Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0294650 | XP_024632265.1 | 97.335 | 713 | 17 | 2 | 1 | 713 | 1 | 711 | 0.0 | 1416 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0294650 | sp|Q8L636|NCL_ARATH | 35.181 | 415 | 247 | 7 | 29 | 442 | 31 | 424 | 5.78e-79 | 266 |
| Msa0294650 | sp|Q8L636|NCL_ARATH | 39.144 | 327 | 175 | 4 | 401 | 706 | 255 | 578 | 1.38e-60 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0048920 | Msa0294650 | 0.820739 | 5.851014e-53 | -8.615850e-47 |
| Msa0136010 | Msa0294650 | -0.806445 | 8.197835e-50 | -8.615850e-47 |
| Msa0186750 | Msa0294650 | 0.806272 | 8.916543e-50 | -8.615850e-47 |
| Msa0232170 | Msa0294650 | 0.823074 | 1.684864e-53 | -8.615850e-47 |
| Msa0255700 | Msa0294650 | 0.847098 | 1.433712e-59 | -8.615850e-47 |
| Msa0294650 | Msa0310260 | 0.807437 | 5.055902e-50 | -8.615850e-47 |
| Msa0294650 | Msa0333290 | 0.885615 | 6.976820e-72 | -8.615850e-47 |
| Msa0294650 | Msa0384130 | 0.806395 | 8.400818e-50 | -8.615850e-47 |
| Msa0294650 | Msa0440450 | 0.807898 | 4.035442e-50 | -8.615850e-47 |
| Msa0294650 | Msa0545520 | 0.842000 | 3.377646e-58 | -8.615850e-47 |
| Msa0294650 | Msa0545910 | 0.822261 | 2.603821e-53 | -8.615850e-47 |
| Msa0294650 | Msa0598610 | 0.821584 | 3.736494e-53 | -8.615850e-47 |
| Msa0294650 | Msa0606260 | 0.809066 | 2.273852e-50 | -8.615850e-47 |
| Msa0294650 | Msa0624890 | 0.841394 | 4.880302e-58 | -8.615850e-47 |
| Msa0294650 | Msa0641970 | 0.843528 | 1.325853e-58 | -8.615850e-47 |
| Msa0294650 | Msa0714230 | 0.810456 | 1.142378e-50 | -8.615850e-47 |
| Msa0294650 | Msa0742690 | 0.802879 | 4.550019e-49 | -8.615850e-47 |
| Msa0294650 | Msa0827560 | 0.801753 | 7.759913e-49 | -8.615850e-47 |
| Msa0294650 | Msa0883880 | 0.808046 | 3.753585e-50 | -8.615850e-47 |
| Msa0294650 | Msa0948820 | 0.809828 | 1.560030e-50 | -8.615850e-47 |
| Msa0294650 | Msa0970940 | 0.802302 | 5.982618e-49 | -8.615850e-47 |
| Msa0294650 | Msa0985980 | 0.808723 | 2.692288e-50 | -8.615850e-47 |
| Msa0294650 | Msa1041620 | 0.807932 | 3.968691e-50 | -8.615850e-47 |
| Msa0294650 | Msa1235960 | 0.814603 | 1.416265e-51 | -8.615850e-47 |
| Msa0294650 | Msa1235990 | 0.811532 | 6.679320e-51 | -8.615850e-47 |
| Msa0294650 | Msa1258600 | -0.803631 | 3.179468e-49 | -8.615850e-47 |
| Msa0294650 | Msa1316090 | 0.818007 | 2.453665e-52 | -8.615850e-47 |
| Msa0294650 | Msa1344460 | -0.800886 | 1.167865e-48 | -8.615850e-47 |
| Msa0294650 | Msa1376520 | -0.822891 | 1.858387e-53 | -8.615850e-47 |
| Msa0294650 | Msa1389500 | 0.805337 | 1.401760e-49 | -8.615850e-47 |
| Msa0294650 | Msa1400940 | -0.807574 | 4.729353e-50 | -8.615850e-47 |
| Msa0294650 | Msa1413600 | 0.806778 | 6.972359e-50 | -8.615850e-47 |
| Msa0294650 | Msa1414000 | 0.808996 | 2.353957e-50 | -8.615850e-47 |
| Msa0294650 | Msa1429190 | -0.817074 | 3.982698e-52 | -8.615850e-47 |
| Msa0294650 | Msa1434850 | 0.812997 | 3.199159e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0294650 | MtrunA17_Chr2g0316531 | 97.335 | 713 | 17 | 2 | 1 | 713 | 1 | 711 | 0.0 | 1416 |
| Msa0294650 | MtrunA17_Chr2g0316541 | 86.695 | 714 | 91 | 3 | 1 | 713 | 1 | 711 | 0.0 | 1245 |
| Msa0294650 | MtrunA17_Chr2g0316431 | 35.864 | 382 | 214 | 6 | 10 | 387 | 21 | 375 | 8.69e-79 | 263 |
| Msa0294650 | MtrunA17_Chr2g0316431 | 39.628 | 323 | 177 | 7 | 401 | 706 | 252 | 573 | 9.78e-67 | 230 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0294650 | AT1G53210.1 | 35.181 | 415 | 247 | 7 | 29 | 442 | 31 | 424 | 5.87e-80 | 266 |
| Msa0294650 | AT1G53210.1 | 39.144 | 327 | 175 | 4 | 401 | 706 | 255 | 578 | 1.41e-61 | 217 |
| Msa0294650 | AT1G29020.1 | 33.115 | 305 | 182 | 8 | 410 | 704 | 256 | 548 | 6.90e-43 | 164 |
| Msa0294650 | AT1G29020.1 | 25.515 | 388 | 243 | 10 | 22 | 396 | 20 | 374 | 4.65e-33 | 135 |
| Msa0294650 | AT1G29020.2 | 33.115 | 305 | 182 | 8 | 410 | 704 | 289 | 581 | 1.35e-42 | 164 |
| Msa0294650 | AT1G29020.2 | 24.510 | 408 | 255 | 10 | 22 | 396 | 20 | 407 | 2.49e-32 | 133 |
| Msa0294650 | AT1G29025.1 | 27.344 | 384 | 248 | 9 | 22 | 389 | 19 | 387 | 3.45e-36 | 144 |
| Msa0294650 | AT1G29025.1 | 32.581 | 310 | 184 | 7 | 411 | 705 | 271 | 570 | 4.56e-36 | 144 |
| Msa0294650 | AT2G34020.1 | 28.701 | 331 | 213 | 6 | 397 | 705 | 273 | 602 | 1.05e-35 | 143 |
| Msa0294650 | AT2G34020.1 | 25.888 | 394 | 254 | 10 | 29 | 404 | 46 | 419 | 2.35e-34 | 139 |
| Msa0294650 | AT2G34030.1 | 29.560 | 318 | 207 | 7 | 405 | 711 | 253 | 564 | 4.72e-32 | 132 |
| Msa0294650 | AT2G34030.1 | 24.675 | 385 | 260 | 10 | 31 | 408 | 36 | 397 | 1.50e-27 | 118 |
| Msa0294650 | AT2G34020.2 | 29.520 | 271 | 172 | 4 | 454 | 705 | 365 | 635 | 2.70e-31 | 130 |
| Msa0294650 | AT2G34020.2 | 24.883 | 426 | 251 | 13 | 29 | 404 | 46 | 452 | 2.22e-29 | 124 |
Find 131 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTCATTTATTTCTGATTT+TGG | 0.111752 | 2_3:-46647839 | Msa0294650:CDS |
| TCCATTGGAAATCAATTTAT+TGG | 0.127818 | 2_3:+46648008 | None:intergenic |
| CCTAATGTAGCTGCCATAAA+TGG | 0.132670 | 2_3:-46644801 | Msa0294650:CDS |
| TTTGGGTCATTGCAGATTTA+TGG | 0.164534 | 2_3:-46641466 | Msa0294650:intron |
| TTGAAGGGACATCTTATTTC+TGG | 0.167355 | 2_3:-46643347 | Msa0294650:CDS |
| CCTGAATCCTTAATTCTTCT+TGG | 0.168153 | 2_3:-46647697 | Msa0294650:intron |
| CCATGTTCTAATAACATTCT+TGG | 0.194031 | 2_3:-46647859 | Msa0294650:CDS |
| AAATCTGACTCACCCATTTA+TGG | 0.207244 | 2_3:+46644788 | None:intergenic |
| ATTCCATGGAGAATCATATT+TGG | 0.230860 | 2_3:-46647800 | Msa0294650:CDS |
| ATTCTTCTTTGGTTATAATT+TGG | 0.231142 | 2_3:+46643834 | None:intergenic |
| CCCCATGTTGACTGAATTCA+TGG | 0.236145 | 2_3:+46643975 | None:intergenic |
| ACTAATTTCATTGTCTTTGT+TGG | 0.251278 | 2_3:+46643004 | None:intergenic |
| GCCACTAACAAATTCTTCTT+TGG | 0.253466 | 2_3:+46643823 | None:intergenic |
| AATTGCTATGTTGTCGCTTC+TGG | 0.267443 | 2_3:-46642421 | Msa0294650:CDS |
| TTAGCTTGATATCAAAATTA+AGG | 0.271766 | 2_3:+46641199 | None:intergenic |
| GAACAAATCTTCAAGATTCT+TGG | 0.301871 | 2_3:-46647766 | Msa0294650:CDS |
| AAGCATACCAAGAAGAATTA+AGG | 0.304389 | 2_3:+46647690 | None:intergenic |
| CCATTTATGGCAGCTACATT+AGG | 0.318327 | 2_3:+46644801 | None:intergenic |
| GTATCTAATATCATTGGTTA+TGG | 0.321573 | 2_3:-46641260 | Msa0294650:CDS |
| GATAGGTTATGGCATTACTA+TGG | 0.332693 | 2_3:-46645516 | Msa0294650:intron |
| CCAAGAAGAATTAAGGATTC+AGG | 0.344838 | 2_3:+46647697 | None:intergenic |
| TATCCAAAGCATGCTTTGTT+TGG | 0.347188 | 2_3:+46643783 | None:intergenic |
| AGAATTTGAGTTTATCCATT+TGG | 0.348639 | 2_3:+46642956 | None:intergenic |
| CCATTGGAAATCAATTTATT+GGG | 0.359879 | 2_3:+46648009 | None:intergenic |
| ATCTATGAACAAAATGTATC+AGG | 0.369645 | 2_3:-46643741 | Msa0294650:intron |
| GTGTTTATGAACAACATTCT+TGG | 0.370916 | 2_3:-46641439 | Msa0294650:CDS |
| ACCAAAGAAGAATTTGTTAG+TGG | 0.372618 | 2_3:-46643824 | Msa0294650:CDS |
| AAGTCATGCTCAAAATGATA+TGG | 0.374538 | 2_3:-46643318 | Msa0294650:CDS |
| AGTGAGAATGAATTTGTTGA+TGG | 0.378891 | 2_3:-46642984 | Msa0294650:CDS |
| TAACCATGCAGTCACCCCTT+TGG | 0.396965 | 2_3:+46642470 | None:intergenic |
| TAACCAAACAAAGCATGCTT+TGG | 0.398521 | 2_3:-46643786 | Msa0294650:CDS |
| ATTAGATACAAGAGGTATGT+TGG | 0.398858 | 2_3:+46641274 | None:intergenic |
| TCTTCCATTTGATGAATATG+AGG | 0.402559 | 2_3:+46646563 | None:intergenic |
| CCTCTTGTATCTAATATCAT+TGG | 0.406295 | 2_3:-46641266 | Msa0294650:CDS |
| GGCAATTGTTTGTATTGTGA+TGG | 0.409059 | 2_3:-46641344 | Msa0294650:CDS |
| AGGTTATTCGAGCAAGTTGA+TGG | 0.409987 | 2_3:-46643143 | Msa0294650:CDS |
| GAGTATTGTAAACAAATGTA+TGG | 0.419297 | 2_3:-46647889 | Msa0294650:CDS |
| GAAGTAAAAGAGTTGTTGCT+TGG | 0.423281 | 2_3:-46643932 | Msa0294650:CDS |
| ACTGGAGTTGGATTGTTAGC+TGG | 0.429890 | 2_3:-46646675 | Msa0294650:CDS |
| TTGTTGATGGCTTCACCAAA+TGG | 0.432286 | 2_3:-46642971 | Msa0294650:CDS |
| AAAATCTAGATATGGTTCAT+TGG | 0.436858 | 2_3:-46641096 | Msa0294650:three_prime_UTR |
| GAACAACATTCTTGGCTTTG+TGG | 0.441869 | 2_3:-46641431 | Msa0294650:CDS |
| CCCAATAAATTGATTTCCAA+TGG | 0.444689 | 2_3:-46648009 | Msa0294650:CDS |
| GATACCTCATATTCATCAAA+TGG | 0.449371 | 2_3:-46646567 | Msa0294650:CDS |
| CACTGGACTTTCAAGTGATA+AGG | 0.450927 | 2_3:-46646721 | Msa0294650:CDS |
| TATGAGTACTTGTTATTCCA+TGG | 0.456039 | 2_3:-46647814 | Msa0294650:CDS |
| TTTCTCACGTGTTCAATCCA+TGG | 0.456370 | 2_3:+46643380 | None:intergenic |
| TCAATTTATTGGGAAGAAAA+CGG | 0.458579 | 2_3:+46648019 | None:intergenic |
| GAGAAAAGAACGTGAATTGA+AGG | 0.458601 | 2_3:-46643363 | Msa0294650:CDS |
| TGGAAGAGAATCAAACCAAA+GGG | 0.459663 | 2_3:-46642485 | Msa0294650:CDS |
| AACTGAGAAAAGAGAAATAG+TGG | 0.459912 | 2_3:+46648135 | None:intergenic |
| CCTGCTTCTCACAGTTGTGT+GGG | 0.461639 | 2_3:-46646643 | Msa0294650:CDS |
| AGCTATAGCATATGTGATGT+TGG | 0.463435 | 2_3:-46642445 | Msa0294650:CDS |
| GTCCTCTCTGATATTTGTGT+CGG | 0.465420 | 2_3:+46643898 | None:intergenic |
| AGCTCAAAATCTTCTTCTCA+TGG | 0.466725 | 2_3:-46642921 | Msa0294650:CDS |
| CATCTCATACTTCATTTACC+AGG | 0.467416 | 2_3:-46645348 | Msa0294650:intron |
| CTAATGTAGCTGCCATAAAT+GGG | 0.468804 | 2_3:-46644800 | Msa0294650:intron |
| GTAGTGAGGGAGACTCATTT+TGG | 0.469435 | 2_3:-46643080 | Msa0294650:CDS |
| AACTCAAATTCTAGTAAAGC+AGG | 0.473066 | 2_3:-46642945 | Msa0294650:CDS |
| AGAATAAAACAAGCTTTGAC+TGG | 0.476703 | 2_3:-46646543 | Msa0294650:intron |
| AAGTAAAAGAGTTGTTGCTT+GGG | 0.476825 | 2_3:-46643931 | Msa0294650:CDS |
| CTCTAAAATTTGTAGCCAAA+GGG | 0.478062 | 2_3:+46642319 | None:intergenic |
| GCAATTGTTTGTATTGTGAT+GGG | 0.481583 | 2_3:-46641343 | Msa0294650:CDS |
| ATCTTCAAGATTCTTGGTCC+AGG | 0.484678 | 2_3:-46647760 | Msa0294650:CDS |
| GGAGAATCATATTTGGCTGC+TGG | 0.485636 | 2_3:-46647793 | Msa0294650:CDS |
| GCTATAGCATATGTGATGTT+GGG | 0.487166 | 2_3:-46642444 | Msa0294650:CDS |
| TCTCTAAAATTTGTAGCCAA+AGG | 0.487209 | 2_3:+46642318 | None:intergenic |
| TGTCTGATAGTCAGAATGTA+TGG | 0.489134 | 2_3:-46641066 | Msa0294650:three_prime_UTR |
| TTAGATACAAGAGGTATGTT+GGG | 0.494840 | 2_3:+46641275 | None:intergenic |
| TCCTGCTTCTCACAGTTGTG+TGG | 0.499987 | 2_3:-46646644 | Msa0294650:CDS |
| ATAATGATGATAATGACAAA+GGG | 0.500200 | 2_3:-46647942 | Msa0294650:CDS |
| TAGAAAGATGGCAAGAATCA+TGG | 0.500404 | 2_3:-46645483 | Msa0294650:CDS |
| CCCACACAACTGTGAGAAGC+AGG | 0.506345 | 2_3:+46646643 | None:intergenic |
| GAGTATGCTTCCACTGGAGT+TGG | 0.510075 | 2_3:-46646687 | Msa0294650:CDS |
| CCTCACTACTTTCTCTAACT+CGG | 0.512226 | 2_3:+46643094 | None:intergenic |
| CTGATAAAGATGCTATCAAA+AGG | 0.515493 | 2_3:-46643265 | Msa0294650:intron |
| CTGCTTCTCACAGTTGTGTG+GGG | 0.517244 | 2_3:-46646642 | Msa0294650:CDS |
| GAGTAGGAATCTGCATTATG+AGG | 0.520550 | 2_3:+46645441 | None:intergenic |
| GGAAGATGTTGAGAAGGTAA+TGG | 0.527786 | 2_3:-46642505 | Msa0294650:CDS |
| CAAAAGATCCTAGCTGAGGA+TGG | 0.534878 | 2_3:-46644828 | Msa0294650:CDS |
| AATAATGATGATAATGACAA+AGG | 0.536791 | 2_3:-46647943 | Msa0294650:CDS |
| GCGCAAGAGTATGCTTCCAC+TGG | 0.540034 | 2_3:-46646693 | Msa0294650:CDS |
| TACTTCTCACACAATGTATG+AGG | 0.540505 | 2_3:-46642250 | Msa0294650:intron |
| GGATGTCCACAGAGGAAAAG+TGG | 0.542719 | 2_3:+46641300 | None:intergenic |
| AGTATTGTAAACAAATGTAT+GGG | 0.543326 | 2_3:-46647888 | Msa0294650:CDS |
| GTAGAGAAAGAGAACAGAGT+AGG | 0.543401 | 2_3:+46645425 | None:intergenic |
| AAACCAAAGGGGTGACTGCA+TGG | 0.544322 | 2_3:-46642473 | Msa0294650:CDS |
| TGAATCTTCTTCTAATTCAG+AGG | 0.544738 | 2_3:-46647911 | Msa0294650:CDS |
| TTGAACATCATCAACTCCAT+TGG | 0.546197 | 2_3:+46647993 | None:intergenic |
| TACCATGAATTCAGTCAACA+TGG | 0.550517 | 2_3:-46643977 | Msa0294650:CDS |
| TTCGAGCAAGTTGATGGCGA+TGG | 0.551497 | 2_3:-46643137 | Msa0294650:CDS |
| CGAGTTAGAGAAAGTAGTGA+GGG | 0.552437 | 2_3:-46643093 | Msa0294650:CDS |
| GCTAGCTTCTTTGATTGCTG+AGG | 0.553027 | 2_3:+46642290 | None:intergenic |
| ATACAAGAGGTATGTTGGGA+AGG | 0.556594 | 2_3:+46641279 | None:intergenic |
| TATATATGAGAGATATCACT+TGG | 0.563447 | 2_3:-46641393 | Msa0294650:CDS |
| GGATATAGACACTAGAAAGA+TGG | 0.566650 | 2_3:-46645495 | Msa0294650:CDS |
| TTCAGCTGATGTATTGGTGG+TGG | 0.569076 | 2_3:-46641365 | Msa0294650:CDS |
| CTAACTCGGATCTTGAAACA+TGG | 0.570677 | 2_3:+46643108 | None:intergenic |
| TAGGAGTTCCATCCTCAGCT+AGG | 0.570837 | 2_3:+46644820 | None:intergenic |
| CAGCCAAATATGATTCTCCA+TGG | 0.571361 | 2_3:+46647797 | None:intergenic |
| CCAAGAATGTTATTAGAACA+TGG | 0.576847 | 2_3:+46647859 | None:intergenic |
| CATGCTCAAAATGATATGGT+TGG | 0.579422 | 2_3:-46643314 | Msa0294650:CDS |
| AATGATGAGAGAAACTATCA+AGG | 0.581313 | 2_3:+46645385 | None:intergenic |
| TGCTTCTCACAGTTGTGTGG+GGG | 0.582840 | 2_3:-46646641 | Msa0294650:CDS |
| CCGAGTTAGAGAAAGTAGTG+AGG | 0.583038 | 2_3:-46643094 | Msa0294650:CDS |
| GGATAGAAAGTACCTCCCTA+AGG | 0.588674 | 2_3:-46643765 | Msa0294650:CDS |
| GGTAGGATGCTCAATGATGA+TGG | 0.588759 | 2_3:-46643293 | Msa0294650:CDS |
| GAAGAATTAAGGATTCAGGA+AGG | 0.595239 | 2_3:+46647701 | None:intergenic |
| GACATGGGAAGATGTTGAGA+AGG | 0.598738 | 2_3:-46642511 | Msa0294650:CDS |
| GGAATCTGCATTATGAGGAG+TGG | 0.600129 | 2_3:+46645446 | None:intergenic |
| ACCATGAATTCAGTCAACAT+GGG | 0.600741 | 2_3:-46643976 | Msa0294650:CDS |
| AAGAATTAAGGATTCAGGAA+GGG | 0.601558 | 2_3:+46647702 | None:intergenic |
| TGGTAAGGCTGTAGATGCAG+AGG | 0.605117 | 2_3:-46643060 | Msa0294650:CDS |
| TGTTGGCATCAAGATCATGA+AGG | 0.608130 | 2_3:+46643021 | None:intergenic |
| AGAAAAGAACGTGAATTGAA+GGG | 0.610687 | 2_3:-46643362 | Msa0294650:CDS |
| ATGGAAGAGAATCAAACCAA+AGG | 0.619841 | 2_3:-46642486 | Msa0294650:CDS |
| CTCAAAATGATATGGTTGGT+AGG | 0.623371 | 2_3:-46643310 | Msa0294650:CDS |
| CACAACTGTGAGAAGCAGGA+TGG | 0.623998 | 2_3:+46646647 | None:intergenic |
| CCATGAATTCAGTCAACATG+GGG | 0.624062 | 2_3:-46643975 | Msa0294650:CDS |
| AGCTAACAATCCAACTCCAG+TGG | 0.632470 | 2_3:+46646677 | None:intergenic |
| TGTTCATAGATTCCTTAGGG+AGG | 0.638172 | 2_3:+46643753 | None:intergenic |
| TTGCTTGCCAACAATAACAC+AGG | 0.646292 | 2_3:+46646617 | None:intergenic |
| TCTACAAAAGATCCTAGCTG+AGG | 0.670159 | 2_3:-46644832 | Msa0294650:CDS |
| GAATCATATTTGGCTGCTGG+AGG | 0.671094 | 2_3:-46647790 | Msa0294650:CDS |
| AAAAGTGGAACGAAAACTAG+TGG | 0.676799 | 2_3:+46641315 | None:intergenic |
| CCAATGATATTAGATACAAG+AGG | 0.680585 | 2_3:+46641266 | None:intergenic |
| GGAAGAGAATCAAACCAAAG+GGG | 0.710553 | 2_3:-46642484 | Msa0294650:CDS |
| ATATATGAGAGATATCACTT+GGG | 0.731670 | 2_3:-46641392 | Msa0294650:CDS |
| AGCCGACACAAATATCAGAG+AGG | 0.740662 | 2_3:-46643900 | Msa0294650:CDS |
| CATGAATTCAGTCAACATGG+GGG | 0.753325 | 2_3:-46643974 | Msa0294650:CDS |
| GTTGGGAAGGATGTCCACAG+AGG | 0.762076 | 2_3:+46641292 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTAGAGTTTAATTTTT+AGG | - | chr2_3:46642797-46642816 | Msa0294650:intron | 10.0% |
| !!! | TATTTAGAGTTTAATTTTTA+GGG | - | chr2_3:46642798-46642817 | Msa0294650:intron | 10.0% |
| !! | CAAATAAAAAAAAACTATAA+AGG | + | chr2_3:46643656-46643675 | None:intergenic | 10.0% |
| !! | AATTGAGTAATTAATTTATA+TGG | + | chr2_3:46644216-46644235 | None:intergenic | 10.0% |
| !!! | TTGTCAAAATTTTAAAATTT+AGG | - | chr2_3:46646575-46646594 | Msa0294650:CDS | 10.0% |
| !!! | TGTCAAAATTTTAAAATTTA+GGG | - | chr2_3:46646576-46646595 | Msa0294650:CDS | 10.0% |
| !!! | AAACTAAAATTGTTTTTAAT+TGG | - | chr2_3:46647515-46647534 | Msa0294650:intron | 10.0% |
| !!! | GTAATATATATTTTTTTGAG+AGG | + | chr2_3:46641082-46641101 | None:intergenic | 15.0% |
| !! | ATCCATTATAAAAATATAAC+CGG | - | chr2_3:46641852-46641871 | Msa0294650:intron | 15.0% |
| !!! | TAAAAAAATCTATTCTAGTT+TGG | + | chr2_3:46642226-46642245 | None:intergenic | 15.0% |
| !!! | TTCTTTGATTTAATATTTGA+TGG | + | chr2_3:46642271-46642290 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr2_3:46643285-46643304 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr2_3:46643284-46643303 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | + | chr2_3:46643064-46643083 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr2_3:46643195-46643214 | Msa0294650:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr2_3:46643284-46643303 | Msa0294650:CDS | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr2_3:46643285-46643304 | Msa0294650:CDS | 15.0% |
| !! | TTTGATGTGTATAAAAATTA+GGG | + | chr2_3:46643359-46643378 | None:intergenic | 15.0% |
| !! | ATTTGATGTGTATAAAAATT+AGG | + | chr2_3:46643360-46643379 | None:intergenic | 15.0% |
| !! | TTAAAATTTATGATAGGTTA+TGG | - | chr2_3:46643714-46643733 | Msa0294650:intron | 15.0% |
| !! | AACTTAGTTGTATATTATAA+TGG | + | chr2_3:46643988-46644007 | None:intergenic | 15.0% |
| !! | AAATTACTATATTGTATAGT+TGG | + | chr2_3:46644171-46644190 | None:intergenic | 15.0% |
| !! | AACTATACAATATAGTAATT+TGG | - | chr2_3:46644170-46644189 | Msa0294650:intron | 15.0% |
| !!! | TATTAAAAAAATGGCAATTT+TGG | + | chr2_3:46644912-46644931 | None:intergenic | 15.0% |
| !!! | AAAATTGCCATTTTTTTAAT+AGG | - | chr2_3:46644911-46644930 | Msa0294650:CDS | 15.0% |
| !!! | AAATTGCCATTTTTTTAATA+GGG | - | chr2_3:46644912-46644931 | Msa0294650:CDS | 15.0% |
| !! | TATTAATTAAATGACACTAA+TGG | - | chr2_3:46644991-46645010 | Msa0294650:intron | 15.0% |
| !! | AAAACATTTATATATACTGT+CGG | + | chr2_3:46646032-46646051 | None:intergenic | 15.0% |
| !! | TTTCATAAATTTCACAAATT+GGG | + | chr2_3:46646445-46646464 | None:intergenic | 15.0% |
| !!! | TTTTCATAAATTTCACAAAT+TGG | + | chr2_3:46646446-46646465 | None:intergenic | 15.0% |
| !!! | AAAAATTCACATTGAATTTT+AGG | - | chr2_3:46646465-46646484 | Msa0294650:intron | 15.0% |
| !!! | TTTTTTTTACAAATGGTATA+TGG | - | chr2_3:46646693-46646712 | Msa0294650:CDS | 15.0% |
| !!! | TATCATTTTTTAAATGTTAC+TGG | + | chr2_3:46647185-46647204 | None:intergenic | 15.0% |
| !!! | AACTATATTTTCTTTTCATT+GGG | + | chr2_3:46647641-46647660 | None:intergenic | 15.0% |
| !! | TAAAATGAAAAATCGTAATT+AGG | + | chr2_3:46647670-46647689 | None:intergenic | 15.0% |
| !! | TAAATACTTATGTAAAGATT+TGG | - | chr2_3:46647757-46647776 | Msa0294650:CDS | 15.0% |
| !! | AAATACTTATGTAAAGATTT+GGG | - | chr2_3:46647758-46647777 | Msa0294650:CDS | 15.0% |
| !! | TGAAATAAAAAATCTAGATA+TGG | - | chr2_3:46648137-46648156 | Msa0294650:five_prime_UTR | 15.0% |
| !!! | ATATATATTTTTTTGAGAGG+TGG | + | chr2_3:46641079-46641098 | None:intergenic | 20.0% |
| !!! | AATAATGATGATAATGACAA+AGG | - | chr2_3:46641298-46641317 | Msa0294650:CDS | 20.0% |
| !!! | ATAATGATGATAATGACAAA+GGG | - | chr2_3:46641299-46641318 | Msa0294650:CDS | 20.0% |
| !! | AGTATTGTAAACAAATGTAT+GGG | - | chr2_3:46641353-46641372 | Msa0294650:CDS | 20.0% |
| !! | AAAACAAGAACTACATAATT+AGG | + | chr2_3:46641700-46641719 | None:intergenic | 20.0% |
| !!! | AATGGATTTTTTTATAAACC+TGG | + | chr2_3:46641839-46641858 | None:intergenic | 20.0% |
| !!! | AACCGGTTATATTTTTATAA+TGG | + | chr2_3:46641857-46641876 | None:intergenic | 20.0% |
| !! | TTATAAACCGAAGTTAAAAA+TGG | - | chr2_3:46641884-46641903 | Msa0294650:intron | 20.0% |
| !!! | AGAAAAACCATTTTTAACTT+CGG | + | chr2_3:46641894-46641913 | None:intergenic | 20.0% |
| !! | TAATTCATATGTATGAAAGT+GGG | + | chr2_3:46641979-46641998 | None:intergenic | 20.0% |
| !! | ATAATTCATATGTATGAAAG+TGG | + | chr2_3:46641980-46641999 | None:intergenic | 20.0% |
| !! | TTGAATTACCACTAAAATAA+AGG | - | chr2_3:46642163-46642182 | Msa0294650:intron | 20.0% |
| !!! | AAGAAAACCTCTTTTTTTTA+AGG | - | chr2_3:46642286-46642305 | Msa0294650:CDS | 20.0% |
| !!! | AGAAAACCTCTTTTTTTTAA+GGG | - | chr2_3:46642287-46642306 | Msa0294650:CDS | 20.0% |
| !! | TATGATATATACAGTTAAGA+GGG | + | chr2_3:46642363-46642382 | None:intergenic | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | + | chr2_3:46642934-46642953 | None:intergenic | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | + | chr2_3:46642935-46642954 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | + | chr2_3:46643029-46643048 | None:intergenic | 20.0% |
| !! | AAAAAACTATAAAGGAGTTA+AGG | + | chr2_3:46643648-46643667 | None:intergenic | 20.0% |
| !! | AGATTAACTTAATTGCAAAT+AGG | + | chr2_3:46643936-46643955 | None:intergenic | 20.0% |
| !!! | ACAATATAGTAATTTGGAAT+TGG | - | chr2_3:46644176-46644195 | Msa0294650:intron | 20.0% |
| !!! | CAATATAGTAATTTGGAATT+GGG | - | chr2_3:46644177-46644196 | Msa0294650:intron | 20.0% |
| !! | AATAATCTGAAAACAACATA+TGG | + | chr2_3:46644596-46644615 | None:intergenic | 20.0% |
| !! | TAATAGTTATCACTTCTTTA+AGG | - | chr2_3:46644647-46644666 | Msa0294650:intron | 20.0% |
| !!! | TTGCAACATTTTAAAACTTA+GGG | + | chr2_3:46644708-46644727 | None:intergenic | 20.0% |
| !!! | ATTGCAACATTTTAAAACTT+AGG | + | chr2_3:46644709-46644728 | None:intergenic | 20.0% |
| !!! | GTTTTAAAATGTTGCAATTT+TGG | - | chr2_3:46644711-46644730 | Msa0294650:intron | 20.0% |
| !!! | TTTGCCATTTTTTTAATAGA+AGG | + | chr2_3:46644737-46644756 | None:intergenic | 20.0% |
| !! | ATCATATTTCTCTTATGTTA+GGG | + | chr2_3:46644799-46644818 | None:intergenic | 20.0% |
| !!! | TTCTAAAAAAGTTGCAATTA+TGG | - | chr2_3:46644835-46644854 | Msa0294650:CDS | 20.0% |
| !!! | AATTGCCATTTTTTTAATAG+GGG | - | chr2_3:46644913-46644932 | Msa0294650:CDS | 20.0% |
| !!! | GTGTCATTTAATTAATAACA+AGG | + | chr2_3:46644988-46645007 | None:intergenic | 20.0% |
| !!! | TTAAAAGCTTTTGACAAAAA+TGG | - | chr2_3:46645381-46645400 | Msa0294650:CDS | 20.0% |
| !! | ATTCTTCTTTGGTTATAATT+TGG | + | chr2_3:46645410-46645429 | None:intergenic | 20.0% |
| !! | TTTCTAATTTAAAAAAGGGA+AGG | + | chr2_3:46646414-46646433 | None:intergenic | 20.0% |
| !! | TTCATAAATTTCACAAATTG+GGG | + | chr2_3:46646444-46646463 | None:intergenic | 20.0% |
| !! | TAAATGAGTCAAAAATTAAG+TGG | - | chr2_3:46646542-46646561 | Msa0294650:intron | 20.0% |
| !!! | AAGTATTACTACTTTTTTTG+TGG | + | chr2_3:46646976-46646995 | None:intergenic | 20.0% |
| !! | AAATCTCATATATATTGTAG+TGG | + | chr2_3:46647039-46647058 | None:intergenic | 20.0% |
| !! | AGTAATATTTGATAAGTGTT+AGG | - | chr2_3:46647113-46647132 | Msa0294650:intron | 20.0% |
| !! | GATGAAATTATATACAATCA+AGG | + | chr2_3:46647543-46647562 | None:intergenic | 20.0% |
| !! | TAATTAGATTAGAGTTTATG+TGG | + | chr2_3:46647596-46647615 | None:intergenic | 20.0% |
| !!! | GAACTATATTTTCTTTTCAT+TGG | + | chr2_3:46647642-46647661 | None:intergenic | 20.0% |
| !! | TGAAAAGAAAATATAGTTCA+AGG | - | chr2_3:46647643-46647662 | Msa0294650:intron | 20.0% |
| !! | TAAATCCTCAAATAATTTGA+AGG | - | chr2_3:46647702-46647721 | Msa0294650:CDS | 20.0% |
| !!! | TTAGCTTGATATCAAAATTA+AGG | + | chr2_3:46648045-46648064 | None:intergenic | 20.0% |
| !!! | TTAATTTTGATATCAAGCTA+AGG | - | chr2_3:46648044-46648063 | Msa0294650:CDS | 20.0% |
| !! | TTGTCTTGATATCAAAATTA+AGG | + | chr2_3:46648115-46648134 | None:intergenic | 20.0% |
| !!! | TTAATTTTGATATCAAGACA+AGG | - | chr2_3:46648114-46648133 | Msa0294650:five_prime_UTR | 20.0% |
| ! | TCAATTTATTGGGAAGAAAA+CGG | + | chr2_3:46641225-46641244 | None:intergenic | 25.0% |
| ! | CCATTGGAAATCAATTTATT+GGG | + | chr2_3:46641235-46641254 | None:intergenic | 25.0% |
| ! | TCCATTGGAAATCAATTTAT+TGG | + | chr2_3:46641236-46641255 | None:intergenic | 25.0% |
| !! | GAGTATTGTAAACAAATGTA+TGG | - | chr2_3:46641352-46641371 | Msa0294650:CDS | 25.0% |
| !!! | TGGTCATTTATTTCTGATTT+TGG | - | chr2_3:46641402-46641421 | Msa0294650:CDS | 25.0% |
| !!! | TATAAACCTGGTTTTCAAAA+AGG | + | chr2_3:46641827-46641846 | None:intergenic | 25.0% |
| !! | TAAAAATGGTTTTTCTCTTG+TGG | - | chr2_3:46641898-46641917 | Msa0294650:intron | 25.0% |
| ! | GACATTTAGCATGTAAAATA+TGG | + | chr2_3:46642194-46642213 | None:intergenic | 25.0% |
| !! | TATTTTACATGCTAAATGTC+CGG | - | chr2_3:46642194-46642213 | Msa0294650:intron | 25.0% |
| !!! | ATAAGTGTCTCTTTTTTTTG+AGG | - | chr2_3:46642245-46642264 | Msa0294650:intron | 25.0% |
| ! | TTGATTCCCTTAAAAAAAAG+AGG | + | chr2_3:46642296-46642315 | None:intergenic | 25.0% |
| ! | TTAAGGGAATCAAATAATAG+TGG | - | chr2_3:46642303-46642322 | Msa0294650:CDS | 25.0% |
| ! | GTATGATATATACAGTTAAG+AGG | + | chr2_3:46642364-46642383 | None:intergenic | 25.0% |
| !!! | CATACACATTTTTTTTTGAG+AGG | - | chr2_3:46642385-46642404 | Msa0294650:CDS | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | + | chr2_3:46642901-46642920 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | - | chr2_3:46643223-46643242 | Msa0294650:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | - | chr2_3:46643224-46643243 | Msa0294650:intron | 25.0% |
| ! | GTTGTAAACCTTAATATTGT+AGG | - | chr2_3:46644023-46644042 | Msa0294650:intron | 25.0% |
| ! | AACATTTCTCAACTGATTAA+AGG | - | chr2_3:46644481-46644500 | Msa0294650:intron | 25.0% |
| ! | ACTATTATCATAAACTATCC+TGG | + | chr2_3:46644634-46644653 | None:intergenic | 25.0% |
| !!! | TGCAACATTTTAAAACTTAG+GGG | + | chr2_3:46644707-46644726 | None:intergenic | 25.0% |
| !! | TTGGCCTTCTATTAAAAAAA+TGG | - | chr2_3:46644730-46644749 | Msa0294650:intron | 25.0% |
| ! | TCATATTTCTCTTATGTTAG+GGG | + | chr2_3:46644798-46644817 | None:intergenic | 25.0% |
| ! | GATCATATTTCTCTTATGTT+AGG | + | chr2_3:46644800-46644819 | None:intergenic | 25.0% |
| !!! | CAACTTTTTTAGAAGATAAG+GGG | + | chr2_3:46644829-46644848 | None:intergenic | 25.0% |
| !!! | GCAACTTTTTTAGAAGATAA+GGG | + | chr2_3:46644830-46644849 | None:intergenic | 25.0% |
| !!! | TGCAACTTTTTTAGAAGATA+AGG | + | chr2_3:46644831-46644850 | None:intergenic | 25.0% |
| !!! | ATTGCCATTTTTTTAATAGG+GGG | - | chr2_3:46644914-46644933 | Msa0294650:CDS | 25.0% |
| !! | AAATTGAACTTCTTTTCTTG+AGG | - | chr2_3:46645039-46645058 | Msa0294650:intron | 25.0% |
| ! | ATAAAATCAATTTCTCCATG+AGG | + | chr2_3:46645098-46645117 | None:intergenic | 25.0% |
| ! | TATAGTGCTTATCATATAAG+TGG | + | chr2_3:46645186-46645205 | None:intergenic | 25.0% |
| ! | ACTTATATGATAAGCACTAT+AGG | - | chr2_3:46645185-46645204 | Msa0294650:intron | 25.0% |
| ! | ATTAGGGTTATGTAAACTAT+GGG | + | chr2_3:46645221-46645240 | None:intergenic | 25.0% |
| ! | TATTAGGGTTATGTAAACTA+TGG | + | chr2_3:46645222-46645241 | None:intergenic | 25.0% |
| !! | TTTTGTTCATAGATTCCTTA+GGG | + | chr2_3:46645494-46645513 | None:intergenic | 25.0% |
| !! | ATTTTGTTCATAGATTCCTT+AGG | + | chr2_3:46645495-46645514 | None:intergenic | 25.0% |
| ! | ATCTATGAACAAAATGTATC+AGG | - | chr2_3:46645500-46645519 | Msa0294650:CDS | 25.0% |
| ! | TAACATATAACAATCATGTC+AGG | + | chr2_3:46645545-46645564 | None:intergenic | 25.0% |
| !! | AATAAGTTGAAAACAACTGA+TGG | - | chr2_3:46645723-46645742 | Msa0294650:intron | 25.0% |
| ! | ACTAATTTCATTGTCTTTGT+TGG | + | chr2_3:46646240-46646259 | None:intergenic | 25.0% |
| !! | AGAATTTGAGTTTATCCATT+TGG | + | chr2_3:46646288-46646307 | None:intergenic | 25.0% |
| ! | GTTATTGAATGAAGGAATAA+GGG | + | chr2_3:46646362-46646381 | None:intergenic | 25.0% |
| ! | AGTTATTGAATGAAGGAATA+AGG | + | chr2_3:46646363-46646382 | None:intergenic | 25.0% |
| ! | TATTCCTTCATTCAATAACT+TGG | - | chr2_3:46646363-46646382 | Msa0294650:intron | 25.0% |
| ! | CATTCTCAAATTTAGAAACA+TGG | - | chr2_3:46646603-46646622 | Msa0294650:CDS | 25.0% |
| !!! | TTGATCAAGTGTTGAAAAAA+TGG | + | chr2_3:46646668-46646687 | None:intergenic | 25.0% |
| ! | GATGATTGTTTATTAGACAT+GGG | - | chr2_3:46646715-46646734 | Msa0294650:CDS | 25.0% |
| ! | TATTTGATAAGTGTTAGGTA+AGG | - | chr2_3:46647118-46647137 | Msa0294650:intron | 25.0% |
| ! | ACAAATACATTGTTTATCAG+TGG | - | chr2_3:46647349-46647368 | Msa0294650:intron | 25.0% |
| ! | TAATATAATTTAGGGATCCT+CGG | + | chr2_3:46647414-46647433 | None:intergenic | 25.0% |
| ! | AGAAACCTTCAAATTATTTG+AGG | + | chr2_3:46647710-46647729 | None:intergenic | 25.0% |
| ! | TATATATGAGAGATATCACT+TGG | - | chr2_3:46647848-46647867 | Msa0294650:CDS | 25.0% |
| ! | ATATATGAGAGATATCACTT+GGG | - | chr2_3:46647849-46647868 | Msa0294650:CDS | 25.0% |
| !! | GTATCTAATATCATTGGTTA+TGG | - | chr2_3:46647981-46648000 | Msa0294650:CDS | 25.0% |
| ! | AAAATCTAGATATGGTTCAT+TGG | - | chr2_3:46648145-46648164 | Msa0294650:five_prime_UTR | 25.0% |
| !!! | TATATTTTTTTGAGAGGTGG+TGG | + | chr2_3:46641076-46641095 | None:intergenic | 30.0% |
| AACTGAGAAAAGAGAAATAG+TGG | + | chr2_3:46641109-46641128 | None:intergenic | 30.0% | |
| ! | CCCAATAAATTGATTTCCAA+TGG | - | chr2_3:46641232-46641251 | Msa0294650:CDS | 30.0% |
| TGAATCTTCTTCTAATTCAG+AGG | - | chr2_3:46641330-46641349 | Msa0294650:CDS | 30.0% | |
| CCAAGAATGTTATTAGAACA+TGG | + | chr2_3:46641385-46641404 | None:intergenic | 30.0% | |
| CCATGTTCTAATAACATTCT+TGG | - | chr2_3:46641382-46641401 | Msa0294650:CDS | 30.0% | |
| !! | TATGAGTACTTGTTATTCCA+TGG | - | chr2_3:46641427-46641446 | Msa0294650:CDS | 30.0% |
| ATTCCATGGAGAATCATATT+TGG | - | chr2_3:46641441-46641460 | Msa0294650:CDS | 30.0% | |
| GAACAAATCTTCAAGATTCT+TGG | - | chr2_3:46641475-46641494 | Msa0294650:intron | 30.0% | |
| AAGAATTAAGGATTCAGGAA+GGG | + | chr2_3:46641542-46641561 | None:intergenic | 30.0% | |
| AAGCATACCAAGAAGAATTA+AGG | + | chr2_3:46641554-46641573 | None:intergenic | 30.0% | |
| TTGATATTGAGTAGCTATCT+AGG | + | chr2_3:46641611-46641630 | None:intergenic | 30.0% | |
| !! | TTCAATCCTTTTTGAAAACC+AGG | - | chr2_3:46641818-46641837 | Msa0294650:intron | 30.0% |
| ! | CGGTTTATAATTTTGTGAAC+CGG | + | chr2_3:46641874-46641893 | None:intergenic | 30.0% |
| TATACAGTTAAGAGGGAATA+GGG | + | chr2_3:46642356-46642375 | None:intergenic | 30.0% | |
| ATATACAGTTAAGAGGGAAT+AGG | + | chr2_3:46642357-46642376 | None:intergenic | 30.0% | |
| GATACCTCATATTCATCAAA+TGG | - | chr2_3:46642674-46642693 | Msa0294650:intron | 30.0% | |
| TCTTCCATTTGATGAATATG+AGG | + | chr2_3:46642681-46642700 | None:intergenic | 30.0% | |
| ! | AGAATAAAACAAGCTTTGAC+TGG | - | chr2_3:46642698-46642717 | Msa0294650:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr2_3:46643316-46643335 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr2_3:46643315-46643334 | None:intergenic | 30.0% |
| CAGTGCAGAAAAACAAAATT+AGG | + | chr2_3:46642902-46642921 | None:intergenic | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | + | chr2_3:46643161-46643180 | None:intergenic | 30.0% | |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr2_3:46643315-46643334 | Msa0294650:CDS | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr2_3:46643316-46643335 | Msa0294650:CDS | 30.0% |
| ACTTCATGTATGAAATGCAT+AGG | + | chr2_3:46643602-46643621 | None:intergenic | 30.0% | |
| AATGATGAGAGAAACTATCA+AGG | + | chr2_3:46643859-46643878 | None:intergenic | 30.0% | |
| TGCGATTTCCTACAATATTA+AGG | + | chr2_3:46644034-46644053 | None:intergenic | 30.0% | |
| ! | TATAGTAATTTGGAATTGGG+AGG | - | chr2_3:46644180-46644199 | Msa0294650:intron | 30.0% |
| !!! | AATCTTGTTTTCTCAATCTG+AGG | + | chr2_3:46644329-46644348 | None:intergenic | 30.0% |
| ATTATCATAAACTATCCTGG+AGG | + | chr2_3:46644631-46644650 | None:intergenic | 30.0% | |
| ! | TAGTTATCACTTCTTTAAGG+AGG | - | chr2_3:46644650-46644669 | Msa0294650:intron | 30.0% |
| ! | TTTAAGGAGGAGTTGTTATT+AGG | - | chr2_3:46644663-46644682 | Msa0294650:intron | 30.0% |
| !!! | GCAACATTTTAAAACTTAGG+GGG | + | chr2_3:46644706-46644725 | None:intergenic | 30.0% |
| CATATTTCCCTAAACATAAG+GGG | + | chr2_3:46644765-46644784 | None:intergenic | 30.0% | |
| GCATATTTCCCTAAACATAA+GGG | + | chr2_3:46644766-46644785 | None:intergenic | 30.0% | |
| AGCATATTTCCCTAAACATA+AGG | + | chr2_3:46644767-46644786 | None:intergenic | 30.0% | |
| CATATTTCTCTTATGTTAGG+GGG | + | chr2_3:46644797-46644816 | None:intergenic | 30.0% | |
| TTGACCCCCTATTAAAAAAA+TGG | + | chr2_3:46644921-46644940 | None:intergenic | 30.0% | |
| CATGATGAAGTACACTATTA+GGG | + | chr2_3:46645237-46645256 | None:intergenic | 30.0% | |
| ! | AAGTAAAAGAGTTGTTGCTT+GGG | - | chr2_3:46645310-46645329 | Msa0294650:intron | 30.0% |
| ! | CTTTTAACATGTCTGCTATT+TGG | + | chr2_3:46645368-46645387 | None:intergenic | 30.0% |
| !! | ACCAAAGAAGAATTTGTTAG+TGG | - | chr2_3:46645417-46645436 | Msa0294650:CDS | 30.0% |
| AGAAAAGAACGTGAATTGAA+GGG | - | chr2_3:46645879-46645898 | Msa0294650:intron | 30.0% | |
| AAGTCATGCTCAAAATGATA+TGG | - | chr2_3:46645923-46645942 | Msa0294650:intron | 30.0% | |
| !! | CTTTTGATAGCATCTTTATC+AGG | + | chr2_3:46645978-46645997 | None:intergenic | 30.0% |
| CTGATAAAGATGCTATCAAA+AGG | - | chr2_3:46645976-46645995 | Msa0294650:intron | 30.0% | |
| !! | AGTGAGAATGAATTTGTTGA+TGG | - | chr2_3:46646257-46646276 | Msa0294650:intron | 30.0% |
| AACTCAAATTCTAGTAAAGC+AGG | - | chr2_3:46646296-46646315 | Msa0294650:intron | 30.0% | |
| TATGCCAAGTTATTGAATGA+AGG | + | chr2_3:46646370-46646389 | None:intergenic | 30.0% | |
| TATTCACTAAAACACGACTA+TGG | - | chr2_3:46646388-46646407 | Msa0294650:intron | 30.0% | |
| ATGAGTCAAAAATTAAGTGG+TGG | - | chr2_3:46646545-46646564 | Msa0294650:CDS | 30.0% | |
| GGATGATTGTTTATTAGACA+TGG | - | chr2_3:46646714-46646733 | Msa0294650:CDS | 30.0% | |
| !!! | TTTTGAACACTTGCTATTAG+AGG | + | chr2_3:46646851-46646870 | None:intergenic | 30.0% |
| !! | CTCTAAAATTTGTAGCCAAA+GGG | + | chr2_3:46646925-46646944 | None:intergenic | 30.0% |
| !! | TCTCTAAAATTTGTAGCCAA+AGG | + | chr2_3:46646926-46646945 | None:intergenic | 30.0% |
| CTAAAACCATTTAGCAACAT+AGG | + | chr2_3:46647144-46647163 | None:intergenic | 30.0% | |
| ! | CTTCTTCACTATTTTATCCT+TGG | - | chr2_3:46647378-46647397 | Msa0294650:intron | 30.0% |
| GTGTTTATGAACAACATTCT+TGG | - | chr2_3:46647802-46647821 | Msa0294650:CDS | 30.0% | |
| GCAATTGTTTGTATTGTGAT+GGG | - | chr2_3:46647898-46647917 | Msa0294650:CDS | 30.0% | |
| ! | TTAGATACAAGAGGTATGTT+GGG | + | chr2_3:46647969-46647988 | None:intergenic | 30.0% |
| ! | ATTAGATACAAGAGGTATGT+TGG | + | chr2_3:46647970-46647989 | None:intergenic | 30.0% |
| CCAATGATATTAGATACAAG+AGG | + | chr2_3:46647978-46647997 | None:intergenic | 30.0% | |
| CCTCTTGTATCTAATATCAT+TGG | - | chr2_3:46647975-46647994 | Msa0294650:CDS | 30.0% | |
| TTGAACATCATCAACTCCAT+TGG | + | chr2_3:46641251-46641270 | None:intergenic | 35.0% | |
| ! | GCTAGTGCTTTTGATATTCT+TGG | - | chr2_3:46641514-46641533 | Msa0294650:intron | 35.0% |
| GAAGAATTAAGGATTCAGGA+AGG | + | chr2_3:46641543-46641562 | None:intergenic | 35.0% | |
| CCAAGAAGAATTAAGGATTC+AGG | + | chr2_3:46641547-46641566 | None:intergenic | 35.0% | |
| CCTGAATCCTTAATTCTTCT+TGG | - | chr2_3:46641544-46641563 | Msa0294650:intron | 35.0% | |
| !!! | TGGCATCACCTTTATTTTAG+TGG | + | chr2_3:46642174-46642193 | None:intergenic | 35.0% |
| CGTAGTAAGACGTGTATTAA+GGG | + | chr2_3:46642755-46642774 | None:intergenic | 35.0% | |
| ACGTAGTAAGACGTGTATTA+AGG | + | chr2_3:46642756-46642775 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | + | chr2_3:46643300-46643319 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | - | chr2_3:46643300-46643319 | Msa0294650:CDS | 35.0% | |
| GATAGGTTATGGCATTACTA+TGG | - | chr2_3:46643725-46643744 | Msa0294650:intron | 35.0% | |
| GGATATAGACACTAGAAAGA+TGG | - | chr2_3:46643746-46643765 | Msa0294650:CDS | 35.0% | |
| TAGAAAGATGGCAAGAATCA+TGG | - | chr2_3:46643758-46643777 | Msa0294650:CDS | 35.0% | |
| CATCTCATACTTCATTTACC+AGG | - | chr2_3:46643893-46643912 | Msa0294650:CDS | 35.0% | |
| AACTGATGCAATCTCAATCT+CGG | - | chr2_3:46644063-46644082 | Msa0294650:intron | 35.0% | |
| TAAAGAGCTGCATATTTCGT+TGG | + | chr2_3:46644304-46644323 | None:intergenic | 35.0% | |
| CTAATGTAGCTGCCATAAAT+GGG | - | chr2_3:46644441-46644460 | Msa0294650:intron | 35.0% | |
| AAATCTGACTCACCCATTTA+TGG | + | chr2_3:46644456-46644475 | None:intergenic | 35.0% | |
| AAAAGTGACCCCTTATGTTT+AGG | - | chr2_3:46644754-46644773 | Msa0294650:intron | 35.0% | |
| AAAGTGACCCCTTATGTTTA+GGG | - | chr2_3:46644755-46644774 | Msa0294650:intron | 35.0% | |
| !!! | ATCGCAACATTTTGAAACCT+AGG | - | chr2_3:46644942-46644961 | Msa0294650:intron | 35.0% |
| GCATGATGAAGTACACTATT+AGG | + | chr2_3:46645238-46645257 | None:intergenic | 35.0% | |
| AATAGTGTACTTCATCATGC+AGG | - | chr2_3:46645238-46645257 | Msa0294650:intron | 35.0% | |
| TACCATGAATTCAGTCAACA+TGG | - | chr2_3:46645264-46645283 | Msa0294650:intron | 35.0% | |
| ACCATGAATTCAGTCAACAT+GGG | - | chr2_3:46645265-46645284 | Msa0294650:intron | 35.0% | |
| GAAGTAAAAGAGTTGTTGCT+TGG | - | chr2_3:46645309-46645328 | Msa0294650:intron | 35.0% | |
| GCCACTAACAAATTCTTCTT+TGG | + | chr2_3:46645421-46645440 | None:intergenic | 35.0% | |
| TAACCAAACAAAGCATGCTT+TGG | - | chr2_3:46645455-46645474 | Msa0294650:CDS | 35.0% | |
| ! | TATCCAAAGCATGCTTTGTT+TGG | + | chr2_3:46645461-46645480 | None:intergenic | 35.0% |
| ! | AACAGACTTTTATCAAGCCA+TGG | - | chr2_3:46645844-46645863 | Msa0294650:intron | 35.0% |
| GAGAAAAGAACGTGAATTGA+AGG | - | chr2_3:46645878-46645897 | Msa0294650:intron | 35.0% | |
| ! | TTGAAGGGACATCTTATTTC+TGG | - | chr2_3:46645894-46645913 | Msa0294650:intron | 35.0% |
| CATGCTCAAAATGATATGGT+TGG | - | chr2_3:46645927-46645946 | Msa0294650:intron | 35.0% | |
| CTCAAAATGATATGGTTGGT+AGG | - | chr2_3:46645931-46645950 | Msa0294650:intron | 35.0% | |
| GAATAACCTATTGCATCACA+AGG | + | chr2_3:46646087-46646106 | None:intergenic | 35.0% | |
| AGCTCAAAATCTTCTTCTCA+TGG | - | chr2_3:46646320-46646339 | Msa0294650:intron | 35.0% | |
| ATGGAAGAGAATCAAACCAA+AGG | - | chr2_3:46646755-46646774 | Msa0294650:intron | 35.0% | |
| TGGAAGAGAATCAAACCAAA+GGG | - | chr2_3:46646756-46646775 | Msa0294650:intron | 35.0% | |
| AGCTATAGCATATGTGATGT+TGG | - | chr2_3:46646796-46646815 | Msa0294650:intron | 35.0% | |
| GCTATAGCATATGTGATGTT+GGG | - | chr2_3:46646797-46646816 | Msa0294650:intron | 35.0% | |
| !! | TCAAAAATTCTCTGAAGCTG+CGG | - | chr2_3:46646865-46646884 | Msa0294650:intron | 35.0% |
| !! | CTCTTTCATTTTAGTCCCTT+TGG | - | chr2_3:46646907-46646926 | Msa0294650:intron | 35.0% |
| TACTTCTCACACAATGTATG+AGG | - | chr2_3:46646991-46647010 | Msa0294650:intron | 35.0% | |
| TTTGGGTCATTGCAGATTTA+TGG | - | chr2_3:46647775-46647794 | Msa0294650:CDS | 35.0% | |
| ! | GGAATTTTCAGCTGATGTAT+TGG | - | chr2_3:46647870-46647889 | Msa0294650:CDS | 35.0% |
| ! | ATTTTCAGCTGATGTATTGG+TGG | - | chr2_3:46647873-46647892 | Msa0294650:CDS | 35.0% |
| GGCAATTGTTTGTATTGTGA+TGG | - | chr2_3:46647897-46647916 | Msa0294650:CDS | 35.0% | |
| AAAAGTGGAACGAAAACTAG+TGG | + | chr2_3:46647929-46647948 | None:intergenic | 35.0% | |
| TGTCTGATAGTCAGAATGTA+TGG | - | chr2_3:46648175-46648194 | Msa0294650:five_prime_UTR | 35.0% | |
| CAGCCAAATATGATTCTCCA+TGG | + | chr2_3:46641447-46641466 | None:intergenic | 40.0% | |
| ATCTTCAAGATTCTTGGTCC+AGG | - | chr2_3:46641481-46641500 | Msa0294650:intron | 40.0% | |
| ! | ATTCTTGGTCCAGGTGTTTT+TGG | - | chr2_3:46641490-46641509 | Msa0294650:intron | 40.0% |
| ACTTAAACTCTCAGCAGACT+TGG | - | chr2_3:46641722-46641741 | Msa0294650:intron | 40.0% | |
| !! | TATTCTAGTTTGGCCTCTAC+CGG | + | chr2_3:46642216-46642235 | None:intergenic | 40.0% |
| GTTAAGAGGGAATAGGGATA+GGG | + | chr2_3:46642350-46642369 | None:intergenic | 40.0% | |
| AGTTAAGAGGGAATAGGGAT+AGG | + | chr2_3:46642351-46642370 | None:intergenic | 40.0% | |
| !! | TGTTTGTTGTTGTCAGTCAC+TGG | - | chr2_3:46642503-46642522 | Msa0294650:CDS | 40.0% |
| ! | CACTGGACTTTCAAGTGATA+AGG | - | chr2_3:46642520-46642539 | Msa0294650:intron | 40.0% |
| TTGCTTGCCAACAATAACAC+AGG | + | chr2_3:46642627-46642646 | None:intergenic | 40.0% | |
| GAGTAGGAATCTGCATTATG+AGG | + | chr2_3:46643803-46643822 | None:intergenic | 40.0% | |
| GTAGAGAAAGAGAACAGAGT+AGG | + | chr2_3:46643819-46643838 | None:intergenic | 40.0% | |
| ! | CAAATAGGAGTGTGTGAATG+GGG | + | chr2_3:46643921-46643940 | None:intergenic | 40.0% |
| ! | GCAAATAGGAGTGTGTGAAT+GGG | + | chr2_3:46643922-46643941 | None:intergenic | 40.0% |
| ! | TGCAAATAGGAGTGTGTGAA+TGG | + | chr2_3:46643923-46643942 | None:intergenic | 40.0% |
| !! | GAGTTTGCTTTTCAACACGT+TGG | + | chr2_3:46644391-46644410 | None:intergenic | 40.0% |
| TCTACAAAAGATCCTAGCTG+AGG | - | chr2_3:46644409-46644428 | Msa0294650:intron | 40.0% | |
| CCATTTATGGCAGCTACATT+AGG | + | chr2_3:46644443-46644462 | None:intergenic | 40.0% | |
| CCTAATGTAGCTGCCATAAA+TGG | - | chr2_3:46644440-46644459 | Msa0294650:intron | 40.0% | |
| AATGGGTGAGTCAGATTTCA+TGG | - | chr2_3:46644458-46644477 | Msa0294650:intron | 40.0% | |
| TATCCTGGAGGAGAGTTTAT+GGG | + | chr2_3:46644619-46644638 | None:intergenic | 40.0% | |
| ! | TTGCAATTATGGCCCTGTTT+TGG | - | chr2_3:46644846-46644865 | Msa0294650:CDS | 40.0% |
| ! | TGCAATTATGGCCCTGTTTT+GGG | - | chr2_3:46644847-46644866 | Msa0294650:CDS | 40.0% |
| !!! | GCAACATTTTGAAACCTAGG+AGG | - | chr2_3:46644945-46644964 | Msa0294650:intron | 40.0% |
| !! | CACTAATGGCCATTTTCAAC+TGG | - | chr2_3:46645005-46645024 | Msa0294650:intron | 40.0% |
| ! | ATTTTCAACTGGCACATCGA+GGG | - | chr2_3:46645016-46645035 | Msa0294650:intron | 40.0% |
| CCATGAATTCAGTCAACATG+GGG | - | chr2_3:46645266-46645285 | Msa0294650:intron | 40.0% | |
| CATGAATTCAGTCAACATGG+GGG | - | chr2_3:46645267-46645286 | Msa0294650:intron | 40.0% | |
| GTCCTCTCTGATATTTGTGT+CGG | + | chr2_3:46645346-46645365 | None:intergenic | 40.0% | |
| TGTTCATAGATTCCTTAGGG+AGG | + | chr2_3:46645491-46645510 | None:intergenic | 40.0% | |
| TTTCTCACGTGTTCAATCCA+TGG | + | chr2_3:46645864-46645883 | None:intergenic | 40.0% | |
| ! | AGGTTATTCGAGCAAGTTGA+TGG | - | chr2_3:46646098-46646117 | Msa0294650:intron | 40.0% |
| CTAACTCGGATCTTGAAACA+TGG | + | chr2_3:46646136-46646155 | None:intergenic | 40.0% | |
| CCTCACTACTTTCTCTAACT+CGG | + | chr2_3:46646150-46646169 | None:intergenic | 40.0% | |
| CGAGTTAGAGAAAGTAGTGA+GGG | - | chr2_3:46646148-46646167 | Msa0294650:intron | 40.0% | |
| TGTTGGCATCAAGATCATGA+AGG | + | chr2_3:46646223-46646242 | None:intergenic | 40.0% | |
| !! | TTGTTGATGGCTTCACCAAA+TGG | - | chr2_3:46646270-46646289 | Msa0294650:intron | 40.0% |
| GGAAGATGTTGAGAAGGTAA+TGG | - | chr2_3:46646736-46646755 | Msa0294650:intron | 40.0% | |
| GGAAGAGAATCAAACCAAAG+GGG | - | chr2_3:46646757-46646776 | Msa0294650:intron | 40.0% | |
| ! | AATTGCTATGTTGTCGCTTC+TGG | - | chr2_3:46646820-46646839 | Msa0294650:intron | 40.0% |
| !! | CAAAAATTCTCTGAAGCTGC+GGG | - | chr2_3:46646866-46646885 | Msa0294650:intron | 40.0% |
| !! | ATATTGTAGTGGACTGAGAG+AGG | + | chr2_3:46647028-46647047 | None:intergenic | 40.0% |
| GTAAGGCCTATGTTGCTAAA+TGG | - | chr2_3:46647135-46647154 | Msa0294650:intron | 40.0% | |
| ! | TCCTTGGTTTAAAATCTCCG+AGG | - | chr2_3:46647394-46647413 | Msa0294650:intron | 40.0% |
| ! | TCCTCGGAGATTTTAAACCA+AGG | + | chr2_3:46647398-46647417 | None:intergenic | 40.0% |
| !! | GAACAACATTCTTGGCTTTG+TGG | - | chr2_3:46647810-46647829 | Msa0294650:CDS | 40.0% |
| ! | ATACAAGAGGTATGTTGGGA+AGG | + | chr2_3:46647965-46647984 | None:intergenic | 40.0% |
| GGAGAATCATATTTGGCTGC+TGG | - | chr2_3:46641448-46641467 | Msa0294650:CDS | 45.0% | |
| GAATCATATTTGGCTGCTGG+AGG | - | chr2_3:46641451-46641470 | Msa0294650:CDS | 45.0% | |
| ! | TCTCAGCAGACTTGGTAAGA+TGG | - | chr2_3:46641730-46641749 | Msa0294650:intron | 45.0% |
| ! | CTCAGCAGACTTGGTAAGAT+GGG | - | chr2_3:46641731-46641750 | Msa0294650:intron | 45.0% |
| ACATGCTAAATGTCCGGTAG+AGG | - | chr2_3:46642200-46642219 | Msa0294650:intron | 45.0% | |
| AGCTAACAATCCAACTCCAG+TGG | + | chr2_3:46642567-46642586 | None:intergenic | 45.0% | |
| ACTGGAGTTGGATTGTTAGC+TGG | - | chr2_3:46642566-46642585 | Msa0294650:intron | 45.0% | |
| GGAATCTGCATTATGAGGAG+TGG | + | chr2_3:46643798-46643817 | None:intergenic | 45.0% | |
| CAAAAGATCCTAGCTGAGGA+TGG | - | chr2_3:46644413-46644432 | Msa0294650:intron | 45.0% | |
| ATTCCCATAAACTCTCCTCC+AGG | - | chr2_3:46644613-46644632 | Msa0294650:intron | 45.0% | |
| CTATCCTGGAGGAGAGTTTA+TGG | + | chr2_3:46644620-46644639 | None:intergenic | 45.0% | |
| ! | GCAATTATGGCCCTGTTTTG+GGG | - | chr2_3:46644848-46644867 | Msa0294650:CDS | 45.0% |
| ! | TGGCGTCTTCTCAGCAATTT+TGG | - | chr2_3:46644875-46644894 | Msa0294650:CDS | 45.0% |
| ! | GGCGTCTTCTCAGCAATTTT+GGG | - | chr2_3:46644876-46644895 | Msa0294650:CDS | 45.0% |
| !!! | CAGCAATTTTGGGACGAAAG+CGG | - | chr2_3:46644886-46644905 | Msa0294650:CDS | 45.0% |
| CTCGATGTGCCAGTTGAAAA+TGG | + | chr2_3:46645017-46645036 | None:intergenic | 45.0% | |
| ! | CATTTTCAACTGGCACATCG+AGG | - | chr2_3:46645015-46645034 | Msa0294650:intron | 45.0% |
| ! | CCCCATGTTGACTGAATTCA+TGG | + | chr2_3:46645269-46645288 | None:intergenic | 45.0% |
| AGCCGACACAAATATCAGAG+AGG | - | chr2_3:46645341-46645360 | Msa0294650:intron | 45.0% | |
| !! | GGATAGAAAGTACCTCCCTA+AGG | - | chr2_3:46645476-46645495 | Msa0294650:CDS | 45.0% |
| GGTAGGATGCTCAATGATGA+TGG | - | chr2_3:46645948-46645967 | Msa0294650:intron | 45.0% | |
| CTTGCTCCTTGTGATGCAAT+AGG | - | chr2_3:46646078-46646097 | Msa0294650:intron | 45.0% | |
| CCGAGTTAGAGAAAGTAGTG+AGG | - | chr2_3:46646147-46646166 | Msa0294650:intron | 45.0% | |
| ! | GTAGTGAGGGAGACTCATTT+TGG | - | chr2_3:46646161-46646180 | Msa0294650:intron | 45.0% |
| !! | GAGGGAGACTCATTTTGGTA+AGG | - | chr2_3:46646166-46646185 | Msa0294650:intron | 45.0% |
| GACATGGGAAGATGTTGAGA+AGG | - | chr2_3:46646730-46646749 | Msa0294650:intron | 45.0% | |
| ! | GCTAGCTTCTTTGATTGCTG+AGG | + | chr2_3:46646954-46646973 | None:intergenic | 45.0% |
| ! | TTCAGCTGATGTATTGGTGG+TGG | - | chr2_3:46647876-46647895 | Msa0294650:CDS | 45.0% |
| !! | TTCGTTCCACTTTTCCTCTG+TGG | - | chr2_3:46647935-46647954 | Msa0294650:CDS | 45.0% |
| !! | AAAAGATTTAAAAAAAAAAA+TGG | + | chr2_3:46641793-46641812 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAAAATTACA+AGG | + | chr2_3:46642009-46642028 | None:intergenic | 5.0% |
| !!! | TATAAGTAATTTTTTTTTAT+AGG | - | chr2_3:46643255-46643274 | Msa0294650:intron | 5.0% |
| !!! | ATAAGTAATTTTTTTTTATA+GGG | - | chr2_3:46643256-46643275 | Msa0294650:intron | 5.0% |
| !!! | TTTTTTTTAAAATTTATGAT+AGG | - | chr2_3:46643708-46643727 | Msa0294650:intron | 5.0% |
| !!! | ATATTTTCTAATTTAAAAAA+GGG | + | chr2_3:46646418-46646437 | None:intergenic | 5.0% |
| !!! | TATATTTTCTAATTTAAAAA+AGG | + | chr2_3:46646419-46646438 | None:intergenic | 5.0% |
| !!! | AATAATTTTTTTTTTACAAA+TGG | - | chr2_3:46646686-46646705 | Msa0294650:CDS | 5.0% |
| !! | TATTCAAATAATATAATTTA+GGG | + | chr2_3:46647422-46647441 | None:intergenic | 5.0% |
| !! | ATATTCAAATAATATAATTT+AGG | + | chr2_3:46647423-46647442 | None:intergenic | 5.0% |
| !! | ATTATCAATAATTTATAAAT+AGG | - | chr2_3:46647487-46647506 | Msa0294650:intron | 5.0% |
| GCACTAGCACCAAAAACACC+TGG | + | chr2_3:46641502-46641521 | None:intergenic | 50.0% | |
| GAGTATGCTTCCACTGGAGT+TGG | - | chr2_3:46642554-46642573 | Msa0294650:intron | 50.0% | |
| CACAACTGTGAGAAGCAGGA+TGG | + | chr2_3:46642597-46642616 | None:intergenic | 50.0% | |
| TCCTGCTTCTCACAGTTGTG+TGG | - | chr2_3:46642597-46642616 | Msa0294650:intron | 50.0% | |
| CCTGCTTCTCACAGTTGTGT+GGG | - | chr2_3:46642598-46642617 | Msa0294650:intron | 50.0% | |
| CTGCTTCTCACAGTTGTGTG+GGG | - | chr2_3:46642599-46642618 | Msa0294650:intron | 50.0% | |
| TGCTTCTCACAGTTGTGTGG+GGG | - | chr2_3:46642600-46642619 | Msa0294650:intron | 50.0% | |
| ! | TGGGGGACCTGTGTTATTGT+TGG | - | chr2_3:46642617-46642636 | Msa0294650:intron | 50.0% |
| TAGGAGTTCCATCCTCAGCT+AGG | + | chr2_3:46644424-46644443 | None:intergenic | 50.0% | |
| ! | AACTGCACTTTTCGCCTCCT+AGG | + | chr2_3:46644962-46644981 | None:intergenic | 50.0% |
| ACGTGTGAGATGACACCTCA+TGG | - | chr2_3:46645080-46645099 | Msa0294650:intron | 50.0% | |
| !! | TTCGAGCAAGTTGATGGCGA+TGG | - | chr2_3:46646104-46646123 | Msa0294650:intron | 50.0% |
| TGGTAAGGCTGTAGATGCAG+AGG | - | chr2_3:46646181-46646200 | Msa0294650:intron | 50.0% | |
| AAACCAAAGGGGTGACTGCA+TGG | - | chr2_3:46646768-46646787 | Msa0294650:intron | 50.0% | |
| TAACCATGCAGTCACCCCTT+TGG | + | chr2_3:46646774-46646793 | None:intergenic | 50.0% | |
| GGATGTCCACAGAGGAAAAG+TGG | + | chr2_3:46647944-46647963 | None:intergenic | 50.0% | |
| ! | GCGCAAGAGTATGCTTCCAC+TGG | - | chr2_3:46642548-46642567 | Msa0294650:intron | 55.0% |
| CCCACACAACTGTGAGAAGC+AGG | + | chr2_3:46642601-46642620 | None:intergenic | 55.0% | |
| GTTGGGAAGGATGTCCACAG+AGG | + | chr2_3:46647952-46647971 | None:intergenic | 55.0% | |
| ! | GAGTGTGTGAATGGGGCACC+TGG | + | chr2_3:46643914-46643933 | None:intergenic | 60.0% |
| ACGCCACGTGCCCCAAAACA+GGG | + | chr2_3:46644861-46644880 | None:intergenic | 60.0% | |
| !!! | TGGCCCTGTTTTGGGGCACG+TGG | - | chr2_3:46644855-46644874 | Msa0294650:CDS | 65.0% |
| GACGCCACGTGCCCCAAAAC+AGG | + | chr2_3:46644862-46644881 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 46641059 | 46648204 | 46641059 | ID=Msa0294650;Name=Msa0294650 |
| chr2_3 | mRNA | 46641059 | 46648204 | 46641059 | ID=Msa0294650-mRNA-1;Parent=Msa0294650;Name=Msa0294650-mRNA-1;_AED=0.09;_eAED=0.09;_QI=92|1|1|1|0.88|0.7|10|89|713 |
| chr2_3 | exon | 46641059 | 46641120 | 46641059 | ID=Msa0294650-mRNA-1:exon:14571;Parent=Msa0294650-mRNA-1 |
| chr2_3 | exon | 46641198 | 46641473 | 46641198 | ID=Msa0294650-mRNA-1:exon:14570;Parent=Msa0294650-mRNA-1 |
| chr2_3 | exon | 46642251 | 46642532 | 46642251 | ID=Msa0294650-mRNA-1:exon:14569;Parent=Msa0294650-mRNA-1 |
| chr2_3 | exon | 46642911 | 46643163 | 46642911 | ID=Msa0294650-mRNA-1:exon:14568;Parent=Msa0294650-mRNA-1 |
| chr2_3 | exon | 46643266 | 46643414 | 46643266 | ID=Msa0294650-mRNA-1:exon:14567;Parent=Msa0294650-mRNA-1 |
| chr2_3 | exon | 46643742 | 46644003 | 46643742 | ID=Msa0294650-mRNA-1:exon:14566;Parent=Msa0294650-mRNA-1 |
| chr2_3 | exon | 46644801 | 46644946 | 46644801 | ID=Msa0294650-mRNA-1:exon:14565;Parent=Msa0294650-mRNA-1 |
| chr2_3 | exon | 46645349 | 46645533 | 46645349 | ID=Msa0294650-mRNA-1:exon:14564;Parent=Msa0294650-mRNA-1 |
| chr2_3 | exon | 46646544 | 46646744 | 46646544 | ID=Msa0294650-mRNA-1:exon:14563;Parent=Msa0294650-mRNA-1 |
| chr2_3 | exon | 46647698 | 46648204 | 46647698 | ID=Msa0294650-mRNA-1:exon:14562;Parent=Msa0294650-mRNA-1 |
| chr2_3 | five_prime_UTR | 46648113 | 46648204 | 46648113 | ID=Msa0294650-mRNA-1:five_prime_utr;Parent=Msa0294650-mRNA-1 |
| chr2_3 | CDS | 46647698 | 46648112 | 46647698 | ID=Msa0294650-mRNA-1:cds;Parent=Msa0294650-mRNA-1 |
| chr2_3 | CDS | 46646544 | 46646744 | 46646544 | ID=Msa0294650-mRNA-1:cds;Parent=Msa0294650-mRNA-1 |
| chr2_3 | CDS | 46645349 | 46645533 | 46645349 | ID=Msa0294650-mRNA-1:cds;Parent=Msa0294650-mRNA-1 |
| chr2_3 | CDS | 46644801 | 46644946 | 46644801 | ID=Msa0294650-mRNA-1:cds;Parent=Msa0294650-mRNA-1 |
| chr2_3 | CDS | 46643742 | 46644003 | 46643742 | ID=Msa0294650-mRNA-1:cds;Parent=Msa0294650-mRNA-1 |
| chr2_3 | CDS | 46643266 | 46643414 | 46643266 | ID=Msa0294650-mRNA-1:cds;Parent=Msa0294650-mRNA-1 |
| chr2_3 | CDS | 46642911 | 46643163 | 46642911 | ID=Msa0294650-mRNA-1:cds;Parent=Msa0294650-mRNA-1 |
| chr2_3 | CDS | 46642251 | 46642532 | 46642251 | ID=Msa0294650-mRNA-1:cds;Parent=Msa0294650-mRNA-1 |
| chr2_3 | CDS | 46641225 | 46641473 | 46641225 | ID=Msa0294650-mRNA-1:cds;Parent=Msa0294650-mRNA-1 |
| chr2_3 | three_prime_UTR | 46641198 | 46641224 | 46641198 | ID=Msa0294650-mRNA-1:three_prime_utr;Parent=Msa0294650-mRNA-1 |
| chr2_3 | three_prime_UTR | 46641059 | 46641120 | 46641059 | ID=Msa0294650-mRNA-1:three_prime_utr;Parent=Msa0294650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
