Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1344460 | XP_013469976.2 | 98.810 | 84 | 1 | 0 | 1 | 84 | 1 | 84 | 1.75e-44 | 151 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1344460 | A0A5N6QNR4 | 77.108 | 83 | 17 | 2 | 1 | 83 | 1 | 81 | 1.58e-24 | 99.8 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036560 | Msa1344460 | -0.807483 | 4.944251e-50 | -8.615850e-47 |
| Msa1344460 | Msa1392650 | -0.834836 | 2.380316e-56 | -8.615850e-47 |
| Msa1344460 | Msa1400940 | 0.812099 | 5.026755e-51 | -8.615850e-47 |
| Msa1344460 | Msa1402340 | -0.820342 | 7.214814e-53 | -8.615850e-47 |
| Msa1344460 | Msa1412450 | -0.834274 | 3.294465e-56 | -8.615850e-47 |
| Msa1344460 | Msa1427900 | -0.834443 | 2.987901e-56 | -8.615850e-47 |
| Msa0624890 | Msa1344460 | -0.800543 | 1.371793e-48 | -8.615850e-47 |
| Msa0641970 | Msa1344460 | -0.801721 | 7.877175e-49 | -8.615850e-47 |
| Msa0714230 | Msa1344460 | -0.824732 | 6.882674e-54 | -8.615850e-47 |
| Msa0136010 | Msa1344460 | 0.992365 | 7.434833e-193 | -8.615850e-47 |
| Msa0139280 | Msa1344460 | -0.805916 | 1.059254e-49 | -8.615850e-47 |
| Msa0176610 | Msa1344460 | -0.807492 | 4.923001e-50 | -8.615850e-47 |
| Msa0232170 | Msa1344460 | -0.806700 | 7.243173e-50 | -8.615850e-47 |
| Msa1251240 | Msa1344460 | 0.813954 | 1.970191e-51 | -8.615850e-47 |
| Msa1258600 | Msa1344460 | 0.808399 | 3.157263e-50 | -8.615850e-47 |
| Msa1264300 | Msa1344460 | -0.822354 | 2.478172e-53 | -8.615850e-47 |
| Msa1334350 | Msa1344460 | -0.818778 | 1.641195e-52 | -8.615850e-47 |
| Msa0421690 | Msa1344460 | 0.814515 | 1.481745e-51 | -8.615850e-47 |
| Msa1044520 | Msa1344460 | -0.806882 | 6.627336e-50 | -8.615850e-47 |
| Msa1067040 | Msa1344460 | 0.801910 | 7.204137e-49 | -8.615850e-47 |
| Msa0294650 | Msa1344460 | -0.800886 | 1.167865e-48 | -8.615850e-47 |
| Msa1153260 | Msa1344460 | -0.800617 | 1.325068e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 70 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGAAATGAAAGTGATTA+TGG | 0.336056 | tig0006807:+76299 | Msa1344460:intron |
| ACAAATGAAATTTCATATAA+AGG | 0.340432 | tig0006807:-77811 | None:intergenic |
| ACCGACCAATCCTGTGAATT+AGG | 0.346868 | tig0006807:-77762 | None:intergenic |
| TACCCGGCGCCGGAGACTTA+TGG | 0.351875 | tig0006807:+75998 | Msa1344460:CDS |
| GAGAAGAGAAAGTTGGAAAT+GGG | 0.352471 | tig0006807:-75755 | None:intergenic |
| CAGATCAAGCGGTGCGATCT+TGG | 0.367700 | tig0006807:+76334 | Msa1344460:CDS |
| AGACATTACTTTGCACAGAT+TGG | 0.375088 | tig0006807:+77596 | Msa1344460:CDS |
| CCACCTCGTCAGCAAAATTC+AGG | 0.380629 | tig0006807:+76148 | Msa1344460:CDS |
| ACAAGGTTACCCTCCACAAC+AGG | 0.383576 | tig0006807:+76054 | Msa1344460:CDS |
| GAATAGAGGATGGACCTTGC+TGG | 0.394206 | tig0006807:-75845 | None:intergenic |
| AGAGAAGAGAAAGTTGGAAA+TGG | 0.398970 | tig0006807:-75756 | None:intergenic |
| TCAAGGCTATCCTCCACAAC+AGG | 0.403285 | tig0006807:+76087 | Msa1344460:CDS |
| TGGTTGTAGTAACTCATTGT+GGG | 0.411137 | tig0006807:-75795 | None:intergenic |
| TCTCTGCTGTTGCTGTCTCT+TGG | 0.422721 | tig0006807:+77557 | Msa1344460:CDS |
| CAGCAAAATTCAGGCGGTGC+TGG | 0.441154 | tig0006807:+76157 | Msa1344460:CDS |
| TTTCCATAAGTCTCCGGCGC+CGG | 0.444590 | tig0006807:-76001 | None:intergenic |
| TTCCATAAGTCTCCGGCGCC+GGG | 0.453331 | tig0006807:-76000 | None:intergenic |
| AATAGAGGATGGACCTTGCT+GGG | 0.456352 | tig0006807:-75844 | None:intergenic |
| CGCCGACGGGCGGTTGCTGT+TGG | 0.456584 | tig0006807:-75815 | None:intergenic |
| TTTCGTACTGCCTAATTCAC+AGG | 0.460541 | tig0006807:+77752 | Msa1344460:three_prime_UTR |
| CATGGAATTAATAGGTTACC+CGG | 0.471275 | tig0006807:+75982 | Msa1344460:intron |
| GTGCTGGTTGCATGGAAGGC+TGG | 0.477733 | tig0006807:+76173 | Msa1344460:CDS |
| GGCGGTGCTGGTTGCATGGA+AGG | 0.485634 | tig0006807:+76169 | Msa1344460:CDS |
| TAGTGGAGAGAAGAGAAAGT+TGG | 0.493429 | tig0006807:-75762 | None:intergenic |
| TACTGCCTAATTCACAGGAT+TGG | 0.494829 | tig0006807:+77757 | Msa1344460:three_prime_UTR |
| TAACCTTGTGGAGGATATCC+TGG | 0.496681 | tig0006807:-76040 | None:intergenic |
| GAATTAGGCAGTACGAAAGT+TGG | 0.503589 | tig0006807:-77747 | None:intergenic |
| TTCAGGCGGTGCTGGTTGCA+TGG | 0.511069 | tig0006807:+76165 | Msa1344460:CDS |
| TGCTGGGGAGGAACGCCGAC+GGG | 0.513380 | tig0006807:-75828 | None:intergenic |
| AAGGTAACAAGCATCGCAAA+AGG | 0.524557 | tig0006807:-77792 | None:intergenic |
| GCCTAATTCACAGGATTGGT+CGG | 0.530936 | tig0006807:+77761 | Msa1344460:three_prime_UTR |
| GTTGTAGTAACTCATTGTGG+GGG | 0.541005 | tig0006807:-75793 | None:intergenic |
| TGCGGTGGGTAGCCCTGTTG+TGG | 0.549001 | tig0006807:-76100 | None:intergenic |
| GGTTGTAGTAACTCATTGTG+GGG | 0.550225 | tig0006807:-75794 | None:intergenic |
| AGAAGAGAAAGTTGGAAATG+GGG | 0.551961 | tig0006807:-75754 | None:intergenic |
| GAGGATGGACCTTGCTGGGG+AGG | 0.552104 | tig0006807:-75840 | None:intergenic |
| TTGCTGGGGAGGAACGCCGA+CGG | 0.554888 | tig0006807:-75829 | None:intergenic |
| TGTGGAGGATATCCTGGTGG+AGG | 0.557895 | tig0006807:-76034 | None:intergenic |
| TGAGGTGGATAGCCCTGTTG+TGG | 0.565061 | tig0006807:-76067 | None:intergenic |
| ATTAATAGGTTACCCGGCGC+CGG | 0.567543 | tig0006807:+75988 | Msa1344460:intron |
| GCGATCTTGGAATTGATCGC+TGG | 0.570477 | tig0006807:+76347 | Msa1344460:CDS |
| TTGGTTGTAGTAACTCATTG+TGG | 0.572996 | tig0006807:-75796 | None:intergenic |
| GTCGGCGTTCCTCCCCAGCA+AGG | 0.585619 | tig0006807:+75831 | Msa1344460:CDS |
| TGGGGAGGAACGCCGACGGG+CGG | 0.586625 | tig0006807:-75825 | None:intergenic |
| TTCCGCAAAACAAAACAGAT+CGG | 0.587583 | tig0006807:+75715 | None:intergenic |
| TGAAATGAAAGTGATTATGG+AGG | 0.588024 | tig0006807:+76302 | Msa1344460:intron |
| GGTGGATAGCCCTGTTGTGG+AGG | 0.592582 | tig0006807:-76064 | None:intergenic |
| TACTGAGGAGCATATTGCGG+TGG | 0.605867 | tig0006807:-76115 | None:intergenic |
| AACCAACAGCAACCGCCCGT+CGG | 0.612199 | tig0006807:+75813 | Msa1344460:CDS |
| TTGTAGTAACTCATTGTGGG+GGG | 0.615172 | tig0006807:-75792 | None:intergenic |
| GTGGAGGATATCCTGGTGGA+GGG | 0.625281 | tig0006807:-76033 | None:intergenic |
| GGATATTCATTCAGATCAAG+CGG | 0.635143 | tig0006807:+76323 | Msa1344460:CDS |
| AAAGATGCTTACCCTCCACC+AGG | 0.636903 | tig0006807:+76022 | Msa1344460:CDS |
| CAACAGGGCTATCCACCTCA+AGG | 0.638659 | tig0006807:+76070 | Msa1344460:CDS |
| GGTGGTGGCTGAGCGTACTG+AGG | 0.643562 | tig0006807:-76130 | None:intergenic |
| ACTGAGGAGCATATTGCGGT+GGG | 0.646934 | tig0006807:-76114 | None:intergenic |
| ATCTTGGAATTGATCGCTGG+TGG | 0.649111 | tig0006807:+76350 | Msa1344460:CDS |
| TGTTGTGGAGGGTAACCTTG+TGG | 0.649835 | tig0006807:-76052 | None:intergenic |
| ATAGAGGATGGACCTTGCTG+GGG | 0.654237 | tig0006807:-75843 | None:intergenic |
| GTGGATAGCCCTGTTGTGGA+GGG | 0.654497 | tig0006807:-76063 | None:intergenic |
| CAAGGTTACCCTCCACAACA+GGG | 0.654753 | tig0006807:+76055 | Msa1344460:CDS |
| CCACCAGGATATCCTCCACA+AGG | 0.654889 | tig0006807:+76037 | Msa1344460:CDS |
| CAAGGCTATCCTCCACAACA+GGG | 0.660569 | tig0006807:+76088 | Msa1344460:CDS |
| GGTGGGTAGCCCTGTTGTGG+AGG | 0.665741 | tig0006807:-76097 | None:intergenic |
| GCGTACTGAGGAGCATATTG+CGG | 0.667195 | tig0006807:-76118 | None:intergenic |
| TGTTGTGGAGGATAGCCTTG+AGG | 0.680004 | tig0006807:-76085 | None:intergenic |
| TGTGGAGGATAGCCTTGAGG+TGG | 0.684209 | tig0006807:-76082 | None:intergenic |
| CCTCGTCAGCAAAATTCAGG+CGG | 0.710460 | tig0006807:+76151 | Msa1344460:CDS |
| CCTTGTGGAGGATATCCTGG+TGG | 0.714352 | tig0006807:-76037 | None:intergenic |
| TGTGGAGGGTAACCTTGTGG+AGG | 0.722140 | tig0006807:-76049 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTCAATTTTTAACTT+GGG | - | tig0006807:76263-76282 | None:intergenic | 10.0% |
| !!! | TTTAATTTCAATTTTTAACT+TGG | - | tig0006807:76264-76283 | None:intergenic | 10.0% |
| !! | AAATTGAAATTAAAATTGAA+TGG | + | tig0006807:76270-76289 | Msa1344460:intron | 10.0% |
| !!! | TTAATTTCAATTTTTAACTT+GGG | - | tig0006807:76263-76282 | None:intergenic | 10.0% |
| !!! | TTTAATTTCAATTTTTAACT+TGG | - | tig0006807:76264-76283 | None:intergenic | 10.0% |
| !! | AAATTGAAATTAAAATTGAA+TGG | + | tig0006807:76270-76289 | Msa1344460:intron | 10.0% |
| !!! | TTTTTCTTTCTTTATTTTTG+TGG | + | tig0006807:76450-76469 | Msa1344460:intron | 15.0% |
| !!! | TTTTCTTTCTTTATTTTTGT+GGG | + | tig0006807:76451-76470 | Msa1344460:intron | 15.0% |
| !!! | TTTTAATAGCTTGTTAATTT+AGG | - | tig0006807:76547-76566 | None:intergenic | 15.0% |
| !! | AACAAGCTATTAAAAATTAA+AGG | + | tig0006807:76552-76571 | Msa1344460:intron | 15.0% |
| !! | ATAATGCAAATATTCTAAAT+AGG | - | tig0006807:76676-76695 | None:intergenic | 15.0% |
| !! | AAAAGAATAAGAAACTAATA+AGG | - | tig0006807:77396-77415 | None:intergenic | 15.0% |
| !!! | TTATTAGTTTCTTATTCTTT+TGG | + | tig0006807:77395-77414 | Msa1344460:intron | 15.0% |
| !! | ACAAATGAAATTTCATATAA+AGG | - | tig0006807:77814-77833 | None:intergenic | 15.0% |
| !!! | TTTTTCTTTCTTTATTTTTG+TGG | + | tig0006807:76450-76469 | Msa1344460:intron | 15.0% |
| !!! | TTTTCTTTCTTTATTTTTGT+GGG | + | tig0006807:76451-76470 | Msa1344460:intron | 15.0% |
| !!! | TTTTAATAGCTTGTTAATTT+AGG | - | tig0006807:76547-76566 | None:intergenic | 15.0% |
| !! | AACAAGCTATTAAAAATTAA+AGG | + | tig0006807:76552-76571 | Msa1344460:intron | 15.0% |
| !! | ATAATGCAAATATTCTAAAT+AGG | - | tig0006807:76676-76695 | None:intergenic | 15.0% |
| !! | AAAAGAATAAGAAACTAATA+AGG | - | tig0006807:77396-77415 | None:intergenic | 15.0% |
| !!! | TTATTAGTTTCTTATTCTTT+TGG | + | tig0006807:77395-77414 | Msa1344460:intron | 15.0% |
| !! | ACAAATGAAATTTCATATAA+AGG | - | tig0006807:77814-77833 | None:intergenic | 15.0% |
| !! | AATTTGCAAACAGAAAATTA+AGG | - | tig0006807:76233-76252 | None:intergenic | 20.0% |
| !! | AAATGAAATGAAAGTGATTA+TGG | + | tig0006807:76299-76318 | Msa1344460:intron | 20.0% |
| !! | CTTAAAATATATAAGTCAAG+TGG | + | tig0006807:76974-76993 | Msa1344460:intron | 20.0% |
| !! | ACAATACTAGTATACTAAAA+AGG | + | tig0006807:77100-77119 | Msa1344460:intron | 20.0% |
| !! | TTGACAAACAGAAATTAATA+AGG | - | tig0006807:77428-77447 | None:intergenic | 20.0% |
| !! | TCAAAAACCTTATTAATTTC+TGG | + | tig0006807:77444-77463 | Msa1344460:intron | 20.0% |
| !! | AATTTGCAAACAGAAAATTA+AGG | - | tig0006807:76233-76252 | None:intergenic | 20.0% |
| !! | AAATGAAATGAAAGTGATTA+TGG | + | tig0006807:76299-76318 | Msa1344460:intron | 20.0% |
| !! | CTTAAAATATATAAGTCAAG+TGG | + | tig0006807:76974-76993 | Msa1344460:intron | 20.0% |
| !! | ACAATACTAGTATACTAAAA+AGG | + | tig0006807:77100-77119 | Msa1344460:intron | 20.0% |
| !! | TTGACAAACAGAAATTAATA+AGG | - | tig0006807:77428-77447 | None:intergenic | 20.0% |
| !! | TCAAAAACCTTATTAATTTC+TGG | + | tig0006807:77444-77463 | Msa1344460:intron | 20.0% |
| ! | GTGTATAATATATATGCATG+CGG | - | tig0006807:75875-75894 | None:intergenic | 25.0% |
| ! | AAGATGATAAATTAACATGC+AGG | - | tig0006807:75910-75929 | None:intergenic | 25.0% |
| ! | GTTTCAATTAAGTGATTTCA+TGG | + | tig0006807:75964-75983 | Msa1344460:intron | 25.0% |
| ! | AGTGATTTCATGGAATTAAT+AGG | + | tig0006807:75974-75993 | Msa1344460:intron | 25.0% |
| ! | TTGAACTTAAGATAGTAGAT+TGG | - | tig0006807:76496-76515 | None:intergenic | 25.0% |
| !!! | AGTAGGTTGGTTTTAATTTT+AGG | - | tig0006807:76593-76612 | None:intergenic | 25.0% |
| ! | ATTGTTTATAGTTGTTGAGT+AGG | - | tig0006807:76610-76629 | None:intergenic | 25.0% |
| ! | CTAAATAGGTCAAGTAATAT+GGG | - | tig0006807:76662-76681 | None:intergenic | 25.0% |
| ! | TCTAAATAGGTCAAGTAATA+TGG | - | tig0006807:76663-76682 | None:intergenic | 25.0% |
| ! | AAATATATAAGTCAAGTGGA+AGG | + | tig0006807:76978-76997 | Msa1344460:intron | 25.0% |
| ! | AATATATAAGTCAAGTGGAA+GGG | + | tig0006807:76979-76998 | Msa1344460:intron | 25.0% |
| ! | AAAGAACAAAGATAAACGTA+TGG | - | tig0006807:77255-77274 | None:intergenic | 25.0% |
| ! | AATGCAAATGTAACAATTCT+TGG | + | tig0006807:77297-77316 | Msa1344460:intron | 25.0% |
| ! | CAGAAAACCAGAAATTAATA+AGG | - | tig0006807:77454-77473 | None:intergenic | 25.0% |
| ! | GTGTATAATATATATGCATG+CGG | - | tig0006807:75875-75894 | None:intergenic | 25.0% |
| ! | AAGATGATAAATTAACATGC+AGG | - | tig0006807:75910-75929 | None:intergenic | 25.0% |
| ! | GTTTCAATTAAGTGATTTCA+TGG | + | tig0006807:75964-75983 | Msa1344460:intron | 25.0% |
| ! | AGTGATTTCATGGAATTAAT+AGG | + | tig0006807:75974-75993 | Msa1344460:intron | 25.0% |
| ! | TTGAACTTAAGATAGTAGAT+TGG | - | tig0006807:76496-76515 | None:intergenic | 25.0% |
| !!! | AGTAGGTTGGTTTTAATTTT+AGG | - | tig0006807:76593-76612 | None:intergenic | 25.0% |
| ! | ATTGTTTATAGTTGTTGAGT+AGG | - | tig0006807:76610-76629 | None:intergenic | 25.0% |
| ! | CTAAATAGGTCAAGTAATAT+GGG | - | tig0006807:76662-76681 | None:intergenic | 25.0% |
| ! | TCTAAATAGGTCAAGTAATA+TGG | - | tig0006807:76663-76682 | None:intergenic | 25.0% |
| ! | AAATATATAAGTCAAGTGGA+AGG | + | tig0006807:76978-76997 | Msa1344460:intron | 25.0% |
| ! | AATATATAAGTCAAGTGGAA+GGG | + | tig0006807:76979-76998 | Msa1344460:intron | 25.0% |
| ! | AAAGAACAAAGATAAACGTA+TGG | - | tig0006807:77255-77274 | None:intergenic | 25.0% |
| ! | AATGCAAATGTAACAATTCT+TGG | + | tig0006807:77297-77316 | Msa1344460:intron | 25.0% |
| ! | CAGAAAACCAGAAATTAATA+AGG | - | tig0006807:77454-77473 | None:intergenic | 25.0% |
| TGAAATGAAAGTGATTATGG+AGG | + | tig0006807:76302-76321 | Msa1344460:intron | 30.0% | |
| ATAACGTGACGAAAGATAAT+AGG | - | tig0006807:76409-76428 | None:intergenic | 30.0% | |
| ATTGGTATATCCGATGATAT+GGG | - | tig0006807:76478-76497 | None:intergenic | 30.0% | |
| TTTATAGTTGTTGAGTAGGT+TGG | - | tig0006807:76606-76625 | None:intergenic | 30.0% | |
| AGAAAAATAGAGTCAAAGCA+TGG | - | tig0006807:76706-76725 | None:intergenic | 30.0% | |
| TCAACTAGGTCAAGTAATAT+GGG | + | tig0006807:76875-76894 | Msa1344460:intron | 30.0% | |
| ATATATAAGTCAAGTGGAAG+GGG | + | tig0006807:76980-76999 | Msa1344460:intron | 30.0% | |
| ! | GACAATATACCATTTCTAGA+TGG | - | tig0006807:77055-77074 | None:intergenic | 30.0% |
| ! | TGGTATATTGTCTTGTTCAA+CGG | + | tig0006807:77063-77082 | Msa1344460:intron | 30.0% |
| CTAGTATACTAAAAAGGTGA+AGG | + | tig0006807:77106-77125 | Msa1344460:intron | 30.0% | |
| ! | CGTTTATCTTTGTTCTTTTG+TGG | + | tig0006807:77257-77276 | Msa1344460:intron | 30.0% |
| TTTGTATAACTGGAAATAGG+TGG | - | tig0006807:77360-77379 | None:intergenic | 30.0% | |
| GTGTTTGTATAACTGGAAAT+AGG | - | tig0006807:77363-77382 | None:intergenic | 30.0% | |
| TGAAATGAAAGTGATTATGG+AGG | + | tig0006807:76302-76321 | Msa1344460:intron | 30.0% | |
| ATAACGTGACGAAAGATAAT+AGG | - | tig0006807:76409-76428 | None:intergenic | 30.0% | |
| ATTGGTATATCCGATGATAT+GGG | - | tig0006807:76478-76497 | None:intergenic | 30.0% | |
| TTTATAGTTGTTGAGTAGGT+TGG | - | tig0006807:76606-76625 | None:intergenic | 30.0% | |
| AGAAAAATAGAGTCAAAGCA+TGG | - | tig0006807:76706-76725 | None:intergenic | 30.0% | |
| TCAACTAGGTCAAGTAATAT+GGG | + | tig0006807:76875-76894 | Msa1344460:intron | 30.0% | |
| ATATATAAGTCAAGTGGAAG+GGG | + | tig0006807:76980-76999 | Msa1344460:intron | 30.0% | |
| ! | GACAATATACCATTTCTAGA+TGG | - | tig0006807:77055-77074 | None:intergenic | 30.0% |
| ! | TGGTATATTGTCTTGTTCAA+CGG | + | tig0006807:77063-77082 | Msa1344460:intron | 30.0% |
| CTAGTATACTAAAAAGGTGA+AGG | + | tig0006807:77106-77125 | Msa1344460:intron | 30.0% | |
| ! | CGTTTATCTTTGTTCTTTTG+TGG | + | tig0006807:77257-77276 | Msa1344460:intron | 30.0% |
| TTTGTATAACTGGAAATAGG+TGG | - | tig0006807:77360-77379 | None:intergenic | 30.0% | |
| GTGTTTGTATAACTGGAAAT+AGG | - | tig0006807:77363-77382 | None:intergenic | 30.0% | |
| AGAAGAGAAAGTTGGAAATG+GGG | - | tig0006807:75757-75776 | None:intergenic | 35.0% | |
| GAGAAGAGAAAGTTGGAAAT+GGG | - | tig0006807:75758-75777 | None:intergenic | 35.0% | |
| AGAGAAGAGAAAGTTGGAAA+TGG | - | tig0006807:75759-75778 | None:intergenic | 35.0% | |
| TGGTTGTAGTAACTCATTGT+GGG | - | tig0006807:75798-75817 | None:intergenic | 35.0% | |
| TTGGTTGTAGTAACTCATTG+TGG | - | tig0006807:75799-75818 | None:intergenic | 35.0% | |
| CATGGAATTAATAGGTTACC+CGG | + | tig0006807:75982-76001 | Msa1344460:intron | 35.0% | |
| TAAGGAACAATCCAGAAAGA+TGG | - | tig0006807:76215-76234 | None:intergenic | 35.0% | |
| GGATATTCATTCAGATCAAG+CGG | + | tig0006807:76323-76342 | Msa1344460:CDS | 35.0% | |
| GATTGGTATATCCGATGATA+TGG | - | tig0006807:76479-76498 | None:intergenic | 35.0% | |
| ATAGGTCAAGTAATATGGGA+CGG | - | tig0006807:76658-76677 | None:intergenic | 35.0% | |
| GTCAACTAGGTCAAGTAATA+TGG | + | tig0006807:76874-76893 | Msa1344460:intron | 35.0% | |
| ! | TAAAAAGGTGAAGGTGTATG+TGG | + | tig0006807:77115-77134 | Msa1344460:intron | 35.0% |
| TACGTGTGTGTTTGTATAAC+TGG | - | tig0006807:77370-77389 | None:intergenic | 35.0% | |
| CAGATCAGATTACATCACAT+TGG | - | tig0006807:77503-77522 | None:intergenic | 35.0% | |
| AGACATTACTTTGCACAGAT+TGG | + | tig0006807:77596-77615 | Msa1344460:CDS | 35.0% | |
| AGAAGAGAAAGTTGGAAATG+GGG | - | tig0006807:75757-75776 | None:intergenic | 35.0% | |
| GAGAAGAGAAAGTTGGAAAT+GGG | - | tig0006807:75758-75777 | None:intergenic | 35.0% | |
| AGAGAAGAGAAAGTTGGAAA+TGG | - | tig0006807:75759-75778 | None:intergenic | 35.0% | |
| TGGTTGTAGTAACTCATTGT+GGG | - | tig0006807:75798-75817 | None:intergenic | 35.0% | |
| TTGGTTGTAGTAACTCATTG+TGG | - | tig0006807:75799-75818 | None:intergenic | 35.0% | |
| CATGGAATTAATAGGTTACC+CGG | + | tig0006807:75982-76001 | Msa1344460:intron | 35.0% | |
| TAAGGAACAATCCAGAAAGA+TGG | - | tig0006807:76215-76234 | None:intergenic | 35.0% | |
| GGATATTCATTCAGATCAAG+CGG | + | tig0006807:76323-76342 | Msa1344460:CDS | 35.0% | |
| GATTGGTATATCCGATGATA+TGG | - | tig0006807:76479-76498 | None:intergenic | 35.0% | |
| ATAGGTCAAGTAATATGGGA+CGG | - | tig0006807:76658-76677 | None:intergenic | 35.0% | |
| GTCAACTAGGTCAAGTAATA+TGG | + | tig0006807:76874-76893 | Msa1344460:intron | 35.0% | |
| ! | TAAAAAGGTGAAGGTGTATG+TGG | + | tig0006807:77115-77134 | Msa1344460:intron | 35.0% |
| TACGTGTGTGTTTGTATAAC+TGG | - | tig0006807:77370-77389 | None:intergenic | 35.0% | |
| CAGATCAGATTACATCACAT+TGG | - | tig0006807:77503-77522 | None:intergenic | 35.0% | |
| AGACATTACTTTGCACAGAT+TGG | + | tig0006807:77596-77615 | Msa1344460:CDS | 35.0% | |
| TAGTGGAGAGAAGAGAAAGT+TGG | - | tig0006807:75765-75784 | None:intergenic | 40.0% | |
| TTGTAGTAACTCATTGTGGG+GGG | - | tig0006807:75795-75814 | None:intergenic | 40.0% | |
| GTTGTAGTAACTCATTGTGG+GGG | - | tig0006807:75796-75815 | None:intergenic | 40.0% | |
| GGTTGTAGTAACTCATTGTG+GGG | - | tig0006807:75797-75816 | None:intergenic | 40.0% | |
| ATGCGGTTAAGAATAGAGGA+TGG | - | tig0006807:75858-75877 | None:intergenic | 40.0% | |
| ATGCATGCGGTTAAGAATAG+AGG | - | tig0006807:75862-75881 | None:intergenic | 40.0% | |
| ! | GCATCTTTTCCATAAGTCTC+CGG | - | tig0006807:76010-76029 | None:intergenic | 40.0% |
| ! | TTTTGTGGGACCCATATCAT+CGG | + | tig0006807:76465-76484 | Msa1344460:intron | 40.0% |
| CTAGGTCAAGTAATATGGGT+CGG | + | tig0006807:76879-76898 | Msa1344460:intron | 40.0% | |
| TAATGATGTCAATGACGTGC+AGG | + | tig0006807:77023-77042 | Msa1344460:intron | 40.0% | |
| AATGATGTCAATGACGTGCA+GGG | + | tig0006807:77024-77043 | Msa1344460:intron | 40.0% | |
| AGGGTTTAGCCATCTAGAAA+TGG | + | tig0006807:77043-77062 | Msa1344460:intron | 40.0% | |
| GAATTAGGCAGTACGAAAGT+TGG | - | tig0006807:77750-77769 | None:intergenic | 40.0% | |
| TTTCGTACTGCCTAATTCAC+AGG | + | tig0006807:77752-77771 | Msa1344460:three_prime_UTR | 40.0% | |
| TACTGCCTAATTCACAGGAT+TGG | + | tig0006807:77757-77776 | Msa1344460:three_prime_UTR | 40.0% | |
| ! | AAGGTAACAAGCATCGCAAA+AGG | - | tig0006807:77795-77814 | None:intergenic | 40.0% |
| TAGTGGAGAGAAGAGAAAGT+TGG | - | tig0006807:75765-75784 | None:intergenic | 40.0% | |
| TTGTAGTAACTCATTGTGGG+GGG | - | tig0006807:75795-75814 | None:intergenic | 40.0% | |
| GTTGTAGTAACTCATTGTGG+GGG | - | tig0006807:75796-75815 | None:intergenic | 40.0% | |
| GGTTGTAGTAACTCATTGTG+GGG | - | tig0006807:75797-75816 | None:intergenic | 40.0% | |
| ATGCGGTTAAGAATAGAGGA+TGG | - | tig0006807:75858-75877 | None:intergenic | 40.0% | |
| ATGCATGCGGTTAAGAATAG+AGG | - | tig0006807:75862-75881 | None:intergenic | 40.0% | |
| ! | GCATCTTTTCCATAAGTCTC+CGG | - | tig0006807:76010-76029 | None:intergenic | 40.0% |
| ! | TTTTGTGGGACCCATATCAT+CGG | + | tig0006807:76465-76484 | Msa1344460:intron | 40.0% |
| CTAGGTCAAGTAATATGGGT+CGG | + | tig0006807:76879-76898 | Msa1344460:intron | 40.0% | |
| TAATGATGTCAATGACGTGC+AGG | + | tig0006807:77023-77042 | Msa1344460:intron | 40.0% | |
| AATGATGTCAATGACGTGCA+GGG | + | tig0006807:77024-77043 | Msa1344460:intron | 40.0% | |
| AGGGTTTAGCCATCTAGAAA+TGG | + | tig0006807:77043-77062 | Msa1344460:intron | 40.0% | |
| GAATTAGGCAGTACGAAAGT+TGG | - | tig0006807:77750-77769 | None:intergenic | 40.0% | |
| TTTCGTACTGCCTAATTCAC+AGG | + | tig0006807:77752-77771 | Msa1344460:three_prime_UTR | 40.0% | |
| TACTGCCTAATTCACAGGAT+TGG | + | tig0006807:77757-77776 | Msa1344460:three_prime_UTR | 40.0% | |
| ! | AAGGTAACAAGCATCGCAAA+AGG | - | tig0006807:77795-77814 | None:intergenic | 40.0% |
| AATAGAGGATGGACCTTGCT+GGG | - | tig0006807:75847-75866 | None:intergenic | 45.0% | |
| TAACCTTGTGGAGGATATCC+TGG | - | tig0006807:76043-76062 | None:intergenic | 45.0% | |
| TACTCCTCTCTCCATCTTTC+TGG | + | tig0006807:76201-76220 | Msa1344460:intron | 45.0% | |
| CAATCCAGAAAGATGGAGAG+AGG | - | tig0006807:76208-76227 | None:intergenic | 45.0% | |
| ATCTTGGAATTGATCGCTGG+TGG | + | tig0006807:76350-76369 | Msa1344460:CDS | 45.0% | |
| GTCAAGTAATATGGGACGGA+GGG | - | tig0006807:76654-76673 | None:intergenic | 45.0% | |
| CATACGTGACAGAGTCAACT+AGG | + | tig0006807:76861-76880 | Msa1344460:intron | 45.0% | |
| GTCAAGTAATATGGGTCGGA+GGG | + | tig0006807:76883-76902 | Msa1344460:intron | 45.0% | |
| TATAAGTCAAGTGGAAGGGG+TGG | + | tig0006807:76983-77002 | Msa1344460:intron | 45.0% | |
| ATAAGTCAAGTGGAAGGGGT+GGG | + | tig0006807:76984-77003 | Msa1344460:intron | 45.0% | |
| ! | GCCTAATTCACAGGATTGGT+CGG | + | tig0006807:77761-77780 | Msa1344460:three_prime_UTR | 45.0% |
| ACCGACCAATCCTGTGAATT+AGG | - | tig0006807:77765-77784 | None:intergenic | 45.0% | |
| AATAGAGGATGGACCTTGCT+GGG | - | tig0006807:75847-75866 | None:intergenic | 45.0% | |
| TAACCTTGTGGAGGATATCC+TGG | - | tig0006807:76043-76062 | None:intergenic | 45.0% | |
| TACTCCTCTCTCCATCTTTC+TGG | + | tig0006807:76201-76220 | Msa1344460:intron | 45.0% | |
| CAATCCAGAAAGATGGAGAG+AGG | - | tig0006807:76208-76227 | None:intergenic | 45.0% | |
| ATCTTGGAATTGATCGCTGG+TGG | + | tig0006807:76350-76369 | Msa1344460:CDS | 45.0% | |
| GTCAAGTAATATGGGACGGA+GGG | - | tig0006807:76654-76673 | None:intergenic | 45.0% | |
| CATACGTGACAGAGTCAACT+AGG | + | tig0006807:76861-76880 | Msa1344460:intron | 45.0% | |
| GTCAAGTAATATGGGTCGGA+GGG | + | tig0006807:76883-76902 | Msa1344460:intron | 45.0% | |
| TATAAGTCAAGTGGAAGGGG+TGG | + | tig0006807:76983-77002 | Msa1344460:intron | 45.0% | |
| ATAAGTCAAGTGGAAGGGGT+GGG | + | tig0006807:76984-77003 | Msa1344460:intron | 45.0% | |
| ! | GCCTAATTCACAGGATTGGT+CGG | + | tig0006807:77761-77780 | Msa1344460:three_prime_UTR | 45.0% |
| ACCGACCAATCCTGTGAATT+AGG | - | tig0006807:77765-77784 | None:intergenic | 45.0% | |
| !! | AATTGATATAAAATTAAAAA+AGG | - | tig0006807:77162-77181 | None:intergenic | 5.0% |
| !! | AATTGATATAAAATTAAAAA+AGG | - | tig0006807:77162-77181 | None:intergenic | 5.0% |
| TAACTCATTGTGGGGGGTAG+GGG | - | tig0006807:75789-75808 | None:intergenic | 50.0% | |
| GTAACTCATTGTGGGGGGTA+GGG | - | tig0006807:75790-75809 | None:intergenic | 50.0% | |
| AGTAACTCATTGTGGGGGGT+AGG | - | tig0006807:75791-75810 | None:intergenic | 50.0% | |
| ATAGAGGATGGACCTTGCTG+GGG | - | tig0006807:75846-75865 | None:intergenic | 50.0% | |
| GAATAGAGGATGGACCTTGC+TGG | - | tig0006807:75848-75867 | None:intergenic | 50.0% | |
| ATTAATAGGTTACCCGGCGC+CGG | + | tig0006807:75988-76007 | Msa1344460:intron | 50.0% | |
| AAAGATGCTTACCCTCCACC+AGG | + | tig0006807:76022-76041 | Msa1344460:CDS | 50.0% | |
| TGTTGTGGAGGGTAACCTTG+TGG | - | tig0006807:76055-76074 | None:intergenic | 50.0% | |
| ACAAGGTTACCCTCCACAAC+AGG | + | tig0006807:76054-76073 | Msa1344460:CDS | 50.0% | |
| CAAGGTTACCCTCCACAACA+GGG | + | tig0006807:76055-76074 | Msa1344460:CDS | 50.0% | |
| ! | TGTTGTGGAGGATAGCCTTG+AGG | - | tig0006807:76088-76107 | None:intergenic | 50.0% |
| TCAAGGCTATCCTCCACAAC+AGG | + | tig0006807:76087-76106 | Msa1344460:CDS | 50.0% | |
| CAAGGCTATCCTCCACAACA+GGG | + | tig0006807:76088-76107 | Msa1344460:CDS | 50.0% | |
| ! | ACTGAGGAGCATATTGCGGT+GGG | - | tig0006807:76117-76136 | None:intergenic | 50.0% |
| ! | TACTGAGGAGCATATTGCGG+TGG | - | tig0006807:76118-76137 | None:intergenic | 50.0% |
| ! | GCGTACTGAGGAGCATATTG+CGG | - | tig0006807:76121-76140 | None:intergenic | 50.0% |
| ! | GAATTTTGCTGACGAGGTGG+TGG | - | tig0006807:76148-76167 | None:intergenic | 50.0% |
| ! | CCTGAATTTTGCTGACGAGG+TGG | - | tig0006807:76151-76170 | None:intergenic | 50.0% |
| CCACCTCGTCAGCAAAATTC+AGG | + | tig0006807:76148-76167 | Msa1344460:CDS | 50.0% | |
| CCTCGTCAGCAAAATTCAGG+CGG | + | tig0006807:76151-76170 | Msa1344460:CDS | 50.0% | |
| GCGATCTTGGAATTGATCGC+TGG | + | tig0006807:76347-76366 | Msa1344460:CDS | 50.0% | |
| GGTCAAGTAATATGGGACGG+AGG | - | tig0006807:76655-76674 | None:intergenic | 50.0% | |
| GGTCAAGTAATATGGGTCGG+AGG | + | tig0006807:76882-76901 | Msa1344460:intron | 50.0% | |
| TCTCTGCTGTTGCTGTCTCT+TGG | + | tig0006807:77557-77576 | Msa1344460:CDS | 50.0% | |
| ! | CTCTTGGATGCGTGCTTTTG+AGG | + | tig0006807:77573-77592 | Msa1344460:CDS | 50.0% |
| TAACTCATTGTGGGGGGTAG+GGG | - | tig0006807:75789-75808 | None:intergenic | 50.0% | |
| GTAACTCATTGTGGGGGGTA+GGG | - | tig0006807:75790-75809 | None:intergenic | 50.0% | |
| AGTAACTCATTGTGGGGGGT+AGG | - | tig0006807:75791-75810 | None:intergenic | 50.0% | |
| ATAGAGGATGGACCTTGCTG+GGG | - | tig0006807:75846-75865 | None:intergenic | 50.0% | |
| GAATAGAGGATGGACCTTGC+TGG | - | tig0006807:75848-75867 | None:intergenic | 50.0% | |
| ATTAATAGGTTACCCGGCGC+CGG | + | tig0006807:75988-76007 | Msa1344460:intron | 50.0% | |
| AAAGATGCTTACCCTCCACC+AGG | + | tig0006807:76022-76041 | Msa1344460:CDS | 50.0% | |
| TGTTGTGGAGGGTAACCTTG+TGG | - | tig0006807:76055-76074 | None:intergenic | 50.0% | |
| ACAAGGTTACCCTCCACAAC+AGG | + | tig0006807:76054-76073 | Msa1344460:CDS | 50.0% | |
| CAAGGTTACCCTCCACAACA+GGG | + | tig0006807:76055-76074 | Msa1344460:CDS | 50.0% | |
| ! | TGTTGTGGAGGATAGCCTTG+AGG | - | tig0006807:76088-76107 | None:intergenic | 50.0% |
| TCAAGGCTATCCTCCACAAC+AGG | + | tig0006807:76087-76106 | Msa1344460:CDS | 50.0% | |
| CAAGGCTATCCTCCACAACA+GGG | + | tig0006807:76088-76107 | Msa1344460:CDS | 50.0% | |
| ! | ACTGAGGAGCATATTGCGGT+GGG | - | tig0006807:76117-76136 | None:intergenic | 50.0% |
| ! | TACTGAGGAGCATATTGCGG+TGG | - | tig0006807:76118-76137 | None:intergenic | 50.0% |
| ! | GCGTACTGAGGAGCATATTG+CGG | - | tig0006807:76121-76140 | None:intergenic | 50.0% |
| ! | GAATTTTGCTGACGAGGTGG+TGG | - | tig0006807:76148-76167 | None:intergenic | 50.0% |
| ! | CCTGAATTTTGCTGACGAGG+TGG | - | tig0006807:76151-76170 | None:intergenic | 50.0% |
| CCACCTCGTCAGCAAAATTC+AGG | + | tig0006807:76148-76167 | Msa1344460:CDS | 50.0% | |
| CCTCGTCAGCAAAATTCAGG+CGG | + | tig0006807:76151-76170 | Msa1344460:CDS | 50.0% | |
| GCGATCTTGGAATTGATCGC+TGG | + | tig0006807:76347-76366 | Msa1344460:CDS | 50.0% | |
| GGTCAAGTAATATGGGACGG+AGG | - | tig0006807:76655-76674 | None:intergenic | 50.0% | |
| GGTCAAGTAATATGGGTCGG+AGG | + | tig0006807:76882-76901 | Msa1344460:intron | 50.0% | |
| TCTCTGCTGTTGCTGTCTCT+TGG | + | tig0006807:77557-77576 | Msa1344460:CDS | 50.0% | |
| ! | CTCTTGGATGCGTGCTTTTG+AGG | + | tig0006807:77573-77592 | Msa1344460:CDS | 50.0% |
| AACTCATTGTGGGGGGTAGG+GGG | - | tig0006807:75788-75807 | None:intergenic | 55.0% | |
| TTTCCATAAGTCTCCGGCGC+CGG | - | tig0006807:76004-76023 | None:intergenic | 55.0% | |
| GTGGAGGATATCCTGGTGGA+GGG | - | tig0006807:76036-76055 | None:intergenic | 55.0% | |
| TGTGGAGGATATCCTGGTGG+AGG | - | tig0006807:76037-76056 | None:intergenic | 55.0% | |
| CCTTGTGGAGGATATCCTGG+TGG | - | tig0006807:76040-76059 | None:intergenic | 55.0% | |
| CCACCAGGATATCCTCCACA+AGG | + | tig0006807:76037-76056 | Msa1344460:CDS | 55.0% | |
| TGTGGAGGGTAACCTTGTGG+AGG | - | tig0006807:76052-76071 | None:intergenic | 55.0% | |
| GTGGATAGCCCTGTTGTGGA+GGG | - | tig0006807:76066-76085 | None:intergenic | 55.0% | |
| TGAGGTGGATAGCCCTGTTG+TGG | - | tig0006807:76070-76089 | None:intergenic | 55.0% | |
| CAACAGGGCTATCCACCTCA+AGG | + | tig0006807:76070-76089 | Msa1344460:CDS | 55.0% | |
| ! | TGTGGAGGATAGCCTTGAGG+TGG | - | tig0006807:76085-76104 | None:intergenic | 55.0% |
| ! | CCGCCTGAATTTTGCTGACG+AGG | - | tig0006807:76154-76173 | None:intergenic | 55.0% |
| CAGCAAAATTCAGGCGGTGC+TGG | + | tig0006807:76157-76176 | Msa1344460:CDS | 55.0% | |
| CAGATCAAGCGGTGCGATCT+TGG | + | tig0006807:76334-76353 | Msa1344460:CDS | 55.0% | |
| AACTCATTGTGGGGGGTAGG+GGG | - | tig0006807:75788-75807 | None:intergenic | 55.0% | |
| TTTCCATAAGTCTCCGGCGC+CGG | - | tig0006807:76004-76023 | None:intergenic | 55.0% | |
| GTGGAGGATATCCTGGTGGA+GGG | - | tig0006807:76036-76055 | None:intergenic | 55.0% | |
| TGTGGAGGATATCCTGGTGG+AGG | - | tig0006807:76037-76056 | None:intergenic | 55.0% | |
| CCTTGTGGAGGATATCCTGG+TGG | - | tig0006807:76040-76059 | None:intergenic | 55.0% | |
| CCACCAGGATATCCTCCACA+AGG | + | tig0006807:76037-76056 | Msa1344460:CDS | 55.0% | |
| TGTGGAGGGTAACCTTGTGG+AGG | - | tig0006807:76052-76071 | None:intergenic | 55.0% | |
| GTGGATAGCCCTGTTGTGGA+GGG | - | tig0006807:76066-76085 | None:intergenic | 55.0% | |
| TGAGGTGGATAGCCCTGTTG+TGG | - | tig0006807:76070-76089 | None:intergenic | 55.0% | |
| CAACAGGGCTATCCACCTCA+AGG | + | tig0006807:76070-76089 | Msa1344460:CDS | 55.0% | |
| ! | TGTGGAGGATAGCCTTGAGG+TGG | - | tig0006807:76085-76104 | None:intergenic | 55.0% |
| ! | CCGCCTGAATTTTGCTGACG+AGG | - | tig0006807:76154-76173 | None:intergenic | 55.0% |
| CAGCAAAATTCAGGCGGTGC+TGG | + | tig0006807:76157-76176 | Msa1344460:CDS | 55.0% | |
| CAGATCAAGCGGTGCGATCT+TGG | + | tig0006807:76334-76353 | Msa1344460:CDS | 55.0% | |
| AACCAACAGCAACCGCCCGT+CGG | + | tig0006807:75813-75832 | Msa1344460:CDS | 60.0% | |
| TTCCATAAGTCTCCGGCGCC+GGG | - | tig0006807:76003-76022 | None:intergenic | 60.0% | |
| GGTGGATAGCCCTGTTGTGG+AGG | - | tig0006807:76067-76086 | None:intergenic | 60.0% | |
| !! | TTCAGGCGGTGCTGGTTGCA+TGG | + | tig0006807:76165-76184 | Msa1344460:CDS | 60.0% |
| !! | GTGCTGGTTGCATGGAAGGC+TGG | + | tig0006807:76173-76192 | Msa1344460:CDS | 60.0% |
| AACCAACAGCAACCGCCCGT+CGG | + | tig0006807:75813-75832 | Msa1344460:CDS | 60.0% | |
| TTCCATAAGTCTCCGGCGCC+GGG | - | tig0006807:76003-76022 | None:intergenic | 60.0% | |
| GGTGGATAGCCCTGTTGTGG+AGG | - | tig0006807:76067-76086 | None:intergenic | 60.0% | |
| !! | TTCAGGCGGTGCTGGTTGCA+TGG | + | tig0006807:76165-76184 | Msa1344460:CDS | 60.0% |
| !! | GTGCTGGTTGCATGGAAGGC+TGG | + | tig0006807:76173-76192 | Msa1344460:CDS | 60.0% |
| TTGTGGGGGGTAGGGGGTAG+TGG | - | tig0006807:75782-75801 | None:intergenic | 65.0% | |
| TTGCTGGGGAGGAACGCCGA+CGG | - | tig0006807:75832-75851 | None:intergenic | 65.0% | |
| GAGGATGGACCTTGCTGGGG+AGG | - | tig0006807:75843-75862 | None:intergenic | 65.0% | |
| ! | TACCCGGCGCCGGAGACTTA+TGG | + | tig0006807:75998-76017 | Msa1344460:CDS | 65.0% |
| GGTGGGTAGCCCTGTTGTGG+AGG | - | tig0006807:76100-76119 | None:intergenic | 65.0% | |
| TGCGGTGGGTAGCCCTGTTG+TGG | - | tig0006807:76103-76122 | None:intergenic | 65.0% | |
| ! | GGTGGTGGCTGAGCGTACTG+AGG | - | tig0006807:76133-76152 | None:intergenic | 65.0% |
| !! | GGCGGTGCTGGTTGCATGGA+AGG | + | tig0006807:76169-76188 | Msa1344460:CDS | 65.0% |
| TTGTGGGGGGTAGGGGGTAG+TGG | - | tig0006807:75782-75801 | None:intergenic | 65.0% | |
| TTGCTGGGGAGGAACGCCGA+CGG | - | tig0006807:75832-75851 | None:intergenic | 65.0% | |
| GAGGATGGACCTTGCTGGGG+AGG | - | tig0006807:75843-75862 | None:intergenic | 65.0% | |
| ! | TACCCGGCGCCGGAGACTTA+TGG | + | tig0006807:75998-76017 | Msa1344460:CDS | 65.0% |
| GGTGGGTAGCCCTGTTGTGG+AGG | - | tig0006807:76100-76119 | None:intergenic | 65.0% | |
| TGCGGTGGGTAGCCCTGTTG+TGG | - | tig0006807:76103-76122 | None:intergenic | 65.0% | |
| ! | GGTGGTGGCTGAGCGTACTG+AGG | - | tig0006807:76133-76152 | None:intergenic | 65.0% |
| !! | GGCGGTGCTGGTTGCATGGA+AGG | + | tig0006807:76169-76188 | Msa1344460:CDS | 65.0% |
| TGCTGGGGAGGAACGCCGAC+GGG | - | tig0006807:75831-75850 | None:intergenic | 70.0% | |
| GTCGGCGTTCCTCCCCAGCA+AGG | + | tig0006807:75831-75850 | Msa1344460:CDS | 70.0% | |
| TGCTGGGGAGGAACGCCGAC+GGG | - | tig0006807:75831-75850 | None:intergenic | 70.0% | |
| GTCGGCGTTCCTCCCCAGCA+AGG | + | tig0006807:75831-75850 | Msa1344460:CDS | 70.0% | |
| CGCCGACGGGCGGTTGCTGT+TGG | - | tig0006807:75818-75837 | None:intergenic | 75.0% | |
| TGGGGAGGAACGCCGACGGG+CGG | - | tig0006807:75828-75847 | None:intergenic | 75.0% | |
| CGCCGACGGGCGGTTGCTGT+TGG | - | tig0006807:75818-75837 | None:intergenic | 75.0% | |
| TGGGGAGGAACGCCGACGGG+CGG | - | tig0006807:75828-75847 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0006807 | gene | 75724 | 77859 | 75724 | ID=Msa1344460;Name=Msa1344460 |
| tig0006807 | mRNA | 75724 | 77859 | 75724 | ID=Msa1344460-mRNA-1;Parent=Msa1344460;Name=Msa1344460-mRNA-1;_AED=0.07;_eAED=0.07;_QI=77|0.33|0.75|0.75|0.33|0.25|4|219|142 |
| tig0006807 | exon | 75724 | 75852 | 75724 | ID=Msa1344460-mRNA-1:exon:4502;Parent=Msa1344460-mRNA-1 |
| tig0006807 | exon | 75996 | 76194 | 75996 | ID=Msa1344460-mRNA-1:exon:4503;Parent=Msa1344460-mRNA-1 |
| tig0006807 | exon | 76313 | 76397 | 76313 | ID=Msa1344460-mRNA-1:exon:4504;Parent=Msa1344460-mRNA-1 |
| tig0006807 | exon | 77548 | 77859 | 77548 | ID=Msa1344460-mRNA-1:exon:4505;Parent=Msa1344460-mRNA-1 |
| tig0006807 | five_prime_UTR | 75724 | 75800 | 75724 | ID=Msa1344460-mRNA-1:five_prime_utr;Parent=Msa1344460-mRNA-1 |
| tig0006807 | CDS | 75801 | 75852 | 75801 | ID=Msa1344460-mRNA-1:cds;Parent=Msa1344460-mRNA-1 |
| tig0006807 | CDS | 75996 | 76194 | 75996 | ID=Msa1344460-mRNA-1:cds;Parent=Msa1344460-mRNA-1 |
| tig0006807 | CDS | 76313 | 76397 | 76313 | ID=Msa1344460-mRNA-1:cds;Parent=Msa1344460-mRNA-1 |
| tig0006807 | CDS | 77548 | 77640 | 77548 | ID=Msa1344460-mRNA-1:cds;Parent=Msa1344460-mRNA-1 |
| tig0006807 | three_prime_UTR | 77641 | 77859 | 77641 | ID=Msa1344460-mRNA-1:three_prime_utr;Parent=Msa1344460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
