AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0176610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0176610 MtrunA17_Chr1g0199101 92.895 563 15 3 1 562 1 539 0.0 1061
Msa0176610 MtrunA17_Chr1g0163001 55.428 608 135 26 1 555 1 525 1.91e-180 519
Msa0176610 MtrunA17_Chr1g0162971 47.619 546 151 16 1 531 1 426 2.19e-133 395
Msa0176610 MtrunA17_Chr1g0210821 45.641 585 239 15 1 547 1 544 7.20e-130 391
Msa0176610 MtrunA17_Chr7g0263941 74.500 200 25 3 40 237 25 200 1.62e-106 325
Msa0176610 MtrunA17_Chr8g0342421 65.368 231 55 2 1 231 18 223 3.56e-106 328
Msa0176610 MtrunA17_Chr2g0330171 72.549 204 30 2 44 244 43 223 7.64e-105 323
Msa0176610 MtrunA17_Chr4g0029521 39.243 581 212 22 13 555 17 494 1.32e-104 323
Msa0176610 MtrunA17_Chr1g0181381 73.529 204 27 4 29 231 23 200 8.15e-104 322
Msa0176610 MtrunA17_Chr4g0040571 64.889 225 51 3 7 231 4 200 1.64e-102 318
Msa0176610 MtrunA17_Chr1g0191991 72.432 185 28 1 45 229 61 222 1.13e-98 309
Msa0176610 MtrunA17_Chr7g0268961 79.618 157 32 0 73 229 25 181 1.52e-98 308
Msa0176610 MtrunA17_Chr1g0185121 62.745 255 69 8 78 312 48 296 4.39e-98 305
Msa0176610 MtrunA17_Chr1g0151351 61.345 238 66 4 15 249 8 222 8.42e-98 304
Msa0176610 MtrunA17_Chr2g0326381 69.892 186 32 2 47 231 32 194 2.92e-93 291
Msa0176610 MtrunA17_Chr3g0141431 62.376 202 51 3 26 226 2 179 2.93e-89 281
Msa0176610 MtrunA17_Chr2g0324991 83.969 131 21 0 81 211 3 133 6.52e-81 250
Msa0176610 MtrunA17_Chr6g0479921 62.329 146 54 1 80 224 39 184 5.65e-67 224
Msa0176610 MtrunA17_Chr8g0375521 60.959 146 55 2 80 223 37 182 8.88e-65 217
Msa0176610 MtrunA17_Chr1g0200421 34.810 158 90 5 78 222 229 386 3.98e-24 105
Msa0176610 MtrunA17_Chr3g0123941 34.783 161 90 4 77 222 108 268 1.71e-22 99.0
Msa0176610 MtrunA17_Chr2g0320341 34.868 152 85 4 82 219 227 378 3.29e-22 99.0
Msa0176610 MtrunA17_Chr5g0422571 37.500 152 82 6 91 231 106 255 1.20e-21 95.5
Msa0176610 MtrunA17_Chr7g0258011 34.320 169 91 7 79 229 169 335 1.54e-20 93.2
Msa0176610 MtrunA17_Chr8g0352011 36.986 146 82 5 86 222 166 310 2.75e-20 92.4
Msa0176610 MtrunA17_Chr1g0198651 35.862 145 78 5 91 222 107 249 3.91e-20 91.3
Msa0176610 MtrunA17_Chr1g0173841 35.714 154 87 6 79 222 208 359 7.69e-20 91.7
Msa0176610 MtrunA17_Chr4g0053341 35.762 151 87 5 81 222 69 218 1.96e-19 87.8
Msa0176610 MtrunA17_Chr2g0328921 34.694 147 84 6 86 222 138 282 8.27e-19 87.4
Msa0176610 MtrunA17_Chr8g0382121 32.450 151 91 5 80 219 106 256 1.84e-18 86.7
Msa0176610 MtrunA17_Chr4g0026521 34.694 147 84 6 86 222 118 262 4.35e-18 85.1
Msa0176610 MtrunA17_Chr2g0321291 35.374 147 83 5 86 222 133 277 4.65e-18 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0176610 AT2G02080.1 49.597 496 178 18 37 521 48 482 1.60e-126 381
Msa0176610 AT2G02080.4 49.597 496 178 18 37 521 48 482 1.60e-126 381
Msa0176610 AT2G02080.5 49.597 496 178 18 37 521 48 482 1.60e-126 381
Msa0176610 AT2G02080.3 49.597 496 178 18 37 521 48 482 1.60e-126 381
Msa0176610 AT2G02080.6 50.114 439 174 16 94 521 1 405 2.89e-112 342
Msa0176610 AT2G02080.2 50.114 439 174 16 94 521 1 405 2.89e-112 342
Msa0176610 AT2G02070.2 67.200 250 49 4 10 255 11 231 1.15e-109 340
Msa0176610 AT2G02070.1 67.200 250 49 4 10 255 11 231 1.15e-109 340
Msa0176610 AT1G14580.1 73.684 209 29 3 29 235 33 217 4.14e-109 334
Msa0176610 AT1G14580.2 73.684 209 29 3 29 235 33 217 4.14e-109 334
Msa0176610 AT1G14580.3 73.684 209 29 3 29 235 47 231 9.13e-109 334
Msa0176610 AT1G55110.3 73.367 199 26 3 44 238 57 232 2.09e-102 317
Msa0176610 AT1G55110.1 73.367 199 26 3 44 238 57 232 2.09e-102 317
Msa0176610 AT1G55110.2 73.367 199 26 3 44 238 57 232 2.09e-102 317
Msa0176610 AT5G66730.1 74.468 188 25 1 47 234 32 196 3.99e-102 318
Msa0176610 AT3G50700.1 72.872 188 28 1 47 234 34 198 6.28e-102 315
Msa0176610 AT3G45260.2 61.943 247 62 3 47 284 39 262 9.34e-100 310
Msa0176610 AT3G45260.1 61.943 247 62 3 47 284 39 262 9.34e-100 310
Msa0176610 AT3G13810.6 75.401 187 22 2 46 231 50 213 1.25e-99 311
Msa0176610 AT3G13810.4 75.401 187 22 2 46 231 69 232 1.41e-99 311
Msa0176610 AT3G13810.1 75.401 187 22 2 46 231 69 232 1.41e-99 311
Msa0176610 AT3G13810.5 75.401 187 22 2 46 231 64 227 1.86e-99 311
Msa0176610 AT1G03840.1 72.432 185 28 1 47 231 41 202 7.12e-99 309
Msa0176610 AT5G03150.1 71.429 203 30 3 47 244 53 232 9.30e-99 309
Msa0176610 AT1G03840.2 84.211 152 24 0 80 231 49 200 1.48e-98 308
Msa0176610 AT3G13810.3 83.544 158 25 1 75 231 62 219 1.13e-96 303
Msa0176610 AT5G44160.2 82.051 156 28 0 76 231 4 159 1.27e-96 301
Msa0176610 AT3G13810.2 83.544 158 25 1 75 231 76 233 1.72e-96 303
Msa0176610 AT5G44160.1 72.432 185 28 1 47 231 37 198 3.10e-96 301
Msa0176610 AT4G02670.1 77.647 170 28 2 78 237 61 230 1.11e-95 298
Msa0176610 AT4G02670.2 77.647 170 28 2 78 237 63 232 1.25e-95 298
Msa0176610 AT5G60470.2 61.778 225 59 4 19 240 17 217 6.97e-95 297
Msa0176610 AT5G60470.3 61.778 225 59 4 19 240 13 213 7.27e-95 297
Msa0176610 AT5G60470.1 76.687 163 35 2 81 240 46 208 1.75e-93 293
Msa0176610 AT1G68130.1 44.922 256 99 6 42 295 36 251 3.15e-68 227
Msa0176610 AT1G25250.1 57.831 166 60 3 80 242 20 178 5.90e-68 224
Msa0176610 AT1G25250.3 57.831 166 60 3 80 242 43 201 8.90e-68 224
Msa0176610 AT2G01940.1 54.595 185 59 3 43 225 40 201 1.68e-66 223
Msa0176610 AT2G01940.3 53.763 186 60 4 43 225 40 202 5.71e-63 214
Msa0176610 AT1G68130.2 46.703 182 78 5 116 295 1 165 1.64e-45 164
Msa0176610 AT1G25250.2 42.647 204 89 6 116 315 1 180 1.88e-45 162
Msa0176610 AT2G01940.2 62.500 112 40 2 116 225 1 112 5.28e-44 160
Msa0176610 AT1G34370.3 34.078 179 103 5 78 241 12 190 3.55e-23 100
Msa0176610 AT1G34370.2 34.078 179 103 5 78 241 222 400 7.62e-23 102
Msa0176610 AT1G34370.1 34.078 179 103 5 78 241 222 400 7.62e-23 102
Msa0176610 AT5G22890.1 31.373 153 91 3 84 222 202 354 3.11e-21 96.3
Msa0176610 AT1G13290.1 35.948 153 84 6 91 231 93 243 6.18e-20 91.3
Msa0176610 AT3G57670.1 35.032 157 90 6 76 222 194 348 1.38e-19 91.3
Msa0176610 AT1G51220.1 31.361 169 102 5 86 245 165 328 1.91e-19 90.1
Msa0176610 AT3G20880.1 34.247 146 86 5 86 222 243 387 2.43e-19 90.9
Msa0176610 AT1G34790.1 36.364 154 86 6 79 222 125 276 1.02e-18 87.4
Msa0176610 AT1G08290.1 37.500 136 72 6 98 222 179 312 1.29e-17 84.7

Find 107 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGATAAATTTATTAATTTA+AGG 0.118224 1_4:+63126745 Msa0176610:three_prime_UTR
CCAACTTGATGATCACTTAA+AGG 0.176750 1_4:-63126209 None:intergenic
CTAAAAGAAGTGTAGTTTAT+TGG 0.180835 1_4:+63126853 Msa0176610:three_prime_UTR
ATTGCTTTCATTGCCAAATA+TGG 0.188179 1_4:-63126513 None:intergenic
TTTGCAATTGATGGGATATT+TGG 0.199708 1_4:-63125809 None:intergenic
GCACATTCAACTCAACATTT+TGG 0.223217 1_4:+63126692 Msa0176610:CDS
AGCTACTTGCTTGGTGTTCC+AGG 0.228645 1_4:-63123166 None:intergenic
GGACGTGTTAAAATAAAATA+AGG 0.252394 1_4:-63126912 None:intergenic
AACAACATCAATGTCACTTT+TGG 0.258147 1_4:+63126401 Msa0176610:CDS
AATGATGAAGAGTGATTTAA+AGG 0.258726 1_4:-63125930 None:intergenic
GGAAACACATCATCCATATT+TGG 0.261465 1_4:+63126500 Msa0176610:CDS
GATTGCAAAATATATAATTA+TGG 0.270959 1_4:+63122991 Msa0176610:intron
TGCTAGTGGATGATGTAATT+TGG 0.279783 1_4:-63125842 None:intergenic
TCTTCATCTACATCATTCTT+TGG 0.280651 1_4:+63123022 Msa0176610:CDS
TGGAAATAGAAGTTCAAGTA+TGG 0.282481 1_4:+63126421 Msa0176610:CDS
CTTTCTCCTTGGCTCTTTGT+TGG 0.310223 1_4:-63123850 None:intergenic
ATTGTAGTAATTTCTAGAAT+TGG 0.317396 1_4:-63126888 None:intergenic
TTAAATCACTCTTCATCATT+TGG 0.318218 1_4:+63125933 Msa0176610:CDS
TTAAGACACCCTAACCCTTT+TGG 0.323474 1_4:+63125741 Msa0176610:CDS
CACGACCCTTCAAGAGCTTT+AGG 0.336517 1_4:+63123906 Msa0176610:CDS
AGCAATCTTAATATGAGATT+TGG 0.345761 1_4:+63126530 Msa0176610:CDS
AATATGTTGCAATGAAGGTT+AGG 0.360874 1_4:+63126722 Msa0176610:exon
TTGCAAGAGGAAAGGATCTA+AGG 0.371590 1_4:-63122712 None:intergenic
GATGACAACAACGATCTTCA+TGG 0.372227 1_4:+63126455 Msa0176610:CDS
AACCATAAGGTTGAAAAGAT+TGG 0.377417 1_4:-63126123 None:intergenic
TTTGTTGCCATTAGAGTCTT+GGG 0.377742 1_4:-63123726 None:intergenic
ATACCTAGCTATTTATCTTC+TGG 0.377801 1_4:-63122653 None:intergenic
CAACTTGATGATCACTTAAA+GGG 0.378987 1_4:-63126208 None:intergenic
GTAGTAGTTGATTGAGGATG+AGG 0.387074 1_4:-63123085 None:intergenic
ACAAACCATCACATTAGTTT+AGG 0.387648 1_4:+63125786 Msa0176610:CDS
ATGATCATAAATCAGCTGAT+AGG 0.388164 1_4:+63126357 Msa0176610:CDS
ATTACTACCTTTGTTATTGT+TGG 0.391654 1_4:-63126333 None:intergenic
TGAGTACTCCCAAAAGGGTT+AGG 0.396876 1_4:-63125750 None:intergenic
CTCACAGATTGAGAGCAAAA+AGG 0.402598 1_4:-63122735 None:intergenic
ATTTGTTGCCATTAGAGTCT+TGG 0.406931 1_4:-63123727 None:intergenic
TTTGTATTGCCTTGAAGATC+AGG 0.407490 1_4:-63126080 None:intergenic
AGTGCTATCACTTCTGCATC+TGG 0.408067 1_4:-63123699 None:intergenic
TTGATAAACTCTATTGCAAA+TGG 0.417216 1_4:+63126479 Msa0176610:CDS
GTGACAGTTTCATCACTCAT+AGG 0.424200 1_4:+63125685 Msa0176610:CDS
AATATGCTGTTCAATCTGAT+TGG 0.427517 1_4:+63124006 Msa0176610:CDS
ATGCATCTTCCTGATCTTCA+AGG 0.433107 1_4:+63126071 Msa0176610:CDS
GCTCAAATATGTTGCAATGA+AGG 0.444416 1_4:+63126717 Msa0176610:CDS
TTGAGATTGTTGTTCTTCAA+AGG 0.461712 1_4:-63126012 None:intergenic
CACAAATAAACCTTTCTCCT+TGG 0.464750 1_4:-63123861 None:intergenic
TTGTTCCTTGGTTACTACTC+AGG 0.465952 1_4:-63126163 None:intergenic
TATGTGAGGTTTGCAACAAA+GGG 0.467995 1_4:+63123757 Msa0176610:CDS
ACTATCTCCCAAGACTCTAA+TGG 0.473692 1_4:+63123719 Msa0176610:CDS
TGATGGACGCATGTGGGCTC+AGG 0.479979 1_4:-63123885 None:intergenic
TGTAGTTTATTGGTAAAATG+AGG 0.480030 1_4:+63126863 Msa0176610:three_prime_UTR
AAATAATTAAGCTACTTGCT+TGG 0.481982 1_4:-63123175 None:intergenic
GAAGAGGACACAATCTTCCT+TGG 0.488329 1_4:+63123811 Msa0176610:CDS
AATTGATGAGTACTCCCAAA+AGG 0.490054 1_4:-63125756 None:intergenic
CCTTTAAGTGATCATCAAGT+TGG 0.496965 1_4:+63126209 Msa0176610:CDS
CAACAAAGAGCCAAGGAGAA+AGG 0.497525 1_4:+63123851 Msa0176610:CDS
TAAACTAATGTGATGGTTTG+TGG 0.499948 1_4:-63125784 None:intergenic
TGATCATAAATCAGCTGATA+GGG 0.500020 1_4:+63126358 Msa0176610:CDS
ATTAAGTGTTGTTCAAACTT+TGG 0.503007 1_4:-63125897 None:intergenic
TGAATTGATCATGAACCATA+AGG 0.503794 1_4:-63126136 None:intergenic
ATATGTTGCAATGAAGGTTA+GGG 0.507680 1_4:+63126723 Msa0176610:exon
AATCTTAATATGAGATTTGG+TGG 0.509729 1_4:+63126533 Msa0176610:CDS
CAAAATGTTGTTATTGCTAG+TGG 0.510794 1_4:-63125856 None:intergenic
GAGTACTCCCAAAAGGGTTA+GGG 0.513767 1_4:-63125749 None:intergenic
TTGAAGAATGGTGATGAAGA+TGG 0.514253 1_4:-63125966 None:intergenic
CAAGAGCAAGAGCAAGGAAA+GGG 0.515248 1_4:-63126933 None:intergenic
ATATGTGAGGTTTGCAACAA+AGG 0.517578 1_4:+63123756 Msa0176610:CDS
GACGTGTTAAAATAAAATAA+GGG 0.519515 1_4:-63126911 None:intergenic
CAGTTCCTCAAAAGAAAAGA+AGG 0.521220 1_4:+63123137 Msa0176610:CDS
TAATGTAAAGTGTTGTTCCT+TGG 0.521540 1_4:-63126175 None:intergenic
TTTGCAACAAAGGGTTTCAA+AGG 0.521693 1_4:+63123766 Msa0176610:CDS
TTGCAACAAAGGGTTTCAAA+GGG 0.525797 1_4:+63123767 Msa0176610:CDS
ATTGATGAGTACTCCCAAAA+GGG 0.530292 1_4:-63125755 None:intergenic
GCAGAAGTAGTAGTTGATTG+AGG 0.531988 1_4:-63123091 None:intergenic
ATTGTGGCACCCTCTTCTCT+AGG 0.536248 1_4:+63124072 Msa0176610:CDS
ATATCACTCATATTGAAGAA+TGG 0.537313 1_4:-63125978 None:intergenic
AGATCTCCTAAAGCTCTTGA+AGG 0.547138 1_4:-63123912 None:intergenic
ACTTTGGTGGTGTTGATCCA+AGG 0.547369 1_4:-63125881 None:intergenic
GTAAGCATGGTGAGAAGAAG+TGG 0.548240 1_4:+63123961 Msa0176610:CDS
AAAAGTCCAACAAAGAGCCA+AGG 0.555795 1_4:+63123844 Msa0176610:CDS
AATCTTCAACTTCATAGAAG+AGG 0.557392 1_4:+63123795 Msa0176610:CDS
AACAAATAGATTTATATGTG+AGG 0.560724 1_4:+63123743 Msa0176610:CDS
TTTGGCCTAAACTAATGTGA+TGG 0.560847 1_4:-63125791 None:intergenic
TAGCCAGAAGATAAATAGCT+AGG 0.563569 1_4:+63122650 None:intergenic
AAGCATTACTCTCGTAAGCA+TGG 0.570554 1_4:+63123948 Msa0176610:CDS
ATGTTTGTTACCTAGAGAAG+AGG 0.572256 1_4:-63124082 None:intergenic
AAGCTCTTGAAGGGTCGTGA+TGG 0.580721 1_4:-63123902 None:intergenic
TTCTTAAACAAACAACTACA+TGG 0.582618 1_4:+63126044 Msa0176610:CDS
TGACAGTTTCATCACTCATA+GGG 0.582640 1_4:+63125686 Msa0176610:CDS
TGTTTGTTACCTAGAGAAGA+GGG 0.585590 1_4:-63124081 None:intergenic
AGAGAATATAGATGTGATTG+TGG 0.589973 1_4:+63124056 Msa0176610:CDS
AGAGCTTTAGGAGATCTCAC+TGG 0.591272 1_4:+63123918 Msa0176610:CDS
AAGTGTTGTTCAAACTTTGG+TGG 0.596159 1_4:-63125894 None:intergenic
AAGAAAAGAAGGAATCAACC+TGG 0.619630 1_4:+63123148 Msa0176610:CDS
ATGGTCAGAAACATGAGTGG+TGG 0.622609 1_4:+63126596 Msa0176610:CDS
AAAGCACATTCTAAGACTTG+TGG 0.628477 1_4:+63124029 Msa0176610:CDS
AGGGTCGTGATGGACGCATG+TGG 0.629562 1_4:-63123892 None:intergenic
GATCTCCTAAAGCTCTTGAA+GGG 0.629745 1_4:-63123911 None:intergenic
TGCAAAATATATAATTATGG+CGG 0.632865 1_4:+63122994 Msa0176610:exon
GGGTCGTGATGGACGCATGT+GGG 0.641981 1_4:-63123891 None:intergenic
TGACATGATGAATACTAGCA+TGG 0.643758 1_4:+63126643 Msa0176610:CDS
AATTCTACCAACAATAACAA+AGG 0.649478 1_4:+63126326 Msa0176610:CDS
TTTGTCAATTCAATGCAACA+TGG 0.650949 1_4:+63126233 Msa0176610:CDS
GATGAAGAGTGATTTAAAGG+TGG 0.652236 1_4:-63125927 None:intergenic
AACAACCTGAGTAGTAACCA+AGG 0.667707 1_4:+63126158 Msa0176610:CDS
AATGCAGTGGCAGACATGTG+AGG 0.674772 1_4:-63126272 None:intergenic
ACAAGAGTAATGAAGAGACG+AGG 0.717918 1_4:-63122687 None:intergenic
GAAGAACAACAATCTCAACA+AGG 0.728667 1_4:+63126017 Msa0176610:CDS
GGAATGGTCAGAAACATGAG+TGG 0.767875 1_4:+63126593 Msa0176610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATATTTGATTTTTTTG+TGG - chr1_4:63122799-63122818 None:intergenic 10.0%
!!! TATATAATATTTTGTTGTTT+TGG + chr1_4:63123655-63123674 Msa0176610:intron 10.0%
!! ATTAAAATGAAAAAAAAAGA+AGG - chr1_4:63125374-63125393 None:intergenic 10.0%
!! GAGATAAATTTATTAATTTA+AGG + chr1_4:63126745-63126764 Msa0176610:three_prime_UTR 10.0%
!! GATTGCAAAATATATAATTA+TGG + chr1_4:63122991-63123010 Msa0176610:intron 15.0%
!! AAAAACAAATTTATTGAGAA+GGG - chr1_4:63123239-63123258 None:intergenic 15.0%
!!! GATTTTGATAATAAAATTGA+AGG - chr1_4:63123385-63123404 None:intergenic 15.0%
!! CGAATTCTTATAATAAAAAT+TGG - chr1_4:63124285-63124304 None:intergenic 15.0%
!!! TTAAAACTATAATTTTTGGT+TGG - chr1_4:63124412-63124431 None:intergenic 15.0%
!!! ACTGTTAAAACTATAATTTT+TGG - chr1_4:63124416-63124435 None:intergenic 15.0%
!!! TACCTTTTTCATATAATAAA+AGG + chr1_4:63124574-63124593 Msa0176610:intron 15.0%
!! ATATTCATTACACAAAAATA+TGG + chr1_4:63125462-63125481 Msa0176610:intron 15.0%
!! TATTCATTACACAAAAATAT+GGG + chr1_4:63125463-63125482 Msa0176610:intron 15.0%
!!! AAACTCATTTTTAGTAAAAA+TGG + chr1_4:63125576-63125595 Msa0176610:intron 15.0%
!!! ATCATTGACAATTTTTTTTT+GGG - chr1_4:63125623-63125642 None:intergenic 15.0%
!!! TATCATTGACAATTTTTTTT+TGG - chr1_4:63125624-63125643 None:intergenic 15.0%
!!! TAATTCTTTGTGATTAATTT+TGG + chr1_4:63125655-63125674 Msa0176610:intron 15.0%
!! TGCAAAATATATAATTATGG+CGG + chr1_4:63122994-63123013 Msa0176610:exon 20.0%
!! CAAAAACAAATTTATTGAGA+AGG - chr1_4:63123240-63123259 None:intergenic 20.0%
!! TAATTCATGTTCATGATTTA+GGG - chr1_4:63123300-63123319 None:intergenic 20.0%
!! TAAATCATGAACATGAATTA+GGG + chr1_4:63123300-63123319 Msa0176610:intron 20.0%
!! AACAAATAGATTTATATGTG+AGG + chr1_4:63123743-63123762 Msa0176610:CDS 20.0%
!! TAGCATATATTATATATACG+TGG - chr1_4:63124174-63124193 None:intergenic 20.0%
!! AAAAAAGACAACGATATATA+AGG - chr1_4:63124457-63124476 None:intergenic 20.0%
!!! CACCTTTTATTATATGAAAA+AGG - chr1_4:63124579-63124598 None:intergenic 20.0%
!! GTAATTAAATTGAAGGAATA+GGG - chr1_4:63124994-63125013 None:intergenic 20.0%
!! AGAAAATTCTCTTCATTAAT+TGG + chr1_4:63125018-63125037 Msa0176610:intron 20.0%
!! ATACTCAAAAACTTCAATAT+GGG - chr1_4:63125160-63125179 None:intergenic 20.0%
!! AATACTCAAAAACTTCAATA+TGG - chr1_4:63125161-63125180 None:intergenic 20.0%
!!! AAGTTTGATTTAGAAATTCT+TGG + chr1_4:63125243-63125262 Msa0176610:intron 20.0%
!!! TCATTTTAATTTGTTACAAG+TGG + chr1_4:63125384-63125403 Msa0176610:intron 20.0%
!! ATTATAATATGAACTTCCAA+AGG + chr1_4:63125486-63125505 Msa0176610:intron 20.0%
!!! TCATTTTTAGTAAAAATGGT+AGG + chr1_4:63125580-63125599 Msa0176610:intron 20.0%
!!! CATTTTTAGTAAAAATGGTA+GGG + chr1_4:63125581-63125600 Msa0176610:intron 20.0%
!!! ATTTTTAGTAAAAATGGTAG+GGG + chr1_4:63125582-63125601 Msa0176610:intron 20.0%
!!! AAGTTAACTTTAGATTTTCT+TGG + chr1_4:63126563-63126582 Msa0176610:CDS 20.0%
!!! ATTGTAGTAATTTCTAGAAT+TGG - chr1_4:63126891-63126910 None:intergenic 20.0%
!! GACGTGTTAAAATAAAATAA+GGG - chr1_4:63126914-63126933 None:intergenic 20.0%
! ATTAAAAGAAGCTAGAAAGA+AGG - chr1_4:63122827-63122846 None:intergenic 25.0%
!! TTGTTATCTTTTCATGAGAA+AGG + chr1_4:63122892-63122911 Msa0176610:intron 25.0%
! AAATAATTAAGCTACTTGCT+TGG - chr1_4:63123178-63123197 None:intergenic 25.0%
! CTAATTCATGTTCATGATTT+AGG - chr1_4:63123301-63123320 None:intergenic 25.0%
! CTAAATCATGAACATGAATT+AGG + chr1_4:63123299-63123318 Msa0176610:intron 25.0%
! AGCTATATAAGAACTATGAT+TGG + chr1_4:63123345-63123364 Msa0176610:intron 25.0%
!! ATATAAGTAACCCTAACTTT+TGG - chr1_4:63124203-63124222 None:intergenic 25.0%
! AAAAGTTAGGGTTACTTATA+TGG + chr1_4:63124202-63124221 Msa0176610:intron 25.0%
!!! ATAACAATCTGAAGTTTTGT+CGG + chr1_4:63124372-63124391 Msa0176610:intron 25.0%
! CTCTTTAAACTTCTTTACTA+AGG + chr1_4:63124549-63124568 Msa0176610:intron 25.0%
!!! TGTTCAAATTTTTGGTTCTA+GGG + chr1_4:63124806-63124825 Msa0176610:intron 25.0%
! CGTGAATGTTAATAGATTAT+GGG - chr1_4:63124839-63124858 None:intergenic 25.0%
! ACGTGAATGTTAATAGATTA+TGG - chr1_4:63124840-63124859 None:intergenic 25.0%
! AACTTTGTTCTCATATGAAT+TGG + chr1_4:63124878-63124897 Msa0176610:intron 25.0%
! GGTAATTAAATTGAAGGAAT+AGG - chr1_4:63124995-63125014 None:intergenic 25.0%
!!! TCTGTTGGTAATTAAATTGA+AGG - chr1_4:63125001-63125020 None:intergenic 25.0%
!! TAATGAAGAGAATTTTCTGT+TGG - chr1_4:63125016-63125035 None:intergenic 25.0%
! ATATATAGTCATGTTTGTCA+TGG + chr1_4:63125050-63125069 Msa0176610:intron 25.0%
!! TAGAATATAGACAAGTATTG+AGG + chr1_4:63125111-63125130 Msa0176610:intron 25.0%
! TACTCAAAAACTTCAATATG+GGG - chr1_4:63125159-63125178 None:intergenic 25.0%
! TAAATCAAACTTCCAATTTG+AGG - chr1_4:63125235-63125254 None:intergenic 25.0%
!!! TCTTGGTTTGTTTCATATTT+TGG + chr1_4:63125260-63125279 Msa0176610:intron 25.0%
! TAAACTACAATAGAAGTAGA+GGG - chr1_4:63125300-63125319 None:intergenic 25.0%
!! AGAAGGTTAATTGATTTAAG+TGG - chr1_4:63125357-63125376 None:intergenic 25.0%
!!! TTGACAATTTTTTTTTGGGT+GGG - chr1_4:63125619-63125638 None:intergenic 25.0%
!!! ATTGACAATTTTTTTTTGGG+TGG - chr1_4:63125620-63125639 None:intergenic 25.0%
!! ATTAAGTGTTGTTCAAACTT+TGG - chr1_4:63125900-63125919 None:intergenic 25.0%
! AATGATGAAGAGTGATTTAA+AGG - chr1_4:63125933-63125952 None:intergenic 25.0%
! TTAAATCACTCTTCATCATT+TGG + chr1_4:63125933-63125952 Msa0176610:CDS 25.0%
! ATATCACTCATATTGAAGAA+TGG - chr1_4:63125981-63126000 None:intergenic 25.0%
! TTCTTAAACAAACAACTACA+TGG + chr1_4:63126044-63126063 Msa0176610:CDS 25.0%
! AATTCTACCAACAATAACAA+AGG + chr1_4:63126326-63126345 Msa0176610:CDS 25.0%
!!! ATTACTACCTTTGTTATTGT+TGG - chr1_4:63126336-63126355 None:intergenic 25.0%
! TTGATAAACTCTATTGCAAA+TGG + chr1_4:63126479-63126498 Msa0176610:CDS 25.0%
! AGCAATCTTAATATGAGATT+TGG + chr1_4:63126530-63126549 Msa0176610:CDS 25.0%
! AATCTTAATATGAGATTTGG+TGG + chr1_4:63126533-63126552 Msa0176610:CDS 25.0%
!! CAATAAACTACACTTCTTTT+AGG - chr1_4:63126855-63126874 None:intergenic 25.0%
!! CTAAAAGAAGTGTAGTTTAT+TGG + chr1_4:63126853-63126872 Msa0176610:three_prime_UTR 25.0%
! TGTAGTTTATTGGTAAAATG+AGG + chr1_4:63126863-63126882 Msa0176610:three_prime_UTR 25.0%
! GGACGTGTTAAAATAAAATA+AGG - chr1_4:63126915-63126934 None:intergenic 25.0%
ATACCTAGCTATTTATCTTC+TGG - chr1_4:63122656-63122675 None:intergenic 30.0%
TCTTCATCTACATCATTCTT+TGG + chr1_4:63123022-63123041 Msa0176610:CDS 30.0%
! TGATTCCTTCTTTTCTTTTG+AGG - chr1_4:63123145-63123164 None:intergenic 30.0%
!! TTTTAAAAGCCACAAACTCA+TGG - chr1_4:63123479-63123498 None:intergenic 30.0%
AATCTTCAACTTCATAGAAG+AGG + chr1_4:63123795-63123814 Msa0176610:CDS 30.0%
AATATGCTGTTCAATCTGAT+TGG + chr1_4:63124006-63124025 Msa0176610:CDS 30.0%
AGAGAATATAGATGTGATTG+TGG + chr1_4:63124056-63124075 Msa0176610:CDS 30.0%
TTAGGGTTACTTATATGGTT+TGG + chr1_4:63124207-63124226 Msa0176610:intron 30.0%
! TGACCATTTTCTTTGCAAAT+CGG - chr1_4:63124353-63124372 None:intergenic 30.0%
AATTAGAGCTGAAAATGAAG+AGG - chr1_4:63124481-63124500 None:intergenic 30.0%
!!! GCTCTTGTTCACTTTTTTTT+GGG - chr1_4:63124699-63124718 None:intergenic 30.0%
!!! AGCTCTTGTTCACTTTTTTT+TGG - chr1_4:63124700-63124719 None:intergenic 30.0%
AACACAAACTAACAGAGAAA+GGG - chr1_4:63124727-63124746 None:intergenic 30.0%
AAACACAAACTAACAGAGAA+AGG - chr1_4:63124728-63124747 None:intergenic 30.0%
!! TTTCTCTGTTAGTTTGTGTT+TGG + chr1_4:63124727-63124746 Msa0176610:intron 30.0%
!! TTCTCTGTTAGTTTGTGTTT+GGG + chr1_4:63124728-63124747 Msa0176610:intron 30.0%
! TAGTGAAGGTGTATATTGTA+TGG + chr1_4:63124754-63124773 Msa0176610:intron 30.0%
!!! CTGTTCAAATTTTTGGTTCT+AGG + chr1_4:63124805-63124824 Msa0176610:intron 30.0%
TGTTCTCATATGAATTGGAA+TGG + chr1_4:63124883-63124902 Msa0176610:intron 30.0%
TGTGATATAACGAATTCTCT+TGG + chr1_4:63125088-63125107 Msa0176610:intron 30.0%
ATCAAAGAAAGACCTCAAAT+TGG + chr1_4:63125220-63125239 Msa0176610:intron 30.0%
!!! ATATTTTGGCATAATCCCAT+GGG + chr1_4:63125274-63125293 Msa0176610:intron 30.0%
GTAAACTACAATAGAAGTAG+AGG - chr1_4:63125301-63125320 None:intergenic 30.0%
ATTAAACCCACCAAATACAA+AGG - chr1_4:63125413-63125432 None:intergenic 30.0%
AAAAGAGTTATGTTCACCTT+TGG - chr1_4:63125505-63125524 None:intergenic 30.0%
!!! AGGTGAACATAACTCTTTTT+TGG + chr1_4:63125506-63125525 Msa0176610:intron 30.0%
!! TTTGTGATTAATTTTGGTGC+AGG + chr1_4:63125661-63125680 Msa0176610:intron 30.0%
TAAACTAATGTGATGGTTTG+TGG - chr1_4:63125787-63125806 None:intergenic 30.0%
! ACAAACCATCACATTAGTTT+AGG + chr1_4:63125786-63125805 Msa0176610:CDS 30.0%
TTTGCAATTGATGGGATATT+TGG - chr1_4:63125812-63125831 None:intergenic 30.0%
! CTGATGATTTTGCAATTGAT+GGG - chr1_4:63125820-63125839 None:intergenic 30.0%
! TCTGATGATTTTGCAATTGA+TGG - chr1_4:63125821-63125840 None:intergenic 30.0%
! CAAAATGTTGTTATTGCTAG+TGG - chr1_4:63125859-63125878 None:intergenic 30.0%
! TTGAGATTGTTGTTCTTCAA+AGG - chr1_4:63126015-63126034 None:intergenic 30.0%
! TTCCAATCTTTTCAACCTTA+TGG + chr1_4:63126121-63126140 Msa0176610:CDS 30.0%
AACCATAAGGTTGAAAAGAT+TGG - chr1_4:63126126-63126145 None:intergenic 30.0%
TGAATTGATCATGAACCATA+AGG - chr1_4:63126139-63126158 None:intergenic 30.0%
!! TAATGTAAAGTGTTGTTCCT+TGG - chr1_4:63126178-63126197 None:intergenic 30.0%
! CAACTTGATGATCACTTAAA+GGG - chr1_4:63126211-63126230 None:intergenic 30.0%
TTTGTCAATTCAATGCAACA+TGG + chr1_4:63126233-63126252 Msa0176610:CDS 30.0%
ATGATCATAAATCAGCTGAT+AGG + chr1_4:63126357-63126376 Msa0176610:CDS 30.0%
TGATCATAAATCAGCTGATA+GGG + chr1_4:63126358-63126377 Msa0176610:CDS 30.0%
!!! AACAACATCAATGTCACTTT+TGG + chr1_4:63126401-63126420 Msa0176610:CDS 30.0%
TGGAAATAGAAGTTCAAGTA+TGG + chr1_4:63126421-63126440 Msa0176610:CDS 30.0%
ATTGCTTTCATTGCCAAATA+TGG - chr1_4:63126516-63126535 None:intergenic 30.0%
!! ACTTTAGATTTTCTTGGTGT+TGG + chr1_4:63126569-63126588 Msa0176610:CDS 30.0%
AATATGTTGCAATGAAGGTT+AGG + chr1_4:63126722-63126741 Msa0176610:exon 30.0%
ATATGTTGCAATGAAGGTTA+GGG + chr1_4:63126723-63126742 Msa0176610:exon 30.0%
!! TCTTTTCTTTTGAGGAACTG+TGG - chr1_4:63123137-63123156 None:intergenic 35.0%
CAGTTCCTCAAAAGAAAAGA+AGG + chr1_4:63123137-63123156 Msa0176610:CDS 35.0%
AAGAAAAGAAGGAATCAACC+TGG + chr1_4:63123148-63123167 Msa0176610:CDS 35.0%
CTACTATTACCATGAGTTTG+TGG + chr1_4:63123467-63123486 Msa0176610:intron 35.0%
TTTGTTGCCATTAGAGTCTT+GGG - chr1_4:63123729-63123748 None:intergenic 35.0%
! ATTTGTTGCCATTAGAGTCT+TGG - chr1_4:63123730-63123749 None:intergenic 35.0%
ATATGTGAGGTTTGCAACAA+AGG + chr1_4:63123756-63123775 Msa0176610:CDS 35.0%
TATGTGAGGTTTGCAACAAA+GGG + chr1_4:63123757-63123776 Msa0176610:CDS 35.0%
TTTGCAACAAAGGGTTTCAA+AGG + chr1_4:63123766-63123785 Msa0176610:CDS 35.0%
TTGCAACAAAGGGTTTCAAA+GGG + chr1_4:63123767-63123786 Msa0176610:CDS 35.0%
CACAAATAAACCTTTCTCCT+TGG - chr1_4:63123864-63123883 None:intergenic 35.0%
!! AAAGCACATTCTAAGACTTG+TGG + chr1_4:63124029-63124048 Msa0176610:CDS 35.0%
! TGTTTGTTACCTAGAGAAGA+GGG - chr1_4:63124084-63124103 None:intergenic 35.0%
! ATGTTTGTTACCTAGAGAAG+AGG - chr1_4:63124085-63124104 None:intergenic 35.0%
!!! TGCTACTTTTGCCAAAAGTT+AGG + chr1_4:63124189-63124208 Msa0176610:intron 35.0%
!!! GCTACTTTTGCCAAAAGTTA+GGG + chr1_4:63124190-63124209 Msa0176610:intron 35.0%
! CATCCGATTTGCAAAGAAAA+TGG + chr1_4:63124347-63124366 Msa0176610:intron 35.0%
! GAGTGCACTGTTCAAATTTT+TGG + chr1_4:63124798-63124817 Msa0176610:intron 35.0%
! TTCCATGTTCTTTTCAGCAA+TGG + chr1_4:63124967-63124986 Msa0176610:intron 35.0%
! TCCATGTTCTTTTCAGCAAT+GGG + chr1_4:63124968-63124987 Msa0176610:intron 35.0%
GTTGCTTGCATTTATTGAGT+AGG + chr1_4:63125133-63125152 Msa0176610:intron 35.0%
!!! CATATTTTGGCATAATCCCA+TGG + chr1_4:63125273-63125292 Msa0176610:intron 35.0%
TGACAGTTTCATCACTCATA+GGG + chr1_4:63125686-63125705 Msa0176610:CDS 35.0%
ATTGATGAGTACTCCCAAAA+GGG - chr1_4:63125758-63125777 None:intergenic 35.0%
AATTGATGAGTACTCCCAAA+AGG - chr1_4:63125759-63125778 None:intergenic 35.0%
TTTGGCCTAAACTAATGTGA+TGG - chr1_4:63125794-63125813 None:intergenic 35.0%
! TGCTAGTGGATGATGTAATT+TGG - chr1_4:63125845-63125864 None:intergenic 35.0%
! AATAACAACATTTTGCGCCT+TGG + chr1_4:63125864-63125883 Msa0176610:CDS 35.0%
! AAGTGTTGTTCAAACTTTGG+TGG - chr1_4:63125897-63125916 None:intergenic 35.0%
GATGAAGAGTGATTTAAAGG+TGG - chr1_4:63125930-63125949 None:intergenic 35.0%
! TTGAAGAATGGTGATGAAGA+TGG - chr1_4:63125969-63125988 None:intergenic 35.0%
GAAGAACAACAATCTCAACA+AGG + chr1_4:63126017-63126036 Msa0176610:CDS 35.0%
TTTGTATTGCCTTGAAGATC+AGG - chr1_4:63126083-63126102 None:intergenic 35.0%
! CCAACTTGATGATCACTTAA+AGG - chr1_4:63126212-63126231 None:intergenic 35.0%
CCTTTAAGTGATCATCAAGT+TGG + chr1_4:63126209-63126228 Msa0176610:CDS 35.0%
CTTCAAAAAGCTTCTCAGAT+TGG + chr1_4:63126296-63126315 Msa0176610:CDS 35.0%
GGAAACACATCATCCATATT+TGG + chr1_4:63126500-63126519 Msa0176610:CDS 35.0%
!!! TTAGATTTTCTTGGTGTTGG+AGG + chr1_4:63126572-63126591 Msa0176610:CDS 35.0%
TGACATGATGAATACTAGCA+TGG + chr1_4:63126643-63126662 Msa0176610:CDS 35.0%
!!! GAGTTGAATGTGCTGATTTT+AGG - chr1_4:63126685-63126704 None:intergenic 35.0%
! GCACATTCAACTCAACATTT+TGG + chr1_4:63126692-63126711 Msa0176610:CDS 35.0%
GCTCAAATATGTTGCAATGA+AGG + chr1_4:63126717-63126736 Msa0176610:CDS 35.0%
ACAAGAGTAATGAAGAGACG+AGG - chr1_4:63122690-63122709 None:intergenic 40.0%
TTGCAAGAGGAAAGGATCTA+AGG - chr1_4:63122715-63122734 None:intergenic 40.0%
CAAAAAGGTTGCAAGAGGAA+AGG - chr1_4:63122723-63122742 None:intergenic 40.0%
CTCACAGATTGAGAGCAAAA+AGG - chr1_4:63122738-63122757 None:intergenic 40.0%
GTAGTAGTTGATTGAGGATG+AGG - chr1_4:63123088-63123107 None:intergenic 40.0%
GCAGAAGTAGTAGTTGATTG+AGG - chr1_4:63123094-63123113 None:intergenic 40.0%
!! TTTTGAGGAACTGTGGTTGA+AGG - chr1_4:63123130-63123149 None:intergenic 40.0%
ACTATCTCCCAAGACTCTAA+TGG + chr1_4:63123719-63123738 Msa0176610:CDS 40.0%
!! GACTTTTGCTTTAGCTTCCA+AGG - chr1_4:63123831-63123850 None:intergenic 40.0%
AAAAGTCCAACAAAGAGCCA+AGG + chr1_4:63123844-63123863 Msa0176610:CDS 40.0%
GATCTCCTAAAGCTCTTGAA+GGG - chr1_4:63123914-63123933 None:intergenic 40.0%
AGATCTCCTAAAGCTCTTGA+AGG - chr1_4:63123915-63123934 None:intergenic 40.0%
AAGCATTACTCTCGTAAGCA+TGG + chr1_4:63123948-63123967 Msa0176610:CDS 40.0%
TTGTGTTTGGGTGTTAGTGA+AGG + chr1_4:63124740-63124759 Msa0176610:intron 40.0%
ATGAATTGGAATGGAGATGC+TGG + chr1_4:63124892-63124911 Msa0176610:intron 40.0%
TGAATTGGAATGGAGATGCT+GGG + chr1_4:63124893-63124912 Msa0176610:intron 40.0%
CAAGTGGCTACCTTTGTATT+TGG + chr1_4:63125400-63125419 Msa0176610:intron 40.0%
TGGCTACCTTTGTATTTGGT+GGG + chr1_4:63125404-63125423 Msa0176610:intron 40.0%
GTGACAGTTTCATCACTCAT+AGG + chr1_4:63125685-63125704 Msa0176610:CDS 40.0%
! TTAAGACACCCTAACCCTTT+TGG + chr1_4:63125741-63125760 Msa0176610:CDS 40.0%
! TAAGACACCCTAACCCTTTT+GGG + chr1_4:63125742-63125761 Msa0176610:CDS 40.0%
ATGCATCTTCCTGATCTTCA+AGG + chr1_4:63126071-63126090 Msa0176610:CDS 40.0%
AACAACCTGAGTAGTAACCA+AGG + chr1_4:63126158-63126177 Msa0176610:CDS 40.0%
TTGTTCCTTGGTTACTACTC+AGG - chr1_4:63126166-63126185 None:intergenic 40.0%
!!! AGCTTTTTGAAGCAATGCAG+TGG - chr1_4:63126288-63126307 None:intergenic 40.0%
GATGACAACAACGATCTTCA+TGG + chr1_4:63126455-63126474 Msa0176610:CDS 40.0%
!!! TTTTCTTGGTGTTGGAGGAA+TGG + chr1_4:63126577-63126596 Msa0176610:CDS 40.0%
GAGAGCAAAAAGGTTGCAAG+AGG - chr1_4:63122728-63122747 None:intergenic 45.0%
AGTGCTATCACTTCTGCATC+TGG - chr1_4:63123702-63123721 None:intergenic 45.0%
GAAGAGGACACAATCTTCCT+TGG + chr1_4:63123811-63123830 Msa0176610:CDS 45.0%
! CTTTCTCCTTGGCTCTTTGT+TGG - chr1_4:63123853-63123872 None:intergenic 45.0%
CAACAAAGAGCCAAGGAGAA+AGG + chr1_4:63123851-63123870 Msa0176610:CDS 45.0%
!! AGAGCTTTAGGAGATCTCAC+TGG + chr1_4:63123918-63123937 Msa0176610:CDS 45.0%
GTAAGCATGGTGAGAAGAAG+TGG + chr1_4:63123961-63123980 Msa0176610:CDS 45.0%
!! CTGAAGTTTTGTCGGAAAGC+AGG + chr1_4:63124380-63124399 Msa0176610:intron 45.0%
AGGTGTATATTGTATGGCGC+AGG + chr1_4:63124760-63124779 Msa0176610:intron 45.0%
GCCCATTGCTGAAAAGAACA+TGG - chr1_4:63124972-63124991 None:intergenic 45.0%
AATAGAAGTAGAGGGCCCAT+GGG - chr1_4:63125292-63125311 None:intergenic 45.0%
GTGGCTACCTTTGTATTTGG+TGG + chr1_4:63125403-63125422 Msa0176610:intron 45.0%
GAGTACTCCCAAAAGGGTTA+GGG - chr1_4:63125752-63125771 None:intergenic 45.0%
TGAGTACTCCCAAAAGGGTT+AGG - chr1_4:63125753-63125772 None:intergenic 45.0%
!! ACTTTGGTGGTGTTGATCCA+AGG - chr1_4:63125884-63125903 None:intergenic 45.0%
GGAATGGTCAGAAACATGAG+TGG + chr1_4:63126593-63126612 Msa0176610:CDS 45.0%
ATGGTCAGAAACATGAGTGG+TGG + chr1_4:63126596-63126615 Msa0176610:CDS 45.0%
!! TATAATTTATATAATCAATT+AGG + chr1_4:63125433-63125452 Msa0176610:intron 5.0%
!! AGCTACTTGCTTGGTGTTCC+AGG - chr1_4:63123169-63123188 None:intergenic 50.0%
AAGCTCTTGAAGGGTCGTGA+TGG - chr1_4:63123905-63123924 None:intergenic 50.0%
CACGACCCTTCAAGAGCTTT+AGG + chr1_4:63123906-63123925 Msa0176610:CDS 50.0%
ATTGTGGCACCCTCTTCTCT+AGG + chr1_4:63124072-63124091 Msa0176610:CDS 50.0%
CAATAGAAGTAGAGGGCCCA+TGG - chr1_4:63125293-63125312 None:intergenic 50.0%
AATGCAGTGGCAGACATGTG+AGG - chr1_4:63126275-63126294 None:intergenic 50.0%
! TGATGGACGCATGTGGGCTC+AGG - chr1_4:63123888-63123907 None:intergenic 60.0%
!! GGGTCGTGATGGACGCATGT+GGG - chr1_4:63123894-63123913 None:intergenic 60.0%
!! AGGGTCGTGATGGACGCATG+TGG - chr1_4:63123895-63123914 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 63122653 63126940 63122653 ID=Msa0176610;Name=Msa0176610
chr1_4 mRNA 63122653 63126940 63122653 ID=Msa0176610-mRNA-1;Parent=Msa0176610;Name=Msa0176610-mRNA-1;_AED=0.10;_eAED=0.10;_QI=118|0.5|0.8|1|0.75|0.6|5|204|562
chr1_4 exon 63122653 63122752 63122653 ID=Msa0176610-mRNA-1:exon:20353;Parent=Msa0176610-mRNA-1
chr1_4 exon 63122992 63123182 63122992 ID=Msa0176610-mRNA-1:exon:20354;Parent=Msa0176610-mRNA-1
chr1_4 exon 63123501 63123565 63123501 ID=Msa0176610-mRNA-1:exon:20355;Parent=Msa0176610-mRNA-1
chr1_4 exon 63123697 63124093 63123697 ID=Msa0176610-mRNA-1:exon:20356;Parent=Msa0176610-mRNA-1
chr1_4 exon 63125683 63126940 63125683 ID=Msa0176610-mRNA-1:exon:20357;Parent=Msa0176610-mRNA-1
chr1_4 five_prime_UTR 63122653 63122752 63122653 ID=Msa0176610-mRNA-1:five_prime_utr;Parent=Msa0176610-mRNA-1
chr1_4 five_prime_UTR 63122992 63123009 63122992 ID=Msa0176610-mRNA-1:five_prime_utr;Parent=Msa0176610-mRNA-1
chr1_4 CDS 63123010 63123182 63123010 ID=Msa0176610-mRNA-1:cds;Parent=Msa0176610-mRNA-1
chr1_4 CDS 63123501 63123565 63123501 ID=Msa0176610-mRNA-1:cds;Parent=Msa0176610-mRNA-1
chr1_4 CDS 63123697 63124093 63123697 ID=Msa0176610-mRNA-1:cds;Parent=Msa0176610-mRNA-1
chr1_4 CDS 63125683 63126736 63125683 ID=Msa0176610-mRNA-1:cds;Parent=Msa0176610-mRNA-1
chr1_4 three_prime_UTR 63126737 63126940 63126737 ID=Msa0176610-mRNA-1:three_prime_utr;Parent=Msa0176610-mRNA-1
Gene Sequence

>Msa0176610

ATGGCGGCTGCTTCTTCATCTACATCATTCTTTGGAATCAGAGAAGAAAATCAAAGTCAAATAACACATCATCATCCTCATCCTCAATCAACTACTACTTCTGCTACTTCTTCAGCTCCTTCAACCACAGTTCCTCAAAAGAAAAGAAGGAATCAACCTGGAACACCAAGCAAAAAAAATAACAATGACAATTTACAACAAAGTTCTTCAGTTCATGATGCATATATATTCAATTTGAATCCAGATGCAGAAGTGATAGCACTATCTCCCAAGACTCTAATGGCAACAAATAGATTTATATGTGAGGTTTGCAACAAAGGGTTTCAAAGGGAGCAAAATCTTCAACTTCATAGAAGAGGACACAATCTTCCTTGGAAGCTAAAGCAAAAGTCCAACAAAGAGCCAAGGAGAAAGGTTTATTTGTGTCCTGAGCCCACATGCGTCCATCACGACCCTTCAAGAGCTTTAGGAGATCTCACTGGAATTAAAAAGCATTACTCTCGTAAGCATGGTGAGAAGAAGTGGAAATGTGAAAAGTGCTCAAAGAAATATGCTGTTCAATCTGATTGGAAAGCACATTCTAAGACTTGTGGTACTAGAGAATATAGATGTGATTGTGGCACCCTCTTCTCTAGGCGTGACAGTTTCATCACTCATAGGGCATTTTGTGATGCACTAGCACAAGAGAGTGTATTAAGACACCCTAACCCTTTTGGGAGTACTCATCAATTGTATGCCACAAACCATCACATTAGTTTAGGCCAAATATCCCATCAATTGCAAAATCATCAGAACCAAATTACATCATCCACTAGCAATAACAACATTTTGCGCCTTGGATCAACACCACCAAAGTTTGAACAACACTTAATATCATCACCACCTTTAAATCACTCTTCATCATTTGGACACTCAATTCCATCTTCATCACCATTCTTCAATATGAGTGATATTTCAAATCAATCCTTTGAAGAACAACAATCTCAACAAGGACAATTCTTAAACAAACAACTACATGGTCTAATGCATCTTCCTGATCTTCAAGGCAATACAAATACAAACAATTCAAATTCTTCCAATCTTTTCAACCTTATGGTTCATGATCAATTCAACAACCTGAGTAGTAACCAAGGAACAACACTTTACATTAACAACAATAACCCTTTAAGTGATCATCAAGTTGGTTTTGTCAATTCAATGCAACATGGTCAAAACATGTCTAGTCCTCACATGTCTGCCACTGCATTGCTTCAAAAAGCTTCTCAGATTGGTTCAACTAATTCTACCAACAATAACAAAGGTAGTAATAATGATCATAAATCAGCTGATAGGGACTTTGTTGTGTCTGATCACAACAACATCAATGTCACTTTTGGAAATAGAAGTTCAAGTATGGAAAATGATCATGATGACAACAACGATCTTCATGGATTGATAAACTCTATTGCAAATGGAAACACATCATCCATATTTGGCAATGAAAGCAATCTTAATATGAGATTTGGTGGATCTGATAAGTTAACTTTAGATTTTCTTGGTGTTGGAGGAATGGTCAGAAACATGAGTGGTGGATTTTCACAAAGTGAACAACAACGTGACATGATGAATACTAGCATGGCTTCTTTGAATCATGACCTAAAATCAGCACATTCAACTCAACATTTTGGAAGCTCAAATATGTTGCAATGA
Protein sequence

>Msa0176610

MAAASSSTSFFGIREENQSQITHHHPHPQSTTTSATSSAPSTTVPQKKRRNQPGTPSKKNNNDNLQQSSSVHDAYIFNLNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESVLRHPNPFGSTHQLYATNHHISLGQISHQLQNHQNQITSSTSNNNILRLGSTPPKFEQHLISSPPLNHSSSFGHSIPSSSPFFNMSDISNQSFEEQQSQQGQFLNKQLHGLMHLPDLQGNTNTNNSNSSNLFNLMVHDQFNNLSSNQGTTLYINNNNPLSDHQVGFVNSMQHGQNMSSPHMSATALLQKASQIGSTNSTNNNKGSNNDHKSADRDFVVSDHNNINVTFGNRSSSMENDHDDNNDLHGLINSIANGNTSSIFGNESNLNMRFGGSDKLTLDFLGVGGMVRNMSGGFSQSEQQRDMMNTSMASLNHDLKSAHSTQHFGSSNMLQ*