AGG - chr6_3:7071666-7071685 Msa0936380:CDS 30.0%
!! ATGTTTGGGTTGTATAAATG+CGG - chr6_3:7071741-7071760 Msa0936380:CDS 30.0%
!! GGTTGTATCAGTTTATTTTC+TGG - chr6_3:7071810-7071829 Msa0936380:CDS 30.0%
!! TGTATCAGTTTATTTTCTGG+AGG - chr6_3:7071813-7071832 Msa0936380:CDS 30.0%
ATGAGATCAAGAAGCAAATT+AGG - chr6_3:7071842-7071861 Msa0936380:CDS 30.0%
! ACATTATAGCTTTGCTTACA+TGG - chr6_3:7071924-7071943 Msa0936380:CDS 30.0%
! CATTATAGCTTTGCTTACAT+GGG - chr6_3:7071925-7071944 Msa0936380:CDS 30.0%
AACTTCAAATGTGAGTATCT+TGG + chr6_3:7071989-7072008 None:intergenic 30.0%
! AAGATACTCACATTTGAAGT+TGG - chr6_3:7071988-7072007 Msa0936380:CDS 30.0%
! TAAGAAAGGATCTTACCTTT+TGG - chr6_3:7072573-7072592 Msa0936380:CDS 30.0%
CCATGTTATTGAAAGATTCT+TGG + chr6_3:7072638-7072657 None:intergenic 30.0%
CCAAGAATCTTTCAATAACA+TGG - chr6_3:7072635-7072654 Msa0936380:CDS 30.0%
! TGTTACTGTTCTTCATTTTG+AGG - chr6_3:7072679-7072698 Msa0936380:CDS 30.0%
AATAACACAGGTAAGATCTT+TGG - chr6_3:7072946-7072965 Msa0936380:intron 30.0%
TTGAACTGCTATCATAACAA+TGG + chr6_3:7073059-7073078 None:intergenic 30.0%
TACTTGACATGTTCTTAAGA+AGG + chr6_3:7073117-7073136 None:intergenic 30.0%
! CTATTTTGCTACATTCATCT+TGG + chr6_3:7073153-7073172 None:intergenic 30.0%
!! TTGAGATGAAAAAGCATTGA+TGG + chr6_3:7073203-7073222 None:intergenic 30.0%
TGTCTAATACTTTCATGACT+TGG + chr6_3:7073265-7073284 None:intergenic 30.0%
!! ATGAAAGTATTAGACAATCC+TGG - chr6_3:7073269-7073288 Msa0936380:intron 30.0%
TTGTAACCTTCTAAATCATC+GGG + chr6_3:7073544-7073563 None:intergenic 30.0%
! GATGTATATTTTGCATATCC+AGG - chr6_3:7073598-7073617 Msa0936380:intron 30.0%
TTCTCGATTAAAATTGATGC+AGG - chr6_3:7073649-7073668 Msa0936380:intron 30.0%
AATTGATGCAGGAAAATCAA+CGG - chr6_3:7073660-7073679 Msa0936380:intron 30.0%
AGATTCTATGATCCACTTAA+TGG - chr6_3:7073736-7073755 Msa0936380:CDS 30.0%
GATTCTATGATCCACTTAAT+GGG - chr6_3:7073737-7073756 Msa0936380:CDS 30.0%
CATATAATCTTAGGTCATTG+AGG - chr6_3:7073791-7073810 Msa0936380:CDS 30.0%
ATTGTTTAGTGGTACCATAA+GGG - chr6_3:7073846-7073865 Msa0936380:CDS 30.0%
!!! TTGTGATTTGATTGCTGTTT+TGG - chr6_3:7074200-7074219 Msa0936380:CDS 30.0%
!!! TTTGATTGCTGTTTTGGATA+AGG - chr6_3:7074206-7074225 Msa0936380:CDS 30.0%
!!! TTGATTGCTGTTTTGGATAA+GGG - chr6_3:7074207-7074226 Msa0936380:CDS 30.0%
! CATTCATCTTTGTTGTCTAA+AGG - chr6_3:7074252-7074271 Msa0936380:CDS 30.0%
TGAAGAATCAACAATTAGGT+TGG + chr6_3:7074325-7074344 None:intergenic 30.0%
CATGTGAAGAATCAACAATT+AGG + chr6_3:7074329-7074348 None:intergenic 30.0%
GAGAAGAGATTTAAGGAAAT+TGG - chr6_3:7074462-7074481 Msa0936380:CDS 30.0%
!! ATGAAAAATTTTGGAGGCTA+AGG + chr6_3:7074493-7074512 None:intergenic 30.0%
TGTACAATCATCAAAACTGT+TGG - chr6_3:7074514-7074533 Msa0936380:CDS 30.0%
!!! CATTTTGGATGGTTGATAAG+CGG + chr6_3:7071321-7071340 None:intergenic 35.0%
! AATGATGTCTGCATTTTGGA+TGG + chr6_3:7071332-7071351 None:intergenic 35.0%
ATCATTGCAGTTGTCCAAAA+TGG - chr6_3:7071346-7071365 Msa0936380:three_prime_UTR 35.0%
TGTCCAAAATGGTAAGATCA+TGG - chr6_3:7071357-7071376 Msa0936380:three_prime_UTR 35.0%
AATGGTAAGATCATGGAAAC+GGG - chr6_3:7071364-7071383 Msa0936380:three_prime_UTR 35.0%
ACTCCATCTATCATGAATAG+AGG - chr6_3:7071475-7071494 Msa0936380:CDS 35.0%
ACCTGTATATTCGTTTGCAT+TGG - chr6_3:7071783-7071802 Msa0936380:CDS 35.0%
CCTGTATATTCGTTTGCATT+GGG - chr6_3:7071784-7071803 Msa0936380:CDS 35.0%
CTGTATATTCGTTTGCATTG+GGG - chr6_3:7071785-7071804 Msa0936380:CDS 35.0%
TTTGCTTCTTGATCTCATCA+TGG + chr6_3:7071840-7071859 None:intergenic 35.0%
! TACTCACATTTGAAGTTGGT+TGG - chr6_3:7071992-7072011 Msa0936380:CDS 35.0%
GATGAGGATCAAAATTCTAC+AGG - chr6_3:7072018-7072037 Msa0936380:CDS 35.0%
TTGAGAAGAACATACCACAT+TGG + chr6_3:7072073-7072092 None:intergenic 35.0%
TACACAAGTTGCAAGTGAAA+AGG - chr6_3:7072233-7072252 Msa0936380:CDS 35.0%
GAATATCAAACCAAAGACAC+CGG - chr6_3:7072472-7072491 Msa0936380:CDS 35.0%
TTAACAATAACCGGTGTCTT+TGG + chr6_3:7072485-7072504 None:intergenic 35.0%
TAATGTGTGACCCATTCAAT+TGG - chr6_3:7072531-7072550 Msa0936380:CDS 35.0%
GAAGCTAGTAAATAGAACGA+AGG + chr6_3:7072616-7072635 None:intergenic 35.0%
TGAAGAACAGTAACAATCAG+TGG + chr6_3:7072674-7072693 None:intergenic 35.0%
GTTTAATTCTCATTAGGCGT+CGG + chr6_3:7072781-7072800 None:intergenic 35.0%
TATTATCGTGTAAGCTCACT+TGG + chr6_3:7072833-7072852 None:intergenic 35.0%
AGTGGTAATAGCATTCACAA+TGG - chr6_3:7073009-7073028 Msa0936380:intron 35.0%
GTGGTAATAGCATTCACAAT+GGG - chr6_3:7073010-7073029 Msa0936380:intron 35.0%
! ATACTGGAAAAAGCACAACA+AGG - chr6_3:7073238-7073257 Msa0936380:intron 35.0%
! CAATTTTTGTACTTGGGCAT+TGG - chr6_3:7073327-7073346 Msa0936380:intron 35.0%
ATGACGAATGATCTTGCTAA+AGG - chr6_3:7073463-7073482 Msa0936380:intron 35.0%
GATTGCAAAAACTGATCCAA+CGG + chr6_3:7073497-7073516 None:intergenic 35.0%
! CGATTTTTGTATACCTATCG+AGG + chr6_3:7073519-7073538 None:intergenic 35.0%
ATCATAACATTAGGTCTACC+TGG + chr6_3:7073619-7073638 None:intergenic 35.0%
TCTGGAAAATCGACAATCAT+AGG - chr6_3:7073703-7073722 Msa0936380:CDS 35.0%
ATTGTCACTATCCCATTAAG+TGG + chr6_3:7073751-7073770 None:intergenic 35.0%
AATGGGATAGTGACAATTGA+CGG - chr6_3:7073754-7073773 Msa0936380:CDS 35.0%
CAAGAACCAACATTGTTTAG+TGG - chr6_3:7073835-7073854 Msa0936380:CDS 35.0%
ATGGTACCACTAAACAATGT+TGG + chr6_3:7073844-7073863 None:intergenic 35.0%
CATTGTTTAGTGGTACCATA+AGG - chr6_3:7073845-7073864 Msa0936380:CDS 35.0%
TGATGAGAGTGAGATTATAG+AGG - chr6_3:7073903-7073922 Msa0936380:CDS 35.0%
!! TGAGATTATAGAGGCATCAA+AGG - chr6_3:7073912-7073931 Msa0936380:CDS 35.0%
!! TAGTCCAAGAAGCTTTAGAA+AGG - chr6_3:7074121-7074140 Msa0936380:CDS 35.0%
!! AGTCCAAGAAGCTTTAGAAA+GGG - chr6_3:7074122-7074141 Msa0936380:CDS 35.0%
!! TAACCCTTTCTAAAGCTTCT+TGG + chr6_3:7074128-7074147 None:intergenic 35.0%
!! AGAAGCTTTAGAAAGGGTTA+TGG - chr6_3:7074128-7074147 Msa0936380:CDS 35.0%
AAGTGGAGCTTATTACTCTT+TGG - chr6_3:7074278-7074297 Msa0936380:CDS 35.0%
!! GAATCAACAATTAGGTTGGT+TGG + chr6_3:7074321-7074340 None:intergenic 35.0%
CTTGAAAATAAGGGGAGTTA+GGG - chr6_3:7074658-7074677 Msa0936380:five_prime_UTR 35.0%
AGCTTCTTGAACAACTCGTT+CGG + chr6_3:7071254-7071273 None:intergenic 40.0%
! CTGCAATGATGTCTGCATTT+TGG + chr6_3:7071336-7071355 None:intergenic 40.0%
! TAGATGGAGTGTCATCACTT+TGG + chr6_3:7071465-7071484 None:intergenic 40.0%
TCTTTCAACTCAATGACGCA+TGG - chr6_3:7071547-7071566 Msa0936380:CDS 40.0%
CCCAATGCAAACGAATATAC+AGG + chr6_3:7071787-7071806 None:intergenic 40.0%
ATATTCGTTTGCATTGGGGT+CGG - chr6_3:7071789-7071808 Msa0936380:CDS 40.0%
!! TGAAGTTGGTTGGTTTGATG+AGG - chr6_3:7072002-7072021 Msa0936380:CDS 40.0%
ACATACCACATTGGCATCTT+TGG + chr6_3:7072064-7072083 None:intergenic 40.0%
! TTGCAAGTGAAAAGGCATAG+AGG - chr6_3:7072241-7072260 Msa0936380:CDS 40.0%
AACACAGGTAAGATCTTTGG+TGG - chr6_3:7072949-7072968 Msa0936380:intron 40.0%
ACACAGGTAAGATCTTTGGT+GGG - chr6_3:7072950-7072969 Msa0936380:intron 40.0%
! ATCTTTGGTGGGTGATAGAT+TGG - chr6_3:7072961-7072980 Msa0936380:intron 40.0%
GGTACAAACAATTTCAGCAG+TGG - chr6_3:7072991-7073010 Msa0936380:intron 40.0%
CAATGGGACTAATCATTGCA+TGG - chr6_3:7073026-7073045 Msa0936380:intron 40.0%
CATGTCAAGTAAAGCCATCA+AGG - chr6_3:7073126-7073145 Msa0936380:intron 40.0%
! ATTAGACAATCCTGGTTTGC+AGG - chr6_3:7073277-7073296 Msa0936380:intron 40.0%
TGTGTCGCAAGGTTATATCT+CGG - chr6_3:7073372-7073391 Msa0936380:intron 40.0%
AAGATCATTCGTCATGCTAC+CGG + chr6_3:7073458-7073477 None:intergenic 40.0%
! CAGTTTTTGCAATCCTCGAT+AGG - chr6_3:7073503-7073522 Msa0936380:intron 40.0%
! GAAAATCAACGGCTTTGGTA+GGG - chr6_3:7073671-7073690 Msa0936380:intron 40.0%
! AAAATCAACGGCTTTGGTAG+GGG - chr6_3:7073672-7073691 Msa0936380:intron 40.0%
GATGGTTATGATACACTGTG+TGG - chr6_3:7073970-7073989 Msa0936380:CDS 40.0%
GATAGAGGAGTTCAACTTAG+CGG - chr6_3:7073994-7074013 Msa0936380:CDS 40.0%
!!! GAATCCAGAAGTGTTGCTTT+TGG - chr6_3:7074059-7074078 Msa0936380:CDS 40.0%
TCATCCAAAAGCAACACTTC+TGG + chr6_3:7074066-7074085 None:intergenic 40.0%
!! GCTTTAGAAAGGGTTATGGT+TGG - chr6_3:7074132-7074151 Msa0936380:CDS 40.0%
TAGAAAGGGTTATGGTTGGA+AGG - chr6_3:7074136-7074155 Msa0936380:CDS 40.0%
!! AAGGGAAGTGTTGTTGAGAA+AGG - chr6_3:7074225-7074244 Msa0936380:CDS 40.0%
TTGTTGTCTAAAGGGTCAAG+TGG - chr6_3:7074261-7074280 Msa0936380:CDS 40.0%
!!! ACTCCCCTTATTTTCAAGGT+CGG + chr6_3:7074656-7074675 None:intergenic 40.0%
!!! CCTAACTCCCCTTATTTTCA+AGG + chr6_3:7074660-7074679 None:intergenic 40.0%
CCTTGAAAATAAGGGGAGTT+AGG - chr6_3:7074657-7074676 Msa0936380:five_prime_UTR 40.0%
! TTACTATAGGTTGGGGAGAG+AGG - chr6_3:7071118-7071137 Msa0936380:three_prime_UTR 45.0%
AGAGAGGAGTTCAGATGTCA+GGG - chr6_3:7071134-7071153 Msa0936380:three_prime_UTR 45.0%
TAAGCGGTGAGCAATGATGA+TGG + chr6_3:7071305-7071324 None:intergenic 45.0%
!! AGTTTGTTGGAGACGAACGA+GGG + chr6_3:7071434-7071453 None:intergenic 45.0%
!! TAGTTTGTTGGAGACGAACG+AGG + chr6_3:7071435-7071454 None:intergenic 45.0%
TTCAACTCAATGACGCATGG+TGG - chr6_3:7071550-7071569 Msa0936380:CDS 45.0%
TCAAGGTTCCTTCGTTTCGA+AGG - chr6_3:7071683-7071702 Msa0936380:CDS 45.0%
TCCTTCGTTTCGAAGGTTGT+TGG - chr6_3:7071690-7071709 Msa0936380:CDS 45.0%
TGGCAATGAATGTACCAGAG+TGG - chr6_3:7071710-7071729 Msa0936380:CDS 45.0%
AAACATGCTTGCTTCCACTC+TGG + chr6_3:7071727-7071746 None:intergenic 45.0%
AGAGTGGAAGCAAGCATGTT+TGG - chr6_3:7071726-7071745 Msa0936380:CDS 45.0%
GAGTGGAAGCAAGCATGTTT+GGG - chr6_3:7071727-7071746 Msa0936380:CDS 45.0%
!! AGGGTTGGCTGTTATCTCAA+TGG - chr6_3:7071885-7071904 Msa0936380:CDS 45.0%
!! TGGGAGAGTACTTGACTAAG+AGG - chr6_3:7071944-7071963 Msa0936380:CDS 45.0%
ACTTGCCAAAGATGCCAATG+TGG - chr6_3:7072056-7072075 Msa0936380:CDS 45.0%
ACATTCATCTTGGGCCTTGA+TGG + chr6_3:7073143-7073162 None:intergenic 45.0%
! CAATCCTGGTTTGCAGGTAT+TGG - chr6_3:7073283-7073302 Msa0936380:intron 45.0%
AAGTCCAATACCTGCAAACC+AGG + chr6_3:7073290-7073309 None:intergenic 45.0%
!!! GTACTTGGGCATTGGACTTT+TGG - chr6_3:7073335-7073354 Msa0936380:intron 45.0%
!!! TGGGCATTGGACTTTTGGTA+TGG - chr6_3:7073340-7073359 Msa0936380:intron 45.0%
! GCATTGGACTTTTGGTATGG+TGG - chr6_3:7073343-7073362 Msa0936380:intron 45.0%
GCAAGGTTATATCTCGGCTA+AGG - chr6_3:7073378-7073397 Msa0936380:intron 45.0%
GGAAGAGTTATTGCTGATGC+CGG - chr6_3:7073436-7073455 Msa0936380:intron 45.0%
ATCGAGCCCGATGATTTAGA+AGG - chr6_3:7073535-7073554 Msa0936380:intron 45.0%
TGCAGGAAAATCAACGGCTT+TGG - chr6_3:7073666-7073685 Msa0936380:intron 45.0%
! GGAAAATCAACGGCTTTGGT+AGG - chr6_3:7073670-7073689 Msa0936380:intron 45.0%
GATACACTGTGTGGTGATAG+AGG - chr6_3:7073979-7073998 Msa0936380:CDS 45.0%
TGGCTCCGACCTTGAAAATA+AGG - chr6_3:7074648-7074667 Msa0936380:five_prime_UTR 45.0%
GGCTCCGACCTTGAAAATAA+GGG - chr6_3:7074649-7074668 Msa0936380:five_prime_UTR 45.0%
GCTCCGACCTTGAAAATAAG+GGG - chr6_3:7074650-7074669 Msa0936380:five_prime_UTR 45.0%
AATAAGGGGAGTTAGGGAGA+TGG - chr6_3:7074664-7074683 Msa0936380:five_prime_UTR 45.0%
!! TAATAAATATAATAAGAAAA+AGG - chr6_3:7071654-7071673 Msa0936380:CDS 5.0%
!!! AATAATCTTATTATTTTTTT+TGG - chr6_3:7072716-7072735 Msa0936380:CDS 5.0%
!!! TGTTTTAAAAAAATTTTAAT+GGG + chr6_3:7072912-7072931 None:intergenic 5.0%
!!! TTGTTTTAAAAAAATTTTAA+TGG + chr6_3:7072913-7072932 None:intergenic 5.0%
GAGAGAGGAGTTCAGATGTC+AGG - chr6_3:7071133-7071152 Msa0936380:three_prime_UTR 50.0%
GAGAGGAGTTCAGATGTCAG+GGG - chr6_3:7071135-7071154 Msa0936380:three_prime_UTR 50.0%
AGAGGAGTTCAGATGTCAGG+GGG - chr6_3:7071136-7071155 Msa0936380:three_prime_UTR 50.0%
TGTCAGGGGGACAAAAGCAA+AGG - chr6_3:7071149-7071168 Msa0936380:three_prime_UTR 50.0%
GCCAACAACCTTCGAAACGA+AGG + chr6_3:7071694-7071713 None:intergenic 50.0%
!! GGGTGATAGATTGGCTCTAG+TGG - chr6_3:7072970-7072989 Msa0936380:intron 50.0%
GGTGGAAAACTTGTGTCGCA+AGG - chr6_3:7073361-7073380 Msa0936380:intron 50.0%
TTGGTAGGGGAAAGTGGTTC+TGG - chr6_3:7073685-7073704 Msa0936380:CDS 50.0%
AGAGGAGTTCAACTTAGCGG+TGG - chr6_3:7073997-7074016 Msa0936380:CDS 50.0%
TATGGTTGGAAGGACAAGCG+TGG - chr6_3:7074146-7074165 Msa0936380:CDS 50.0%
CAAGCGTGGTTGTAGCACAT+AGG - chr6_3:7074160-7074179 Msa0936380:CDS 50.0%
! GCTCTAGACAAAGCCGCAGT+TGG - chr6_3:7071271-7071290 Msa0936380:three_prime_UTR 55.0%
!! GCGGTGAGCAATGATGATGG+TGG + chr6_3:7071302-7071321 None:intergenic 55.0%
TTGTTGGAGACGAACGAGGG+AGG + chr6_3:7071431-7071450 None:intergenic 55.0%
! GCTAAAGGCTCTGATGCCGT+TGG - chr6_3:7073478-7073497 Msa0936380:intron 55.0%
! ACGGCTTTGGTAGGGGAAAG+TGG - chr6_3:7073679-7073698 Msa0936380:CDS 55.0%
! GATGGTGGTGCGTCCAACTG+CGG + chr6_3:7071287-7071306 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 7071065 7074688 7071065 ID=Msa0936380;Name=Msa0936380
chr6_3 mRNA 7071065 7074688 7071065 ID=Msa0936380-mRNA-1;Parent=Msa0936380;Name=Msa0936380-mRNA-1;_AED=0.00;_eAED=0.00;_QI=83|1|1|1|1|1|2|329|777
chr6_3 exon 7071065 7072797 7071065 ID=Msa0936380-mRNA-1:exon:2296;Parent=Msa0936380-mRNA-1
chr6_3 exon 7073676 7074688 7073676 ID=Msa0936380-mRNA-1:exon:2295;Parent=Msa0936380-mRNA-1
chr6_3 five_prime_UTR 7074606 7074688 7074606 ID=Msa0936380-mRNA-1:five_prime_utr;Parent=Msa0936380-mRNA-1
chr6_3 CDS 7073676 7074605 7073676 ID=Msa0936380-mRNA-1:cds;Parent=Msa0936380-mRNA-1
chr6_3 CDS 7071394 7072797 7071394 ID=Msa0936380-mRNA-1:cds;Parent=Msa0936380-mRNA-1
chr6_3 three_prime_UTR 7071065 7071393 7071065 ID=Msa0936380-mRNA-1:three_prime_utr;Parent=Msa0936380-mRNA-1
Gene Sequence

>Msa0936380

ATGTCAGGGGGACAAAAGCAAAGGATTGCCATTGCAAGAGCCATAATAAAAATGCCGAAAATTCTATTACTAGATGAAGCAACAAGTGCACTTGATTCTGAATCCGAACGAGTTGTTCAAGAAGCTCTAGACAAAGCCGCAGTTGGACGCACCACCATCATCATTGCTCACCGCTTATCAACCATCCAAAATGCAGACATCATTGCAGTTGTCCAAAATGGTAAGATCATGGAAACGGGATCTCACGAAAGCCTCATGCAAAATGAAAATTCTCTTTACACCTCCCTCGTTCGTCTCCAACAAACTAGAAATGACCAAAGTGATGACACTCCATCTATCATGAATAGAGGATACATGCAAAACACGAGTAGTCGTAGACTAGTGAGTCGTTCTAGTAGCTCTTTCAACTCAATGACGCATGGTGGTGATGATATCCTTAATTATAACAATGTTGTTGAAGATATTGTTAATAATGCTGTTGTGGTTGATTATCATAATAATAATGATAATAAATATAATAAGAAAAAGGAGAAAGTCAAGGTTCCTTCGTTTCGAAGGTTGTTGGCAATGAATGTACCAGAGTGGAAGCAAGCATGTTTGGGTTGTATAAATGCGGTTTTATTTGGTGCAATTCAACCTGTATATTCGTTTGCATTGGGGTCGGTTGTATCAGTTTATTTTCTGGAGGACCATGATGAGATCAAGAAGCAAATTAGGATCTATATATTTTGTTTTCTAGGGTTGGCTGTTATCTCAATGGTTGTTAATGTGCTTCAACATTATAGCTTTGCTTACATGGGAGAGTACTTGACTAAGAGGATTAGAGAAAGAATGTTTTCCAAGATACTCACATTTGAAGTTGGTTGGTTTGATGAGGATCAAAATTCTACAGGTTCTGTTTGCTCTAGACTTGCCAAAGATGCCAATGTGGTAAGATCTTTGGTGGGTGATAGATTGGCTCTAGTGGTACAAACAATTTCAGCAGTGGTAATAGCATTCACAATGGGACTAATCATTGCATGGAGACTAGCCATTGTTATGATAGCAGTTCAACCAGTTATCATATGTTGTTTCTATACAAGGCGTGTCCTTCTTAAGAACATGTCAAGTAAAGCCATCAAGGCCCAAGATGAATGTAGCAAAATAGCTGCTGAAGCTGTTTCAAATCTAAGAACCATCAATGCTTTTTCATCTCAAGATAGAATTCTAAAAATACTGGAAAAAGCACAACAAGGACCAAGTCATGAAAGTATTAGACAATCCTGGTTTGCAGGTATTGGACTTGCATGTTCACAAAGTCTCAATTTTTGTACTTGGGCATTGGACTTTTGGTATGGTGGAAAACTTGTGTCGCAAGGTTATATCTCGGCTAAGGCGTTATTTGAGACTTTTATGATTTTGGTAAGTACAGGAAGAGTTATTGCTGATGCCGGTAGCATGACGAATGATCTTGCTAAAGGCTCTGATGCCGTTGGATCAGTTTTTGCAATCCTCGATAGGTATACAAAAATCGAGCCCGATGATTTAGAAGGTTACAAAGCTGAAAAATTAATAGGAAAAATTGAACTTCGTGATGTATATTTTGCATATCCAGGTAGACCTAATGTTATGATTTTTCAAGGGTTCTCGATTAAAATTGATGCAGGAAAATCAACGGCTTTGGTAGGGGAAAGTGGTTCTGGAAAATCGACAATCATAGGACTAATTGAGAGATTCTATGATCCACTTAATGGGATAGTGACAATTGACGGTAGAGACATAAAGACATATAATCTTAGGTCATTGAGGAAACACATTGCTCTTGTGAGTCAAGAACCAACATTGTTTAGTGGTACCATAAGGGAAAATATTGCATATGGAGCATATGATGATACAGTTGATGAGAGTGAGATTATAGAGGCATCAAAGGCTTCAAATGCTCATGATTTTGTATCAAGCTTAAAAGATGGTTATGATACACTGTGTGGTGATAGAGGAGTTCAACTTAGCGGTGGTCAAAAACAAAGAATTGCAATAGCTAGAGCTATATTGAAGAATCCAGAAGTGTTGCTTTTGGATGAAGCAACAAGTGCACTTGATAGTCAATCAGAGAAATTAGTCCAAGAAGCTTTAGAAAGGGTTATGGTTGGAAGGACAAGCGTGGTTGTAGCACATAGGTTGAGTACTATACAAAATTGTGATTTGATTGCTGTTTTGGATAAGGGAAGTGTTGTTGAGAAAGGAACACATTCATCTTTGTTGTCTAAAGGGTCAAGTGGAGCTTATTACTCTTTGGTAAGTCTACAAAGAAGACCAACCAACCTAATTGTTGATTCTTCACATGAAATCAACTAG
Protein sequence

>Msa0936380

MSGGQKQRIAIARAIIKMPKILLLDEATSALDSESERVVQEALDKAAVGRTTIIIAHRLSTIQNADIIAVVQNGKIMETGSHESLMQNENSLYTSLVRLQQTRNDQSDDTPSIMNRGYMQNTSSRRLVSRSSSSFNSMTHGGDDILNYNNVVEDIVNNAVVVDYHNNNDNKYNKKKEKVKVPSFRRLLAMNVPEWKQACLGCINAVLFGAIQPVYSFALGSVVSVYFLEDHDEIKKQIRIYIFCFLGLAVISMVVNVLQHYSFAYMGEYLTKRIRERMFSKILTFEVGWFDEDQNSTGSVCSRLAKDANVVRSLVGDRLALVVQTISAVVIAFTMGLIIAWRLAIVMIAVQPVIICCFYTRRVLLKNMSSKAIKAQDECSKIAAEAVSNLRTINAFSSQDRILKILEKAQQGPSHESIRQSWFAGIGLACSQSLNFCTWALDFWYGGKLVSQGYISAKALFETFMILVSTGRVIADAGSMTNDLAKGSDAVGSVFAILDRYTKIEPDDLEGYKAEKLIGKIELRDVYFAYPGRPNVMIFQGFSIKIDAGKSTALVGESGSGKSTIIGLIERFYDPLNGIVTIDGRDIKTYNLRSLRKHIALVSQEPTLFSGTIRENIAYGAYDDTVDESEIIEASKASNAHDFVSSLKDGYDTLCGDRGVQLSGGQKQRIAIARAILKNPEVLLLDEATSALDSQSEKLVQEALERVMVGRTSVVVAHRLSTIQNCDLIAVLDKGSVVEKGTHSSLLSKGSSGAYYSLVSLQRRPTNLIVDSSHEIN*