Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379580 | XP_003594245.1 | 91.646 | 407 | 29 | 2 | 1 | 407 | 1 | 402 | 0.0 | 731 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379580 | sp|Q9FGK4|B561J_ARATH | 53.315 | 362 | 156 | 5 | 32 | 389 | 25 | 377 | 3.69e-141 | 410 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379580 | G7IP86 | 91.646 | 407 | 29 | 2 | 1 | 407 | 1 | 402 | 0.0 | 731 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013280 | Msa1379580 | 0.816290 | 5.967875e-52 | -8.615850e-47 |
| Msa0062180 | Msa1379580 | 0.814099 | 1.830683e-51 | -8.615850e-47 |
| Msa0092410 | Msa1379580 | 0.802210 | 6.251026e-49 | -8.615850e-47 |
| Msa0106530 | Msa1379580 | 0.835683 | 1.454454e-56 | -8.615850e-47 |
| Msa1353890 | Msa1379580 | 0.819851 | 9.347740e-53 | -8.615850e-47 |
| Msa1367530 | Msa1379580 | 0.819110 | 1.379211e-52 | -8.615850e-47 |
| Msa1379580 | Msa1405820 | 0.810996 | 8.731090e-51 | -8.615850e-47 |
| Msa1379580 | Msa1408180 | 0.817377 | 3.402694e-52 | -8.615850e-47 |
| Msa1379580 | Msa1424630 | 0.849895 | 2.409831e-60 | -8.615850e-47 |
| Msa1379580 | Msa1430550 | 0.810600 | 1.063239e-50 | -8.615850e-47 |
| Msa1379580 | Msa1448980 | 0.815960 | 7.073854e-52 | -8.615850e-47 |
| Msa0697570 | Msa1379580 | 0.817503 | 3.187553e-52 | -8.615850e-47 |
| Msa0708310 | Msa1379580 | 0.804162 | 2.465300e-49 | -8.615850e-47 |
| Msa0827630 | Msa1379580 | 0.803297 | 3.729375e-49 | -8.615850e-47 |
| Msa0179100 | Msa1379580 | 0.801726 | 7.858446e-49 | -8.615850e-47 |
| Msa0377840 | Msa1379580 | 0.819970 | 8.781240e-53 | -8.615850e-47 |
| Msa0408340 | Msa1379580 | 0.812089 | 5.053003e-51 | -8.615850e-47 |
| Msa0420210 | Msa1379580 | 0.807799 | 4.236106e-50 | -8.615850e-47 |
| Msa0426560 | Msa1379580 | 0.814843 | 1.253397e-51 | -8.615850e-47 |
| Msa1043120 | Msa1379580 | 0.819329 | 1.230094e-52 | -8.615850e-47 |
| Msa0277410 | Msa1379580 | 0.953194 | 4.691238e-111 | -8.615850e-47 |
| Msa1200710 | Msa1379580 | 0.800205 | 1.607692e-48 | -8.615850e-47 |
| Msa1214170 | Msa1379580 | 0.803627 | 3.185597e-49 | -8.615850e-47 |
| Msa0511620 | Msa1379580 | 0.802479 | 5.501044e-49 | -8.615850e-47 |
| Msa0517610 | Msa1379580 | 0.819553 | 1.093424e-52 | -8.615850e-47 |
| Msa0524330 | Msa1379580 | 0.811592 | 6.483252e-51 | -8.615850e-47 |
| Msa0524440 | Msa1379580 | 0.806857 | 6.709099e-50 | -8.615850e-47 |
| Msa0580920 | Msa1379580 | 0.806473 | 8.086791e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379580 | MtrunA17_Chr2g0290131 | 91.646 | 407 | 29 | 2 | 1 | 407 | 1 | 402 | 0.0 | 731 |
| Msa1379580 | MtrunA17_Chr4g0076051 | 67.347 | 392 | 125 | 3 | 14 | 402 | 4 | 395 | 0.0 | 535 |
| Msa1379580 | MtrunA17_Chr2g0278181 | 69.608 | 306 | 91 | 2 | 99 | 402 | 1 | 306 | 3.46e-148 | 422 |
| Msa1379580 | MtrunA17_Chr7g0234191 | 41.687 | 403 | 215 | 10 | 5 | 402 | 49 | 436 | 1.71e-102 | 311 |
| Msa1379580 | MtrunA17_Chr3g0101961 | 39.782 | 367 | 205 | 8 | 29 | 389 | 21 | 377 | 6.42e-85 | 264 |
| Msa1379580 | MtrunA17_Chr5g0447771 | 33.509 | 379 | 227 | 8 | 40 | 401 | 64 | 434 | 1.12e-65 | 216 |
| Msa1379580 | MtrunA17_Chr5g0444651 | 35.550 | 391 | 222 | 15 | 10 | 383 | 12 | 389 | 1.43e-65 | 215 |
| Msa1379580 | MtrunA17_Chr8g0347591 | 38.049 | 205 | 117 | 4 | 175 | 379 | 183 | 377 | 1.48e-37 | 140 |
| Msa1379580 | MtrunA17_Chr7g0275621 | 27.577 | 388 | 237 | 13 | 19 | 391 | 26 | 384 | 3.73e-25 | 106 |
| Msa1379580 | MtrunA17_Chr8g0338731 | 28.723 | 188 | 129 | 3 | 10 | 197 | 7 | 189 | 2.72e-17 | 80.9 |
| Msa1379580 | MtrunA17_Chr7g0261921 | 39.806 | 103 | 61 | 1 | 99 | 200 | 1 | 103 | 2.17e-15 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379580 | AT5G47530.1 | 53.315 | 362 | 156 | 5 | 32 | 389 | 25 | 377 | 3.75e-142 | 410 |
| Msa1379580 | AT4G17280.1 | 50.378 | 397 | 182 | 7 | 9 | 400 | 10 | 396 | 7.94e-131 | 382 |
| Msa1379580 | AT5G35735.1 | 48.130 | 401 | 183 | 8 | 16 | 402 | 9 | 398 | 9.02e-119 | 351 |
| Msa1379580 | AT3G25290.1 | 43.223 | 391 | 196 | 12 | 19 | 395 | 13 | 391 | 5.57e-105 | 316 |
| Msa1379580 | AT3G25290.2 | 43.223 | 391 | 196 | 12 | 19 | 395 | 13 | 391 | 5.57e-105 | 316 |
| Msa1379580 | AT4G12980.1 | 42.338 | 385 | 201 | 7 | 18 | 390 | 13 | 388 | 2.02e-96 | 294 |
| Msa1379580 | AT3G59070.1 | 42.033 | 364 | 191 | 9 | 19 | 375 | 22 | 372 | 6.20e-83 | 261 |
| Msa1379580 | AT2G04850.1 | 34.828 | 379 | 218 | 10 | 40 | 399 | 29 | 397 | 2.30e-64 | 211 |
| Msa1379580 | AT5G48750.1 | 40.773 | 233 | 130 | 6 | 27 | 255 | 26 | 254 | 5.78e-54 | 180 |
| Msa1379580 | AT3G07570.1 | 37.278 | 169 | 98 | 2 | 212 | 380 | 207 | 367 | 4.97e-30 | 119 |
| Msa1379580 | AT3G61750.2 | 36.025 | 161 | 93 | 4 | 218 | 377 | 143 | 294 | 1.48e-24 | 103 |
| Msa1379580 | AT3G61750.1 | 36.025 | 161 | 93 | 4 | 218 | 377 | 220 | 371 | 2.53e-24 | 103 |
| Msa1379580 | AT3G07390.1 | 29.891 | 184 | 122 | 5 | 23 | 203 | 39 | 218 | 3.65e-17 | 81.6 |
| Msa1379580 | AT3G07390.2 | 44.737 | 76 | 39 | 1 | 32 | 107 | 48 | 120 | 1.95e-13 | 68.2 |
| Msa1379580 | AT4G18260.1 | 28.481 | 158 | 93 | 3 | 199 | 346 | 45 | 192 | 1.70e-11 | 65.1 |
| Msa1379580 | AT2G30890.1 | 26.471 | 170 | 115 | 3 | 216 | 380 | 54 | 218 | 2.95e-11 | 63.9 |
Find 127 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGATATAGATACTGGATTT+TGG | 0.220701 | tig0020280:-40374 | Msa1379580:three_prime_UTR |
| AGCATCATCAACATCTTTAA+AGG | 0.222620 | tig0020280:-40609 | Msa1379580:CDS |
| ATGCAACAAAATATACAAAA+AGG | 0.232567 | tig0020280:+40319 | None:intergenic |
| TATAGAGAGTTGGTGGGTTT+GGG | 0.254962 | tig0020280:+42776 | None:intergenic |
| TTATAGAGAGTTGGTGGGTT+TGG | 0.257611 | tig0020280:+42775 | None:intergenic |
| CTACTACTTTGGTTCATCTT+TGG | 0.263788 | tig0020280:-42137 | Msa1379580:CDS |
| GCCTATATAGTTGGTGTTGC+TGG | 0.268677 | tig0020280:-41260 | Msa1379580:CDS |
| TACTCAATCTAAGGAGAGTT+TGG | 0.289007 | tig0020280:-42058 | Msa1379580:CDS |
| CAGCAGATCGCTACGATAAC+TGG | 0.293780 | tig0020280:-40563 | Msa1379580:CDS |
| ATTGATGAAGTATAAGCTTT+AGG | 0.319882 | tig0020280:+42279 | None:intergenic |
| CTTCTGCCTTGGAACCCTTC+AGG | 0.326027 | tig0020280:-41159 | Msa1379580:intron |
| GGAACAAATGGTAATGGATA+TGG | 0.345134 | tig0020280:-40420 | Msa1379580:CDS |
| CAAAGCTTGTGCTCCATTCA+TGG | 0.345197 | tig0020280:+42329 | None:intergenic |
| CTTTAAAGGGTTTGATGCCT+TGG | 0.361855 | tig0020280:-40595 | Msa1379580:CDS |
| TCAACATGGTTGAGAACTTA+AGG | 0.372850 | tig0020280:-42626 | Msa1379580:exon |
| TCCTGTTGGAACTACTACTT+TGG | 0.373099 | tig0020280:-42148 | Msa1379580:CDS |
| CATGAATGGAGCACAAGCTT+TGG | 0.373312 | tig0020280:-42328 | Msa1379580:CDS |
| GAGAGTTTGGATCTTCGTTC+TGG | 0.374390 | tig0020280:-42045 | Msa1379580:CDS |
| AAGTGAAGAGGTTGTGAGAT+TGG | 0.376717 | tig0020280:+42731 | None:intergenic |
| ATGGTAATGGATATGGTTCT+AGG | 0.376964 | tig0020280:-40413 | Msa1379580:CDS |
| GGGTGGCGTTGCTGTACTTT+TGG | 0.394743 | tig0020280:-40508 | Msa1379580:CDS |
| CTACTGGAACCTTTACCATT+GGG | 0.394836 | tig0020280:-40658 | Msa1379580:CDS |
| TAGTGCTAATACTCAATCTA+AGG | 0.401924 | tig0020280:-42067 | Msa1379580:CDS |
| CACTGGCATTATTGCAGCAT+TGG | 0.406523 | tig0020280:-40529 | Msa1379580:CDS |
| TGGCAAGATGGTGCTATGTC+TGG | 0.406620 | tig0020280:-42117 | Msa1379580:CDS |
| GCTTATACTTCATCAATTGC+CGG | 0.410077 | tig0020280:-42273 | Msa1379580:CDS |
| GCATCATCAACATCTTTAAA+GGG | 0.412669 | tig0020280:-40608 | Msa1379580:CDS |
| CGTTCTGGTGCTTCTGAACA+AGG | 0.418467 | tig0020280:-42030 | Msa1379580:CDS |
| CATAGTGAAATCCTGGAGTA+TGG | 0.420412 | tig0020280:-40244 | Msa1379580:three_prime_UTR |
| TTGGTTCATCTTTGGCAAGA+TGG | 0.435669 | tig0020280:-42129 | Msa1379580:CDS |
| TAAAGGGTTTGATGCCTTGG+AGG | 0.436696 | tig0020280:-40592 | Msa1379580:CDS |
| ATTGGAGAGAGAGGAGGAAG+GGG | 0.438288 | tig0020280:+42749 | None:intergenic |
| TGGGGAGTCTTGATGCCGTT+GGG | 0.440117 | tig0020280:-41365 | Msa1379580:CDS |
| TTCATAGCATAGTGAAATCC+TGG | 0.444279 | tig0020280:-40251 | Msa1379580:three_prime_UTR |
| ACTGAGATAGATATAGATAC+TGG | 0.445998 | tig0020280:-40381 | Msa1379580:three_prime_UTR |
| TCAAGTCTGCAGACCCTGCT+TGG | 0.447998 | tig0020280:-41313 | Msa1379580:CDS |
| GAGTGTTTGTAGTATACTCT+TGG | 0.448168 | tig0020280:-40296 | Msa1379580:three_prime_UTR |
| AACAAGTTGCAAGGAATGAA+TGG | 0.449100 | tig0020280:-40441 | Msa1379580:CDS |
| AGATTGGAGAGAGAGGAGGA+AGG | 0.451634 | tig0020280:+42747 | None:intergenic |
| GATTGGAGAGAGAGGAGGAA+GGG | 0.457016 | tig0020280:+42748 | None:intergenic |
| TGGATATGGTTCTAGGGTGT+AGG | 0.460818 | tig0020280:-40406 | Msa1379580:exon |
| CAAGGAATGAATGGAACAAA+TGG | 0.462291 | tig0020280:-40432 | Msa1379580:CDS |
| TCCAGCAACACCAACTATAT+AGG | 0.465181 | tig0020280:+41259 | None:intergenic |
| GGTGTTGCTGGATGGGGTAC+CGG | 0.465931 | tig0020280:-41248 | Msa1379580:CDS |
| ATGAATGGAACAAATGGTAA+TGG | 0.468323 | tig0020280:-40426 | Msa1379580:CDS |
| ACTGGCATTATTGCAGCATT+GGG | 0.469702 | tig0020280:-40528 | Msa1379580:CDS |
| AGAGAGTTGGTGGGTTTGGG+TGG | 0.470809 | tig0020280:+42779 | None:intergenic |
| GGGTTATTATAGAGAGTTGG+TGG | 0.476197 | tig0020280:+42769 | None:intergenic |
| AAGGGGTTATTATAGAGAGT+TGG | 0.476615 | tig0020280:+42766 | None:intergenic |
| TATAGTTGGTGTTGCTGGAT+GGG | 0.478511 | tig0020280:-41255 | Msa1379580:CDS |
| CTCTCTGCTAATTGTGTCGC+TGG | 0.479571 | tig0020280:+42249 | None:intergenic |
| CAATCAGCTGCCTATATAGT+TGG | 0.479959 | tig0020280:-41269 | Msa1379580:CDS |
| TCTACTGGAACCTTTACCAT+TGG | 0.481797 | tig0020280:-40659 | Msa1379580:CDS |
| GAGTGCTAAATGCAATAAGC+TGG | 0.482103 | tig0020280:-41385 | Msa1379580:CDS |
| TTGTGTTGTTGTTTGTGCTA+AGG | 0.482521 | tig0020280:+42554 | None:intergenic |
| GGTGCTTCTGAACAAGGATC+AGG | 0.484364 | tig0020280:-42024 | Msa1379580:CDS |
| TATATAGGCAGCTGATTGGC+AGG | 0.484585 | tig0020280:+41274 | None:intergenic |
| GGTTGTGAGATTGGAGAGAG+AGG | 0.485045 | tig0020280:+42740 | None:intergenic |
| GGGATCATCATCTTCTGCCT+TGG | 0.486081 | tig0020280:-41170 | Msa1379580:CDS |
| GAAGATGTGAGATCCTTGTC+TGG | 0.487322 | tig0020280:+42351 | None:intergenic |
| CAACTATATAGGCAGCTGAT+TGG | 0.489184 | tig0020280:+41270 | None:intergenic |
| TGCTAATTGTGTCGCTGGAC+CGG | 0.489743 | tig0020280:+42254 | None:intergenic |
| ATCACAAAATCAGATTCTAC+TGG | 0.492868 | tig0020280:-40674 | Msa1379580:CDS |
| GATCTCACATCTTCCATGAA+TGG | 0.494534 | tig0020280:-42342 | Msa1379580:CDS |
| AACCTTTACCATTGGGGTGT+CGG | 0.496844 | tig0020280:-40651 | Msa1379580:CDS |
| ACCAAAGTAGTAGTTCCAAC+AGG | 0.497576 | tig0020280:+42147 | None:intergenic |
| ATATAGTTGGTGTTGCTGGA+TGG | 0.498343 | tig0020280:-41256 | Msa1379580:CDS |
| GATGATTATGTTATGCTACT+TGG | 0.501628 | tig0020280:+42668 | None:intergenic |
| CTGGGGAGTCTTGATGCCGT+TGG | 0.502768 | tig0020280:-41366 | Msa1379580:CDS |
| GGATATGGTTCTAGGGTGTA+GGG | 0.503228 | tig0020280:-40405 | Msa1379580:exon |
| ATCCGACACCCCAATGGTAA+AGG | 0.503836 | tig0020280:+40649 | None:intergenic |
| AAGCTCGGCAGTGACTCGGC+TGG | 0.510712 | tig0020280:-41221 | Msa1379580:CDS |
| GCAAGTATTACTCTTCCTGT+TGG | 0.510786 | tig0020280:-42162 | Msa1379580:CDS |
| TTAGGAGTTCCACTAGATTG+TGG | 0.518776 | tig0020280:+42297 | None:intergenic |
| ACACAAACCGATGGGTAGCA+TGG | 0.519624 | tig0020280:-42383 | Msa1379580:CDS |
| AACTCACCTCGTATCTCCAC+TGG | 0.522653 | tig0020280:-42464 | Msa1379580:CDS |
| TTATTGCATTTAGCACTCCA+TGG | 0.523173 | tig0020280:+41390 | None:intergenic |
| GTTGCAATTCCACAATCTAG+TGG | 0.528492 | tig0020280:-42306 | Msa1379580:CDS |
| ATAGTTGGTGTTGCTGGATG+GGG | 0.535576 | tig0020280:-41254 | Msa1379580:CDS |
| GGCATTATTGCAGCATTGGG+TGG | 0.536995 | tig0020280:-40525 | Msa1379580:CDS |
| TGGTAATGGATATGGTTCTA+GGG | 0.540128 | tig0020280:-40412 | Msa1379580:CDS |
| TGGGGTACCGGTCTCAAGCT+CGG | 0.540218 | tig0020280:-41236 | Msa1379580:CDS |
| TGAGGAGATTGAAAGTGAAG+AGG | 0.541064 | tig0020280:+42719 | None:intergenic |
| TATTGCATTTAGCACTCCAT+GGG | 0.546826 | tig0020280:+41391 | None:intergenic |
| CTCATACCTGAAGGGTTCCA+AGG | 0.549493 | tig0020280:+41153 | None:intergenic |
| AAATGATACAAAGTATCCAC+TGG | 0.549921 | tig0020280:+40202 | None:intergenic |
| ACATGAAGGTAAAACCAAGC+AGG | 0.551666 | tig0020280:+41299 | None:intergenic |
| AACTGGAAGCATGCGTACAC+TGG | 0.553041 | tig0020280:-40546 | Msa1379580:CDS |
| TCTCAAGCTCGGCAGTGACT+CGG | 0.553336 | tig0020280:-41225 | Msa1379580:CDS |
| TGTGATTGCAAGGTACTTGA+AGG | 0.556632 | tig0020280:-41339 | Msa1379580:CDS |
| TACTGGAACCTTTACCATTG+GGG | 0.558856 | tig0020280:-40657 | Msa1379580:CDS |
| GTCACTGCCGAGCTTGAGAC+CGG | 0.567277 | tig0020280:+41229 | None:intergenic |
| GGTTATTATAGAGAGTTGGT+GGG | 0.567435 | tig0020280:+42770 | None:intergenic |
| AGTGCTAAATGCAATAAGCT+GGG | 0.569932 | tig0020280:-41384 | Msa1379580:CDS |
| CACAAACCGATGGGTAGCAT+GGG | 0.570671 | tig0020280:-42382 | Msa1379580:CDS |
| CATGGATCATTGTGATCAAG+AGG | 0.572443 | tig0020280:-40476 | Msa1379580:CDS |
| TCGCCATGCTATTATTCCAG+TGG | 0.577374 | tig0020280:-40218 | Msa1379580:three_prime_UTR |
| TATTCAACTCATAGAACACT+CGG | 0.580467 | tig0020280:-41191 | Msa1379580:CDS |
| CATGGCGAAAACCATACTCC+AGG | 0.580782 | tig0020280:+40233 | None:intergenic |
| TGTGAGATTGGAGAGAGAGG+AGG | 0.580916 | tig0020280:+42743 | None:intergenic |
| GTAGCACTCAATCTTGAATG+AGG | 0.591825 | tig0020280:+42213 | None:intergenic |
| TGCTACACATGAAAATAATG+AGG | 0.596383 | tig0020280:-42196 | Msa1379580:CDS |
| TCTGAACAAGGATCAGGCGG+TGG | 0.598620 | tig0020280:-42018 | Msa1379580:CDS |
| GTATAACAAACACAAACCGA+TGG | 0.599459 | tig0020280:-42392 | Msa1379580:CDS |
| TGGAGATACGAGGTGAGTTG+TGG | 0.602619 | tig0020280:+42468 | None:intergenic |
| AAATCAGAGAACAAGTTGCA+AGG | 0.608640 | tig0020280:-40450 | Msa1379580:CDS |
| CGTTGGGAGCTGTGATTGCA+AGG | 0.616544 | tig0020280:-41349 | Msa1379580:CDS |
| TTGCGTATCCGACACCCCAA+TGG | 0.617721 | tig0020280:+40643 | None:intergenic |
| TAATAGCCCATGCTACCCAT+CGG | 0.617929 | tig0020280:+42376 | None:intergenic |
| ATCTGCTGCAGACACCTCCA+AGG | 0.621895 | tig0020280:+40578 | None:intergenic |
| GACATAGCATTCAGACACTC+AGG | 0.622339 | tig0020280:-42414 | Msa1379580:CDS |
| TATCCACTGGAATAATAGCA+TGG | 0.624226 | tig0020280:+40215 | None:intergenic |
| CTGATTGGCAGGTAACATGA+AGG | 0.627406 | tig0020280:+41285 | None:intergenic |
| CATGTAATCTCATACCTGAA+GGG | 0.631087 | tig0020280:+41145 | None:intergenic |
| TATAACAAACACAAACCGAT+GGG | 0.637410 | tig0020280:-42391 | Msa1379580:CDS |
| CATGAAGGTAAAACCAAGCA+GGG | 0.639212 | tig0020280:+41300 | None:intergenic |
| CTAGTCATATCATGTGCTTG+AGG | 0.649595 | tig0020280:+42087 | None:intergenic |
| TGGACATACGACCAAAACAC+AGG | 0.659662 | tig0020280:-42444 | Msa1379580:CDS |
| GTGCTAAATGCAATAAGCTG+GGG | 0.662810 | tig0020280:-41383 | Msa1379580:CDS |
| CTTGCAATCACAGCTCCCAA+CGG | 0.668115 | tig0020280:+41350 | None:intergenic |
| ATTCAACTCATAGAACACTC+GGG | 0.675546 | tig0020280:-41190 | Msa1379580:CDS |
| GCTTCTGAACAAGGATCAGG+CGG | 0.676930 | tig0020280:-42021 | Msa1379580:CDS |
| ATGTTGTTATGATTGAGATG+AGG | 0.696927 | tig0020280:+42595 | None:intergenic |
| AAGATGTGAGATCCTTGTCT+GGG | 0.704804 | tig0020280:+42352 | None:intergenic |
| ATGGGCTATTAACCCAGACA+AGG | 0.714059 | tig0020280:-42364 | Msa1379580:CDS |
| GTATGTCCAGTGGAGATACG+AGG | 0.728963 | tig0020280:+42458 | None:intergenic |
| ACACAACTTCACAAACAACG+AGG | 0.757587 | tig0020280:-42514 | Msa1379580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAACTACTAATAAAAT+TGG | + | tig0020280:41132-41151 | None:intergenic | 10.0% |
| !!! | ATAATCAAAGTTTTAAATTG+CGG | - | tig0020280:41062-41081 | Msa1379580:intron | 15.0% |
| !!! | AAATTGATTTTAGTTAAAGA+TGG | - | tig0020280:41271-41290 | Msa1379580:CDS | 15.0% |
| !!! | AATTGATTTTAGTTAAAGAT+GGG | - | tig0020280:41272-41291 | Msa1379580:CDS | 15.0% |
| !!! | AATATTTTTAATTGCATATG+TGG | - | tig0020280:41795-41814 | Msa1379580:intron | 15.0% |
| !!! | TAGTTTTTTTAGTGTTGATT+TGG | - | tig0020280:41142-41161 | Msa1379580:intron | 20.0% |
| !!! | TTGGATTTTATTTGGTAATT+TGG | - | tig0020280:41444-41463 | Msa1379580:intron | 20.0% |
| !! | CTATAAACTACTAATATACA+AGG | - | tig0020280:41917-41936 | Msa1379580:intron | 20.0% |
| !!! | TTATGAGTTTTATTGAGTTT+TGG | - | tig0020280:42541-42560 | Msa1379580:CDS | 20.0% |
| !! | TGCAACAAAATATACAAAAA+GGG | + | tig0020280:42574-42593 | None:intergenic | 20.0% |
| !! | ATGCAACAAAATATACAAAA+AGG | + | tig0020280:42575-42594 | None:intergenic | 20.0% |
| !!! | TTGGTTTTTGTTTTTGTGTT+GGG | + | tig0020280:40207-40226 | None:intergenic | 25.0% |
| ! | ATTGATGAAGTATAAGCTTT+AGG | + | tig0020280:40615-40634 | None:intergenic | 25.0% |
| ! | ATTATATCACCTTCAATCAA+AGG | - | tig0020280:40986-41005 | Msa1379580:intron | 25.0% |
| ! | TTATATCACCTTCAATCAAA+GGG | - | tig0020280:40987-41006 | Msa1379580:intron | 25.0% |
| !!! | TGAACTTTTTTCTGTCAAAT+TGG | - | tig0020280:41206-41225 | Msa1379580:CDS | 25.0% |
| !! | AAATTGGTGAATTGTTGTTA+AGG | - | tig0020280:41222-41241 | Msa1379580:CDS | 25.0% |
| !! | AAGAAGGTTTGGATTTTATT+TGG | - | tig0020280:41436-41455 | Msa1379580:intron | 25.0% |
| ! | GGTAATTTGGAAATTGATTA+AGG | - | tig0020280:41457-41476 | Msa1379580:intron | 25.0% |
| !!! | ATATACAAGGTTTTGAATTG+TGG | - | tig0020280:41930-41949 | Msa1379580:intron | 25.0% |
| !! | TAGATATAGATACTGGATTT+TGG | - | tig0020280:42517-42536 | Msa1379580:CDS | 25.0% |
| !!! | TGTGTTGGGTTTTTTTTATG+AGG | + | tig0020280:40193-40212 | None:intergenic | 30.0% |
| !!! | CTTGGTTTTTGTTTTTGTGT+TGG | + | tig0020280:40208-40227 | None:intergenic | 30.0% |
| GATGATTATGTTATGCTACT+TGG | + | tig0020280:40226-40245 | None:intergenic | 30.0% | |
| TTCCATCAAAAACATCAACA+TGG | - | tig0020280:40251-40270 | Msa1379580:three_prime_UTR | 30.0% | |
| !! | AACCATGTTGATGTTTTTGA+TGG | + | tig0020280:40256-40275 | None:intergenic | 30.0% |
| ATGTTGTTATGATTGAGATG+AGG | + | tig0020280:40299-40318 | None:intergenic | 30.0% | |
| TATAACAAACACAAACCGAT+GGG | - | tig0020280:40500-40519 | Msa1379580:CDS | 30.0% | |
| TGCTACACATGAAAATAATG+AGG | - | tig0020280:40695-40714 | Msa1379580:CDS | 30.0% | |
| TAGTGCTAATACTCAATCTA+AGG | - | tig0020280:40824-40843 | Msa1379580:intron | 30.0% | |
| !!! | TAATTTTTTGTTCAGACCCA+TGG | - | tig0020280:41484-41503 | Msa1379580:intron | 30.0% |
| TATTCAACTCATAGAACACT+CGG | - | tig0020280:41700-41719 | Msa1379580:intron | 30.0% | |
| TAAAAAAAGCAATGATGCTG+CGG | - | tig0020280:42040-42059 | Msa1379580:CDS | 30.0% | |
| ! | AAACTTTTCCTACTGAATAC+AGG | - | tig0020280:42164-42183 | Msa1379580:CDS | 30.0% |
| ! | CTGATTTTGTGATCTTTGTT+TGG | + | tig0020280:42210-42229 | None:intergenic | 30.0% |
| ATCACAAAATCAGATTCTAC+TGG | - | tig0020280:42217-42236 | Msa1379580:CDS | 30.0% | |
| AGCATCATCAACATCTTTAA+AGG | - | tig0020280:42282-42301 | Msa1379580:CDS | 30.0% | |
| GCATCATCAACATCTTTAAA+GGG | - | tig0020280:42283-42302 | Msa1379580:CDS | 30.0% | |
| ATGAATGGAACAAATGGTAA+TGG | - | tig0020280:42465-42484 | Msa1379580:CDS | 30.0% | |
| ACTGAGATAGATATAGATAC+TGG | - | tig0020280:42510-42529 | Msa1379580:CDS | 30.0% | |
| ! | AAATGATACAAAGTATCCAC+TGG | + | tig0020280:42692-42711 | None:intergenic | 30.0% |
| ! | GGTTATTATAGAGAGTTGGT+GGG | + | tig0020280:40124-40143 | None:intergenic | 35.0% |
| AAGGGGTTATTATAGAGAGT+TGG | + | tig0020280:40128-40147 | None:intergenic | 35.0% | |
| TCAACATGGTTGAGAACTTA+AGG | - | tig0020280:40265-40284 | Msa1379580:three_prime_UTR | 35.0% | |
| !! | TTGTGTTGTTGTTTGTGCTA+AGG | + | tig0020280:40340-40359 | None:intergenic | 35.0% |
| GTATAACAAACACAAACCGA+TGG | - | tig0020280:40499-40518 | Msa1379580:CDS | 35.0% | |
| GCTTATACTTCATCAATTGC+CGG | - | tig0020280:40618-40637 | Msa1379580:CDS | 35.0% | |
| ! | CTACTACTTTGGTTCATCTT+TGG | - | tig0020280:40754-40773 | Msa1379580:intron | 35.0% |
| TACTCAATCTAAGGAGAGTT+TGG | - | tig0020280:40833-40852 | Msa1379580:intron | 35.0% | |
| ACTATAGACCCTTTGATTGA+AGG | + | tig0020280:40998-41017 | None:intergenic | 35.0% | |
| !! | GTGATGGATCGTTAATATCA+CGG | - | tig0020280:41093-41112 | Msa1379580:intron | 35.0% |
| TCGTTAATATCACGGAGAAT+TGG | - | tig0020280:41101-41120 | Msa1379580:intron | 35.0% | |
| TTAGATGTTACGCAACAAGA+AGG | - | tig0020280:41420-41439 | Msa1379580:intron | 35.0% | |
| TATTGCATTTAGCACTCCAT+GGG | + | tig0020280:41503-41522 | None:intergenic | 35.0% | |
| TTATTGCATTTAGCACTCCA+TGG | + | tig0020280:41504-41523 | None:intergenic | 35.0% | |
| AGTGCTAAATGCAATAAGCT+GGG | - | tig0020280:41507-41526 | Msa1379580:intron | 35.0% | |
| ATTCAACTCATAGAACACTC+GGG | - | tig0020280:41701-41720 | Msa1379580:intron | 35.0% | |
| CATGTAATCTCATACCTGAA+GGG | + | tig0020280:41749-41768 | None:intergenic | 35.0% | |
| ACATGTAATCTCATACCTGA+AGG | + | tig0020280:41750-41769 | None:intergenic | 35.0% | |
| AGCAAAAACCTGTATTCAGT+AGG | + | tig0020280:42175-42194 | None:intergenic | 35.0% | |
| !! | TACTTTTGGAAGCTTACACA+TGG | - | tig0020280:42397-42416 | Msa1379580:CDS | 35.0% |
| AAATCAGAGAACAAGTTGCA+AGG | - | tig0020280:42441-42460 | Msa1379580:CDS | 35.0% | |
| AACAAGTTGCAAGGAATGAA+TGG | - | tig0020280:42450-42469 | Msa1379580:CDS | 35.0% | |
| CAAGGAATGAATGGAACAAA+TGG | - | tig0020280:42459-42478 | Msa1379580:CDS | 35.0% | |
| !! | GGAACAAATGGTAATGGATA+TGG | - | tig0020280:42471-42490 | Msa1379580:CDS | 35.0% |
| !! | ATGGTAATGGATATGGTTCT+AGG | - | tig0020280:42478-42497 | Msa1379580:CDS | 35.0% |
| !! | TGGTAATGGATATGGTTCTA+GGG | - | tig0020280:42479-42498 | Msa1379580:CDS | 35.0% |
| GAGTGTTTGTAGTATACTCT+TGG | - | tig0020280:42595-42614 | Msa1379580:CDS | 35.0% | |
| TTCATAGCATAGTGAAATCC+TGG | - | tig0020280:42640-42659 | Msa1379580:exon | 35.0% | |
| TATCCACTGGAATAATAGCA+TGG | + | tig0020280:42679-42698 | None:intergenic | 35.0% | |
| !! | TATAGAGAGTTGGTGGGTTT+GGG | + | tig0020280:40118-40137 | None:intergenic | 40.0% |
| !! | TTATAGAGAGTTGGTGGGTT+TGG | + | tig0020280:40119-40138 | None:intergenic | 40.0% |
| GGGTTATTATAGAGAGTTGG+TGG | + | tig0020280:40125-40144 | None:intergenic | 40.0% | |
| AAGTGAAGAGGTTGTGAGAT+TGG | + | tig0020280:40163-40182 | None:intergenic | 40.0% | |
| TGAGGAGATTGAAAGTGAAG+AGG | + | tig0020280:40175-40194 | None:intergenic | 40.0% | |
| ACACAACTTCACAAACAACG+AGG | - | tig0020280:40377-40396 | Msa1379580:three_prime_UTR | 40.0% | |
| ! | TGTCGAGTTTTCCTGTGTTT+TGG | + | tig0020280:40461-40480 | None:intergenic | 40.0% |
| AAGATGTGAGATCCTTGTCT+GGG | + | tig0020280:40542-40561 | None:intergenic | 40.0% | |
| GATCTCACATCTTCCATGAA+TGG | - | tig0020280:40549-40568 | Msa1379580:CDS | 40.0% | |
| GTTGCAATTCCACAATCTAG+TGG | - | tig0020280:40585-40604 | Msa1379580:CDS | 40.0% | |
| TTAGGAGTTCCACTAGATTG+TGG | + | tig0020280:40597-40616 | None:intergenic | 40.0% | |
| GTAGCACTCAATCTTGAATG+AGG | + | tig0020280:40681-40700 | None:intergenic | 40.0% | |
| GCAAGTATTACTCTTCCTGT+TGG | - | tig0020280:40729-40748 | Msa1379580:intron | 40.0% | |
| TCCTGTTGGAACTACTACTT+TGG | - | tig0020280:40743-40762 | Msa1379580:intron | 40.0% | |
| ACCAAAGTAGTAGTTCCAAC+AGG | + | tig0020280:40747-40766 | None:intergenic | 40.0% | |
| TTGGTTCATCTTTGGCAAGA+TGG | - | tig0020280:40762-40781 | Msa1379580:intron | 40.0% | |
| CTAGTCATATCATGTGCTTG+AGG | + | tig0020280:40807-40826 | None:intergenic | 40.0% | |
| TGTTACGCAACAAGAAGGTT+TGG | - | tig0020280:41425-41444 | Msa1379580:intron | 40.0% | |
| GAGTGCTAAATGCAATAAGC+TGG | - | tig0020280:41506-41525 | Msa1379580:intron | 40.0% | |
| GTGCTAAATGCAATAAGCTG+GGG | - | tig0020280:41508-41527 | Msa1379580:intron | 40.0% | |
| ! | TGTGATTGCAAGGTACTTGA+AGG | - | tig0020280:41552-41571 | Msa1379580:intron | 40.0% |
| CATGAAGGTAAAACCAAGCA+GGG | + | tig0020280:41594-41613 | None:intergenic | 40.0% | |
| ACATGAAGGTAAAACCAAGC+AGG | + | tig0020280:41595-41614 | None:intergenic | 40.0% | |
| CAACTATATAGGCAGCTGAT+TGG | + | tig0020280:41624-41643 | None:intergenic | 40.0% | |
| CAATCAGCTGCCTATATAGT+TGG | - | tig0020280:41622-41641 | Msa1379580:intron | 40.0% | |
| TCCAGCAACACCAACTATAT+AGG | + | tig0020280:41635-41654 | None:intergenic | 40.0% | |
| !! | ATATAGTTGGTGTTGCTGGA+TGG | - | tig0020280:41635-41654 | Msa1379580:intron | 40.0% |
| !! | TATAGTTGGTGTTGCTGGAT+GGG | - | tig0020280:41636-41655 | Msa1379580:intron | 40.0% |
| !!! | AAGGTTTTGAATTGTGGCTG+TGG | - | tig0020280:41936-41955 | Msa1379580:intron | 40.0% |
| TCAAAAGACGCATATCAGCA+AGG | + | tig0020280:42097-42116 | None:intergenic | 40.0% | |
| ! | AGGTTTTTGCTCTGCTATTG+AGG | - | tig0020280:42184-42203 | Msa1379580:CDS | 40.0% |
| TCTACTGGAACCTTTACCAT+TGG | - | tig0020280:42232-42251 | Msa1379580:CDS | 40.0% | |
| CTACTGGAACCTTTACCATT+GGG | - | tig0020280:42233-42252 | Msa1379580:CDS | 40.0% | |
| TACTGGAACCTTTACCATTG+GGG | - | tig0020280:42234-42253 | Msa1379580:CDS | 40.0% | |
| ! | CTTTAAAGGGTTTGATGCCT+TGG | - | tig0020280:42296-42315 | Msa1379580:CDS | 40.0% |
| ACTGGCATTATTGCAGCATT+GGG | - | tig0020280:42363-42382 | Msa1379580:CDS | 40.0% | |
| CATGGATCATTGTGATCAAG+AGG | - | tig0020280:42415-42434 | Msa1379580:CDS | 40.0% | |
| CATAGTGAAATCCTGGAGTA+TGG | - | tig0020280:42647-42666 | Msa1379580:five_prime_UTR | 40.0% | |
| !!! | TGTTTTGGTCGTATGTCCAG+TGG | + | tig0020280:40446-40465 | None:intergenic | 45.0% |
| TGGACATACGACCAAAACAC+AGG | - | tig0020280:40447-40466 | Msa1379580:CDS | 45.0% | |
| GACATAGCATTCAGACACTC+AGG | - | tig0020280:40477-40496 | Msa1379580:CDS | 45.0% | |
| TAATAGCCCATGCTACCCAT+CGG | + | tig0020280:40518-40537 | None:intergenic | 45.0% | |
| ! | ATGGGCTATTAACCCAGACA+AGG | - | tig0020280:40527-40546 | Msa1379580:CDS | 45.0% |
| GAAGATGTGAGATCCTTGTC+TGG | + | tig0020280:40543-40562 | None:intergenic | 45.0% | |
| CAAAGCTTGTGCTCCATTCA+TGG | + | tig0020280:40565-40584 | None:intergenic | 45.0% | |
| CATGAATGGAGCACAAGCTT+TGG | - | tig0020280:40563-40582 | Msa1379580:CDS | 45.0% | |
| GAGAGTTTGGATCTTCGTTC+TGG | - | tig0020280:40846-40865 | Msa1379580:intron | 45.0% | |
| AATTGCGGCTATGATCGTGA+TGG | - | tig0020280:41077-41096 | Msa1379580:intron | 45.0% | |
| CTGATTGGCAGGTAACATGA+AGG | + | tig0020280:41609-41628 | None:intergenic | 45.0% | |
| TATATAGGCAGCTGATTGGC+AGG | + | tig0020280:41620-41639 | None:intergenic | 45.0% | |
| !! | GCCTATATAGTTGGTGTTGC+TGG | - | tig0020280:41631-41650 | Msa1379580:intron | 45.0% |
| !! | ATAGTTGGTGTTGCTGGATG+GGG | - | tig0020280:41637-41656 | Msa1379580:intron | 45.0% |
| AACCTTTACCATTGGGGTGT+CGG | - | tig0020280:42240-42259 | Msa1379580:CDS | 45.0% | |
| TAAAGGGTTTGATGCCTTGG+AGG | - | tig0020280:42299-42318 | Msa1379580:CDS | 45.0% | |
| CACTGGCATTATTGCAGCAT+TGG | - | tig0020280:42362-42381 | Msa1379580:CDS | 45.0% | |
| !! | TGGATATGGTTCTAGGGTGT+AGG | - | tig0020280:42485-42504 | Msa1379580:CDS | 45.0% |
| !! | GGATATGGTTCTAGGGTGTA+GGG | - | tig0020280:42486-42505 | Msa1379580:CDS | 45.0% |
| TCGCCATGCTATTATTCCAG+TGG | - | tig0020280:42673-42692 | Msa1379580:five_prime_UTR | 45.0% | |
| ATTGGAGAGAGAGGAGGAAG+GGG | + | tig0020280:40145-40164 | None:intergenic | 50.0% | |
| GATTGGAGAGAGAGGAGGAA+GGG | + | tig0020280:40146-40165 | None:intergenic | 50.0% | |
| AGATTGGAGAGAGAGGAGGA+AGG | + | tig0020280:40147-40166 | None:intergenic | 50.0% | |
| TGTGAGATTGGAGAGAGAGG+AGG | + | tig0020280:40151-40170 | None:intergenic | 50.0% | |
| GGTTGTGAGATTGGAGAGAG+AGG | + | tig0020280:40154-40173 | None:intergenic | 50.0% | |
| TGGAGATACGAGGTGAGTTG+TGG | + | tig0020280:40426-40445 | None:intergenic | 50.0% | |
| AACTCACCTCGTATCTCCAC+TGG | - | tig0020280:40427-40446 | Msa1379580:CDS | 50.0% | |
| GTATGTCCAGTGGAGATACG+AGG | + | tig0020280:40436-40455 | None:intergenic | 50.0% | |
| ACACAAACCGATGGGTAGCA+TGG | - | tig0020280:40508-40527 | Msa1379580:CDS | 50.0% | |
| CACAAACCGATGGGTAGCAT+GGG | - | tig0020280:40509-40528 | Msa1379580:CDS | 50.0% | |
| ! | TGCTAATTGTGTCGCTGGAC+CGG | + | tig0020280:40640-40659 | None:intergenic | 50.0% |
| CTCTCTGCTAATTGTGTCGC+TGG | + | tig0020280:40645-40664 | None:intergenic | 50.0% | |
| !! | TGGCAAGATGGTGCTATGTC+TGG | - | tig0020280:40774-40793 | Msa1379580:intron | 50.0% |
| CGTTCTGGTGCTTCTGAACA+AGG | - | tig0020280:40861-40880 | Msa1379580:intron | 50.0% | |
| GGTGCTTCTGAACAAGGATC+AGG | - | tig0020280:40867-40886 | Msa1379580:intron | 50.0% | |
| GCTTCTGAACAAGGATCAGG+CGG | - | tig0020280:40870-40889 | Msa1379580:intron | 50.0% | |
| CTTGCAATCACAGCTCCCAA+CGG | + | tig0020280:41544-41563 | None:intergenic | 50.0% | |
| GGGATCATCATCTTCTGCCT+TGG | - | tig0020280:41721-41740 | Msa1379580:intron | 50.0% | |
| CTCATACCTGAAGGGTTCCA+AGG | + | tig0020280:41741-41760 | None:intergenic | 50.0% | |
| ATGATGCTGCGGTCAGATTG+TGG | - | tig0020280:42051-42070 | Msa1379580:CDS | 50.0% | |
| ATCCGACACCCCAATGGTAA+AGG | + | tig0020280:42245-42264 | None:intergenic | 50.0% | |
| CAGCAGATCGCTACGATAAC+TGG | - | tig0020280:42328-42347 | Msa1379580:CDS | 50.0% | |
| ! | AACTGGAAGCATGCGTACAC+TGG | - | tig0020280:42345-42364 | Msa1379580:CDS | 50.0% |
| ! | GGCATTATTGCAGCATTGGG+TGG | - | tig0020280:42366-42385 | Msa1379580:CDS | 50.0% |
| CATGGCGAAAACCATACTCC+AGG | + | tig0020280:42661-42680 | None:intergenic | 50.0% | |
| TCTGAACAAGGATCAGGCGG+TGG | - | tig0020280:40873-40892 | Msa1379580:intron | 55.0% | |
| TGGGGAGTCTTGATGCCGTT+GGG | - | tig0020280:41526-41545 | Msa1379580:intron | 55.0% | |
| CGTTGGGAGCTGTGATTGCA+AGG | - | tig0020280:41542-41561 | Msa1379580:intron | 55.0% | |
| TCAAGTCTGCAGACCCTGCT+TGG | - | tig0020280:41578-41597 | Msa1379580:intron | 55.0% | |
| TCTCAAGCTCGGCAGTGACT+CGG | - | tig0020280:41666-41685 | Msa1379580:intron | 55.0% | |
| CTTCTGCCTTGGAACCCTTC+AGG | - | tig0020280:41732-41751 | Msa1379580:intron | 55.0% | |
| TTGCGTATCCGACACCCCAA+TGG | + | tig0020280:42251-42270 | None:intergenic | 55.0% | |
| ATCTGCTGCAGACACCTCCA+AGG | + | tig0020280:42316-42335 | None:intergenic | 55.0% | |
| ! | GGGTGGCGTTGCTGTACTTT+TGG | - | tig0020280:42383-42402 | Msa1379580:CDS | 55.0% |
| CTGGGGAGTCTTGATGCCGT+TGG | - | tig0020280:41525-41544 | Msa1379580:intron | 60.0% | |
| !! | GGTGTTGCTGGATGGGGTAC+CGG | - | tig0020280:41643-41662 | Msa1379580:intron | 60.0% |
| !! | TGGGGTACCGGTCTCAAGCT+CGG | - | tig0020280:41655-41674 | Msa1379580:intron | 60.0% |
| GTCACTGCCGAGCTTGAGAC+CGG | + | tig0020280:41665-41684 | None:intergenic | 60.0% | |
| ! | AAGCTCGGCAGTGACTCGGC+TGG | - | tig0020280:41670-41689 | Msa1379580:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020280 | gene | 40115 | 42798 | 40115 | ID=Msa1379580;Name=Msa1379580 |
| tig0020280 | mRNA | 40115 | 42798 | 40115 | ID=Msa1379580-mRNA-1;Parent=Msa1379580;Name=Msa1379580-mRNA-1;_AED=0.11;_eAED=0.11;_QI=155|1|1|1|1|1|3|292|407 |
| tig0020280 | exon | 40115 | 40727 | 40115 | ID=Msa1379580-mRNA-1:exon:6670;Parent=Msa1379580-mRNA-1 |
| tig0020280 | exon | 41160 | 41414 | 41160 | ID=Msa1379580-mRNA-1:exon:6669;Parent=Msa1379580-mRNA-1 |
| tig0020280 | exon | 41996 | 42798 | 41996 | ID=Msa1379580-mRNA-1:exon:6668;Parent=Msa1379580-mRNA-1 |
| tig0020280 | five_prime_UTR | 42644 | 42798 | 42644 | ID=Msa1379580-mRNA-1:five_prime_utr;Parent=Msa1379580-mRNA-1 |
| tig0020280 | CDS | 41996 | 42643 | 41996 | ID=Msa1379580-mRNA-1:cds;Parent=Msa1379580-mRNA-1 |
| tig0020280 | CDS | 41160 | 41414 | 41160 | ID=Msa1379580-mRNA-1:cds;Parent=Msa1379580-mRNA-1 |
| tig0020280 | CDS | 40407 | 40727 | 40407 | ID=Msa1379580-mRNA-1:cds;Parent=Msa1379580-mRNA-1 |
| tig0020280 | three_prime_UTR | 40115 | 40406 | 40115 | ID=Msa1379580-mRNA-1:three_prime_utr;Parent=Msa1379580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
